NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F054761

Metagenome Family F054761

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F054761
Family Type Metagenome
Number of Sequences 139
Average Sequence Length 37 residues
Representative Sequence MSGVMADLDDRNRLLRRILLGIVAVLVIASFLVGIRW
Number of Associated Samples 114
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.16 %
% of genes near scaffold ends (potentially truncated) 13.67 %
% of genes from short scaffolds (< 2000 bps) 82.01 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.122 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(17.266 % of family members)
Environment Ontology (ENVO) Unclassified
(25.180 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(37.410 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 53.85%    β-sheet: 0.00%    Coil/Unstructured: 46.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 139 Family Scaffolds
PF01040UbiA 48.20
PF00510COX3 33.81
PF02628COX15-CtaA 1.44
PF04011LemA 0.72
PF13186SPASM 0.72
PF13620CarboxypepD_reg 0.72
PF00701DHDPS 0.72
PF00115COX1 0.72
PF03626COX4_pro 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 139 Family Scaffolds
COG1845Heme/copper-type cytochrome/quinol oxidase, subunit 3Energy production and conversion [C] 33.81
COG03294-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyaseCell wall/membrane/envelope biogenesis [M] 1.44
COG1612Heme A synthaseCoenzyme transport and metabolism [H] 1.44
COG1704Magnetosome formation protein MamQ, lipoprotein antigen LemA familyCell wall/membrane/envelope biogenesis [M] 0.72
COG3125Heme/copper-type cytochrome/quinol oxidase, subunit 4Energy production and conversion [C] 0.72

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.12 %
UnclassifiedrootN/A2.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000363|ICChiseqgaiiFebDRAFT_11113547All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300005167|Ga0066672_10252782All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1135Open in IMG/M
3300005171|Ga0066677_10426973All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300005174|Ga0066680_10118395All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1636Open in IMG/M
3300005343|Ga0070687_100870197All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300005406|Ga0070703_10422280All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300005526|Ga0073909_10244190All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005543|Ga0070672_101708794All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium565Open in IMG/M
3300005552|Ga0066701_10073222All Organisms → cellular organisms → Bacteria → Proteobacteria1947Open in IMG/M
3300005561|Ga0066699_10854221All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005569|Ga0066705_10361984All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300005617|Ga0068859_103053252All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005764|Ga0066903_100781081All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300005843|Ga0068860_102219708All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300006046|Ga0066652_100619709All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300006049|Ga0075417_10007357All Organisms → cellular organisms → Bacteria → Proteobacteria3887Open in IMG/M
3300006755|Ga0079222_10574040All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300006806|Ga0079220_10586219All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300006844|Ga0075428_100000123All Organisms → cellular organisms → Bacteria66826Open in IMG/M
3300006844|Ga0075428_100002086All Organisms → cellular organisms → Bacteria21561Open in IMG/M
3300006844|Ga0075428_101017355All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium877Open in IMG/M
3300006844|Ga0075428_101087757All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300006844|Ga0075428_101951168All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300006845|Ga0075421_100157490All Organisms → cellular organisms → Bacteria2836Open in IMG/M
3300006845|Ga0075421_100361046All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300006852|Ga0075433_10397734All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300006854|Ga0075425_100129462All Organisms → cellular organisms → Bacteria2884Open in IMG/M
3300006854|Ga0075425_101150354All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300006854|Ga0075425_101671725All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300006871|Ga0075434_101579591All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300006880|Ga0075429_100938886All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300006903|Ga0075426_11217393All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300006904|Ga0075424_100903965All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300006969|Ga0075419_11486677All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300007004|Ga0079218_10008328All Organisms → cellular organisms → Bacteria4909Open in IMG/M
3300007004|Ga0079218_12670178All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300007255|Ga0099791_10542281All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300009090|Ga0099827_10695178All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium879Open in IMG/M
3300009100|Ga0075418_11591502All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300009157|Ga0105092_10017101All Organisms → cellular organisms → Bacteria3816Open in IMG/M
3300010359|Ga0126376_11501891All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300010360|Ga0126372_12501218All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300010362|Ga0126377_11471462All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300010371|Ga0134125_10200127All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2223Open in IMG/M
3300010373|Ga0134128_10756114All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300010399|Ga0134127_11389577All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300010400|Ga0134122_10044965All Organisms → cellular organisms → Bacteria3378Open in IMG/M
3300010401|Ga0134121_10674230All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300010401|Ga0134121_13063486All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300012355|Ga0137369_10113646All Organisms → cellular organisms → Bacteria2201Open in IMG/M
3300012582|Ga0137358_10692332All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300012685|Ga0137397_10012897All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia5843Open in IMG/M
3300012685|Ga0137397_10416691All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300012685|Ga0137397_11137134All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300012922|Ga0137394_10063528All Organisms → cellular organisms → Bacteria3067Open in IMG/M
3300012922|Ga0137394_10914726All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300012948|Ga0126375_11269294All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300012948|Ga0126375_11340685Not Available603Open in IMG/M
3300013297|Ga0157378_10130792All Organisms → cellular organisms → Bacteria2323Open in IMG/M
3300015241|Ga0137418_10171890All Organisms → cellular organisms → Bacteria1893Open in IMG/M
3300015264|Ga0137403_11172242All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300015371|Ga0132258_11882275All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1506Open in IMG/M
3300015371|Ga0132258_12681349All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1243Open in IMG/M
3300015372|Ga0132256_102688052All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300015374|Ga0132255_104176663All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300018028|Ga0184608_10013703All Organisms → cellular organisms → Bacteria2818Open in IMG/M
3300018031|Ga0184634_10184087All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium947Open in IMG/M
3300018052|Ga0184638_1087916All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1140Open in IMG/M
3300018059|Ga0184615_10146045All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1335Open in IMG/M
3300018059|Ga0184615_10446401All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300018061|Ga0184619_10137232All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300018076|Ga0184609_10065616All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300018077|Ga0184633_10395744All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300018482|Ga0066669_10554642All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300019360|Ga0187894_10442600All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium571Open in IMG/M
3300019789|Ga0137408_1224843All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1033Open in IMG/M
3300020004|Ga0193755_1088894All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300021081|Ga0210379_10466191All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300023072|Ga0247799_1064427All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300025318|Ga0209519_10361857All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300025324|Ga0209640_10640282All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300025327|Ga0209751_10679406All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium818Open in IMG/M
3300025893|Ga0207682_10249768All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium826Open in IMG/M
3300025899|Ga0207642_10625892All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300025907|Ga0207645_10670377All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300025930|Ga0207701_11137113All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300025938|Ga0207704_10133060All Organisms → cellular organisms → Bacteria1726Open in IMG/M
3300025942|Ga0207689_10398134All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300026297|Ga0209237_1045043All Organisms → cellular organisms → Bacteria2267Open in IMG/M
3300026309|Ga0209055_1088087All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300026315|Ga0209686_1141324All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300026535|Ga0256867_10019283All Organisms → cellular organisms → Bacteria2926Open in IMG/M
3300026547|Ga0209156_10218377All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium902Open in IMG/M
3300027787|Ga0209074_10273124All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300027873|Ga0209814_10247106All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300027880|Ga0209481_10456478All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300027886|Ga0209486_10141589All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300027907|Ga0207428_10400905All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300027909|Ga0209382_10000149All Organisms → cellular organisms → Bacteria106182Open in IMG/M
3300027909|Ga0209382_10114624All Organisms → cellular organisms → Bacteria3147Open in IMG/M
3300027909|Ga0209382_10252873All Organisms → cellular organisms → Bacteria2000Open in IMG/M
3300028592|Ga0247822_10718360All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300028792|Ga0307504_10206630All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300028878|Ga0307278_10050231All Organisms → cellular organisms → Bacteria1890Open in IMG/M
3300030006|Ga0299907_10197844All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1659Open in IMG/M
3300030006|Ga0299907_10389142All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1122Open in IMG/M
3300030619|Ga0268386_10028520All Organisms → cellular organisms → Bacteria4411Open in IMG/M
3300031228|Ga0299914_10031407All Organisms → cellular organisms → Bacteria4429Open in IMG/M
3300031538|Ga0310888_10679819All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300031548|Ga0307408_100119009All Organisms → cellular organisms → Bacteria2043Open in IMG/M
3300031716|Ga0310813_10036401All Organisms → cellular organisms → Bacteria3525Open in IMG/M
3300031716|Ga0310813_10343524All Organisms → cellular organisms → Bacteria1270Open in IMG/M
3300031720|Ga0307469_10066863All Organisms → cellular organisms → Bacteria2358Open in IMG/M
3300031720|Ga0307469_10995500All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium782Open in IMG/M
3300031720|Ga0307469_11344326Not Available680Open in IMG/M
3300031740|Ga0307468_101120177All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300031740|Ga0307468_101304639All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300031740|Ga0307468_101970879Not Available558Open in IMG/M
3300031820|Ga0307473_10225907All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1130Open in IMG/M
3300031820|Ga0307473_10668339All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium726Open in IMG/M
3300031852|Ga0307410_10456724All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1043Open in IMG/M
3300031913|Ga0310891_10091503All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300031949|Ga0214473_11514746All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300032000|Ga0310903_10097190All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1246Open in IMG/M
3300032017|Ga0310899_10472077All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300032174|Ga0307470_10695790All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300032180|Ga0307471_102839708All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300032211|Ga0310896_10783676All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300032770|Ga0335085_10322015All Organisms → cellular organisms → Bacteria1823Open in IMG/M
3300032770|Ga0335085_10363532All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300032782|Ga0335082_11213082All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300032828|Ga0335080_10076775All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → environmental samples → uncultured Poribacteria bacterium3705Open in IMG/M
3300033416|Ga0316622_103142372All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium524Open in IMG/M
3300033417|Ga0214471_10286857All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1341Open in IMG/M
3300033433|Ga0326726_10526826All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria1132Open in IMG/M
3300033551|Ga0247830_11009750All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300034165|Ga0364942_0201494All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium650Open in IMG/M
3300034692|Ga0373917_0011502All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1082Open in IMG/M
3300034894|Ga0373916_0069016Not Available540Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere17.27%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.63%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.47%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.04%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.32%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.16%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.16%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.16%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.16%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.44%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.44%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.44%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry1.44%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.72%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.72%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.72%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.72%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.72%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034692Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3EngineeredOpen in IMG/M
3300034894Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.2EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1111354723300000363SoilMNGAMDGLDDRNRFVRRILLGIVAVLLIASFLVGIRW*
Ga0066672_1025278213300005167SoilMSAVMTDPGDLGQRNRLVRRILLGIVAVLIVASFMVGIRW*
Ga0066677_1042697323300005171SoilMSEVMIDPGDLGQRNRLVRRVLLGIVAVLIVASFMVGIRW*
Ga0066680_1011839543300005174SoilMSMSAVMTDPGDLGQRNRLVRRILLGIVAVLIVASFMVGIRW*
Ga0070687_10087019723300005343Switchgrass RhizosphereAGVRQGMSRVMTGLDDRNRLVRRILLGAVAILVIASFLVGIRW*
Ga0070703_1042228023300005406Corn, Switchgrass And Miscanthus RhizospherePGLRQGMNVMASEHDARNRRIVRVLLAIVAVLIVASFMVGIRW*
Ga0073909_1024419023300005526Surface SoilMSLVMSDLQERNRWVRRIILTAVAVLVVASFLVGIRW*
Ga0070672_10170879423300005543Miscanthus RhizosphereMSVLMASEHDARNRRIVRVLLAIVAVLIVASFMVGIRW*
Ga0066701_1007322223300005552SoilMSTLMSELDDRNRLVRRVLLAIAAVLIVASFLVGIRW*
Ga0066699_1085422113300005561SoilMTDPGDLGQRNRLVRRILLGIVAVLIVASFMVGIRW*
Ga0066705_1036198423300005569SoilMSTLMSELGDRNRLVRRVLLAIMAVLIVASFLVGIRW*
Ga0068859_10305325223300005617Switchgrass RhizosphereMSVLMASEHDARNRRLVRVLLAIVAVLIVASFMVGIRW*
Ga0066903_10078108123300005764Tropical Forest SoilMSIMSSELQDRNRLVRRIILTAVALLVVASFLVGIRW*
Ga0068860_10221970823300005843Switchgrass RhizosphereMSRVMTGLDDRNRLVRRILLGAVAILVIASFLVGIRW*
Ga0066652_10061970923300006046SoilMSVLMASEDDARNRRIVRVLLAIVAVLIVASFMVGIRW*
Ga0075417_1000735723300006049Populus RhizosphereMSLAMDSLGERNRLVRRILLTIVAALVIGSFLVGIRW*
Ga0079222_1057404023300006755Agricultural SoilMSTLRSELHDRNRLVRRVLLAIMAVLAIASFLVGIRW*
Ga0079220_1058621923300006806Agricultural SoilMSPMMSELDDRNRWVRRLLLGVVATLVVASFLVGIRW*
Ga0075428_100000123333300006844Populus RhizosphereMSLAMDSLEERNRTLRRVLLAIVALLVVASFLVGIRW*
Ga0075428_100002086223300006844Populus RhizosphereMSIVASDLEERNRRVRRIILTAVALLVVASFLVGIRW*
Ga0075428_10101735513300006844Populus RhizosphereMSDVMATLDERNRWVRRILLGVVAVLVVASFLVGIRW*
Ga0075428_10108775723300006844Populus RhizosphereMSIVMGGLEDRNRLVRRILLGIVALLVVASFLVGIRW*
Ga0075428_10195116823300006844Populus RhizosphereMNGVVDGLDDRNRFVRRILLGIVAVLLIASFLVGIRW*
Ga0075421_10015749043300006845Populus RhizosphereMSSVLMGLDDRNRRVRRILLGIVAVLVVVSFLVGIRW*
Ga0075421_10036104623300006845Populus RhizosphereMSVAMDSLGERNRLVRRILLTIVAALVIGSFLVGIRW*
Ga0075433_1039773423300006852Populus RhizosphereMSTLMTDLAERNRLLRRVLLTIVAVLVVASFLVGIRW*
Ga0075425_10012946263300006854Populus RhizosphereMSTLMTDLTERNRLLRRVLLTIVAVLVVASFLVGIRW*
Ga0075425_10115035423300006854Populus RhizosphereMSVSMSELGDRNRLVRRVLLTIVAVLVVASFLVGIRW*
Ga0075425_10167172523300006854Populus RhizosphereMSTLMSELGDRNRLVRRMLLAIVAVLVVASFLVGIRW*
Ga0075434_10157959123300006871Populus RhizosphereMSTVMMSELGDRNRRLRRVLLLIAAALVVASFLVGIRW*
Ga0075429_10093888623300006880Populus RhizosphereMSTLTTDLPERNRLLRRVLLTIVAVLVVASFLVGIRW*
Ga0075426_1121739323300006903Populus RhizosphereMSTMLSDLAERNRLVRRILLGIVAVLLVASFLVGIRW*
Ga0075424_10090396533300006904Populus RhizosphereGVRQGMSVAMDSLGERNRLVRRILLTIVAALVIGSFLVGIRW*
Ga0075419_1148667723300006969Populus RhizosphereMSMLMTDLTERNRLLRRVLLTIVAVLVVASFLVGIRW*
Ga0079218_1000832833300007004Agricultural SoilMSVVMAGLDERNRRLRRLLLGIVAALVIASFLVGIRW*
Ga0079218_1267017823300007004Agricultural SoilMNGVMDGLEDRNRFVRRILLGIVAVLLIASFLVGIRW*
Ga0099791_1054228113300007255Vadose Zone SoilMSEVMTALGERNRLVRRVLLGIVATLLVASFLVGIRW*
Ga0099827_1069517823300009090Vadose Zone SoilMSTLMSELDDRNRLVRRVLLAIAAVLVVASFLVGIRW*
Ga0075418_1159150213300009100Populus RhizosphereMSTLTTDLAERNRLLRRVLLTIVAVLVVASFLVGIRW*
Ga0105092_1001710163300009157Freshwater SedimentMSGIMVGLDDRNRRLRRILLGIVAVLVVVSFLVGIRW*
Ga0126376_1150189123300010359Tropical Forest SoilMSVSMTSELHDRNRRVRWILLGIMAVLVVASFLVGIRW*
Ga0126372_1250121823300010360Tropical Forest SoilMSIMSSELEDRNRLVRRIILTAVAVLVVASFLVGIRW*
Ga0126377_1147146223300010362Tropical Forest SoilMSIMSSELQERNRLVRRIILTTVAVLVVASFLVGIRW*
Ga0134125_1020012753300010371Terrestrial SoilMSQVMADLEERNRLVRRILLGAVAVLVVASFLVGIRW*
Ga0134128_1075611423300010373Terrestrial SoilMSVMVSKLDDRNRWVRRLLLGIVATLVVASFLVGIRW*
Ga0134127_1138957723300010399Terrestrial SoilSIVSSELQERNRWVRRIILTGVAVLVVASFLVGVRW*
Ga0134122_1004496543300010400Terrestrial SoilMSIVSSELQERNRWVRRIILTGVAVLVVASFLVGVRW*
Ga0134121_1067423023300010401Terrestrial SoilMSVMVSELDDRNRWVRRLLLGIVAVLVVASFLVGIRW*
Ga0134121_1306348623300010401Terrestrial SoilPGLRQGMSVLMASEQDDRNRLVRRVLLAIVAVLIIASFLVGIRW*
Ga0137369_1011364643300012355Vadose Zone SoilMSGVMADLDDRNRLLRRILLGIVAALVIASFLVGIRW*
Ga0137358_1069233223300012582Vadose Zone SoilMSTLMRTSLDERNRWIRRLLLGIVATLVVASFFVGIRW*
Ga0137397_1001289773300012685Vadose Zone SoilMSVLMASEHDDRNRIVRRVLLAIVAVLVIASFLVGIRW*
Ga0137397_1041669123300012685Vadose Zone SoilMSIVMSDIQERNRWVRRIILTAVAVLVVASFLVGIRW*
Ga0137397_1113713413300012685Vadose Zone SoilMSSVMADLDDRNRLLRRVLLGIVAVLVIASFLVGIRW*
Ga0137394_1006352853300012922Vadose Zone SoilMNALMSDLDERNRLLRRLLLTVVAVLLVASFLVGIRW*
Ga0137394_1091472623300012922Vadose Zone SoilMSLMMSDLQERNRWVRRIILTAVAVLVVASFLVGIRW*
Ga0126375_1126929423300012948Tropical Forest SoilMMSELADRNRRVRKILLVIMAVLIVASFLVGIRW*
Ga0126375_1134068523300012948Tropical Forest SoilMSAAVDSLRERNRLVRRILLTIVAALVIASFLVGIRW*
Ga0157378_1013079263300013297Miscanthus RhizosphereMNVMASEHDARNRRIVRVLLAIMAVLIVASFMVGIRW*
Ga0137418_1017189033300015241Vadose Zone SoilMSVLMASEHDDRNRLVRRVLLAIVAVLVIASFLVGIRW*
Ga0137403_1117224223300015264Vadose Zone SoilGLRQGMSTVMPELGDRNRVVRRVLLAVVAVLVIASFLVGIRW*
Ga0132258_1188227513300015371Arabidopsis RhizosphereMSIMTSDLQDRNRLVRRIILTAVAVLIVASFLVGIRW*
Ga0132258_1268134933300015371Arabidopsis RhizosphereMSRVMADLEERNRLVRRILLGAVAVLVVASFLVGIRW*
Ga0132256_10268805213300015372Arabidopsis RhizosphereMSIMTSGLQDRNRLVRRIILTAVAVLIVASFLVGIRW*
Ga0132255_10417666313300015374Arabidopsis RhizosphereMSIMSSDLQERNRLVRRIILAGVAVLVVASFLVGI
Ga0184608_1001370343300018028Groundwater SedimentMSGVMVDLDDRNRLLRRILLGIVAVLVIASFLVGIRW
Ga0184634_1018408713300018031Groundwater SedimentMSGAMADLDDRNRLLRRILLGIVATLVIASFLVGIRW
Ga0184638_108791623300018052Groundwater SedimentMSGVMADLDDHNRLLRRILLGIVAVLVIASFLVGIRW
Ga0184615_1014604513300018059Groundwater SedimentMSGVMADLDDRNRLLRRILLGIVAVLVIASFLVGIRW
Ga0184615_1044640123300018059Groundwater SedimentMSGVMAHLDDRNRLLRRILLGIVAALVIASFLVGIRW
Ga0184619_1013723223300018061Groundwater SedimentMSGVMVDLEDRNRLLRRILLGIVATLVIASLLVGIRW
Ga0184609_1006561623300018076Groundwater SedimentMSDVMVDLDDRNRLLRRILLGIVAVLVIASFLVGIRW
Ga0184633_1039574423300018077Groundwater SedimentMSGVMADLDDRNRLLRRILLGIVATLVIASFLVGIRW
Ga0066669_1055464223300018482Grasslands SoilMSVLMAFEHDDRNRLVRRVLLAIVAVLVIASFLVGIRW
Ga0187894_1044260013300019360Microbial Mat On RocksMSLVMADLDDRNRLVRRILLGIVAALVVAAFLVGIRW
Ga0137408_122484323300019789Vadose Zone SoilMSTLMRTSLDERNRWIRRLLLGIVATLVVASFFVGIRW
Ga0193755_108889423300020004SoilMSLVMSDLQERNRWVRRIILTAVAVLVVASFLVGIRW
Ga0210379_1046619123300021081Groundwater SedimentMSGAMADLDDRNRLLRRILFGIVAALVIASFLVGIRW
Ga0247799_106442723300023072SoilMSRVMTGLDDRNRLVRRILLGAVAILVIASFLVGIRW
Ga0209519_1036185723300025318SoilMSGMMVDLDDRNRRVRRILLGIVAVLVVASLLVGIRW
Ga0209640_1064028223300025324SoilMSRAMADLDDRNRLVRRILLGLVAVLVVASFLVGIRW
Ga0209751_1067940613300025327SoilMSGVMTDLEDRNRLVRRVLLGIVAALVVASFLVGIRW
Ga0207682_1024976813300025893Miscanthus RhizosphereMSIVSSELQERNRWVRRIILTGVAVLVVASFLVGVRW
Ga0207642_1062589223300025899Miscanthus RhizosphereMNVMASEHDARNRRIVRVLLAIVAVLIVASFMVGIRW
Ga0207645_1067037713300025907Miscanthus RhizosphereMSVLMASEHDARNRRLVRVLLAIVAVLIVASFMVG
Ga0207701_1113711323300025930Corn, Switchgrass And Miscanthus RhizosphereMSLVMSDLQERNRWVRRIILTAVAVLVVASFLVGIR
Ga0207704_1013306033300025938Miscanthus RhizosphereMSLVMSDLQERNRWVRRIILTGVAVLVVASFLVGVRW
Ga0207689_1039813423300025942Miscanthus RhizosphereMSQVMADLEERNRLVRRILLGAVAVLVVASFLVGIRW
Ga0209237_104504343300026297Grasslands SoilMSTLMSELDDRNRLVRRVLLAIAAVLIVASFLVGIRW
Ga0209055_108808723300026309SoilMSMSAVMTDPGDLGQRNRLVRRILLGIVAVLIVASFMVGIRW
Ga0209686_114132423300026315SoilMSEVMIDPGDLGQRNRLVRRVLLGIVAVLIVASFMVGIRW
Ga0256867_1001928373300026535SoilMSGIMVGLDDRNRCLRRILLGIVAVLVVVSFLVGIRW
Ga0209156_1021837723300026547SoilMSTLMTDLAERNRLLRRVLLTIVAVLVVASLLVGI
Ga0209074_1027312423300027787Agricultural SoilMSTLRSELHDRNRLVRRVLLAIMAVLAIASFLVGIRW
Ga0209814_1024710623300027873Populus RhizosphereMSVAMDSLGERNRLVRRILLTIVAALVIGSFLVGIRW
Ga0209481_1045647823300027880Populus RhizosphereMSLAMDSLEERNRTLRRVLLAIVALLVVASFLVGIRW
Ga0209486_1014158933300027886Agricultural SoilMSVVMAGLDERNRRLRRLLLGIVAALVIASFLVGIRW
Ga0207428_1040090523300027907Populus RhizosphereMSVLMASEHDARNRRIVRVLLAIVAVLIVASFMVGIRW
Ga0209382_100001491013300027909Populus RhizosphereMSDVMATLDERNRWVRRILLGVVAVLVVASFLVGIRW
Ga0209382_1011462443300027909Populus RhizosphereMNGVVDGLDDRNRFVRRILLGIVAVLLIASFLVGIRW
Ga0209382_1025287343300027909Populus RhizosphereMSSVLMGLDDRNRRVRRILLGIVAVLVVVSFLVGIRW
Ga0247822_1071836023300028592SoilMNGVMDGLEDRNRFVRRILLGIVAVLLIASFLVGIRW
Ga0307504_1020663023300028792SoilMSGVMADLEDRNRLLRRILLGIMAVLVIASFLVGIRW
Ga0307278_1005023113300028878SoilMSGVMADLDDRNRLLRRILLGIVAALVIASFLVGIRW
Ga0299907_1019784423300030006SoilMNGMMVDLDDRNRRVRRVLLGIVAVLVVASFLVGIRW
Ga0299907_1038914223300030006SoilMSGIMVGLDDRNRRVRRILLGIVAVLVVVSFLVGIRW
Ga0268386_1002852023300030619SoilMSGIMVGLDDRNRRLRRILLGIVAVLVVVSFLVGIRW
Ga0299914_1003140783300031228SoilMSSAMVGLDDRNRRVRRILLGIVAVLVVASLLVGIRW
Ga0310888_1067981913300031538SoilVRQGMSIVASDLEERNRRVRRIILTAVALLVVASFLVGIRW
Ga0307408_10011900943300031548RhizosphereMNGLMVGLDDRNRRVRRILLGIVAALVVVSFLVGIRW
Ga0310813_1003640133300031716SoilMSVMVSKLDDRNRWVRRLLLGIVATLVVASFLVGIRW
Ga0310813_1034352423300031716SoilMSVLMAAEHDARNRRIVRVLLAIVAVLIVASFMVGIRW
Ga0307469_1006686323300031720Hardwood Forest SoilMSTVMMSELGDRNRRLRRVLLLIAAALVVASFLVGIRW
Ga0307469_1099550023300031720Hardwood Forest SoilMSTLMADLDERNRLLRRVLLTIVAMLVVASLLVGIRW
Ga0307469_1134432623300031720Hardwood Forest SoilMSVPMMSDLADRNRRVRWVLLGLVAVLVAASFLVGIRW
Ga0307468_10112017723300031740Hardwood Forest SoilMSTVMAGLDDRNRMVRRVLLAVVAVLIVASFMVGIRW
Ga0307468_10130463923300031740Hardwood Forest SoilMSIVMSELQDRNRWVRRIILTVVAALIVASFLVGIRW
Ga0307468_10197087923300031740Hardwood Forest SoilMSTVMTGLGDRNRLVRRVLLAIVALLVIVSFMVGIRW
Ga0307473_1022590723300031820Hardwood Forest SoilMSIMPSELQDRNRLVRRIILTAVAVLVVASFLVGVRW
Ga0307473_1066833923300031820Hardwood Forest SoilMSVMMSDLQERNRWVRRIILTAVAVLVVASFLVGIRW
Ga0307410_1045672433300031852RhizosphereSVVMAGLDERNRRLRRLLLGIVAALVIASFLVGIRW
Ga0310891_1009150333300031913SoilRVMTGLDDRNRLVRRILLGAVAILVIASFLVGIRW
Ga0214473_1151474613300031949SoilMSRAMADLDDRNRLVRRILLGLVAVLMVASLLVGIR
Ga0310903_1009719043300032000SoilMSLVMADLEERNRLVRRILLGAVAVLVVASFLVGIRW
Ga0310899_1047207723300032017SoilMSIVSSDLQERNRWVRRIILTGVAVLVVASFLVGVRW
Ga0307470_1069579023300032174Hardwood Forest SoilMSVVMSDLQERNRWVRRIILTAVAVLVVASFLVGIRW
Ga0307471_10283970823300032180Hardwood Forest SoilMSTLMSELDDRNRLVRRVLLAIAAVLVVASFLVGIRW
Ga0310896_1078367623300032211SoilVRQGMSRVMTGLDDRNRLVRRILLGAVAILVIASFLVGIRW
Ga0335085_1032201543300032770SoilMSIMRSELHDRNRLVLRIIVTAVAVLVVASFLVGIRW
Ga0335085_1036353223300032770SoilMSTVMTSALGDRNRRLRRLLLVIMAVLVVGSFLVGIRW
Ga0335082_1121308223300032782SoilMSIMASALHDRNRLVRRIILTVVAVLVVASFLVGIRW
Ga0335080_1007677543300032828SoilMSIMASGLADRNRLVRRIILTAVAVLVVASFLVGIRW
Ga0316622_10314237213300033416SoilGVRQGMSGVMAGLDDRNRRVRWILLGIVAALVVASFLVGIRW
Ga0214471_1028685723300033417SoilMSLATADLDDRNRLVRRILLGIVAVLVIVSLLVGIRW
Ga0326726_1052682623300033433Peat SoilMSSLMTSLEERNRWIRRLLLGIVATLVVASFLVGIRW
Ga0247830_1100975023300033551SoilMNGVMDGLDDRNRFVRRILLGIVAVLLIASFLVGIRW
Ga0364942_0201494_518_6313300034165SedimentMSRVMADLDDRNRLVRRILLGLVAVLVIASFLVGIRW
Ga0373917_0011502_850_9633300034692Sediment SlurryMSDVMVGLDDRNRRVRWILLGIVAVLVVASFLVGIRW
Ga0373916_0069016_189_3023300034894Sediment SlurryMSIVASDLDERNRRVRRIILTAVALLVVASFLVGIRW

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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