Metagenome / Metatranscriptome Family F054798

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054798
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	42 residues
Representative Sequence	MIYLYLNETQRLAEIVAELVKLNMGVVAELHGDKWHIEVTK
Number of Associated Samples	94
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.42 %
% of genes near scaffold ends (potentially truncated)	21.58 %
% of genes from short scaffolds (< 2000 bps)	58.27 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (49.640 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (23.741 % of family members)
Environment Ontology (ENVO)	Unclassified (71.942 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (76.978 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.41% β-sheet: 7.32% Coil/Unstructured: 29.27%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00542	Ribosomal_L12	4.32
PF00149	Metallophos	2.88
PF00293	NUDIX	1.44
PF00156	Pribosyltran	1.44
PF12850	Metallophos_2	1.44
PF07963	N_methyl	1.44
PF01844	HNH	0.72
PF00085	Thioredoxin	0.72
PF00216	Bac_DNA_binding	0.72
PF03851	UvdE	0.72
PF13899	Thioredoxin_7	0.72
PF01128	IspD	0.72
PF12804	NTP_transf_3	0.72
PF06067	DUF932	0.72
PF04542	Sigma70_r2	0.72
PF02945	Endonuclease_7	0.72
PF00856	SET	0.72
PF02732	ERCC4	0.72
PF00478	IMPDH	0.72
PF01541	GIY-YIG	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0222	Ribosomal protein L7/L12	Translation, ribosomal structure and biogenesis [J]	4.32
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.72
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	0.72
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.72
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG1948	ERCC4-type crossover junction endonuclease	Replication, recombination and repair [L]	0.72
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	0.72
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	0.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Viruses	superkingdom	All Organisms → Viruses	25.90 %
cellular organisms	root	All Organisms → cellular organisms	24.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.32 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	5.76 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.16 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.16 %
Oligoflexia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.76 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.88 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	2.16 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1.44 %
Bdellovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	3.60 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	2.16 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.44 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.44 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	1.44 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	1.44 %
unclassified Bdellovibrionales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	3.60 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	2.16 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.44 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1.44 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	1.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.44 %
Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
unclassified Sphingobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales	3.60 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	2.16 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	1.44 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.44 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.44 %
Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.02 %
Sphingobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	3.60 %
Rickettsiales bacterium TMED131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	2.16 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1.44 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.44 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1.44 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.44 %
Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002408\|B570J29032_108964627	Not Available	553	Open in IMG/M
3300002408\|B570J29032_109038749	Not Available	574	Open in IMG/M
3300002408\|B570J29032_109297101	Not Available	677	Open in IMG/M
3300002408\|B570J29032_109358826	Not Available	711	Open in IMG/M
3300002408\|B570J29032_109916923	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	2559	Open in IMG/M
3300002835\|B570J40625_100008374	Not Available	18952	Open in IMG/M
3300002835\|B570J40625_100041885	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	6779	Open in IMG/M
3300002835\|B570J40625_100172408	All Organisms → Viruses → Predicted Viral	2410	Open in IMG/M
3300002835\|B570J40625_100518502	All Organisms → Viruses → Predicted Viral	1114	Open in IMG/M
3300002835\|B570J40625_100545323	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300002835\|B570J40625_100573076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	1040	Open in IMG/M
3300002835\|B570J40625_100685038	Not Available	921	Open in IMG/M
3300002835\|B570J40625_101170369	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300002835\|B570J40625_101185656	Not Available	640	Open in IMG/M
3300003490\|JGI25926J51410_1000617	All Organisms → cellular organisms → Bacteria	6377	Open in IMG/M
3300004775\|Ga0007798_10120952	Not Available	593	Open in IMG/M
3300005581\|Ga0049081_10013333	Not Available	3104	Open in IMG/M
3300005805\|Ga0079957_1002611	All Organisms → cellular organisms → Bacteria	15691	Open in IMG/M
3300005805\|Ga0079957_1003619	All Organisms → cellular organisms → Bacteria	13088	Open in IMG/M
3300005805\|Ga0079957_1037251	All Organisms → Viruses → Predicted Viral	3133	Open in IMG/M
3300005805\|Ga0079957_1037819	All Organisms → Viruses → Predicted Viral	3100	Open in IMG/M
3300005805\|Ga0079957_1110182	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300005805\|Ga0079957_1125390	Not Available	1349	Open in IMG/M
3300005805\|Ga0079957_1133428	Not Available	1290	Open in IMG/M
3300005805\|Ga0079957_1222806	Not Available	893	Open in IMG/M
3300005805\|Ga0079957_1231536	Not Available	869	Open in IMG/M
3300006641\|Ga0075471_10300156	Not Available	817	Open in IMG/M
3300007541\|Ga0099848_1144997	Not Available	882	Open in IMG/M
3300008114\|Ga0114347_1040981	Not Available	4023	Open in IMG/M
3300008117\|Ga0114351_1224342	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300008953\|Ga0104241_1000115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	6131	Open in IMG/M
3300008962\|Ga0104242_1017340	All Organisms → Viruses → Predicted Viral	1253	Open in IMG/M
3300009085\|Ga0105103_10776404	Not Available	555	Open in IMG/M
3300009151\|Ga0114962_10059188	Not Available	2493	Open in IMG/M
3300009151\|Ga0114962_10358372	Not Available	798	Open in IMG/M
3300009151\|Ga0114962_10726766	Not Available	506	Open in IMG/M
3300009154\|Ga0114963_10004340	All Organisms → cellular organisms → Bacteria	9740	Open in IMG/M
3300009154\|Ga0114963_10034038	All Organisms → Viruses → Predicted Viral	3342	Open in IMG/M
3300009154\|Ga0114963_10053433	Not Available	2572	Open in IMG/M
3300009159\|Ga0114978_10229439	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300009160\|Ga0114981_10599143	Not Available	586	Open in IMG/M
3300009161\|Ga0114966_10564326	Not Available	640	Open in IMG/M
3300009180\|Ga0114979_10264977	All Organisms → Viruses → Predicted Viral	1027	Open in IMG/M
3300009180\|Ga0114979_10295044	Not Available	964	Open in IMG/M
3300009182\|Ga0114959_10178129	All Organisms → Viruses → Predicted Viral	1113	Open in IMG/M
3300009182\|Ga0114959_10247471	Not Available	906	Open in IMG/M
3300009182\|Ga0114959_10255433	Not Available	887	Open in IMG/M
3300009470\|Ga0126447_1015308	All Organisms → Viruses → Predicted Viral	1936	Open in IMG/M
3300009684\|Ga0114958_10242141	Not Available	893	Open in IMG/M
3300010156\|Ga0068873_1003211	Not Available	1716	Open in IMG/M
3300010157\|Ga0114964_10002041	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	14330	Open in IMG/M
3300010334\|Ga0136644_10353534	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300011116\|Ga0151516_11212	All Organisms → cellular organisms → Bacteria	10727	Open in IMG/M
3300011995\|Ga0153800_1038994	Not Available	509	Open in IMG/M
3300012000\|Ga0119951_1001145	All Organisms → cellular organisms → Bacteria	16109	Open in IMG/M
3300012000\|Ga0119951_1004891	All Organisms → cellular organisms → Bacteria	6532	Open in IMG/M
3300012012\|Ga0153799_1018175	All Organisms → Viruses → Predicted Viral	1442	Open in IMG/M
3300012013\|Ga0153805_1024457	Not Available	1028	Open in IMG/M
3300012017\|Ga0153801_1013460	All Organisms → Viruses → Predicted Viral	1471	Open in IMG/M
3300012666\|Ga0157498_1022565	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300013004\|Ga0164293_10001807	Not Available	18013	Open in IMG/M
3300013006\|Ga0164294_10036624	All Organisms → Viruses → Predicted Viral	3891	Open in IMG/M
3300013295\|Ga0170791_14921098	Not Available	979	Open in IMG/M
3300014960\|Ga0134316_1033342	Not Available	584	Open in IMG/M
3300017766\|Ga0181343_1026242	All Organisms → Viruses → Predicted Viral	1778	Open in IMG/M
3300019784\|Ga0181359_1064755	All Organisms → Viruses → Predicted Viral	1393	Open in IMG/M
3300020155\|Ga0194050_1090619	Not Available	829	Open in IMG/M
3300020155\|Ga0194050_1207552	Not Available	534	Open in IMG/M
3300020157\|Ga0194049_1075073	Not Available	893	Open in IMG/M
3300020498\|Ga0208050_1001052	All Organisms → Viruses → Predicted Viral	3991	Open in IMG/M
3300020504\|Ga0208484_1002890	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2807	Open in IMG/M
3300020507\|Ga0208697_1003406	Not Available	2371	Open in IMG/M
3300020511\|Ga0208593_1019495	Not Available	786	Open in IMG/M
3300020514\|Ga0208202_1001335	Not Available	4858	Open in IMG/M
3300020515\|Ga0208234_1000162	Not Available	11025	Open in IMG/M
3300020519\|Ga0208223_1036367	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	607	Open in IMG/M
3300020521\|Ga0208482_1005502	All Organisms → Viruses → Predicted Viral	2117	Open in IMG/M
3300020541\|Ga0208359_1031769	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300020555\|Ga0208358_1061259	Not Available	538	Open in IMG/M
3300021079\|Ga0194055_10011826	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	5720	Open in IMG/M
3300021473\|Ga0194043_1270505	Not Available	546	Open in IMG/M
3300021961\|Ga0222714_10056623	All Organisms → Viruses → Predicted Viral	2678	Open in IMG/M
3300021961\|Ga0222714_10678339	Not Available	505	Open in IMG/M
3300022190\|Ga0181354_1004882	All Organisms → Viruses → Predicted Viral	3523	Open in IMG/M
3300022752\|Ga0214917_10003553	All Organisms → cellular organisms → Bacteria	17895	Open in IMG/M
3300022752\|Ga0214917_10020928	Not Available	5364	Open in IMG/M
3300023174\|Ga0214921_10000057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	202294	Open in IMG/M
3300023179\|Ga0214923_10000027	Not Available	184783	Open in IMG/M
3300023179\|Ga0214923_10002194	All Organisms → cellular organisms → Bacteria	26373	Open in IMG/M
3300023179\|Ga0214923_10004934	All Organisms → cellular organisms → Bacteria	15766	Open in IMG/M
3300023179\|Ga0214923_10160784	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300023184\|Ga0214919_10000037	Not Available	186542	Open in IMG/M
3300025687\|Ga0208019_1127474	Not Available	745	Open in IMG/M
3300025872\|Ga0208783_10248393	Not Available	721	Open in IMG/M
3300027608\|Ga0208974_1000441	Not Available	17324	Open in IMG/M
3300027659\|Ga0208975_1197101	Not Available	540	Open in IMG/M
3300027708\|Ga0209188_1000030	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	159358	Open in IMG/M
3300027708\|Ga0209188_1000680	Not Available	31577	Open in IMG/M
3300027708\|Ga0209188_1028102	All Organisms → Viruses → Predicted Viral	2733	Open in IMG/M
3300027708\|Ga0209188_1043406	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2043	Open in IMG/M
3300027712\|Ga0209499_1106609	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300027734\|Ga0209087_1026062	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2833	Open in IMG/M
3300027734\|Ga0209087_1080500	All Organisms → Viruses → Predicted Viral	1416	Open in IMG/M
3300027741\|Ga0209085_1000877	Not Available	20224	Open in IMG/M
3300027741\|Ga0209085_1012969	All Organisms → Viruses → Predicted Viral	4126	Open in IMG/M
3300027741\|Ga0209085_1023795	All Organisms → Viruses → Predicted Viral	2935	Open in IMG/M
3300027747\|Ga0209189_1020658	All Organisms → Viruses → Predicted Viral	3538	Open in IMG/M
3300027747\|Ga0209189_1239927	Not Available	728	Open in IMG/M
3300027749\|Ga0209084_1234166	Not Available	721	Open in IMG/M
3300027759\|Ga0209296_1261417	Not Available	706	Open in IMG/M
3300027777\|Ga0209829_10080825	All Organisms → Viruses → Predicted Viral	1622	Open in IMG/M
3300027793\|Ga0209972_10258724	Not Available	782	Open in IMG/M
3300028393\|Ga0304728_1020413	All Organisms → Viruses → Predicted Viral	3029	Open in IMG/M
3300029349\|Ga0238435_100041	All Organisms → cellular organisms → Bacteria	38701	Open in IMG/M
3300029930\|Ga0119944_1006624	Not Available	1833	Open in IMG/M
3300031758\|Ga0315907_11005531	Not Available	601	Open in IMG/M
3300031951\|Ga0315904_10000070	Not Available	157712	Open in IMG/M
3300031951\|Ga0315904_10183822	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	2072	Open in IMG/M
3300031963\|Ga0315901_11144542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium RIFOXYD1_FULL_55_31	531	Open in IMG/M
3300032116\|Ga0315903_10884223	Not Available	640	Open in IMG/M
3300033816\|Ga0334980_0002109	All Organisms → cellular organisms → Bacteria	9165	Open in IMG/M
3300033980\|Ga0334981_0044506	All Organisms → Viruses → Predicted Viral	2334	Open in IMG/M
3300033981\|Ga0334982_0506320	Not Available	533	Open in IMG/M
3300034012\|Ga0334986_0254175	Not Available	953	Open in IMG/M
3300034018\|Ga0334985_0718520	Not Available	538	Open in IMG/M
3300034062\|Ga0334995_0196502	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300034062\|Ga0334995_0280872	Not Available	1102	Open in IMG/M
3300034071\|Ga0335028_0661579	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	552	Open in IMG/M
3300034072\|Ga0310127_031089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium TMED131	2990	Open in IMG/M
3300034072\|Ga0310127_302159	Not Available	547	Open in IMG/M
3300034073\|Ga0310130_0012947	All Organisms → Viruses → Predicted Viral	2831	Open in IMG/M
3300034082\|Ga0335020_0016181	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4332	Open in IMG/M
3300034101\|Ga0335027_0170762	All Organisms → Viruses → Predicted Viral	1574	Open in IMG/M
3300034101\|Ga0335027_0887390	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → unclassified Sphingobacteriales → Sphingobacteriales bacterium	508	Open in IMG/M
3300034104\|Ga0335031_0514189	Not Available	725	Open in IMG/M
3300034122\|Ga0335060_0648898	Not Available	525	Open in IMG/M
3300034200\|Ga0335065_0412647	Not Available	826	Open in IMG/M
3300034280\|Ga0334997_0388250	Not Available	888	Open in IMG/M
3300034284\|Ga0335013_0002672	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.84%
Terrestrial	Environmental → Terrestrial	2.16%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.81%
Marine	Environmental → Aquatic → Marine	4.32%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.16%
Unclassified	Environmental → Aquatic → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	61.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	24.46%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.60%
Coastal	Environmental → Aquatic → Marine → Coastal	2.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Ice	Environmental → Aquatic → Freshwater → Ice	0.72%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	61.87%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	12.95%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	11.51%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	23.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	18.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	12.95%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.19%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	6.47%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	5.04%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	4.32%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.60%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.88%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.16%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	2.16%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.44%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.72%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.72%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.72%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.72%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300004775	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008953	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009470	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, surface; DNA IDBA-UD	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010156	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel2S_0400h metaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300011116	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Nov	Environmental	Open in IMG/M
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300014960	Surface water microbial communities from Bangladesh - BaraHaldiaSW0709	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020155	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-10m	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020504	Freshwater microbial communities from Lake Mendota, WI - 09AUG2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020507	Freshwater microbial communities from Lake Mendota, WI - 12SEP2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020511	Freshwater microbial communities from Lake Mendota, WI - 15JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020514	Freshwater microbial communities from Lake Mendota, WI - 27AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020515	Freshwater microbial communities from Lake Mendota, WI - 27SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020521	Freshwater microbial communities from Lake Mendota, WI - 26SEP2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020541	Freshwater microbial communities from Lake Mendota, WI - 26AUG2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020555	Freshwater microbial communities from Lake Mendota, WI - 10AUG2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021473	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-15m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300029349	Freshwater microbial communities from Iron Gate Dam, Klamath Basin, California, USA - IR103	Environmental	Open in IMG/M
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1089646271	3300002408	Freshwater	SMIYLYLNETQRLAEIVSELVKLNMGVVAELHGDKWWIEVTK*
B570J29032_1090387492	3300002408	Freshwater	MIYLNLNEIERLAEIVSELVKLGMSVTAELKYDRWQIEVYK*
B570J29032_1092971011	3300002408	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELRGNKWCI
B570J29032_1093588262	3300002408	Freshwater	MIYLYLNETEKLATIVAELVKLNMGVVAELHGNKWHIEVTQ*
B570J29032_1099169232	3300002408	Freshwater	MIYLYLNETQRLAEIVAELVKLNMDVVAELHGNKWHIEVSK*
B570J40625_10000837446	3300002835	Freshwater	MIYLYLNETQRLAEIVAELVKLNMGVVAELHGDRWHIEVTK*
B570J40625_1000418857	3300002835	Freshwater	MIYLYLNETQKLAEIVTELVKLNMGVVAELHGNKWHIEVTQ*
B570J40625_1001724083	3300002835	Freshwater	MIYLNINEIERLAEIVAELVKLDMTVIAELKGTKWSIEVTK*
B570J40625_1005185024	3300002835	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELRGNKWCIEVTK*
B570J40625_1005453232	3300002835	Freshwater	MIYLNINEIERLAEIVAELVKLNMCVVAELKGTKWSIEVTK*
B570J40625_1005730761	3300002835	Freshwater	MIYLYLNETQRLAEIVSELVKLNMSVVAELRGNKWCIEVTK*
B570J40625_1006850384	3300002835	Freshwater	MIYLYLNETEKLAEIVSELVKLGMGVVAELHGNKWHIEVTQ
B570J40625_1011703691	3300002835	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGDRWHIEVTK*
B570J40625_1011856562	3300002835	Freshwater	MIYLYLNETQRLAEIVAELTKLNMGVVAELHGNKWHIEVTN*
JGI25926J51410_10006176	3300003490	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVTAELKYDRWQIEVYK*
Ga0007798_101209522	3300004775	Freshwater	MIYLYLNETQKLAEIVAELVKLNMGVVAELHGNKWHIEVTQ*
Ga0049081_100133336	3300005581	Freshwater Lentic	MIYLNINEIERLAEIVSELVKLGMSVTAELKYDRWQIEVYK*
Ga0079957_10026116	3300005805	Lake	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGNKWHIEVTQ*
Ga0079957_100361936	3300005805	Lake	MIYINLNEIERLCEIVSYLTKMKMGVVAELKGTRWHIEVTN*
Ga0079957_103725111	3300005805	Lake	MIYLYLNETEKLAAIVAELVKLNMAVVAELHGNKWHIEVTT*
Ga0079957_10378192	3300005805	Lake	MIYLYLNETQRLAEIVAELVKLNMGVVAELHGDKWHIEVTK*
Ga0079957_11101822	3300005805	Lake	VIYLYLNETQRLAEIVAELVKLNMGVVAELHGNKWHIEVTT*
Ga0079957_11253902	3300005805	Lake	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGDKWHIEVTR*
Ga0079957_11334285	3300005805	Lake	MIYLNINEIERLAEIVAELVKLDMCVIAELKGTKWSIEVTK*
Ga0079957_12228062	3300005805	Lake	MIYLYLNETQRLAEIVAELVKLNMGVIAELHGDRWHIEITK*
Ga0079957_12315363	3300005805	Lake	MIYLYLNETEKLAAIVAELVKLNMGVVAELHGNKWHIEVTT*
Ga0075471_103001563	3300006641	Aqueous	MIYLNINEIDRLAWIVAELTKLKMGVVAELRGNKWHIEVTN*
Ga0099848_11449974	3300007541	Aqueous	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGNKWHIEVTT*
Ga0114347_104098114	3300008114	Freshwater, Plankton	MIYLYLNETEKLAEIVSELVKLGMGVVAELHGNKWHIEVTK*
Ga0114351_12243422	3300008117	Freshwater, Plankton	MIYLYLNETEKLAEIVSELVKLGMGVVAELHGNKWHIEVSK*
Ga0104241_10001154	3300008953	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGNRWHIEVTQ*
Ga0104242_10173402	3300008962	Freshwater	MIYLYINETQRLAEIVSELVKLNMGVVAELHGNKWHIEVTI*
Ga0105103_107764043	3300009085	Freshwater Sediment	MIYLYLNETQRLAEIVAELVKLNMGVVAELHGDKWHIEV
Ga0114962_100591884	3300009151	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWHIEVSKY*
Ga0114962_103583723	3300009151	Freshwater Lake	IENIMIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWQIEVYK*
Ga0114962_107267663	3300009151	Freshwater Lake	MIYLNINEIERLAEIVAELVKLDMTVIAELKGTKWSIEVTKG*
Ga0114963_1000434020	3300009154	Freshwater Lake	MIYLYLNETEKLAAIVAELVKLKMGVVAELHGNKWHIEVTQ*
Ga0114963_100340383	3300009154	Freshwater Lake	MIYLNINEIERLAEIVAELVKLNMTVVAELKGTKWSIEVTK*
Ga0114963_100534334	3300009154	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVTAELRGTKWHIEVTK*
Ga0114978_102294393	3300009159	Freshwater Lake	MIYLYLNETQRLAEIVAELTKLNMGVVAELHGNKWHIEVTQ*
Ga0114981_105991432	3300009160	Freshwater Lake	MIYLNINEIERLAEIVAELVKLDMCVVAELKGTKWSIEVTK*
Ga0114966_105643261	3300009161	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVTAELKYDRWQ
Ga0114979_102649771	3300009180	Freshwater Lake	MIYLYLNETEKLAAIVSELIKLNMGVVAELHGNKWHIEVTQ*
Ga0114979_102950442	3300009180	Freshwater Lake	MIYLNINEIERLAEIVAELVKLDMCVIAELKGTKWSIEVTKG*
Ga0114959_101781294	3300009182	Freshwater Lake	DIENIMIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWHIEVSKY*
Ga0114959_102474711	3300009182	Freshwater Lake	DIENIMIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWQIEVYK*
Ga0114959_102554334	3300009182	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVNAELKYDRW
Ga0126447_10153083	3300009470	Meromictic Pond	VLYTNSNKGENMIYLYLNETERLAEIVAELVKLNMGVVAELHGNKWHIEVTK*
Ga0114958_102421414	3300009684	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWQIEVYK*
Ga0068873_10032112	3300010156	Freshwater Lake	MIYINLNEIERLCEIVAYLTKMKMGVVAELKGTKWHIEVTN*
Ga0114964_100020419	3300010157	Freshwater Lake	MIYLNSNDFERLAAIVAELVKLNMSVVAELRGTKWVIEVTN*
Ga0136644_103535341	3300010334	Freshwater Lake	ETEKLAAIVAELVKLKMGVVAELHGNKWHIEVTQ*
Ga0151516_112124	3300011116	Freshwater	MIYLNLNEIERLCEIVAYLTKMKMGVVAELKGTKWHIEVTN*
Ga0153800_10389941	3300011995	Freshwater	VLYTNTNTGENMIYLYLNETQRLAEIVSELVKLNMSVVAELRGNKWCIEVTK*
Ga0119951_100114538	3300012000	Freshwater	MIYLYLNETQRLAEIVAELVKLNMAVVAELHGDRWHIEVSK*
Ga0119951_10048911	3300012000	Freshwater	MIYLNINEIERLAEIVAELVKLDMCVIAELKGTKWSIEV
Ga0153799_10181752	3300012012	Freshwater	MIYLNLNEIERLAEIVAELVKLGMSVTAELKYDRWQIEVYK*
Ga0153805_10244574	3300012013	Surface Ice	MIYLYLNETQRLAEIVSDLVKLNMGVVAELHGDRWHIEVTK*
Ga0153801_10134605	3300012017	Freshwater	MIYLYLNETEKLATIVAELVKLNMGVVAELHGDKWSIEVTQ*
Ga0157498_10225651	3300012666	Freshwater, Surface Ice	GENMIYLYLNETQRLAEIVSELVKLNMSVVAELRGNKWCIEVTK*
Ga0164293_1000180742	3300013004	Freshwater	VIYLYLNETQKLAEIVAELVKLNMGVVAELHGNKWHIEVTK*
Ga0164294_100366245	3300013006	Freshwater	MIYLNINEIERLAEIVAELVKLDMCVIAELKGTRWSIEVTK*
Ga0170791_149210983	3300013295	Freshwater	MIYLNINEIERLAEIVAELVKLGMSVTAELKYDRW
Ga0134316_10333422	3300014960	Surface Water	MIYVNVNEVDLLAEIVATLTKLGVCVFAELHGTKWHIEVSK*
Ga0181343_10262426	3300017766	Freshwater Lake	IYLYLNETERLAEIVAELVKLNMGVVAELHGNKWHIEVTK
Ga0181359_10647553	3300019784	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMGVTAELKYDRWQIEVYK
Ga0194050_10906194	3300020155	Anoxic Zone Freshwater	MIYLNINEIERLAEIVAELVKLDMTVIAELKGTKWSIEVTK
Ga0194050_12075521	3300020155	Anoxic Zone Freshwater	NINEIERLAEIVAELVKLGMSVNAELKDDRWHIEVTKY
Ga0194049_10750731	3300020157	Anoxic Zone Freshwater	MIYLNINEIERLAEIVAELVKLGMSVTAELRGTKWHIEVTE
Ga0208050_10010529	3300020498	Freshwater	MIYLYLNETQKLAEIVTELVKLNMGVVAELHGNKWHIEVTQ
Ga0208484_10028909	3300020504	Freshwater	MIYLYLNETQKLAEIVAELVKLNMGVVAELHGNKWHIEVTQ
Ga0208697_100340610	3300020507	Freshwater	MIYLYLNETQRLAEIVAELVKLNMGVVAELHGDRWHIEVTK
Ga0208593_10194952	3300020511	Freshwater	MIYLYLNETEKLATIVAELVKLNMGVVAELHGNKWHIEVTQ
Ga0208202_10013352	3300020514	Freshwater	MIYLNINEIERLAEIVAELVKLDMCVIAELKGTKWSIEVTK
Ga0208234_100016226	3300020515	Freshwater	MIYLNINEIERLAEIVAELVKLDMCVIAELKGTKWSIEVTKG
Ga0208223_10363672	3300020519	Freshwater	MIYLYLNETQRLAEIVAELVKLNMDVVAELHGNKWHIEVSK
Ga0208482_10055029	3300020521	Freshwater	MIYLYLNETEKLAAIVAELVKLNMGVVAELHGNKWHIEVTQ
Ga0208359_10317693	3300020541	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGDRWHIEVTK
Ga0208358_10612591	3300020555	Freshwater	EYMIYLNINEIERLAEIVAELVKLDMCVIAELKGTKWSIEVTK
Ga0194055_100118267	3300021079	Anoxic Zone Freshwater	MIYLNMNDVEGLAKIVAELVKLNMNVIVVESVNNKWQIEVTN
Ga0194043_12705053	3300021473	Anoxic Zone Freshwater	MIYLNINEIERLAEIVAELVKLDMTVIAELKGTKWSIEVT
Ga0222714_100566235	3300021961	Estuarine Water	MIYLNINEIDRLAWIVAELTKLKMGVVAELKGNKWHIEVTNS
Ga0222714_106783391	3300021961	Estuarine Water	MIYLNINEIDRLAWIVAELTKLKMGVVAELKGNKWHIEVTE
Ga0181354_10048824	3300022190	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVTAELKYDRWQIEVYK
Ga0214917_1000355322	3300022752	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGNRWHIEVTQ
Ga0214917_1002092817	3300022752	Freshwater	MIYLYLNETQRLAEIVSELVKLNMSVVAELRGNKWCIEVTK
Ga0214921_1000005713	3300023174	Freshwater	MIYLYLNETQKLAEIVAELVKLNIGVVAELHGNKWHIEVTQ
Ga0214923_10000027173	3300023179	Freshwater	MIYLYINETQRLAEIVSELVKLNMGVVAELHGNKWHIEVTI
Ga0214923_1000219416	3300023179	Freshwater	MIYLYLNETQKLAEIVSEFIKLNIGVIVELHGNKWHIEITK
Ga0214923_1000493429	3300023179	Freshwater	MIYLYLNETQRLAEIVSELVKLGMGVVAELHGDKWHIEVTK
Ga0214923_101607844	3300023179	Freshwater	MIYLYLNETQRLAEIVSELIKLKMGVVAELHGDRWHIEVTK
Ga0214919_10000037184	3300023184	Freshwater	MIYLNLNDIERLAEIVAELVKLDMTVIAELKGTKWSIEVTK
Ga0208019_11274742	3300025687	Aqueous	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGNKWHIEVTT
Ga0208783_102483932	3300025872	Aqueous	MIYLNINEIDRLAWIVAELTKLKMGVVAELRGNKWHIEVTN
Ga0208974_100044141	3300027608	Freshwater Lentic	MIYLNINEIERLAEIVSELVKLGMSVTAELKYDRWQIEVYK
Ga0208975_11971012	3300027659	Freshwater Lentic	LYTNTNTGENMIYLYLNETQRLAEIVSELVKLNMSVVAELRGNKWCIEVTK
Ga0209188_1000030186	3300027708	Freshwater Lake	MIYLNINEIERLAEIVAELVKLNMCVVAELKGTKWSIEVTK
Ga0209188_10006801	3300027708	Freshwater Lake	VGKDDIENIMIYLNINEIERLAEIVAELVKLGMSVNAELKYDRW
Ga0209188_102810210	3300027708	Freshwater Lake	DDIENIMIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWHIEVSKY
Ga0209188_10434066	3300027708	Freshwater Lake	DDIENIMIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWQIEVYK
Ga0209499_11066092	3300027712	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWHIEVSKY
Ga0209087_10260625	3300027734	Freshwater Lake	VGKDDTEDIMIYLNINEIERLAEIVAELVKLGMSVTAELKYDRWQIEVYK
Ga0209087_10805006	3300027734	Freshwater Lake	NINEIERLAEIVAELVKLDMCVIAELKGTKWSIEVTK
Ga0209085_10008774	3300027741	Freshwater Lake	MIYLNINEIERLAEIVAELVKLGMSVTAELRGTKWHIEVTK
Ga0209085_10129692	3300027741	Freshwater Lake	MIYLYLNETEKLAAIVAELVKLKMGVVAELHGNKWHIEVTQ
Ga0209085_10237957	3300027741	Freshwater Lake	MIYLNINEIERLAEIVAELVKLNMTVVAELKGTKWSIEVTK
Ga0209189_10206584	3300027747	Freshwater Lake	MIYLNINEIERLAEIVAELVKLDMTVIAELKGTKWSIEVTKG
Ga0209189_12399273	3300027747	Freshwater Lake	PRNSYAGGLEMIYLNINEIERLAEIVAELVKLNMCVVAELKGTKWSIEVTK
Ga0209084_12341661	3300027749	Freshwater Lake	IENIMIYLNINEIERLAEIVAELVKLGMSVNAELKYDRWQIEVYK
Ga0209296_12614172	3300027759	Freshwater Lake	MIYLYLNETQRLAEIVAELTKLNMGVVAELHGNKWHIEVTQ
Ga0209829_100808255	3300027777	Freshwater Lake	MIYLNSNDFERLAAIVAELVKLNMSVVAELRGTKWVIEVTN
Ga0209972_102587242	3300027793	Freshwater Lake	MIYINLNEIERLCEIVAYLTKMKMGVVAELKGTKWHIEVTN
Ga0304728_10204134	3300028393	Freshwater Lake	VGKDDIEDIMIYLNINEIERLAEIVAELVKLGMSVTAELKYDRWQIEVYK
Ga0238435_10004172	3300029349	Freshwater	MIYLYLNETEKLAEIVSELVKLGMGVVAELHGNKWHIEVTK
Ga0119944_10066243	3300029930	Aquatic	MIYLNLNEIERLCEIVAYLTKMKMGVVAELKGTKWHIEVTN
Ga0315907_110055312	3300031758	Freshwater	MIYLYLNETEKLAEIVSELVKLGMGVVAELHGNKWHIEVSK
Ga0315904_10000070106	3300031951	Freshwater	MIYLYLNETQKLAEIVAELVKLNMGVVAELHGNRWHIEVTK
Ga0315904_101838223	3300031951	Freshwater	MIYLYLNETQKLAEIVAELVKLNMGVVAELHGNKWHIEVTK
Ga0315901_111445421	3300031963	Freshwater	RVQMIYLYLNETQRLAEIVSELVKLNMGVVAELHGDRWHIEVTK
Ga0315903_108842233	3300032116	Freshwater	VIYLYLNETEKLAAIVAELVKLKMGVVAELHGNKWHIEVTQ
Ga0334980_0002109_1887_2012	3300033816	Freshwater	MIYLNINEIERLAEIVSELVKLGMSVTAELKYGRWQIEVYK
Ga0334981_0044506_1444_1569	3300033980	Freshwater	MIYLNINEIERLAEIVAELVKLDMCVIAELKGTRWSIEVTK
Ga0334982_0506320_414_533	3300033981	Freshwater	MIYLNINEIERLAEIVSELVKLGMSVTAELKYDRWQIEVY
Ga0334986_0254175_833_952	3300034012	Freshwater	MIYLYLNETQRLAEIVAELVKLNMGVVAELHGDRWHIEVT
Ga0334985_0718520_33_158	3300034018	Freshwater	MIYLYLNETEKLAAIVAELVKLNMGVVAELHGNKWHVEVTT
Ga0334995_0196502_573_698	3300034062	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELRGNKWCIEVTK
Ga0334995_0280872_536_661	3300034062	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGDKWWIEVTK
Ga0335028_0661579_432_551	3300034071	Freshwater	YLYLNETQRLAEIVAELVKLNMDVVAELHGNKWHIEVSK
Ga0310127_031089_1791_1916	3300034072	Fracking Water	MIYLYLNETQRLAEIVAALVKLNMGVVAELHGNRWHIEVTQ
Ga0310127_302159_2_118	3300034072	Fracking Water	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGDKWWIEV
Ga0310130_0012947_656_781	3300034073	Fracking Water	MIYLYLNETQRLAEIVSELIKLNMGVVAELHGNRWHIEVTQ
Ga0335020_0016181_792_917	3300034082	Freshwater	MIYLNLNEIERLAEIVSELVKLGMSVTAELKYDRWQIEVYK
Ga0335027_0170762_1274_1399	3300034101	Freshwater	MIYLYLNETEKLATIVSELVKLKMGVVAELHGNKWHIEVTQ
Ga0335027_0887390_244_369	3300034101	Freshwater	MIYLYLNETQRLAEIVSELVKLNMGVVAELHGNKWHIEVSK
Ga0335031_0514189_45_176	3300034104	Freshwater	MIMIYVYMNEIERLTEIVAELTKLGMSVVAERHGDKWHIEVSK
Ga0335060_0648898_305_454	3300034122	Freshwater	VFGGCEGKMIYLNINEIERLAEIVSELVKLGMSVTAELKYDRWQIEVYK
Ga0335065_0412647_1_117	3300034200	Freshwater	MIYLYLNETEKLAAIVAELVKLNMGVVAELHGNKWHIEV
Ga0334997_0388250_147_299	3300034280	Freshwater	LPYSFCGGKMIYLYLNETQRLAEIVSELVKLNMGVVAELHGDKWHIEVTK
Ga0335013_0002672_6160_6285	3300034284	Freshwater	VIYLYLNETQKLAEIVAELVKLNMGVVAELHGNKWHIEVTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054798

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences