NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F054445

Metagenome / Metatranscriptome Family F054445

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F054445
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 90 residues
Representative Sequence DQGCRSDRGAGKAIELTWGGLRRVPISELREPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRAGDS
Number of Associated Samples 129
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.44 %
% of genes near scaffold ends (potentially truncated) 91.43 %
% of genes from short scaffolds (< 2000 bps) 93.57 %
Associated GOLD sequencing projects 129
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(30.714 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.286 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.91%    β-sheet: 0.00%    Coil/Unstructured: 70.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF00078RVT_1 17.14
PF08388GIIM 8.57
PF13091PLDc_2 0.71


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.00 %
UnclassifiedrootN/A10.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q02HHP9ZNot Available565Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10117667All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales649Open in IMG/M
3300000912|JGI12032J12867_1007072All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium667Open in IMG/M
3300001369|JGI12701J14581_1006056All Organisms → cellular organisms → Bacteria → Proteobacteria789Open in IMG/M
3300001867|JGI12627J18819_10477719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense511Open in IMG/M
3300002910|JGI25615J43890_1076120All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300003218|JGI26339J46600_10164481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae511Open in IMG/M
3300003505|JGIcombinedJ51221_10394152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae562Open in IMG/M
3300003505|JGIcombinedJ51221_10397880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae559Open in IMG/M
3300005163|Ga0066823_10113392All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium569Open in IMG/M
3300005179|Ga0066684_11072273Not Available516Open in IMG/M
3300005184|Ga0066671_10636499All Organisms → cellular organisms → Bacteria → Proteobacteria692Open in IMG/M
3300005332|Ga0066388_104558716All Organisms → cellular organisms → Bacteria → Proteobacteria705Open in IMG/M
3300005332|Ga0066388_104652537All Organisms → cellular organisms → Bacteria → Proteobacteria698Open in IMG/M
3300005338|Ga0068868_102304459Not Available514Open in IMG/M
3300005340|Ga0070689_101661898All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300005356|Ga0070674_102182305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae506Open in IMG/M
3300005363|Ga0008090_10250221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium606Open in IMG/M
3300005439|Ga0070711_101556839All Organisms → cellular organisms → Bacteria → Proteobacteria577Open in IMG/M
3300005548|Ga0070665_101991798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae586Open in IMG/M
3300005602|Ga0070762_10351728All Organisms → cellular organisms → Bacteria → Proteobacteria939Open in IMG/M
3300005602|Ga0070762_11285018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense508Open in IMG/M
3300005615|Ga0070702_101830512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae508Open in IMG/M
3300005616|Ga0068852_102678531All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae518Open in IMG/M
3300005617|Ga0068859_102013687All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005844|Ga0068862_102458599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae533Open in IMG/M
3300006046|Ga0066652_102022993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae513Open in IMG/M
3300006057|Ga0075026_100885126All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae547Open in IMG/M
3300006059|Ga0075017_101146167All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300006175|Ga0070712_101940813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae515Open in IMG/M
3300006354|Ga0075021_10454739All Organisms → cellular organisms → Bacteria → Proteobacteria808Open in IMG/M
3300006847|Ga0075431_101602246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae609Open in IMG/M
3300006914|Ga0075436_100942101All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300006918|Ga0079216_10375385All Organisms → cellular organisms → Bacteria → Proteobacteria881Open in IMG/M
3300006953|Ga0074063_14263058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium783Open in IMG/M
3300009089|Ga0099828_10658583All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300009100|Ga0075418_12252342All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300009146|Ga0105091_10322616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales757Open in IMG/M
3300010048|Ga0126373_10363594Not Available1462Open in IMG/M
3300010358|Ga0126370_10109996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae1928Open in IMG/M
3300010358|Ga0126370_12108123Not Available553Open in IMG/M
3300010361|Ga0126378_12780191Not Available559Open in IMG/M
3300010366|Ga0126379_11016933All Organisms → cellular organisms → Bacteria → Proteobacteria934Open in IMG/M
3300010366|Ga0126379_11883987All Organisms → cellular organisms → Bacteria → Proteobacteria701Open in IMG/M
3300010366|Ga0126379_13541004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium523Open in IMG/M
3300010398|Ga0126383_10693491All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300011333|Ga0127502_10542153All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300012205|Ga0137362_11028980All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300012212|Ga0150985_112733099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium786Open in IMG/M
3300012212|Ga0150985_123039411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae513Open in IMG/M
3300012362|Ga0137361_11694527All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300012469|Ga0150984_120944708All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300012909|Ga0157290_10094957All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300012912|Ga0157306_10146800All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300012930|Ga0137407_11629211All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300012930|Ga0137407_11993106All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300014884|Ga0180104_1110969All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300015245|Ga0137409_11169693All Organisms → cellular organisms → Bacteria → Proteobacteria609Open in IMG/M
3300015264|Ga0137403_11259384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense585Open in IMG/M
3300016387|Ga0182040_10483844All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300017939|Ga0187775_10011340All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae2279Open in IMG/M
3300017943|Ga0187819_10770927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae541Open in IMG/M
3300017970|Ga0187783_11036337All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300018465|Ga0190269_10824738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae672Open in IMG/M
3300018466|Ga0190268_10862610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium697Open in IMG/M
3300018469|Ga0190270_12321226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae598Open in IMG/M
3300019890|Ga0193728_1219417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales785Open in IMG/M
3300020067|Ga0180109_1243690All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300020170|Ga0179594_10382921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae534Open in IMG/M
3300020580|Ga0210403_10555921All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300021151|Ga0179584_1159584All Organisms → cellular organisms → Bacteria → Proteobacteria693Open in IMG/M
3300021327|Ga0214543_1067459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae518Open in IMG/M
3300021402|Ga0210385_10933556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense666Open in IMG/M
3300021432|Ga0210384_11689839All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae538Open in IMG/M
3300021478|Ga0210402_11613663All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300021559|Ga0210409_10218948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae1730Open in IMG/M
3300021560|Ga0126371_13469985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae532Open in IMG/M
3300022506|Ga0242648_1079008All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300022509|Ga0242649_1040570All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium628Open in IMG/M
3300022512|Ga0242676_1023581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium655Open in IMG/M
3300022529|Ga0242668_1075660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae646Open in IMG/M
3300022712|Ga0242653_1057717All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300022715|Ga0242678_1023808All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300022724|Ga0242665_10364933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae520Open in IMG/M
3300025464|Ga0208076_1007583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1797Open in IMG/M
3300025934|Ga0207686_11762966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae512Open in IMG/M
3300025939|Ga0207665_10662731All Organisms → cellular organisms → Bacteria → Proteobacteria819Open in IMG/M
3300026275|Ga0209901_1091440All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300026356|Ga0257150_1028360All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales799Open in IMG/M
3300026480|Ga0257177_1086206Not Available512Open in IMG/M
3300026823|Ga0207759_109762All Organisms → cellular organisms → Bacteria → Proteobacteria774Open in IMG/M
3300026831|Ga0207738_100810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium4623Open in IMG/M
3300026860|Ga0207823_104201All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300026869|Ga0207821_1003445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae1794Open in IMG/M
3300026881|Ga0207739_1008546All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300026942|Ga0207783_1015896All Organisms → cellular organisms → Bacteria → Proteobacteria747Open in IMG/M
3300026982|Ga0207854_1001191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3596Open in IMG/M
3300027014|Ga0207815_1033886All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300027063|Ga0207762_1013446Not Available1419Open in IMG/M
3300027069|Ga0208859_1041295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae539Open in IMG/M
3300028381|Ga0268264_11959025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae595Open in IMG/M
3300029701|Ga0222748_1100363Not Available563Open in IMG/M
3300030496|Ga0268240_10043497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae943Open in IMG/M
3300030620|Ga0302046_10257018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae1437Open in IMG/M
3300030852|Ga0075389_11372715All Organisms → cellular organisms → Bacteria → Proteobacteria827Open in IMG/M
3300030862|Ga0265753_1103624All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300030904|Ga0308198_1016051All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300030967|Ga0075399_10048901All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300030973|Ga0075395_10042021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium tianshanense569Open in IMG/M
3300030991|Ga0073994_12266776All Organisms → cellular organisms → Bacteria → Proteobacteria799Open in IMG/M
3300030998|Ga0073996_12293229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales535Open in IMG/M
3300031122|Ga0170822_13791753All Organisms → cellular organisms → Bacteria → Proteobacteria669Open in IMG/M
3300031469|Ga0170819_14456189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae549Open in IMG/M
3300031545|Ga0318541_10079563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LNHC221B001732Open in IMG/M
3300031677|Ga0307480_1008114All Organisms → cellular organisms → Bacteria → Proteobacteria696Open in IMG/M
3300031682|Ga0318560_10208433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1045Open in IMG/M
3300031718|Ga0307474_11155306All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300031751|Ga0318494_10626058All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300031777|Ga0318543_10526761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales529Open in IMG/M
3300031824|Ga0307413_11874326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae538Open in IMG/M
3300031847|Ga0310907_10267396All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300031947|Ga0310909_11503425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae536Open in IMG/M
3300031954|Ga0306926_13023811All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae501Open in IMG/M
3300031962|Ga0307479_11023302All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300032001|Ga0306922_10044682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium4565Open in IMG/M
3300032001|Ga0306922_11746286All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300032001|Ga0306922_12082163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae550Open in IMG/M
3300032004|Ga0307414_11769556All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300032005|Ga0307411_12349333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae501Open in IMG/M
3300032010|Ga0318569_10578750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae523Open in IMG/M
3300032044|Ga0318558_10670298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae518Open in IMG/M
3300032126|Ga0307415_102450162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales513Open in IMG/M
3300032261|Ga0306920_104072062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae529Open in IMG/M
3300033289|Ga0310914_11661515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae542Open in IMG/M
3300033551|Ga0247830_11496166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae540Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.43%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.29%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.86%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.14%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.14%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.14%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.14%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.14%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.43%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.43%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.43%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.43%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.71%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.71%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.71%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.71%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.71%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.71%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.71%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.71%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.71%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.71%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.71%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.71%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.71%
Root NodulesHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.71%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.71%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.71%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000912Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3EnvironmentalOpen in IMG/M
3300001369Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002910Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cmEnvironmentalOpen in IMG/M
3300003218Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020067Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021327Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2Host-AssociatedOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022529Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025464Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026275Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes)EnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026823Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)EnvironmentalOpen in IMG/M
3300026831Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 9 (SPAdes)EnvironmentalOpen in IMG/M
3300026860Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70 (SPAdes)EnvironmentalOpen in IMG/M
3300026869Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)EnvironmentalOpen in IMG/M
3300026881Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 15 (SPAdes)EnvironmentalOpen in IMG/M
3300026942Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)EnvironmentalOpen in IMG/M
3300026982Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 7 (SPAdes)EnvironmentalOpen in IMG/M
3300027014Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027063Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)EnvironmentalOpen in IMG/M
3300027069Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030496Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030852Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030967Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030973Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030998Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031677Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_073467602170459005Grass SoilRSGGRAGKAIELTWGGLRRVPISELREPQGDQTAAQESAEGIVGPAVGKASEALQGRKAEQQIGRAGNDGRRPERLGVASRTGDSGVVSGRRSSAHGLGTG
AF_2010_repII_A1DRAFT_1011766723300000597Forest SoilVASEGSAAQNRGLTNRNRISGILGRTSGRLTAKSQSINGQGCRSGRGAGKAIELTWGGLCHVPISELRAPRGVLTVAQKSADGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERWGVASRTGDS*
JGI12032J12867_100707223300000912Forest SoilSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
JGI12701J14581_100605613300001369Forest SoilGRCAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERLGVASRTGDS*
JGI12627J18819_1047771913300001867Forest SoilSISIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGGASRTGNS*
JGI25615J43890_107612013300002910Grasslands SoilSGRGAGKAIELTWGGLRRVPSSELGKPRGDPTAAQKSADGIVGQAVGKASEALQXRKAEQQIGRAGNDGRRPERLGVASRTGDS*
JGI26339J46600_1016448123300003218Bog Forest SoilITKSISIKDQGCRSDGGAGKAIELTWGGLRRVPISELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQPIGRAGNEGRRPERSGVASRTGDS*
JGIcombinedJ51221_1039415223300003505Forest SoilELTPGDLPRVASGRLRRPRGRLTAEQKSAEGVVGQAVGKASEALQRRKAEQQIGRAGNDGRRPERLGVASRTGNS*
JGIcombinedJ51221_1039788013300003505Forest SoilARRRSGGCAPKAIELTPGDLPRVASGRLRRPRGRLTAGQKSAEGILGQAVGKASEALQSRKAEQQIGRAGNGGRRPXRLGAASRTGDS*
Ga0066823_1011339233300005163SoilAGKAIELTWGGLRRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
Ga0066684_1107227313300005179SoilSISIKDQGCRSDRGAGKAIELTWGGLRCVPSSELGEPRGDPTAAQKSADGIVGQAVGKASEALQGRKTEQQIGRAGNDGRRPERLGVASRIGDS*
Ga0066671_1063649913300005184SoilAKRRSGGCAPKAIELTPGDLPRVASGRLRRSRGRLTAGQKSAEGVLGQAVGEASEALQRRKAEQQIGRAGNDGRRPERLGVASRTGDS*
Ga0066388_10455871613300005332Tropical Forest SoilSIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTTAQESADGIVGQAVGKASEALQGRKAEQQIGRAGNDGRRPERLGVASRPGDS*
Ga0066388_10465253723300005332Tropical Forest SoilSIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNEGRRPERLGVASRTGDS*
Ga0068868_10230445923300005338Miscanthus RhizosphereRHPWPDERATSREVHIHQGQGCRSGRCAGKAIELTWGGLRHVPNWELRQPQGDLTVTQESADGVVSHAVGKASEALQGRKAEQRIGRAGNDGRRPERSGAASRIGDS*
Ga0070689_10166189813300005340Switchgrass RhizosphereKAIELTWGGLRRVPLSELREPQGDLIRAQESADGIVGHAVGTASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS*
Ga0070674_10218230523300005356Miscanthus RhizosphereGAKRRSGGCAPKAIELTPGDLPRVASRRLRRSRGRLTAGQKSAEGVLGQAVGKASEALQGRKAEQQIGQAGNDGRRPERLGVASRTGDS*
Ga0008090_1025022113300005363Tropical Rainforest SoilAGKAIELTWGGLCHVPISELRAPRGVLTVAQKSADGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERWGVASRTGDS*
Ga0070711_10155683913300005439Corn, Switchgrass And Miscanthus RhizosphereRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
Ga0070665_10199179813300005548Switchgrass RhizosphereQGCRSGRGAGKAIGLTWGGLHHVPISELRESQDDLTVTQESAEGVVGDAVGKAGEALQSRKAEQRIGRAGNDHRRPERWEVASRTDNS*
Ga0070762_1035172813300005602SoilLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
Ga0070762_1128501813300005602SoilISIKDQGCRSDRGAGKAIELTWGGLRRVPSSELGKPRGDPTAAQKSAEGIVGQAVGKASEALQCRKAEQQIGRAGNDGQRPERVGVASRTGNS*
Ga0070702_10183051223300005615Corn, Switchgrass And Miscanthus RhizosphereGQGCRSGRCAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERLGVASRTGDS*
Ga0068852_10267853113300005616Corn RhizosphereAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERLGVASRTGDS*
Ga0068859_10201368713300005617Switchgrass RhizosphereCAGKAIELTWGGLRPVPILELGEPQGDLIRAQESADGIVGHAVGKASEALQGRKAEHRIGQAGNDDRRPERLEGAGRTGNS*
Ga0068862_10245859913300005844Switchgrass RhizosphereKSRSIKGQGCRSGRGAGKAIELTWGGLRPVPILELREPQGDLIRAQESADGIVGHAVGTASEALQGRKAEPRIGQAGNDDRRPERLEVAGRIGNS*
Ga0066652_10202299313300006046SoilGCRSGRCAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGIVGQAVGKASEALQSRKAEQQIGRAGNEG*
Ga0075026_10088512623300006057WatershedsSGRLITKSISIKDQGCRSDRGAGKAIELTWGGLRCVPSSELGEPRGDPTAAQKSADGIVGQAVGKASEALQGRKAEQQIGRAGNDGRRPERLGVASRIGDS*
Ga0075017_10114616723300006059WatershedsGKAIELTWGDLRGVPNSGLRDPRGDLTATQKSAEGIVTHAVGKAIEALQCRKVEQQIGRAGNGGRRPERLGVASRTGDS*
Ga0070712_10194081313300006175Corn, Switchgrass And Miscanthus RhizosphereKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGVVGQAVGKASEALQSGKAEKQIGRAGNDGRRPERLGVASRTGDS*
Ga0075021_1045473933300006354WatershedsSGRLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
Ga0075431_10160224623300006847Populus RhizosphereCRSGRCAGKAIELTWGGLRPVPILELGEPQGDLIRAQESADGIVGHAVGTASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS*
Ga0075436_10094210113300006914Populus RhizosphereDRRHPWPDERATSRKVHIHQGQGCRSGRCAGKAIELTWGGLRHVPNWELRRPQGDLTVTQESADGVVGYAVGKASEALQGRKAEQQIGQAGNDGRRPERLGVASRTGDS*
Ga0079216_1037538513300006918Agricultural SoilIAKSRSIKGQGCRSGRRAAKAIELTWGGLRRVPILELREPQGDLTGAQESADGIVGQAVGTASEALQGRKAEPRIGQAGNDGRRPERLEVAGRTGNS*
Ga0074063_1426305833300006953SoilSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
Ga0099828_1065858313300009089Vadose Zone SoilRTSGQRIAKSISIKGQDCRSGRRAGKAIELTWGGLRRVPISELRAPRGDLTAAQESAEGVVGQVVGEASEALQGRKAEQQIGQAGNDGRRPERLGVASRTGDS*
Ga0075418_1225234233300009100Populus RhizosphereGQGCRSGRCAGKAIELTWGGLRRVPLLELREPQGALIRAQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDGRRPERLEGAGRTGNS*
Ga0105091_1032261613300009146Freshwater SedimentGRCAGKAIELTWGGLRRVPNLELREPQGDLTGAQESAEGVVGDAVGKASEALQGRKAEQRIGRAGNDDRRPERLEVASRTGNS*
Ga0126373_1036359413300010048Tropical Forest SoilNRISGILGRTSGRLTAKSQSINGQGCRSGRGAAKAIELTWGGLCHVPISELRAPGGVLTMAQKSADGTVGQAVGKASEALQCRKAEQQIGRAGNDGRRPERLGVASRTGTS*
Ga0126370_1010999633300010358Tropical Forest SoilISIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNEGRRPERLGVASRTGDS*
Ga0126370_1210812313300010358Tropical Forest SoilEVASEGSAAQNRGLTNRNRISGILGRTSGRLTAKSQSINGQGCRSGRGAAKAIELTWGGLCHVPISELRAPGGVLTMAQKSADGTVGQAVGKASEALQCRKAEQQIGRAGNDGRRPERLGVASRTGTS*
Ga0126378_1278019123300010361Tropical Forest SoilCRSGRGAGKAIELTWGGLCHVPISELRTPRGVLTVAQKSADGIVGQAVGKASEALQRRKAEQQIGRAGNDG*
Ga0126379_1101693313300010366Tropical Forest SoilQNRGLTNRNRISGILGRTSGRLTAKSQSINGQGCRSGRGAAKAIELTWGGLCHVPISELRAPGGVLTMAQKSADGTVGQAVGKASEALQCRKAEQQIGRAGNDGRRPERLGVASRTGTS*
Ga0126379_1188398713300010366Tropical Forest SoilIELTPGDLPRVAIAATGTAERPSAARQKSAEGVVGQVVGKASEALQSRKAEQQIGRAGNDGQRPERVGVANRTGDS*
Ga0126379_1354100413300010366Tropical Forest SoilVASEGSAAQNRSLTNRNRISGILGRTSGRLAAKSGSINGQGCRSGRYAGKAIELTWGGLRHVPISELRALRGDLTVAQESADGVVGQAVGKASEALQSRKVEQQIGRAGNEG*
Ga0126383_1069349123300010398Tropical Forest SoilASEGSAAQNRGLTNRNRISGILGRTSGRLTAKSQSINGQGCRSGRGAAKAIELTWGGLCHVPISELRAPGGVLTMAQKSADGTVGQAVGKASEALQCRKAEHQIGRAGNDGRRPERLGVASRTGTS*
Ga0127502_1054215323300011333SoilAIELTWGGLRPVPLLELREPQGDLTGAQESADGIVGHAVGKAREALQRRKVEPRIGQAGNDDRRSERLEVAGRTGNS*
Ga0137362_1102898023300012205Vadose Zone SoilCAGKAIELTWGGLRHVPISELRPLRGGLTVAQESADGIVGQAVGKASEALQSRKAEQQIGRAGNEGRRPERLGVASRTGNS*
Ga0150985_11273309913300012212Avena Fatua RhizosphereVEQNRGLTNRNRISGISGRTSGRLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGEASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
Ga0150985_12303941123300012212Avena Fatua RhizosphereIAKSRSIKGQGCRSGRCAGKAIELTWGGLRRVPLLELRDPQGALTAAQESADGIVGQAVGKASEALQRRKAEPRIGQAGNDDRRPERLEVAGRTGNS*
Ga0137361_1169452713300012362Vadose Zone SoilTWGGLRHVPISELRPLRGGLTAAQESADGIVGHDVGKASEALQSRKAEQQIGRAGNDGRRPERLGVASRTGDS*
Ga0150984_12094470823300012469Avena Fatua RhizosphereRLIAKSRSIKGQGCRSGRCAGKAIELTWGGLRRVPLLELREPQGDLIRAQESADGIVGQAVGKASETLQGRKAEPRIGQAGNDDRRPERLEGAGRTGTS*
Ga0157290_1009495713300012909SoilILGRTSGRLIAKSRSIKGQGCRSGRGAAKAIELTWGGLRRVPILELREPQGDLIRAQESADGIVGHAVGTASEALQEAEPRIGQAGNDDRRPERLEVAGRTGTS*
Ga0157306_1014680013300012912SoilSGQRIAKARSIKGQGCRSGRCAGKAIELTWGGLRRVPLLELREPQGDLIRAQESADGIVGQAVGTASEALQGRKAEPRIGQAGNDDRRPERLEVAGRIGNS*
Ga0137407_1162921123300012930Vadose Zone SoilGKAIELTWGGLRHVPISELRAPRGALTVAQKSADGIVGQAVGKASEALQRRKAEQQIGRAGNEGRRPERLGVASRTGDS*
Ga0137407_1199310613300012930Vadose Zone SoilKSISIKDQGCRSDRGAGKAIELTWGGLRRVPSSELGKPRGDPTAAQKSAEGIVGQAVGEASEALQCRKAEQQIGRAGNDGQRPERVGVASRTGDS*
Ga0181521_1046161123300014158BogGRRAGKAIELTWGDLRRVPRSELREPRGDLTAAQKSAEGILGHDVGKASEALQDRKAEQRIGGTGNDG*
Ga0180104_111096913300014884SoilIELTWGDLRRVQISELRQPQGGLTATQESADGIVGQAVGKASEALQGRKAEQQIGRAGNDGRRPERLAVASRTGNS*
Ga0137409_1116969323300015245Vadose Zone SoilRTSGRLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS*
Ga0137403_1125938413300015264Vadose Zone SoilEQNRGLTNRNRISGISGRTSGRLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0182040_1048384413300016387SoilSIKGHGCRSGRCAGKAIELTWGGLCHVLISELRAPRGALTVAQKSADGIVGQDVGKASEALQRRKAEQQIGQAGNEGRRPERLGVASRTGDS
Ga0187848_1007282613300017935PeatlandGRRAGKAIELTWGDLRRVPRSELREPRGDLTAAQKSAEGILGHDVGKASEALQDRKAEQRIGGTGNDG
Ga0187775_1001134033300017939Tropical PeatlandMRHPRPDERATNREVHIIKGQGCRSGRGAGKAIELTWGGLRHVPVSELRAPRGALTVAQESAEGIVGQDVGKASEALQSREAEQQIGRAGNEGRRPERLGVASRTGDS
Ga0187819_1077092723300017943Freshwater SedimentCRSGRGAEKAIELTWGGLRHVPTLELREPQGDLTGAQESADGIVGHAVGKASEALQGRKAEQQIGRAGNDGRRPERLGAASRTGDS
Ga0187783_1103633723300017970Tropical PeatlandKCQGCRSGRCAGKAIELTWGGLRHVPISELRPPRGGLTAAQESADGVVGHAVGKASEALQRRKAEKQIGRAGNEGRRPKRLRVAIRTDDS
Ga0187873_114015313300018013PeatlandRRAGKAIELTWGDLRRVPRSELREPRGDLTAAQKSAEGILGHDVGKASEALQDRKAEQRIGGTGNDG
Ga0190269_1082473813300018465SoilSGQRIAKSRSIKGQRCRSGRCAGKAIELTWGGLRPVPILELGEPQGDLIRAQESADGIVGHAVGTASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS
Ga0190268_1086261023300018466SoilMRHPWPDERATDRESIKGQGCRSGRCAAKAIELTWGGLRPVPLLELREPQGDLIRAQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRIGNS
Ga0190270_1232122623300018469SoilAIELTWGGLRRVPLLELREPQGDLTRAQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS
Ga0193728_121941733300019890SoilLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0180109_124369013300020067Groundwater SedimentGNCARKATELTLGGLRRVPRLELRDSKGALTATQKSAEGIVGSAVGEAIEALQGRKAEQRIGQAGNEGRRPERLGAASRTDDS
Ga0179594_1038292113300020170Vadose Zone SoilIKDQGCRSDRGAGKAIELTWGGLRCVPSSELREPRGDPTAAQKSADGIVGQAVGKASEALQGRKTEQQIGRAGNDGRRPERLGVASRIGDS
Ga0210403_1055592123300020580SoilPGWTSGRLITKSISIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQRRKAEQRIGRAGNDGRRPERLGVASRTGDS
Ga0179584_115958413300021151Vadose Zone SoilKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0214543_106745923300021327Root NodulesIELTWGGLRHVPTLELGEPQGDPTMTQESAEGVVGDAVGKASEALQGRKAEQRIGRAGNDDRRPERLEVANRTGNS
Ga0210385_1093355613300021402SoilRFGDSSGRGAGKAIELTWGGLCRVPISELREPRGDLTARQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0210384_1168983923300021432SoilKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQRRKAEQRIGRAGNDGRRPERLGVASRTGDS
Ga0210402_1161366313300021478SoilRSGRCAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGILGQAVGKASEALQGRKAEQQIGRAGNDGRRPERLGVASRTGDS
Ga0210409_1021894813300021559SoilSGRCAVKAIELTWGDLRRVPKSELGKPRGDPTAAQKSAEGIVGQAVGKASEALQGRKAEQQIGRTGNDDRRPERLRAASRTGDS
Ga0126371_1346998523300021560Tropical Forest SoilSIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTTAQESADGIVGQAVGKASEALQGRKAEQQIGRAGNEG
Ga0242648_107900813300022506SoilIELTWGGLRHVPISELRPLRGGLTVAQESAEGVVGQAVGKASEALQSGKAEKQIGRAGNDGRRPERLGVASRTGDS
Ga0242649_104057013300022509SoilVGDYHNSISIKDQGCRSDRGAGKAIELTWGGLWRVPISELGEPRGDPTAAQESAEGIVGQAVGTASEALQDRKAEQQIGRAGNDGRRPERLGVASRTGDS
Ga0242676_102358113300022512SoilTKSISIKDQGCRSDRGAGKAIELTWGGLRRVPSSELGKPRGDPTAAQKSAEGIVGQAVGKASEALQCRKAEQQIGRAGNGGQRPERVGVASRTDGNAADDPVLTGFGTDAPG
Ga0242668_107566023300022529SoilSIKDQGCRSDRGAGKAIELTWGGLRCVPSSELGEPRGDPTAAQKSADGIVGQAVGKASEALQGRKTEQQIGRAGNDGRRPERLGVASRIGDS
Ga0242653_105771723300022712SoilIRGIPGRTNAQRVAKSISIKGQGCRSGRRAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGVVGQAVGKASEALQSGKAEKQIGRAGNDGRRPERLGVASRTGDS
Ga0242678_102380823300022715SoilPESIKGHGCRSGRCAGKAIELTWGGLRHVPICERRAPRGALTVAQKSAEGVVGQAAGKASEALQAERLSEQIGRAGNEGRRPERLGVASRTGDS
Ga0242665_1036493323300022724SoilGKAIEVTWGGLRCVPSSELGEPRGDPTAAQKSADGIVGQAVGKASEALQGRKTEQQIGRAGNDGRWPERLGVASRIGDS
Ga0208076_100758333300025464Arctic Peat SoilRKATELTPGGLHRVPSSELRASQGVLTAVQKSAEGILGQAVGKANEALQSRKAEKQIGRAGNEGRRPERLRVAIRTGDS
Ga0208188_102425513300025507PeatlandSGRRAGKAIELTWGDLRRVPRSELREPRGDLTAAQKSAEGILGHDVGKASEALQDRKAEQRIGGTGNDG
Ga0207686_1176296613300025934Miscanthus RhizosphereRSGRCAGKAIELTWGGLRPVPLLELREPQGDLIRAQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRIGNS
Ga0207665_1066273113300025939Corn, Switchgrass And Miscanthus RhizosphereQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIDRAGNDGRRPERLGVASRTGDS
Ga0209901_109144013300026275Permafrost SoilVKAIELTWGDLRRVPKSELGKPRGDPTAAQKSADGIVGQLVGKVSEALQGRKAEQQIGRSGNDGRRPERSRAASRMGQLMSGKRQ
Ga0257150_102836033300026356SoilKDQGCRSDRGAGKAIELTWGGLRRVPSSELGKPRGDPTAAQKSAEGIVGQAVGKASEALQCRKAEQQIGRAGNDGQRPERVGVASRTGDS
Ga0257177_108620613300026480SoilSGRTSGRLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0207759_10976213300026823Tropical Forest SoilIRGISGRTSGRLITKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGVVGQAVGKASEALQGRKAEQQIGQAGNDGPKARTIGSGK
Ga0207738_10081013300026831Tropical Forest SoilKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGVVGQAVGKASEALQGRKAEQQIGQAGNDGPKARTIGSGK
Ga0207823_10420123300026860Tropical Forest SoilLITKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGVVGQAVGKASEALQGRKAEQQIGQAGNDGPKARTIGSGK
Ga0207821_100344523300026869Tropical Forest SoilRRKRRTSGQRIAKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGVVGQAVGKASEALQGRKAEQRIGRAGNEG
Ga0207739_100854623300026881Tropical Forest SoilSGQRIAKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGVVGQAVGKASEALQGRKAEQQIGQAGNDGPKARTIGSGK
Ga0207783_101589613300026942Tropical Forest SoilRTSGQRIAKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGIVGQAVGKASEALQGRKAEQQIGQAGNDGPKARTIGSGK
Ga0207854_100119143300026982Tropical Forest SoilTSGQRIAKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGIVGQAVGKASEALQGRKAEQQIGQAGNDGPKARTIGSGK
Ga0207815_103388613300027014Tropical Forest SoilDQGCRSDRGAGKAIELTWGGLRRVPISELREPRGDLTAAQESADGIVGQAVGKAEALHSRKAEQWIGRAGNDGRRPERLGVASRIGDS
Ga0207762_101344613300027063Tropical Forest SoilRTSGQRIAKSISIKDQGCRSGRGAGKAIELTWGDLRRVPISELREPRGDLITAQESADGVVGQAVGKASEALQGRKAEQQIGQAGNDGPKARTIGSGK
Ga0208859_104129513300027069Forest SoilGCRSDRGAGKAIELTWGGLRCVPSSELGEPRGDPTAAQKSADGIVGQAVGKASEALQGRKTEQQIGRAGNDGRRPERLGVASRIGDS
Ga0268264_1195902513300028381Switchgrass RhizosphereSGRGAGKAIELTWGGLRPVPLLELREPQGDLIRTQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS
Ga0222748_110036313300029701SoilELTWGGLWRVPISELGEPRGDPTAAQESAEGIVGQAVGTASEALQDRKAEQQIGQAGNDGRRPERLGEGSRTGDS
Ga0268240_1004349723300030496SoilVKAIELTWGGLRRVPLLELREPQGDLIRAQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGTS
Ga0302046_1025701813300030620SoilGAGKAIELTWGGLRRVPILELRKPQGDPTAAQESAEGIVGQAVGKASEALQGRKAEQWIGRAGNDDRRPERLAVASRTGNS
Ga0075389_1137271513300030852SoilGCRSGRCAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERLGVASRTGDS
Ga0265753_110362413300030862SoilGRGAGKAIELTWGGLCRVPISELREPRGDLTARQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0308198_101605123300030904SoilMTAKPKSIKCTVGKSDGCASKAVELTWGGLRRVPSSELGKPRGDPTAAQKSAEGIVGQAVGKASEALQCRKAEQQIGRAGNDGQRPERVGVASRPGDS
Ga0075399_1004890113300030967SoilSPQSINGQGCRSGRCAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGIVGQAVGKASEALQSGKAEKQIGRAGNDGRRPERLGVASRTGDS
Ga0075395_1004202113300030973SoilLTNRNRISGISGRTSGRLIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0073994_1226677623300030991SoilRTSGQRIAKSISIKGQGCRSGRGAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQQIGRAGNDGRRPERLGVASRTGDS
Ga0073996_1229322913300030998SoilAGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0170822_1379175323300031122Forest SoilSISIKGQGCRSGRGEGKAIELTWGGLCRVPISELREPRGDLTATQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRTGNS
Ga0170819_1445618913300031469Forest SoilKSISIKDQGCRSDRGAGKAIELTWGGLRRVPSSELGKPRGDPTAAQKSAEGIVGQAVGKASEALQCRKAEQQIGRAGNDGQRPERVGVASRTGNS
Ga0318541_1007956313300031545SoilKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTTAQESADGIAGQAVGKASEALQGRKAEQRIGRAGNEG
Ga0307480_100811423300031677Hardwood Forest SoilGQGCRSGRGAGKAIELTWGGLRHVPISELRPLRGGLTVAQESAEGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERLGVASRTGDS
Ga0318560_1020843313300031682SoilIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTTAQESADGIAGQAVGKASEALQGRKAEQRIGRAGNEG
Ga0307474_1115530613300031718Hardwood Forest SoilCARKAAELTPGGLLRVPTSELRASQGVLTADQKSAEGILGQAVGKANEALQSRKAEKQIGRAGNEGRRPERLRVAIRTDDS
Ga0318494_1062605813300031751SoilAIELTWGGLCHVLISELRAPRGALTVAQKSADGIVGQDVGKASEALQRRKAEQQIGRAGNEGRRPERLGVASRTGDS
Ga0318543_1052676113300031777SoilEVASEGSAAQNRGLTNRNRISGILGRTSGRLTAKSQSINGQGCRSGRGAGKAIELTWGGLCHVPISELRAPRGVLTVAQKSADGIVGQAVGKASEALQSRKAEQQIGRAGNDGRRPERWGVASRTGDS
Ga0307413_1187432613300031824RhizosphereRCAGKAIELTWGGLRRVPLLELREPQGDLIRAQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS
Ga0310907_1026739623300031847SoilIELTWGGLRRVPILELREPQGALTTAQESADGIVGHAVGKASEALQGRKAEQRIGQAGNDDRRPERLEVAGRIGNS
Ga0310909_1150342523300031947SoilDQGCRSDRGAGKAIELTWGGLRRVPISELREPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNDGRRPERLGVASRAGDS
Ga0306926_1122036913300031954SoilRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTTAQESADGIAGQAVGKASEALQGRKAEQRIGRAGNEG
Ga0306926_1302381123300031954SoilITKSISIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNEGRRPERLGVASRTGDS
Ga0307479_1102330213300031962Hardwood Forest SoilIELTWGGLRCVPSSELREPRGDPTAAQKSADGIVGQAVGKASEALQGRKTEQQIGRAGNDGRRPERLGVASRIGDS
Ga0306922_1004468213300032001SoilDAGKAIELTWGGLRRVPISELRPPRGDLTAAQESAEGIVGQALGKASEALQGRKAEQRIGRAGNDGRRPERSGAASRIGDS
Ga0306922_1174628623300032001SoilIKDQGCRSDGGAGKAIELTWGGLRRVPNSELRAPRGDLTAAQESADGIVGQAVGKASEALQGRKAEQRIGRAGNEGRRPERLGVASRTGDS
Ga0306922_1208216323300032001SoilRLTAKSRSINGQGCRSGRCAGKAIELTWGGLRHVPISELRTPRGALTVAQESADGIVGQDVGKASEALQGGKAEQQIGRAGNDGRRPERLGVASRTGDS
Ga0307414_1176955613300032004RhizosphereRCAGKAIELTWGGLRRVPILELREPQGDLTAAQESADGIVGHAVGTAREALQGRKAEHRIGQAGNDGRRPERLEVAGRTGNS
Ga0307411_1234933323300032005RhizosphereGGLRRVPILELREPQGDLTAAQESADGIVGHAVGTAREALQGRKAEHRIGQAGNDGRRPERLEVAGRTGNS
Ga0318569_1057875013300032010SoilTLGGLRHVPISELRAPRGALTVAQKSADGIVGQDVGKASEALQRRKAEQQIGRAGNEGRRPERLGVASRTGDS
Ga0318558_1067029813300032044SoilSISIKDQGCRSDRGAGKATELTWGGLRCVPSSELGEPRGDPTAAQKSADGIVGHDVGKASEALQGRKTEQQIGRAGNDGRRPERLGGASRIGDS
Ga0307415_10245016223300032126RhizosphereILGRTSGRLIAKSRSIKGQGCRSGRCAGKAIELTWGGLRRVPLLELREPQGDLIRAQESADGIVGQAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS
Ga0306920_10407206213300032261SoilKGQVCRSGGCAGKAIELTWGGLRRVPKLELGKPRGDPTAAQKSADGIVAVGKASEALQGRKAEQQIGRAGNDGRRPERLGVASRIGDS
Ga0310914_1166151523300033289SoilGHGCRSGRCAGKAIELTWGGLRHVPISELRAPRGALTVAQKSADGIVGQDVGKASEALQRRKAEQQIGRAGNEGRRPERLGVANRTGDS
Ga0247830_1149616623300033551SoilAKSRSIKGQGCRSGRGAGKAIELTWGGLRPVPLLELREPQGDLIRAQESADGIVGHAVGKASEALQGRKAEPRIGQAGNDDRRPERLEVAGRTGNS

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