NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F054653

Metagenome Family F054653

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054653
Family Type Metagenome
Number of Sequences 139
Average Sequence Length 82 residues
Representative Sequence MTVPHPTPSPTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA
Number of Associated Samples 82
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 68.35 %
% of genes near scaffold ends (potentially truncated) 30.22 %
% of genes from short scaffolds (< 2000 bps) 84.89 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.554 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(24.460 % of family members)
Environment Ontology (ENVO) Unclassified
(27.338 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.288 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.
1JGI10216J12902_1013357522
2JGI25407J50210_100038692
3Ga0058689_101161512
4Ga0081538_100314462
5Ga0081538_100405802
6Ga0081538_100815652
7Ga0081538_100905712
8Ga0075428_1018437151
9Ga0075433_106237922
10Ga0075420_1005284131
11Ga0075418_109568692
12Ga0075418_110932981
13Ga0114129_113448532
14Ga0114129_124447701
15Ga0114129_133879972
16Ga0111538_141244111
17Ga0126307_100158704
18Ga0126307_100427065
19Ga0126307_106115052
20Ga0126307_106780512
21Ga0126307_111465603
22Ga0126313_100386125
23Ga0126313_100495925
24Ga0126313_101174131
25Ga0126313_101714054
26Ga0126313_104136652
27Ga0126313_104244222
28Ga0126313_113505322
29Ga0126315_103407483
30Ga0126308_100231527
31Ga0126312_100334126
32Ga0126312_101459872
33Ga0126312_105095373
34Ga0126312_110445892
35Ga0126314_102535354
36Ga0126310_112498662
37Ga0126311_101309253
38Ga0126311_109991471
39Ga0126306_100207085
40Ga0126306_103030792
41Ga0126306_103231363
42Ga0126306_105514412
43Ga0126306_105575592
44Ga0126306_115626312
45Ga0137374_111992981
46Ga0137369_101011092
47Ga0137375_103457052
48Ga0137375_111079111
49Ga0137373_104196533
50Ga0162652_1001067912
51Ga0182000_101201562
52Ga0132257_1017353941
53Ga0184604_101496972
54Ga0184605_105338652
55Ga0184621_100447823
56Ga0184623_103737662
57Ga0184635_101773322
58Ga0184624_102663232
59Ga0184612_101658222
60Ga0184612_105421211
61Ga0184625_101904112
62Ga0184625_102392621
63Ga0184625_102988482
64Ga0190265_120980361
65Ga0190269_115160341
66Ga0190268_106850141
67Ga0190268_110462722
68Ga0190268_113892072
69Ga0190274_115338882
70Ga0190264_122136172
71Ga0193704_10524672
72Ga0210381_103346852
73Ga0224452_10189522
74Ga0224452_11429052
75Ga0222623_100028486
76Ga0222622_100183326
77Ga0222622_106050731
78Ga0207675_1020707152
79Ga0208847_1017481
80Ga0209875_10117282
81Ga0209874_10129374
82Ga0209853_11069882
83Ga0307291_11682232
84Ga0307322_101362172
85Ga0307285_100676893
86Ga0307285_100858852
87Ga0307313_101682482
88Ga0307311_101757312
89Ga0307317_100614093
90Ga0307318_100928301
91Ga0307316_101423112
92Ga0307320_101575661
93Ga0307320_104240931
94Ga0307323_102537922
95Ga0307290_100090249
96Ga0307290_100350485
97Ga0307290_100504652
98Ga0307287_100585972
99Ga0307302_100101504
100Ga0307310_105916752
101Ga0307314_101837621
102Ga0307289_101707072
103Ga0307278_1000053418
104Ga0307278_100329393
105Ga0307278_102188882
106Ga0307300_101921732
107Ga0307277_100967632
108Ga0307277_105066472
109Ga0247826_105682163
110Ga0247826_108664582
111Ga0268259_100248301
112Ga0268255_100775262
113Ga0307408_1016565362
114Ga0307405_100750266
115Ga0307405_102689724
116Ga0307405_102985571
117Ga0307405_104311552
118Ga0307405_105657022
119Ga0307405_113027752
120Ga0307413_109566072
121Ga0307413_121507102
122Ga0307410_101501264
123Ga0307410_104157362
124Ga0307410_114091431
125Ga0307410_121284112
126Ga0307406_102065962
127Ga0307406_121066302
128Ga0307407_103927751
129Ga0307407_106724432
130Ga0307407_107590521
131Ga0307412_101588443
132Ga0307409_1023804822
133Ga0307416_10000093925
134Ga0307416_1000214755
135Ga0307416_1004306432
136Ga0307416_1016062442
137Ga0307416_1033246342
138Ga0307414_116213291
139Ga0307415_1012057102
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 23.89%    β-sheet: 1.77%    Coil/Unstructured: 74.34%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MTVPHPTPSPTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
42.4%57.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Serpentine Soil
Soil
Soil
Soil
Groundwater Sand
Soil
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere
Agave
Agave
7.9%3.6%24.5%3.6%20.1%3.6%6.5%19.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10133575223300000956SoilVTASHPVPSPTSAGSVLDGDPQILIPLPEVAERLGISRWQAYKQARSGCLPTTRLGARDLHVPAAVWRRIEQEGLPPAPNGGGRA*
JGI25407J50210_1000386923300003373Tabebuia Heterophylla RhizosphereMTTSHPFPTPTAAGSVLAGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDSHGGEVA*
Ga0058689_1011615123300004016AgaveMTTPHPSPIPTAAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLAPAPEPEGGEVA*
Ga0081538_1003144623300005981Tabebuia Heterophylla RhizosphereMTTSHPAPSPTPATDGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDSHGGEVA*
Ga0081538_1004058023300005981Tabebuia Heterophylla RhizosphereMTTPHPSPTPTAAGSVLDGDPRVLIPLPEAAERLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPAPDGGEVA*
Ga0081538_1008156523300005981Tabebuia Heterophylla RhizosphereMTTSHPSPTPTPAGSVLDGDPRVLIPLPEAAKRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPVPEGGAVA*
Ga0081538_1009057123300005981Tabebuia Heterophylla RhizosphereMTTDSAPSPTPTAAESVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLSTTRLGARDLYVPAAVLRRIEQEGLPPTPEGGEVA*
Ga0075428_10184371513300006844Populus RhizosphereMTAPHPSPTAVGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPEPDGGGVA*
Ga0075433_1062379223300006852Populus RhizosphereMTTPHSAPSTTPAGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGSRDLYVPAAVLRRIEHEGLPPAAEGEVAE*
Ga0075420_10052841313300006853Populus RhizosphereMTTPYPAPSTIPTGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGSRDLYVPAAVLRRI
Ga0075418_1095686923300009100Populus RhizosphereMTAPSYHPSPTAAGSGSVLDGDPRILIPLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAALLRRIEQEGLPPAPEGGEVA*
Ga0075418_1109329813300009100Populus RhizosphereLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPESDGGAVA*
Ga0114129_1134485323300009147Populus RhizosphereMTTPHPSPTVAAVGSVLDGDPRVLIPLPEAAERLGISRWQAYKLARSGRLLTSRLGARDLYVPAAVLRRIEQEGLPPAPEGGEVA*
Ga0114129_1244477013300009147Populus RhizosphereMTTPYPAPSTIPTGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGSRDLYVPAAVLRRIEQEGLPPEPEGSVVA*
Ga0114129_1338799723300009147Populus RhizosphereLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPESDGGEVA*
Ga0111538_1412441113300009156Populus RhizosphereMTIPLHPSPTPAGSVLDGDPRILIPLPEVAERLGISRWQPYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPVPEGGEVA*
Ga0126307_1001587043300009789Serpentine SoilMTTPHPSPIPAGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGARDLYVPAAVLRRIEQEGLPPEPEGSVVA*
Ga0126307_1004270653300009789Serpentine SoilMTVPHSSPTPAAAGSVLDGDPRVLIPLPEAAERLGISRWQAYKLARCGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGGEVA*
Ga0126307_1061150523300009789Serpentine SoilLDGDPRVLIPLPEAAGRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPEPEGGVVA*
Ga0126307_1067805123300009789Serpentine SoilMTTTPHPSPTPIPAGSVLDGDPRVLIPLPEAAARLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPESDGGEVA*
Ga0126307_1114656033300009789Serpentine SoilLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGARDLYVPAAVLRRIEQEGLPPAPEGSVIA*
Ga0126313_1003861253300009840Serpentine SoilMTNAHPAPSPAEHVSGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLPTTCLGARDLHVPAAVLRRIEQEASPRSPREA*
Ga0126313_1004959253300009840Serpentine SoilMTSPHPALSPTPGAAGSVLDGDPRILIPLPEAAERLGISRWQAYKLARCGRLPTTRLGARDLYVPAAVLRRIEQEGLPTAPEGGEVA*
Ga0126313_1011741313300009840Serpentine SoilMTTPHPAPSTTPAGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGARDLYVPAAVLRRIEQEGLPPQPEGSVVA*
Ga0126313_1017140543300009840Serpentine SoilAHQVTTSHSSPTPAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDSHGGEVA*
Ga0126313_1041366523300009840Serpentine SoilVLDGDPRVLIPLPEAAQRLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDSYGGEVA*
Ga0126313_1042442223300009840Serpentine SoilMTASHTSPTQTAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGTRDLHVPTAVLRRIEQEGLPPEPEGGEGT*
Ga0126313_1135053223300009840Serpentine SoilMTTPHPSPTVPGSGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHKGLPPAPEPDGGELA*
Ga0126315_1034074833300010038Serpentine SoilSPARSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLATTRLGARDLHVPAAVLRRIEQEGLPPAPEGGEVG*
Ga0126308_1002315273300010040Serpentine SoilLDGDPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPASEGGEVA*
Ga0126312_1003341263300010041Serpentine SoilVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDSHGGEVA*
Ga0126312_1014598723300010041Serpentine SoilMTTPHPAPTVPGSGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGARDLHVPAAVLRRIEQEGLPPAAESEGSVVA*
Ga0126312_1050953733300010041Serpentine SoilLDGDPRVLVPLPEAAERLGISRWQAYKLARCGRLATTRLGARDLYVPAAVLRRIEQEGLPPAPDSHGGELA*
Ga0126312_1104458923300010041Serpentine SoilMTAPSSHPSPTAAGSGSVLDGDPRILIPLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAILRRIEEEGLPPTPEGGEVA*
Ga0126314_1025353543300010042Serpentine SoilVTASLPSSTPAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA*
Ga0126310_1124986623300010044Serpentine SoilMTAPSSHPSPTAAGSGSVLDGDPRVLIPLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPRAPEGGEVA*
Ga0126311_1013092533300010045Serpentine SoilMTVPHSSPTPAAAGSVLDGDPRVLIPLPEAAERLGISRWQAYKLARCGRLPTTRLGARDLHVPAAVLRRIEQQGLPPAPEGGEVA*
Ga0126311_1099914713300010045Serpentine SoilPSPTPAGSVLDGDPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPASEGGEVA*
Ga0126306_1002070853300010166Serpentine SoilMTTPDPSPTPTPVAAGSVLDGDPRILIPLPEAAARLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDSHGGEVA*
Ga0126306_1030307923300010166Serpentine SoilMTTTPHPSPTPGSAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEPEGGEVA*
Ga0126306_1032313633300010166Serpentine SoilVTASLPSSTAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEVA*
Ga0126306_1055144123300010166Serpentine SoilLDGDPRILIPLPEATQRMGISRWQAYKLARSGRLPTTRLGARDLYVPAAVLRRIEQEGLPPMEPEGGEVA*
Ga0126306_1055755923300010166Serpentine SoilPLRITTTTPHPSPTPTFSVFDGDPRILIPLPQATELLRISRWQAYKLARSGRLPTTRLGARDLYVPAAVLRRIEHEGLPPAAEGEGVA*
Ga0126306_1156263123300010166Serpentine SoilPLMTTPNLSPTPTGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRISTTRLGARDLYVPAAVLRRIEQEGLPPAPEGGEVA*
Ga0137374_1119929813300012204Vadose Zone SoilAAAAEDLSVLTGDKRVLIPLAEAAERMGISAWQAYKLAKAGRLPTTRPGKRHLYVPAAALRRIEREGLPPEGGEVA*
Ga0137369_1010110923300012355Vadose Zone SoilMAAPASVLDGDTRVLIPLPEAAARMGISLWQAYKLARSGRLPTTRPGRRDLYVPAAVLRRIEQQGLPPEGGEVA*
Ga0137375_1034570523300012360Vadose Zone SoilMHEQSARPAPSTASFSHPNLSPTVPASVLDGDPRILIPLPEAAQRLGISRWQTYKLARSGRLPTTRLGRRDLHVPAAVLRRIEQEGLPPEGGEVT*
Ga0137375_1110791113300012360Vadose Zone SoilMAAPASVLDGDTRVLIPLPEAATRMGISLWQAYKLARSGRLPTTRPGRRDLYVPAAVLRRIEQQGLPPEGGEVA*
Ga0137373_1041965333300012532Vadose Zone SoilAEALPVLTGDKRVLIPLAEAAERMGISPWQAYKLAKAGRLPTTRPNKRHLYVPAAALRRIEREGMPPEGGEVA*
Ga0162652_10010679123300012941SoilDGDPRILIPLPEAAERLGISRWQAYKLGRTGRLPTTRLGARDLHVPAAVLRRIEQEGLPPEPEGGEVA*
Ga0182000_1012015623300014487SoilVTTSHPSPTAAGSVLDGDPRILIPLPEAAARLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPMEPEGGEVA*
Ga0132257_10173539413300015373Arabidopsis RhizosphereMTTSHPSPVPTSAGSVLDGDPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGSRDLHVPAAVLRRI
Ga0184604_1014969723300018000Groundwater SedimentVTASLPSSTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGDAS
Ga0184605_1053386523300018027Groundwater SedimentAPHMTTPSPTPAGVGSVLDGDLRILIPLPEAAQRLGTSRWEAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEVT
Ga0184621_1004478233300018054Groundwater SedimentMTTPHPVPSPTPASAGAVLDGEPRLLIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGGEVA
Ga0184623_1037376623300018056Groundwater SedimentMTTSHPVPSPTPAAAWSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGL
Ga0184635_1017733223300018072Groundwater SedimentMTSHSVPSPTPTAASVAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEVA
Ga0184624_1026632323300018073Groundwater SedimentVTASRPSSTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEVA
Ga0184612_1016582223300018078Groundwater SedimentMTTPPPVPSPAAAGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLTTTRLGARDLHVPAAVLRRIEQEGLPPAQESDGGEVA
Ga0184612_1054212113300018078Groundwater SedimentMTIPHPSPAPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARTGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPELDG
Ga0184625_1019041123300018081Groundwater SedimentMTTAHPSPTPASAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRLIEQEGLPPAPEGGEVA
Ga0184625_1023926213300018081Groundwater SedimentSPATAAPASVLAGDTRILIPLPEAAERMGISLWQAYKLARSGRLPTTRLGARDLSVPAAVLRRIEQEGLPPEPEGSVVA
Ga0184625_1029884823300018081Groundwater SedimentMTTSHPSPPPTAGAVLGGDPRVLIPLPEAAERLGISRWQAYKLARSGRLPTTRMGARDLHVPAAVLRRIEQEGLPPAPEGGEVA
Ga0190265_1209803613300018422SoilMTTPHPSPTLPGSGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPISEGGEVA
Ga0190269_1151603413300018465SoilARAMTAQHPSPTPTTATTAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDGGEVA
Ga0190268_1068501413300018466SoilMTSHSAPSPTPAGSVLDGDPRVLIPLPEAAERLGISRWQAYKLARCGRLATTRLGARDLYVPAAVLRRIEQEGLPPAPEGGEVA
Ga0190268_1104627223300018466SoilTTSHPSPTPAGSVLDGDPRVLIPLPEAAERLGISRWQAYKLARLGRLPTTRLGARDLYVPAAVLRRIEHEGLPPAAGSEGSVVA
Ga0190268_1138920723300018466SoilGSVLDGDPRILIPLPEAAQRLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPESEGGAVA
Ga0190274_1153388823300018476SoilMTVPHPTPSPTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA
Ga0190264_1221361723300019377SoilMTAPFSHPSPTAAAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRI
Ga0193704_105246723300019867SoilVTASRPSSTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA
Ga0210381_1033468523300021078Groundwater SedimentGAPRMTIPHLSPTVPGSGSVLDGDPRILIPLPEVADRLGISRWQAYKLARSGRLRTTRLGARDLYVPAAVLRRIEHEGLPPAPESHGGELA
Ga0224452_101895223300022534Groundwater SedimentVTASLPSSTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEVA
Ga0224452_114290523300022534Groundwater SedimentMTTSHSVPSPTPASAGSVLDGEPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPESDGGEVG
Ga0222623_1000284863300022694Groundwater SedimentMTTPHPVPSPTPASAGSVLDGEPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPKSDGGEMG
Ga0222622_1001833263300022756Groundwater SedimentMTIPHLSPTVPGSGSVLDGDPRILIPLPEVADRLGISRWQAYKLARSGRLRTTRLGARDLYVPAAVLRRIEHEGLPPAPESHGGELA
Ga0222622_1060507313300022756Groundwater SedimentMTTPHPAPSTTPAGSVLDGDPRILIPLLEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPEP
Ga0207675_10207071523300026118Switchgrass RhizosphereLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPAPESDGGELA
Ga0208847_10174813300026673SoilMTTSHPAPSPTAPVSGSVLDGDPRVLIPLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPAPEGGEVA
Ga0209875_101172823300027209Groundwater SandVTAPHPSPTTTATGSVLDGDPRILIPLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPAVEGGETS
Ga0209874_101293743300027577Groundwater SandVTASHPVPSPTPAGSVLDGDPRILIPLPEVAERLGISRWQASSWPAPAASPPPGWAPDLHVPAAVLRRIEQEGLPPTPDGGGSS
Ga0209853_110698823300027961Groundwater SandLLDPGGARLLTASHPVPSPTLAGSVLDGDPRILIPLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPTPDGGEGA
Ga0307291_116822323300028707SoilMTTPHPAPAVPASGSVLDGDPRILIPLPEGAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPEPEGSVVA
Ga0307322_1013621723300028710SoilMTTPHPHPSPTEPGSGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPTEPEGGAMA
Ga0307285_1006768933300028712SoilPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA
Ga0307285_1008588523300028712SoilMTTQHSAPSPTPTMAAAGSVLDGDPRILIPLPEAAARLGISRWQAYKLASSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPEPEGSVVA
Ga0307313_1016824823300028715SoilGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEVA
Ga0307311_1017573123300028716SoilVTASRPSSTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGSEVA
Ga0307317_1006140933300028720SoilVTSSHFAATPAGSVFDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRR
Ga0307318_1009283013300028744SoilSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPTEPEGGAMA
Ga0307316_1014231123300028755SoilVTASRPSSTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGDVA
Ga0307320_1015756613300028771SoilVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRMPTTRLGARDLHVPAAVLRRIEQEGLPAAPEGGEVA
Ga0307320_1042409313300028771SoilPLPHSARVRIGVGWRPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGGEVA
Ga0307323_1025379223300028787SoilVTASLPSSTPAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEVA
Ga0307290_1000902493300028791SoilMTTPHPAPSTTPAGSVLDGDPRILIPLLEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPEPEGSEVA
Ga0307290_1003504853300028791SoilEPGSGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPTEPEGGAMA
Ga0307290_1005046523300028791SoilMTTPHPHPTPTPASAGSVLDGEPRILIPLPEVAQRLGISRWLAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPKSDGGEMG
Ga0307287_1005859723300028796SoilMTTQHSAPSPTPTMAAAGSVLDGDPRILIPLPEAAARLGISRWQAYKLASSGRLPTTRLGARDLHVPTAVLRRIEQQGLPPEPEGSVVA
Ga0307302_1001015043300028814SoilMTTTPYPSPTPIPAGSVLDGDPRVLIPLPEAAERLGISRWQAYKLARSGRLPTTRSGARDLHVPAAVLRRIEQEGLPPAPEGGEVA
Ga0307310_1059167523300028824SoilVTASRPSSTPAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPEGGEV
Ga0307314_1018376213300028872SoilMTAPHPSPIEHVSGSVLDGDPRILIPLPEAAERLGISRWQAYKLARFGSRDLHVPAAVLRRIEQEGLPPQPEGSVVA
Ga0307289_1017070723300028875SoilMTTPHPVPSPTPASAGSVLDGEPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGGEVT
Ga0307278_10000534183300028878SoilMSPHPAPSEPTSVFDGDPRVLIPIAEAAQRMGISLWHAYKLARSGRLPTTRPGKRDLFVPAAVLRRIEREGLPPEWGDVA
Ga0307278_1003293933300028878SoilVTTPHPSPTGAGSVLDGDPRILIPLPEAAARLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPTPDGGEGA
Ga0307278_1021888823300028878SoilMTTPHPSPTEPGSGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHEGLPPTEPEGGAVA
Ga0307300_1019217323300028880SoilMTTQHSAPSPTPTMAAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPESDGGE
Ga0307277_1009676323300028881SoilMTAPSSHPSPTAAGSGSVLDGDPRILIPLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAILRRIEQEGLPPAPEGGEVA
Ga0307277_1050664723300028881SoilAAGSVLDGDPRILIPLPEAAKRLGISRWQAYKLARCGRLPTTRLGARDLYVPAAVLRRIEHEGLPPTPEGGEVA
Ga0247826_1056821633300030336SoilPHPVPSPNPATSVLDGDPRILIPLPKAAARLGISRWQAYKLARSGRLPSTRLGARDLHVPAAVLRRIEQEGLPPAPEPEGGEVA
Ga0247826_1086645823300030336SoilGDPRVLIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPVPEGGEVA
Ga0268259_1002483013300030499AgaveMTTPHPAPAVPGSGSVLDGDPRILIPLPEAAERLAISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPTPESEGGEV
Ga0268255_1007752623300030516AgaveMTTSPPAPSPATPGSVLDGDPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGTRDLHVPAAVLRRIEQQGLPPTPDGGEGP
Ga0307408_10165653623300031548RhizosphereERRMTAPSSHPSPTAAGSGSVLDGDPRILIQLPEVAERLGISRWQAYKLARSGRLPTTRLGARDLHVPAAILRRIEREGLPPAPEGGEVA
Ga0307405_1007502663300031731RhizosphereVLDGDPRVLIPLPEAAQRLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPDSYGGEVA
Ga0307405_1026897243300031731RhizosphereMTIPHPSPTPAGSVLDGDPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPASEGGEVA
Ga0307405_1029855713300031731RhizosphereGGGGLVTASLPSSTPAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA
Ga0307405_1043115523300031731RhizosphereMTSPHPALSPTPGAAGSVLDGDPRILIPLPEAAERLGISRWQAYKLARCGRLPTTRLGARDLYVPAAVLRRIEQEGLPTALEGGEVA
Ga0307405_1056570223300031731RhizosphereMTTPHPAPTVPGSGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLLTTRLGARDLHVPAAVLRRIEQEGLPPAAESEGSVVA
Ga0307405_1130277523300031731RhizospherePFMTAPHPSPSVAAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPASESDEGEVP
Ga0307413_1095660723300031824RhizosphereVLDGDPRVLIPLPEAAQRLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEQEGL
Ga0307413_1215071023300031824RhizosphereMTTPHPSPTVPGSGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHKGLPPAPEPDGGELA
Ga0307410_1015012643300031852RhizosphereVTASLPSSTPAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA
Ga0307410_1041573623300031852RhizosphereMTTPHGGSSPAPGSAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEPEGGAVA
Ga0307410_1140914313300031852RhizosphereRLVTTFHPSPTAAGSGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARCGRLPTTRLGARDLYVPAAVLRRIEQEGLPPTPNGGEVA
Ga0307410_1212841123300031852RhizosphereMSTPYPSPTPAGSVLDGDPRILIPLPEAAERLGISRWQAYKLARCGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGGAVA
Ga0307406_1020659623300031901RhizosphereMTTPHPSPTGSGSVLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEHKGLPPAPEPDGGELA
Ga0307406_1210663023300031901RhizosphereVTTFHPSPTAAGSGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARCGRLPTTRLGARDLYVPAAVLRRIEQEGLPPTPNGGEVA
Ga0307407_1039277513300031903RhizosphereMTAPHPSPSVAAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPASESDEGEVP
Ga0307407_1067244323300031903RhizosphereMTTPHPSPTPTVAGSVLDGDPRILIPLPETAERLGISRWQAYKLARSGRLPTTRLGTRDLYVPAAVLRRIEHEGLPPAPESDGGEVA
Ga0307407_1075905213300031903RhizosphereLVTASLPSSTPAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPTAVLRRIEQEGLPPAPDGGEVA
Ga0307412_1015884433300031911RhizosphereMTTPHPAPAVPGSGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGGLHVPAAVLRRIEQEGLPPEPEGSVVA
Ga0307409_10238048223300031995RhizosphereMTIPHPSPTLPGSGSVLDGDPRILIPLPEAAERLGISRWQASKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGGEVA
Ga0307416_100000939253300032002RhizosphereMTTPHPAPVVPGSGSGSVLDGDPRILIPLPEAAERLGISRWQAYKLARSGRLPTTRLGARDLHVPVAVLRRIEHEGLPSEPEGGVVA
Ga0307416_10002147553300032002RhizosphereMTTPHPSPTSSAARSVLDGDPRVLIPLPEAAERLGISRWQAYRLARSGRLLTTRLGARDLYVPAAVLRRIEQEGLPQAPEDGEVA
Ga0307416_10043064323300032002RhizosphereMTTPHGGSSPAPGSAGSVLDGDPRVLIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGGAVA
Ga0307416_10160624423300032002RhizosphereMTAPHPSPSVAAAGSVLDGDPRILIPLPEAAQRLGISRWQAYKLAHSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEGG
Ga0307416_10332463423300032002RhizosphereMTTPHGGSSPAPGSAGSMLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLSVPAAVLRRIEQEGLPSEPEGGAVA
Ga0307414_1162132913300032004RhizospherePTPAGSVLDGDPRILIPLPEVAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPASEGGEVA
Ga0307415_10120571023300032126RhizosphereMTTPHGGSSPAPGSAGSMLDGDPRILIPLPEAAQRLGISRWQAYKLARSGRLPTTRLGARDLHVPAAVLRRIEQEGLPPAPEPEGGAVA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.