Metagenome / Metatranscriptome Family F054322

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054322
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	73 residues
Representative Sequence	MMRASFLCIVIGTFVLGASAAYAQSVKPKSPGEIKGASTGIAERNEDCRRQAREQHLHLLKRYRFMRDCKRQ
Number of Associated Samples	106
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.10 %
% of genes near scaffold ends (potentially truncated)	32.86 %
% of genes from short scaffolds (< 2000 bps)	81.43 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.286 % of family members)
Environment Ontology (ENVO)	Unclassified (37.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 64.00% β-sheet: 0.00% Coil/Unstructured: 36.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00027	cNMP_binding	15.00
PF01740	STAS	10.71
PF01464	SLT	5.00
PF04392	ABC_sub_bind	3.57
PF03807	F420_oxidored	3.57
PF00916	Sulfate_transp	2.86
PF00389	2-Hacid_dh	2.14
PF00892	EamA	0.71
PF10129	OpgC_C	0.71
PF00484	Pro_CA	0.71
PF01928	CYTH	0.71
PF06472	ABC_membrane_2	0.71
PF00872	Transposase_mut	0.71
PF01116	F_bP_aldolase	0.71
PF00723	Glyco_hydro_15	0.71
PF00171	Aldedh	0.71
PF01668	SmpB	0.71
PF01546	Peptidase_M20	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.57
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	2.86
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	2.86
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	2.86
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.71
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	0.71
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.71
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.71
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.29 %
Unclassified	root	N/A	35.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.29 %
Unclassified	root	N/A	35.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.29 %
Unclassified	root	N/A	35.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.71 %
Unclassified	root	N/A	35.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.71 %
Unclassified	root	N/A	35.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.86 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.57 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.71 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	15.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.14 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	15.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.14 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.71 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	15.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.57 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.71 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.71 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16530014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3679	Open in IMG/M
2228664021\|ICCgaii200_c0637236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	614	Open in IMG/M
2228664021\|ICCgaii200_c0637762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	563	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1005968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2321	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10052483	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300000956\|JGI10216J12902_116670726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1207	Open in IMG/M
3300001867\|JGI12627J18819_10011784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3459	Open in IMG/M
3300002906\|JGI25614J43888_10026004	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300004268\|Ga0066398_10035855	Not Available	934	Open in IMG/M
3300005163\|Ga0066823_10035633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	845	Open in IMG/M
3300005332\|Ga0066388_100501249	All Organisms → cellular organisms → Bacteria → Proteobacteria	1850	Open in IMG/M
3300005332\|Ga0066388_101722006	Not Available	1110	Open in IMG/M
3300005332\|Ga0066388_102309532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	973	Open in IMG/M
3300005332\|Ga0066388_102441650	Not Available	949	Open in IMG/M
3300005332\|Ga0066388_103146014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300005332\|Ga0066388_104258611	Not Available	729	Open in IMG/M
3300005332\|Ga0066388_104443287	Not Available	714	Open in IMG/M
3300005332\|Ga0066388_106473012	Not Available	590	Open in IMG/M
3300005332\|Ga0066388_107145977	Not Available	561	Open in IMG/M
3300005356\|Ga0070674_101760195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	561	Open in IMG/M
3300005363\|Ga0008090_10051555	All Organisms → cellular organisms → Bacteria → Proteobacteria	1000	Open in IMG/M
3300005435\|Ga0070714_100050333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3548	Open in IMG/M
3300005549\|Ga0070704_101949891	Not Available	545	Open in IMG/M
3300005713\|Ga0066905_100181278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1554	Open in IMG/M
3300005713\|Ga0066905_100268190	Not Available	1322	Open in IMG/M
3300005713\|Ga0066905_100525839	Not Available	988	Open in IMG/M
3300005764\|Ga0066903_100512410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2038	Open in IMG/M
3300005764\|Ga0066903_100769720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1714	Open in IMG/M
3300005764\|Ga0066903_101547603	Not Available	1255	Open in IMG/M
3300005764\|Ga0066903_103800719	Not Available	811	Open in IMG/M
3300005764\|Ga0066903_103977203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	793	Open in IMG/M
3300005764\|Ga0066903_104694829	Not Available	727	Open in IMG/M
3300005764\|Ga0066903_107251542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300005764\|Ga0066903_108891706	Not Available	509	Open in IMG/M
3300005983\|Ga0081540_1027022	All Organisms → cellular organisms → Bacteria	3261	Open in IMG/M
3300006028\|Ga0070717_10065562	All Organisms → cellular organisms → Bacteria	3019	Open in IMG/M
3300006172\|Ga0075018_10235894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300006175\|Ga0070712_100026143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3885	Open in IMG/M
3300006178\|Ga0075367_10860065	Not Available	578	Open in IMG/M
3300006845\|Ga0075421_101127841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	879	Open in IMG/M
3300006904\|Ga0075424_100071434	All Organisms → cellular organisms → Bacteria	3635	Open in IMG/M
3300006914\|Ga0075436_100247930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1268	Open in IMG/M
3300007076\|Ga0075435_101683526	Not Available	557	Open in IMG/M
3300007255\|Ga0099791_10541783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300007258\|Ga0099793_10039665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2039	Open in IMG/M
3300009088\|Ga0099830_10492447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300009098\|Ga0105245_12313656	Not Available	591	Open in IMG/M
3300009162\|Ga0075423_10540636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1226	Open in IMG/M
3300010046\|Ga0126384_11133751	Not Available	718	Open in IMG/M
3300010046\|Ga0126384_12015497	Not Available	552	Open in IMG/M
3300010047\|Ga0126382_10904573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	764	Open in IMG/M
3300010048\|Ga0126373_10494395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1265	Open in IMG/M
3300010048\|Ga0126373_11225660	Not Available	816	Open in IMG/M
3300010048\|Ga0126373_12312140	Not Available	598	Open in IMG/M
3300010359\|Ga0126376_10000398	All Organisms → cellular organisms → Bacteria → Proteobacteria	20986	Open in IMG/M
3300010359\|Ga0126376_10061359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2707	Open in IMG/M
3300010362\|Ga0126377_11741013	Not Available	698	Open in IMG/M
3300010366\|Ga0126379_10448247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1351	Open in IMG/M
3300010366\|Ga0126379_10481867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1308	Open in IMG/M
3300010366\|Ga0126379_12062426	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300010373\|Ga0134128_11318265	Not Available	796	Open in IMG/M
3300010376\|Ga0126381_100694356	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300010376\|Ga0126381_102456321	Not Available	747	Open in IMG/M
3300010396\|Ga0134126_12304476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	587	Open in IMG/M
3300010400\|Ga0134122_10764224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	917	Open in IMG/M
3300010403\|Ga0134123_10994981	Not Available	853	Open in IMG/M
3300011270\|Ga0137391_10316957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1343	Open in IMG/M
3300012200\|Ga0137382_11138645	Not Available	556	Open in IMG/M
3300012202\|Ga0137363_10200769	Not Available	1599	Open in IMG/M
3300012205\|Ga0137362_11530308	Not Available	554	Open in IMG/M
3300012208\|Ga0137376_10663302	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300012208\|Ga0137376_11008674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300012362\|Ga0137361_11229066	Not Available	672	Open in IMG/M
3300012582\|Ga0137358_10583444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300012917\|Ga0137395_10098564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1939	Open in IMG/M
3300012951\|Ga0164300_10082377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1368	Open in IMG/M
3300012955\|Ga0164298_11365274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	546	Open in IMG/M
3300012957\|Ga0164303_10243913	Not Available	1025	Open in IMG/M
3300012958\|Ga0164299_10870412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	650	Open in IMG/M
3300012960\|Ga0164301_11518705	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012961\|Ga0164302_10768669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	723	Open in IMG/M
3300012961\|Ga0164302_11518221	Not Available	553	Open in IMG/M
3300012984\|Ga0164309_10449627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300012984\|Ga0164309_11280239	Not Available	619	Open in IMG/M
3300012985\|Ga0164308_10176148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1607	Open in IMG/M
3300012987\|Ga0164307_10223290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1298	Open in IMG/M
3300012988\|Ga0164306_10408054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1023	Open in IMG/M
3300012988\|Ga0164306_11175564	Not Available	642	Open in IMG/M
3300012989\|Ga0164305_11633641	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300015371\|Ga0132258_10986453	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300015373\|Ga0132257_102030547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	742	Open in IMG/M
3300016357\|Ga0182032_11303110	Not Available	627	Open in IMG/M
3300016445\|Ga0182038_10276836	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300020199\|Ga0179592_10255028	Not Available	787	Open in IMG/M
3300020579\|Ga0210407_10133271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1907	Open in IMG/M
3300020579\|Ga0210407_10550066	Not Available	901	Open in IMG/M
3300021168\|Ga0210406_11143864	Not Available	570	Open in IMG/M
3300021405\|Ga0210387_10064158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2988	Open in IMG/M
3300021478\|Ga0210402_10776671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300021479\|Ga0210410_11439544	Not Available	582	Open in IMG/M
3300021560\|Ga0126371_11707691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300021560\|Ga0126371_12489978	Not Available	626	Open in IMG/M
3300024288\|Ga0179589_10092533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1223	Open in IMG/M
3300025915\|Ga0207693_10015159	All Organisms → cellular organisms → Bacteria	6186	Open in IMG/M
3300026304\|Ga0209240_1003360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	6054	Open in IMG/M
3300026354\|Ga0257180_1035264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300026490\|Ga0257153_1011927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1742	Open in IMG/M
3300026514\|Ga0257168_1089165	Not Available	685	Open in IMG/M
3300026551\|Ga0209648_10070809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2934	Open in IMG/M
3300026551\|Ga0209648_10470008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300027603\|Ga0209331_1118689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	640	Open in IMG/M
3300027654\|Ga0209799_1011644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1890	Open in IMG/M
3300027874\|Ga0209465_10007826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4707	Open in IMG/M
3300027909\|Ga0209382_11114832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	814	Open in IMG/M
3300028881\|Ga0307277_10000751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12335	Open in IMG/M
3300031543\|Ga0318516_10211786	Not Available	1120	Open in IMG/M
3300031543\|Ga0318516_10276803	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300031545\|Ga0318541_10012422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3873	Open in IMG/M
3300031573\|Ga0310915_10021490	All Organisms → cellular organisms → Bacteria	3925	Open in IMG/M
3300031640\|Ga0318555_10680571	Not Available	556	Open in IMG/M
3300031713\|Ga0318496_10552242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	636	Open in IMG/M
3300031723\|Ga0318493_10163370	Not Available	1159	Open in IMG/M
3300031769\|Ga0318526_10037075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1810	Open in IMG/M
3300031780\|Ga0318508_1049779	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300031833\|Ga0310917_10589186	Not Available	755	Open in IMG/M
3300031879\|Ga0306919_10884277	Not Available	685	Open in IMG/M
3300031890\|Ga0306925_10516744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300031912\|Ga0306921_12618428	Not Available	520	Open in IMG/M
3300031945\|Ga0310913_10092069	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300031947\|Ga0310909_10122625	Not Available	2113	Open in IMG/M
3300031947\|Ga0310909_11484900	Not Available	540	Open in IMG/M
3300032001\|Ga0306922_11307590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300032043\|Ga0318556_10022684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2829	Open in IMG/M
3300032064\|Ga0318510_10241737	Not Available	739	Open in IMG/M
3300032091\|Ga0318577_10059583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1729	Open in IMG/M
3300032094\|Ga0318540_10021838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2679	Open in IMG/M
3300032180\|Ga0307471_100441768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1438	Open in IMG/M
3300032261\|Ga0306920_101676068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	902	Open in IMG/M
3300033289\|Ga0310914_10424754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1203	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.71%
Host-Associated	Host-Associated	9.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.00%
Plants	Host-Associated → Plants	9.29%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.14%
Sediment	Environmental → Aquatic → Sediment	0.71%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.57%
Loam	Environmental → Terrestrial → Soil → Loam	21.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.43%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00521710	2088090014	Soil	MRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRH
ICCgaii200_06372362	2228664021	Soil	MRASFIYIVIGSFVLGVFAAHGQSVKPKSPGEITKASTDIAERNENCRRQAREQHLHLVKRYRFMRDCKRH
ICCgaii200_06377621	2228664021	Soil	MRASFIYIVIGSFVLGVFAAHGQSVKPKSPGEITKASTDIAERNENCRRQAREQHLHLLSRHRFLRDCKRQ
AF_2010_repII_A100DRAFT_10059681	3300000655	Forest Soil	MMRALFLRVAIGTCTAISLAASAANAQSVKPKYPGEIAAASERIAERNEYCRRQARAQHLHLVK
AF_2010_repII_A001DRAFT_100524831	3300000793	Forest Soil	MMRALFLRVAIGTCAAISLVASIASAQSVKPKYPGEIAAASDRIAERNENCRRQARAQHLHLVKRYRFMRDCKRQ*
JGI10216J12902_1166707262	3300000956	Soil	MGDMTMRASFVYIVIGTFALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMHECKRQ*
JGI12627J18819_100117842	3300001867	Forest Soil	MRASFIYIVIGSFALGVFAAHGQSAKPKSPGEITKASTDIAERNENCRLQAREQHLHLLSRHRFLRDCKRH*
JGI25614J43888_100260042	3300002906	Grasslands Soil	MQPRARTRVDEREGRMKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP*
Ga0066398_100358552	3300004268	Tropical Forest Soil	VVIATFTLATWAADAQLVKQKSPAEIAAASTRIAQRNEDCRRQAREQHLHLLKRYRFMRDCKRQ*
Ga0066823_100356332	3300005163	Soil	MGDMTMRASFAYVVIGTFALGALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRECKRQ*
Ga0066388_1005012492	3300005332	Tropical Forest Soil	MMMRTLFWCVVIATFTLATWAADAQLVKQKSPAEIAAASTRIAQRNEDCRRQAREQHLHLLKRYRFMRDCKRQ*
Ga0066388_1017220062	3300005332	Tropical Forest Soil	MNSIHFTNRALHYTGGMMMRTLFWCVVIATFTLATCAADAQLVKPKSPAEIAASSNRIAQQNEDCRRQAREQHLHLLKRYRFMRDCKRQRQ*
Ga0066388_1023095322	3300005332	Tropical Forest Soil	MTMRALFLRVAIATCAAISLGASAANAQPVKPKSPAEIAAASDRIAQRNEYCRRQAREQNLHFLKRYRFMRDCKRQ*
Ga0066388_1024416501	3300005332	Tropical Forest Soil	MRALFLRVAIATCTAISLGASAANAQSMKPKYPGEIAAASDRIAQVNEQCRSLARAQHLHLLKRYRFMRDCKQHER*
Ga0066388_1031460142	3300005332	Tropical Forest Soil	MSRALFLRIAIGICTAISLGASAANAQSVKPKYPGEIAAASDHIARVNEDCRRQARAQHLHLLKRYRFMRDCKRQ*
Ga0066388_1042586112	3300005332	Tropical Forest Soil	MMRALCLRVGIGAFVAISLGAAAYAQSTTPKYPKEIAAASDRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRRP*
Ga0066388_1044432872	3300005332	Tropical Forest Soil	MMRALFLRVAIGTCTAISLAASTANAQSVKPRYPGEIAAASDRIAERNEYCRRQARAQHLHLVKRYRFMRD
Ga0066388_1064730121	3300005332	Tropical Forest Soil	MMMRALFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAASNHIAQVNEDCRRQAREQHLHL
Ga0066388_1071459771	3300005332	Tropical Forest Soil	LGIVIGILVLGASAAYAQSVKPKYPREIKAASTSIAERNENCRRQAQEQHLHLVKRYRFMRDCKRQRQ*
Ga0070674_1017601951	3300005356	Miscanthus Rhizosphere	MRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITEASAHIAQRNENCRRQAREQHLHLLN
Ga0008090_100515551	3300005363	Tropical Rainforest Soil	MRALFLRVAIGTCAAISLAASAANAQSVKPKYPGEIAAVSDRIAERNENCRRQARAQHLHLVKRYRFMRD
Ga0070714_1000503332	3300005435	Agricultural Soil	MRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSRHRFLRDCKRQ*
Ga0070704_1019498911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLVKRYRFMRNCKRQ*
Ga0066905_1001812783	3300005713	Tropical Forest Soil	MIGTFVLGASAAYAQSLKPKSPGDIKAASISIAERNEDCRRQAREQHLHLIKRYRFMRDCKRQ*
Ga0066905_1002681903	3300005713	Tropical Forest Soil	MMRASFLCIVIGIFVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRPRP*
Ga0066905_1005258391	3300005713	Tropical Forest Soil	MRALFLRVAIGTCTAISLAASAANAQSVKPKYPGEIAAASDRIAERNENCRRQARAQHLHLV
Ga0066903_1005124102	3300005764	Tropical Forest Soil	MSKFLLAACVFGTCTAISLGISAANAQSMKPKYPGEIAAASGRIAQMNEHCRSLARAQHLHLLKRYRFMRDCKEHNRPAQ*
Ga0066903_1007697201	3300005764	Tropical Forest Soil	VIGTFVLGASAAYAQSVKPKSPGEIKAASTSIAERNEDCRRQAREQHLHFIKRYRFMRDCKRQ*
Ga0066903_1015476031	3300005764	Tropical Forest Soil	MRVLIVVAAAWFAVVGLCSAAYAQPVKPKSPGEIAAASNHIAQRNEDCRRQAREQHLHLIKR
Ga0066903_1038007192	3300005764	Tropical Forest Soil	MMRASFVCIVIGTSVLCASATYAQSVKPRYPREIKAASTSIVERNEDCRRQAREQHLHLLKRYRFMRDCKRQGQ*
Ga0066903_1039772031	3300005764	Tropical Forest Soil	MRTLFWCVVIATFTLATWAADAQLVKQKSPAEIAAASTRIAQRNEDCRRQAREQHLHLLKRYRFMRDCKRQ*
Ga0066903_1046948291	3300005764	Tropical Forest Soil	MMRALFLRVVIGTCTAISLVASAANAQSVKPRYPGEIAAASDRIAERNEYCRRQARAQHLHLVKRYRFMRD
Ga0066903_1072515423	3300005764	Tropical Forest Soil	MMRASFVCIVIGISVLCASATYAQSVKPRYPSEIKAASTSIAERNEDCRRQAREQHLHLLKRYRFMR
Ga0066903_1088917061	3300005764	Tropical Forest Soil	MMRALFLRVAIGTCAAISLAASIASAQSVKPKYPGEIAAASDRIAERNENCRRQARAQHLHLVK
Ga0081540_10270223	3300005983	Tabebuia Heterophylla Rhizosphere	MRTLFWCVVTATCTLVTCAADAQLAKPKSPADITASSNRIAQRNEDCRRQARKQHLHLLKRYRFMRDCKRQ*
Ga0070717_100655622	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTVRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSRHRFLRDCKRQ*
Ga0075018_102358942	3300006172	Watersheds	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFM
Ga0070712_1000261433	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRH*
Ga0075367_108600651	3300006178	Populus Endosphere	MRASFIYIVIGSFALGVFAAHGQSAKPKSPGEITKASTDIAERNENCRRQAREQHLHLLS
Ga0075421_1011278412	3300006845	Populus Rhizosphere	MRASFIYIVIGSFALGVFAAHGQSAKPKSPGEITKASTDIAERNENCRRQAREQHLHLLSRHRFLRDCKRH*
Ga0075424_1000714343	3300006904	Populus Rhizosphere	MRTLFWCIVTATLALVTCAADAQGAKPKSPADVAASSNRIAQRNEDCRRQAREQHLHLLKRYRFMRDCKRQ*
Ga0075436_1002479301	3300006914	Populus Rhizosphere	MRASFVYVVIGTFALGALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLH
Ga0075435_1016835262	3300007076	Populus Rhizosphere	MGDMMMRASFVYVVIGTFALGAFGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRDCKRQ*
Ga0099791_105417832	3300007255	Vadose Zone Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVK
Ga0099793_100396653	3300007258	Vadose Zone Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAENNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP*
Ga0099830_104924472	3300009088	Vadose Zone Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP*
Ga0105245_123136562	3300009098	Miscanthus Rhizosphere	MTMRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSRHRFLRDCKRH*
Ga0075418_110347471	3300009100	Populus Rhizosphere	MGGFALGAFAAHGQSVHPKSPGEITKASAHIAQRNENCRRQAREQHLHLLSRYRF
Ga0075423_105406362	3300009162	Populus Rhizosphere	MGDMTMMRASFVYVVIGTFALGALGVFAAHGQSVKPKSPGEITKASAHIAQRNENCRRQAREQHLHLLSRY
Ga0126384_111337512	3300010046	Tropical Forest Soil	MMRASFLCIVIGIFVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRQRQLEAPAILAAMDGS
Ga0126384_120154971	3300010046	Tropical Forest Soil	MMMRALFLRVAIGTCTAISLAASAANAQSVKPKYPGEIAATSERIAERNENCRRQAREQHLHLVKRYRFMRDCKRQ*
Ga0126382_109045731	3300010047	Tropical Forest Soil	MWEEMMMRALFLRVAIGTCTAISLVASAANAQSVKARYPGEIVAASDRIAERNEYCRRQARAQHLHLVKRYRFMRDCKRQ*
Ga0126373_104943951	3300010048	Tropical Forest Soil	MRTLFWCVVIATFTLATCAADAQLVKPKSPAEIAASSNRIAQQNEDCRRQAREQHLHLLKRYRFMRDCKRQRQ*
Ga0126373_112256602	3300010048	Tropical Forest Soil	MRAWFLGIVIGILVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRQRP*
Ga0126373_123121401	3300010048	Tropical Forest Soil	MVIGTFVLGASAAYAQSLKPKSPGDIKAASISIAERNEDCRRQAREQHLHFIKRYRFMRDCKRGAAVSTVP*
Ga0126376_100003986	3300010359	Tropical Forest Soil	MMMRTLFWCVVIATFTLATWAADAQLVKQKSPAEIAAASTRIAQRNEGCRRQAREQHLHLLKRYRFMRDCKRQ*
Ga0126376_100613592	3300010359	Tropical Forest Soil	MMRASFLCIVIGTFVLGASAAYAQSVKPKSPGEIKGASTGIAERNEDCRRQAREQHLHLLKRYRFMRDCKRQ*
Ga0126377_117410131	3300010362	Tropical Forest Soil	MMRASFVCIVIGTSVLCASATYAQSVKPRYPREIKAASTSIAERNEDCRRQAREQHLHLLKRYRFMRDCKRQGQ*
Ga0126379_104482471	3300010366	Tropical Forest Soil	MMRASFLCIVIGIFVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRQRQLEAPAILAAMDGSDEQIFGVNEQIPVLGQSD*
Ga0126379_104818672	3300010366	Tropical Forest Soil	MRASFLCIAIGTFALGASAAEAQSQKPKYPSEIAAASTRIAQRNENCRRQARERHLHLLKRYRFMRDCKRQ*
Ga0126379_120624261	3300010366	Tropical Forest Soil	MMRALFLRVAIGTCTAISLAGSAANAQSVKLKYPGEIAAASDRIAERNEYCRRQARARHLHLVKRYRFMRDCKRQ*
Ga0134128_113182652	3300010373	Terrestrial Soil	MMMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLLSRHRFLRDCKRQ*
Ga0126381_1006943561	3300010376	Tropical Forest Soil	MIRASFLGIVIGIFVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRPRP*
Ga0126381_1024563211	3300010376	Tropical Forest Soil	MNSIHFTNRALHYTGGMMMRTLFWCVVIATFTLATCAADAQLVKPKSPAEIAASSNRIAQQNEDCRRQAREQHLHLLKRYRFMRDLRQRQ*
Ga0134126_123044762	3300010396	Terrestrial Soil	MTMRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSRHRFLRGCKRQ*
Ga0134122_107642242	3300010400	Terrestrial Soil	MMMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRQ*
Ga0134123_109949812	3300010403	Terrestrial Soil	MTMRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSRHRFLRDCKRQ*
Ga0137391_103169572	3300011270	Vadose Zone Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP*
Ga0137382_111386452	3300012200	Vadose Zone Soil	MGGVTMRALSVCVVIGTFALGVFAAHGQSVKQKYPGEIAATSDRMAQVNEHCRRLARAQHLHLLKRYRFMRDCKRQ*
Ga0137363_102007691	3300012202	Vadose Zone Soil	MMMRALFLRVAIGTFAAISLGVSAAHAESVKPKSPGEIAAASNRIAQRNEDCKRQAQEQHLLRDCKRRQP*
Ga0137362_115303082	3300012205	Vadose Zone Soil	MGDMTMRASFVYVVIGTFALGVFAAHAQSVKPKYPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRECKRQ*
Ga0137376_106633022	3300012208	Vadose Zone Soil	MRALSVCVVIGTFALGVFAAHGQSVKPKYLGEITKASGHIAQRNENCRRQAREQHLQKGLGCTVA*
Ga0137376_110086741	3300012208	Vadose Zone Soil	MKMKASFLRVVIGAFAAISLGAFAAHAQSVKPKSPAEIAAENNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKR
Ga0137361_112290661	3300012362	Vadose Zone Soil	RLGASARMNECERKIMMRALFLRVAIGTCAAISLGASAADAQSVKPKYPAEIKAASSRIAERNEDCRRPAQEQHLHLLKRYLFMRDCKRKRAVSALRYTLF*
Ga0137358_105834441	3300012582	Vadose Zone Soil	GRMKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAENNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP*
Ga0137395_100985642	3300012917	Vadose Zone Soil	MMRVLFLRVAIGTCTAISLGAAAANAQSVKPKSPGEMAAASERIAERNENCRRQAREQHLHLVKRYHLMRDCKRQ*
Ga0164300_100823772	3300012951	Soil	MRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSRHRFLRDCKRH*
Ga0164298_113652742	3300012955	Soil	MRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLSRHRFLRDCKRQ*
Ga0164303_102439131	3300012957	Soil	MMRASSVYLVIGTLALGIFAAHGQSLKPKDPAEVTKASEHIAQRNENCRRLARAQHLHFLKRYRFMRDCKRQ*
Ga0164299_108704121	3300012958	Soil	MTMRASFIYIVIGSFALGVFAAHGQSAKPKSPGEITKASTDIAERNENCRRQAREQHLHLLSRHRFLRDCKRH*
Ga0164301_115187052	3300012960	Soil	LALGIFAAHGQSLKPKDPAEVTKASEHIAQRNENCRRLARAQHLHFLKRYRFMRDCKRQ*
Ga0164302_107686692	3300012961	Soil	MMMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRH*
Ga0164302_115182211	3300012961	Soil	GYRGSAAIVYTQDAQFIPMGDMTMKASFVYVVIGTFALGALGIFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRECKRQ*
Ga0164309_104496272	3300012984	Soil	MMMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASNNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRH*
Ga0164309_112802391	3300012984	Soil	MGDMRMRASFVYVVIGTFALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRECKRQ*
Ga0164308_101761482	3300012985	Soil	MGDMTMKASFVCIAIGSFALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRECKRQ*
Ga0164307_102232902	3300012987	Soil	MMMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRRP*
Ga0164306_104080542	3300012988	Soil	MTMRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSR
Ga0164306_111755642	3300012988	Soil	HGGMMMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRH*
Ga0164305_116336411	3300012989	Soil	TFALGALGIFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRECKRQ*
Ga0132258_109864532	3300015371	Arabidopsis Rhizosphere	MGDMTMMRASFVYIVIGGFALGAFAAHGQSVHPKFPGEITKASAHIAQRNENCRRQAREQHLHLLSRYRFMRDCKRG*
Ga0132257_1020305472	3300015373	Arabidopsis Rhizosphere	MRKFISTGDMTMRASFIYIVIGSFALGVFAAHGQSAKLKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRDCKRQ*
Ga0182032_113031102	3300016357	Soil	MMMRAVFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVKRYRFMRNCRRQ
Ga0182038_102768363	3300016445	Soil	MMRAVFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVKRYRFMHDCKRQ
Ga0179592_102550281	3300020199	Vadose Zone Soil	MQPRARTRVDEREGRMKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAENNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0210407_101332712	3300020579	Soil	MKASFVCIAIGSFALGVFAAHGQSVKPKSPGEITKANAHIAQRNENCRRQAREQHLHLLNRYRFMRDCKRQ
Ga0210407_105500662	3300020579	Soil	MRASSVYLVIGTLALGIFAAHGQSLKPKDPAEVTKASEHIAQRNENCRRLARAQHLHFLKRYRFMRDCKRQ
Ga0210406_111438641	3300021168	Soil	MMRALFLRVIIGTCTAISLGVSAANAQSVKPKSPGEIAAASDRIARVNEDCRRQARAQHLHLL
Ga0210387_100641582	3300021405	Soil	MKASFVCIAIGSFALGVFAAHGQSVKPKSPGEITKASAHIAQRNENCRRQAREQHLHLLNRYRFMRDCKRQ
Ga0210402_107766711	3300021478	Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRCMRDCKRRP
Ga0210410_114395442	3300021479	Soil	MKASFVCIAIGSFALGVFAAHGQSVKPKSPGEITKASADIAQRNENCRRQAREQHLHLLSRHRFLRDCKRQ
Ga0126371_117076911	3300021560	Tropical Forest Soil	MMRASFLCIVIGIFVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCK
Ga0126371_124899782	3300021560	Tropical Forest Soil	MSRALFLRIAIGICTAISLGASAANAQSVKPNYPGEIAAASDHIARVNEDCRRQARAQHLHLLKRYRFMRDCKRQ
Ga0179589_100925332	3300024288	Vadose Zone Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAENNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0207693_100151598	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MMMRTLFWCVVTATFALVTCAAAAQLVKPKSPAEIAASSNRIAQRNEDCRHQAREQHLHLVKRYRFMRDCKRH
Ga0209240_10033602	3300026304	Grasslands Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0257180_10352641	3300026354	Soil	MQPRARTRVDEREGRMKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFIRDCKRR
Ga0257153_10119272	3300026490	Soil	MKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAENNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0257168_10891651	3300026514	Soil	MQPRARTRVDEREGRMKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0209648_100708094	3300026551	Grasslands Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAENNRIAQQNEDCRRQAREQHLHLVKRYR
Ga0209648_104700082	3300026551	Grasslands Soil	FAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0209331_11186891	3300027603	Forest Soil	MRASFAYVVIGTFALGALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLL
Ga0209799_10116444	3300027654	Tropical Forest Soil	CVVIATFTLATWAADAQLVKQKSPAEIAAASTRIAQRNEDCRRQAREQHLHLLKRYRFMRDCKRQ
Ga0209465_100078264	3300027874	Tropical Forest Soil	MMRASFLCIVIGIFVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRQRQ
Ga0209382_111148321	3300027909	Populus Rhizosphere	MRASFIYIVIGSFALGVFAAHGQSAKPKSPGEITKASTDIAERNENCRRQAREQHLHLLSRHRFLRDCKRH
Ga0307277_100007512	3300028881	Soil	MRASFIYIVIGSFALGVFAAHGQSVKPKSPGEITKASAEIAQRNENCRRQAQEQHLHLLSRHRFLRDCKRH
Ga0318516_102117861	3300031543	Soil	MMMRAVFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVKRYRFMRNCKRQ
Ga0318516_102768031	3300031543	Soil	MRTLVWCVVIATFTLATRAADAQLVKPKSPAEIAASSNRIAQQNEDCRRQAREQHLHLLKRYRFMRDCKRQRQ
Ga0318541_100124222	3300031545	Soil	MRALCLRIGIGTFAAFSLATVAYAQSTTPKHPKEIAAESNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0310915_100214904	3300031573	Soil	MMRAVFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVKRYRFMRNCKRQ
Ga0318555_106805711	3300031640	Soil	VFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVKRYRFMRNCKRQ
Ga0318496_105522422	3300031713	Soil	MRALCLRIGIGTFAAFSLATVAYAQSTTPKHPKEIAAESNRIAQRNEDCRRQAREQHLHLVKRYRFMRD
Ga0318493_101633702	3300031723	Soil	MMMRTLVWCVVIATFTLATRAADAQLVKPKSPAEIAASSNRIAQQNEDCRRQAREQHLHLLKRYRFMRDCKRQRQ
Ga0318526_100370753	3300031769	Soil	MRAWFLGIVIGILVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRQRQ
Ga0318508_10497793	3300031780	Soil	MMRAVFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVK
Ga0310917_105891862	3300031833	Soil	MRVLIVVAAAWFAVVGLCSTAYAQPVKPKSPGEIVAASNHIAQRNEDCRRQAREQHLHLIKRYRFMRD
Ga0306919_108842771	3300031879	Soil	MRVLIVVAAAWFAVVGLCSTAYAQPVKPKSPGEIVAASNHIAQRNEDCRRQAREQHLHLIKRYRFMRDCKREDTGQRQ
Ga0306925_105167442	3300031890	Soil	VVAAAWFAVVGLCSTAYAQPVKPKSPGEIVAASNHIAQRNEDCRRQAREQHLHLIKRYRFMRDCKREDTGQRQ
Ga0306921_126184281	3300031912	Soil	MMMRALFLRVAIGTCGAISLGASAANAQLVKPKYPGEIAAASNHIAQVNEDCRRQAREQHLHLVKRYRFM
Ga0310913_100920691	3300031945	Soil	MMMRAVFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVKRY
Ga0310909_101226251	3300031947	Soil	MRVLIVVAAAWFAVVGLCSTAYAQPVKPKSPGEIVAASNHIAQRNEDCRRQAREQHLHLIKRYLFMRDCKRRPFTQSARVVPDTGQRQ
Ga0310909_114849001	3300031947	Soil	MMMRALFLRVAIGTCGAISLGASAANAQLVKPKYPGEIAAASNHIAQVNEDCRRQAREQHLHLV
Ga0306922_113075902	3300032001	Soil	MGDMTMRASFAYVVIGTFALGALGVFAAHGQSVKPKSPGEITKASAHIAQRNEDCRRQAREQHLHLLNRYRFMRDCKRQ
Ga0318556_100226844	3300032043	Soil	MMRAWFLGIVIGILVLGASAAYAQSVKPKYPREIKAASTSIAERNEDCRRQAREQHLHLVKRYRFMRDCKRQRQ
Ga0318510_102417371	3300032064	Soil	MMMRAVFLRVAIGTCAAISLGASAANAQLVKPKYPGEIAAVSNHIAQVNEDCRRQAREQHLHLVKRYRFMRDCKRQ
Ga0318577_100595831	3300032091	Soil	MMRALFLRVAIGTCTAISLVASAANAQSVKPKYPGEIAAASDRIAERNENCRRQARAQHLHLVK
Ga0318540_100218381	3300032094	Soil	IMRALCLRIGIGTFAAFSLATVAYAQSTTPKHPKEIAAESNRIAQRNEDCRRQAREQHLHLVKRYRFMRDCKRRP
Ga0307471_1004417682	3300032180	Hardwood Forest Soil	MKMKASFLRVVIGAFAAISLGASAAHAQSVKPKSPAEIAAESNRIAQQNEDCRRQAREQHLHL
Ga0306920_1016760682	3300032261	Soil	MRALFLCIAIGTFALGASAADAQSVRPKYPGEIATASQRIAQRNEDCRRQAREQHLHLLKRYRFIRDCKRQ
Ga0310914_104247542	3300033289	Soil	MMRASFVCIVIGTSVLCASATYAQSVKPTYPREIKAASTSIAERNEDCRRQAREQHLHLLKRYRFMRDCKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054322

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences