NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F054306

Metagenome / Metatranscriptome Family F054306

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054306
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 51 residues
Representative Sequence YVIETRTDTHAIISRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT
Number of Associated Samples 114
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.14 %
% of genes near scaffold ends (potentially truncated) 90.71 %
% of genes from short scaffolds (< 2000 bps) 88.57 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.571 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.429 % of family members)
Environment Ontology (ENVO) Unclassified
(27.857 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.286 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 26.25%    Coil/Unstructured: 73.75%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF00313CSD 10.71
PF03734YkuD 3.57
PF04828GFA 2.86
PF00476DNA_pol_A 1.43
PF14018DUF4234 1.43
PF04402SIMPL 1.43
PF12840HTH_20 1.43
PF00271Helicase_C 1.43
PF13302Acetyltransf_3 1.43
PF00583Acetyltransf_1 1.43
PF13683rve_3 0.71
PF01230HIT 0.71
PF08241Methyltransf_11 0.71
PF09851SHOCT 0.71
PF00487FA_desaturase 0.71
PF12697Abhydrolase_6 0.71
PF07690MFS_1 0.71
PF00441Acyl-CoA_dh_1 0.71
PF00009GTP_EFTU 0.71
PF03006HlyIII 0.71
PF04545Sigma70_r4 0.71
PF02559CarD_CdnL_TRCF 0.71
PF01370Epimerase 0.71
PF00085Thioredoxin 0.71
PF13185GAF_2 0.71
PF01844HNH 0.71
PF02801Ketoacyl-synt_C 0.71
PF13191AAA_16 0.71
PF00196GerE 0.71
PF13426PAS_9 0.71
PF05593RHS_repeat 0.71
PF00107ADH_zinc_N 0.71
PF02156Glyco_hydro_26 0.71
PF00027cNMP_binding 0.71
PF07992Pyr_redox_2 0.71
PF01345DUF11 0.71
PF01828Peptidase_A4 0.71
PF00211Guanylate_cyc 0.71
PF13551HTH_29 0.71
PF08448PAS_4 0.71
PF03706LPG_synthase_TM 0.71
PF013675_3_exonuc 0.71
PF00999Na_H_Exchanger 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 3.57
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 3.57
COG3791Uncharacterized conserved proteinFunction unknown [S] 2.86
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 1.43
COG3471Predicted secreted (periplasmic) proteinFunction unknown [S] 1.43
COG2859Outer membrane channel-forming protein BP26/OMP28, SIMPL familyCell wall/membrane/envelope biogenesis [M] 1.43
COG2968Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domainFunction unknown [S] 1.43
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.71
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.71
COG4124Beta-mannanaseCarbohydrate transport and metabolism [G] 0.71
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.71
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.71
COG3209Uncharacterized conserved protein RhaS, contains 28 RHS repeatsGeneral function prediction only [R] 0.71
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.71
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.71
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.71
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.71
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 0.71
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.71
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 0.71
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 0.71


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.57 %
UnclassifiedrootN/A6.43 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2119805009|FNTS007_contig02529All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales541Open in IMG/M
2124908007|FWIRElOz_GKZ9IRQ02FWN6NAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
2166559006|FI_contig11567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium952Open in IMG/M
2170459017|G14TP7Y01DFFUCAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
2228664022|INPgaii200_c0820046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia706Open in IMG/M
3300000955|JGI1027J12803_108834537All Organisms → cellular organisms → Bacteria1713Open in IMG/M
3300001686|C688J18823_11085362All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300002568|C688J35102_120146487Not Available899Open in IMG/M
3300004081|Ga0063454_101407340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria591Open in IMG/M
3300004081|Ga0063454_101492895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300004114|Ga0062593_102278076Not Available609Open in IMG/M
3300004114|Ga0062593_102673068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300005093|Ga0062594_100817570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria865Open in IMG/M
3300005169|Ga0066810_10130280All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium584Open in IMG/M
3300005171|Ga0066677_10797899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300005178|Ga0066688_10308499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1022Open in IMG/M
3300005179|Ga0066684_10299159Not Available1068Open in IMG/M
3300005184|Ga0066671_10348297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium940Open in IMG/M
3300005184|Ga0066671_10397797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria881Open in IMG/M
3300005187|Ga0066675_10289338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1182Open in IMG/M
3300005327|Ga0070658_10016479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5915Open in IMG/M
3300005327|Ga0070658_10685843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium889Open in IMG/M
3300005336|Ga0070680_100109786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2295Open in IMG/M
3300005336|Ga0070680_100501045All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300005344|Ga0070661_100064192All Organisms → cellular organisms → Bacteria2698Open in IMG/M
3300005440|Ga0070705_101438373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300005444|Ga0070694_101456930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium579Open in IMG/M
3300005538|Ga0070731_10179998All Organisms → cellular organisms → Bacteria1403Open in IMG/M
3300005559|Ga0066700_11061329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300005566|Ga0066693_10355323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300005587|Ga0066654_10893994All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300005616|Ga0068852_101683928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium657Open in IMG/M
3300005616|Ga0068852_102499078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300005764|Ga0066903_100161710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3249Open in IMG/M
3300005891|Ga0075283_1001544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2834Open in IMG/M
3300005891|Ga0075283_1034705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium834Open in IMG/M
3300005903|Ga0075279_10040017All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300006028|Ga0070717_11691962Not Available573Open in IMG/M
3300006173|Ga0070716_100001364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria10840Open in IMG/M
3300006175|Ga0070712_102012478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria506Open in IMG/M
3300006358|Ga0068871_101040602Not Available764Open in IMG/M
3300006806|Ga0079220_11489538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales580Open in IMG/M
3300006853|Ga0075420_101757847All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006854|Ga0075425_102452098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria578Open in IMG/M
3300006954|Ga0079219_10828752All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300006954|Ga0079219_12101757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Gemmobacter → Gemmobacter tilapiae541Open in IMG/M
3300009098|Ga0105245_13155396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300009174|Ga0105241_10565013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1023Open in IMG/M
3300009789|Ga0126307_11623255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300009840|Ga0126313_10100385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella2127Open in IMG/M
3300009840|Ga0126313_11738744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria521Open in IMG/M
3300010036|Ga0126305_10065503All Organisms → cellular organisms → Bacteria2104Open in IMG/M
3300010037|Ga0126304_10420500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria894Open in IMG/M
3300010039|Ga0126309_10796293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300010039|Ga0126309_10946143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300010040|Ga0126308_10864248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium629Open in IMG/M
3300010041|Ga0126312_10599883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae791Open in IMG/M
3300010041|Ga0126312_11090348All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300010042|Ga0126314_10117695Not Available1824Open in IMG/M
3300010042|Ga0126314_11235851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium559Open in IMG/M
3300010067|Ga0127432_138316All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300010303|Ga0134082_10188560All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300010322|Ga0134084_10066573All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300010375|Ga0105239_11893676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium692Open in IMG/M
3300012209|Ga0137379_10239197All Organisms → cellular organisms → Bacteria1729Open in IMG/M
3300012209|Ga0137379_11684616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300012212|Ga0150985_100110468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria931Open in IMG/M
3300012212|Ga0150985_106693885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria706Open in IMG/M
3300012386|Ga0134046_1290574All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300012469|Ga0150984_103854773Not Available1194Open in IMG/M
3300012469|Ga0150984_112816657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium552Open in IMG/M
3300012469|Ga0150984_123691261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1643Open in IMG/M
3300012511|Ga0157332_1072730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300012901|Ga0157288_10198489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria638Open in IMG/M
3300012951|Ga0164300_10729864All Organisms → cellular organisms → Bacteria → Terrabacteria group604Open in IMG/M
3300012957|Ga0164303_10386466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300012957|Ga0164303_10740995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium668Open in IMG/M
3300012960|Ga0164301_10295950All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300012972|Ga0134077_10420445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium580Open in IMG/M
3300012975|Ga0134110_10152063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium956Open in IMG/M
3300012977|Ga0134087_10020289All Organisms → cellular organisms → Bacteria2425Open in IMG/M
3300013307|Ga0157372_10994954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium971Open in IMG/M
3300013307|Ga0157372_11018503All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300013307|Ga0157372_11764094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium712Open in IMG/M
3300013832|Ga0120132_1032518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium963Open in IMG/M
3300014302|Ga0075310_1076606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria683Open in IMG/M
3300014325|Ga0163163_12665841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300015356|Ga0134073_10324578All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300015371|Ga0132258_10117210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6319Open in IMG/M
3300015371|Ga0132258_11921471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1490Open in IMG/M
3300015372|Ga0132256_100429109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1426Open in IMG/M
3300015373|Ga0132257_101660044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium818Open in IMG/M
3300018431|Ga0066655_10700117All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300018431|Ga0066655_11345793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300018433|Ga0066667_10029993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3042Open in IMG/M
3300018482|Ga0066669_10182107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1586Open in IMG/M
3300018482|Ga0066669_10949966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi773Open in IMG/M
3300019867|Ga0193704_1005296All Organisms → cellular organisms → Bacteria2548Open in IMG/M
3300020070|Ga0206356_10079461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1439Open in IMG/M
3300021363|Ga0193699_10480598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300022717|Ga0242661_1165642Not Available504Open in IMG/M
3300023077|Ga0247802_1062552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300024286|Ga0247687_1001819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2554Open in IMG/M
3300025909|Ga0207705_10774662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300025910|Ga0207684_10827163All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300025920|Ga0207649_10674185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium800Open in IMG/M
3300025921|Ga0207652_10064252All Organisms → cellular organisms → Bacteria3176Open in IMG/M
3300025921|Ga0207652_11047735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium715Open in IMG/M
3300025929|Ga0207664_10152594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1963Open in IMG/M
3300025938|Ga0207704_11212708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300025939|Ga0207665_10353078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1110Open in IMG/M
3300025949|Ga0207667_10170435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2237Open in IMG/M
3300026078|Ga0207702_10636713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1048Open in IMG/M
3300026078|Ga0207702_10865868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium895Open in IMG/M
3300026109|Ga0208774_1021454All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300026142|Ga0207698_10773038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium961Open in IMG/M
3300026295|Ga0209234_1290289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300027821|Ga0209811_10025851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1941Open in IMG/M
3300027869|Ga0209579_10360221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium787Open in IMG/M
3300027991|Ga0247683_1019955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300028710|Ga0307322_10000582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7262Open in IMG/M
3300028711|Ga0307293_10050804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A11287Open in IMG/M
3300028711|Ga0307293_10128423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia806Open in IMG/M
3300028714|Ga0307309_10052433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium891Open in IMG/M
3300028778|Ga0307288_10039818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1588Open in IMG/M
3300028778|Ga0307288_10338938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300028824|Ga0307310_10188906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium968Open in IMG/M
3300028828|Ga0307312_10373547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium934Open in IMG/M
3300028881|Ga0307277_10420039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300028884|Ga0307308_10276553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium804Open in IMG/M
3300031082|Ga0308192_1086627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300031096|Ga0308193_1081424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300031366|Ga0307506_10045959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1249Open in IMG/M
3300031938|Ga0308175_100448943Not Available1359Open in IMG/M
3300031939|Ga0308174_10273237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1322Open in IMG/M
3300031996|Ga0308176_11508440All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300032002|Ga0307416_101862434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium705Open in IMG/M
3300032074|Ga0308173_11170064All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300033412|Ga0310810_10612232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1042Open in IMG/M
3300034447|Ga0370544_17952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.43%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil8.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.14%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.29%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.29%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.86%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.86%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.14%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.14%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.14%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.14%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.43%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.43%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.43%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.43%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.71%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.71%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.71%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.71%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.71%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.71%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.71%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.71%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2119805009Soil microbial communities from sample at FACE Site NTS_007 Nevada Test SiteEnvironmentalOpen in IMG/M
2124908007Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2EnvironmentalOpen in IMG/M
2166559006Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembledEnvironmentalOpen in IMG/M
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005891Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_304EnvironmentalOpen in IMG/M
3300005903Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010067Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300014302Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6EnvironmentalOpen in IMG/M
3300024286Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026109Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405 (SPAdes)EnvironmentalOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027991Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031082Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031096Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034447Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FNTS007_049094202119805009SoilTLETRTDTHAIIFRRPKGLRRFTSGDDPGRFVVEVDEDGHVTMREAEPRRS
FWIRElOz_004797802124908007SoilFLDQRIAEGYRIETRTDTHAIISRRPKGLKRFRSGADPGRYVVEVDEDGTATMRPAEPRR
FI_004955902166559006Grass SoilVIETRTDTHAIVSRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT
4ZMR_047130002170459017Switchgrass, Maize And Mischanthus LitterMAGDIDYAIIALRPRGLRRFTSGDDPGRYVVEVDEDGVATMRPAEPRRS
INPgaii200_082004622228664022SoilTHAIISRRPKGLKRFTSGADAGRYVVEVDEAGAATMRPAEPRRT
JGI1027J12803_10883453733300000955SoilAIETRSETHAIISRRPKGLKRFTSGADAGRYVVEVDEAGAATMRPAEPRRT*
C688J18823_1108536213300001686SoilRRPKGLKRFTSGADPGRYVVEVDEDGVVRMRPAEPRRT*
C688J35102_12014648713300002568SoilDTHAIISQRPKGLKRFRSGADSGRYVVEVDEDGSVTMRPAEPRRS*
Ga0063454_10140734013300004081SoilLDQKVQEGYAIETRSDTHAIIFRRPKGLKRFTSGPDPGRYVVQVNEDGIATLRPAEPRRT
Ga0063454_10149289523300004081SoilLIETRTQTHAIISRRPKGLKRFSGGADPGRYVVEVNEDGVVTMHPAEPRRT*
Ga0062593_10227807633300004114SoilSRRPTGLKRFTSGADPGRYVVEVDEDGVASMRRAEPRRS*
Ga0062593_10267306823300004114SoilDQKVEEGYVIETRSDTHAIIFRRPKGLKRFTSGPDPGRYVVQVDEEGIATMSPAEPRRT*
Ga0062594_10081757013300005093SoilGYVIQTRTDTHAIISQRPKGLKRLTSGRDAGRYVVEVDEDGSVTMRPAEPRRT*
Ga0066810_1013028023300005169SoilISRRPKGLKRFRSGADPGRYVVEVDEDGTATMRPAEPRRS*
Ga0066677_1079789923300005171SoilEEGYVIETRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDEDGVATMRAAEPRRT*
Ga0066688_1030849933300005178SoilDQKVEEGYVIETRTDTHAIISQRPKGLKRFTSGRDPGRYVVEVDEDGSVTMRPAEPRRT*
Ga0066684_1029915913300005179SoilAEGFTVETRTDTHAIIFRRPKGLRRFTSGDDPGRFVVEVDEDGRATMREAEPRRS*
Ga0066671_1034829723300005184SoilVIETRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDEDGVATMRAAEPRRT*
Ga0066671_1039779723300005184SoilVFLEQKVQEGYVIETHSDTDAIIFRQPKGLKRFTSGRDPGRYVVQANEDGIATMRPAKPRRT*
Ga0066675_1028933813300005187SoilRSDTHAIIFRRPKGLKRFTSGPDPGRYVVQVDEDGIATMHPAEPRRT*
Ga0070658_1001647943300005327Corn RhizosphereVIETRTDTHAIISRRPTGLKRFTSGADPGRYVVEVDEDGVASMRRAEPRRS*
Ga0070658_1068584313300005327Corn RhizosphereIETRTDTHAIIFRRPKGLRRFTGGDDPGRFVVEVDEDGRATMREAEPRRY*
Ga0070680_10010978613300005336Corn RhizosphereVIETRTDTHAIISQRPKGLKRLTSGRDPGRYVVEVDEDGSATMRPAEPRRH*
Ga0070680_10050104533300005336Corn RhizosphereIETRTETHAILFRRLPLLKRLTSGADPGRYVVEVDEAGVASMRPAEPRRS*
Ga0070661_10006419213300005344Corn RhizosphereEGYVIETRTDTHAIISRRPTGLKRFTSGADPGRYVVEVDEDGVASMRRAEPRRS*
Ga0070705_10143837313300005440Corn, Switchgrass And Miscanthus RhizosphereRTDTHAIISRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT*
Ga0070694_10145693013300005444Corn, Switchgrass And Miscanthus RhizosphereTDTHAIISRRPRGLKRFTSGEDPGRYVVEVDEDGSATMRPAEPRRS*
Ga0070731_1017999843300005538Surface SoilDTHAIIARRPKGLKRFTSGADPGRYVVEVDEDGLAKMQPAEPRRS*
Ga0066700_1106132913300005559SoilRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDEDGVATMRAAEPRRT*
Ga0066693_1035532323300005566SoilFLDQKVEEGYVIETRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDEDGVATMRAAEPRRT*
Ga0066654_1089399423300005587SoilHAIIFRRPKGLKRFTSGPDPGRYVVQVNEDGIATMRPAEPRRT*
Ga0068852_10168392813300005616Corn RhizosphereAEGFTIETRTDTHAILFRRPKGLRRFTSGRDPGRFVVEVDADGRATMRAAEPRRS*
Ga0068852_10249907823300005616Corn RhizosphereGFTIETRTDTHAIIFRRPKGLRQFTSGHDPGRFVVEVDEDGRATMRDAEPRRS*
Ga0066903_10016171073300005764Tropical Forest SoilKVSEGFTIETRTDTHAIIFRRARVMRRFTSGGDPGRFVVEVDQDGRVTTRQAEPRRS*
Ga0075283_100154453300005891Rice Paddy SoilIETRTDTHAIVFRRPKPWRRFTSGPDPGRFVVEVDEDGRATMRAAEPRRT*
Ga0075283_103470513300005891Rice Paddy SoilSRRPKGLKRFTSGPDPGRYVVEVDESGCATMRPAEPRRA*
Ga0075279_1004001713300005903Rice Paddy SoilADTHAIISRRPRGLKRFTSGSDPGRYVVEVDEDGVATMRPAEPRRT*
Ga0070717_1169196213300006028Corn, Switchgrass And Miscanthus RhizosphereIISQRPKGLKRFTGGADPGRFVVEVDEAGSATMRPAEPRRS*
Ga0070716_10000136413300006173Corn, Switchgrass And Miscanthus RhizosphereEGYVIETRTDTHAIISRRPTGLKRFTSGADPGRYVVEVDEDGVATMRPAEPRRT*
Ga0070712_10201247813300006175Corn, Switchgrass And Miscanthus RhizosphereTGTHAIIARRPEGLKRLTSGVDPGRYVVEVDEDGIAKMRPAEPRRA*
Ga0068871_10104060223300006358Miscanthus RhizosphereERIAEGFAVETRTDTHAIVVRRPRGFRRLTGGDDPGRYVVEVDEDGVATMRPAEPRRS*
Ga0079220_1148953813300006806Agricultural SoilAFLDQKVEEGYVIETRTRTHAIISRRPKSFRRFTSGADPGRYVVEVDEDGVATMRPAEPRRT*
Ga0075420_10175784733300006853Populus RhizosphereEEGYAIETRSDTHAIIFRRPKGLKRFTSGPDPGRYVVQVDEDGVATMGPAEPRRT*
Ga0075425_10245209833300006854Populus RhizosphereIETRTDTHAIISRRSKGLSLKRLRSGSDPGRYVVEVDEDGVATMRPAEPRRN*
Ga0079219_1082875213300006954Agricultural SoilVEEGYAIETRTDTHAIISRRPTGLKQFTSGADPGRYVVEVDEDGIAKMRPAEPRRT*
Ga0079219_1210175713300006954Agricultural SoilYTIERRTDTHAIIAKRPRGLRRFTSGPDPGRFVVEVDEDGTASMRPAEPRRS*
Ga0105245_1315539633300009098Miscanthus RhizosphereFVVETRSDTHAIIFRRPKGMRRFARGDDPGRFVVEVDEDGRATMREAEPRRA*
Ga0105241_1056501313300009174Corn RhizosphereKVEEGYVIQTRTDTHAIISQRPKGLKRLTSGRDAGRYVVEVDEDGSVTMRPAEPRRT*
Ga0126307_1162325513300009789Serpentine SoilISQRPTGVRRFTSGSDPGRYVVEVDEDGIATMRPAEPRRS*
Ga0126313_1010038513300009840Serpentine SoilFAIVTRTDTHAIIFRRAKGLRRFTSGEDPGRFVVEVDEDGRATMRQAEPRRS*
Ga0126313_1173874423300009840Serpentine SoilEGYEIEVRTDTHAIIFRRPKGLKRFTSGADPGRYVVEVDENGIATMRPAEPRRT*
Ga0126305_1006550333300010036Serpentine SoilLDQKVEEGYVIETRIDTHAIIFRRPRGLKRFTRGQDPGRYVVQVDEDGIATMRPAEPRRT
Ga0126304_1042050033300010037Serpentine SoilMVSMRSSTRRFAEGYVIETRTDTHAIVARRPRGLKRFTSGRDPGRYVVEVNEKGIATMRPAEPRRT*
Ga0126309_1079629313300010039Serpentine SoilGVRRFTSGADPGRYVVEVDEDGIATMRPAEPRRS*
Ga0126309_1094614323300010039Serpentine SoilEGFTIERRTDTHAIIFRRAKGLRRLTSEDPGRFVVEVDEDGQATMRQAEPRRS*
Ga0126308_1086424813300010040Serpentine SoilRTDTHAIIFRRPKRLRRFRSGDDPGRFVVEVDEDGRATMRPAEPRRS*
Ga0126312_1059988333300010041Serpentine SoilETRTDTHAIIARRPRGLKRFTSGRDPGRYVVEVNEKGIATMRPAEPRRT*
Ga0126312_1109034813300010041Serpentine SoilKVAEGFTIERRTDTHAIIFRRAKGLRRFTSDDPGRFVVEVDEDGRATMRQAEPRRS*
Ga0126314_1011769523300010042Serpentine SoilMFLDHKVEEGYVIETRTDTHAIISRRPKGLKRFTRGADAGRFVVEVDEDGIAAVRPAEPGRR*
Ga0126314_1123585133300010042Serpentine SoilTDTHAIISQRPKGLKRFTSGEDPGRYVVEVDEDGSVTMRPAEPRRT*
Ga0127432_13831613300010067Grasslands SoilDTHAIISQRPKGLKRFTRAGDPGRYVVEVDEDGSATMRPAEPRRR*
Ga0134082_1018856013300010303Grasslands SoilLDQKVEEGYLIETRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDEDGVATMRPAEPRRK
Ga0134084_1006657313300010322Grasslands SoilDTHAIISQRPKGLKRLTSGGDAGRYVVEVDEDGSAAMRPAEPRRA*
Ga0105239_1189367613300010375Corn RhizosphereRKLEEGYEIETRTDTHAIIFRRPKGIKRFTSGADPGRHVVEVDEDGVATMRPAEPRRN*
Ga0137379_1023919723300012209Vadose Zone SoilTRSDTHAIIFRRPKGLKRFTSGRDPGRYVVQVDEDGIATMRPAEPRRT*
Ga0137379_1168461623300012209Vadose Zone SoilFLDEKLAEGFTVETRTDTHAIIFRRPKGLRRFTSGDDPGRFVVEVDEGGHATMRQAEPRRS*
Ga0150985_10011046813300012212Avena Fatua RhizosphereVFLDQKVQEGYAIETRSDTHAIIFRRPKGLKRFTSGPDPGRYVVQVNEDGIATLRPAEPRRT*
Ga0150985_10669388513300012212Avena Fatua RhizosphereKGLKRFTGGADAGRFVVEVDEDGVAAVRPAEPRRR*
Ga0134046_129057433300012386Grasslands SoilYVIETRTDTHAIISQRPKGLKRFTSVGDPGRYVVEVDEDGGATMRPAEPRRT*
Ga0150984_10385477313300012469Avena Fatua RhizosphereTDTHAIISQRPKGLKRFRSGAYSGRYVVEVDEDGSVTMRPAEPRRS*
Ga0150984_11281665713300012469Avena Fatua RhizosphereRRPKGLKRFTSGADPGRYVVEVDEDGIATMRPAEPRRT*
Ga0150984_12369126133300012469Avena Fatua RhizosphereVFLDQKVQDGYAIETRSDTHAIIFRRPKGLKRFTSGPDPGRYVVQVNEDGIATLRPAEPRRT*
Ga0157332_107273013300012511SoilQKVKEGYVIETRTDTHAIISQRPKGLKRFTSGGDPGRYVVEVDEDGSATMRPAEPRRT*
Ga0157288_1019848913300012901SoilGLKRFTSGPDPRRYVVQVNEDGIATMRPAEPQRT*
Ga0164300_1072986413300012951SoilGFTIETRTDTHAIIVRRSKRLRRFTRGDDRGRFVVEVDEDGRATMRDAEPRRS*
Ga0164303_1038646613300012957SoilLDQRVSEGYVIETRTDTHAIVSRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT
Ga0164303_1074099513300012957SoilQKVAEGFVIETRTDTHAIISQRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT*
Ga0164301_1029595053300012960SoilIETRTDTHAIISQRPKGLKRFTGGAGPGRYVVEVDEDGSATMRPAEPRRT*
Ga0134077_1042044533300012972Grasslands SoilAEGYVIETRTDTHAIISQRPKGLKRLTSGADSGRYVVEVDEDGSATMRPAEPRRS*
Ga0134110_1015206333300012975Grasslands SoilYVIETRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDEDGVATMRPAEPRRK*
Ga0134087_1002028933300012977Grasslands SoilVIETHSDTHAIIFRQPKGLKRFTSGRDPGRYVVQANEDGIATMRPAKPRRT*
Ga0157372_1099495433300013307Corn RhizosphereYVIETRTDTHAIISRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT*
Ga0157372_1101850343300013307Corn RhizosphereDQKVAEGFVIETRTDTHAIISQRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT*
Ga0157372_1176409413300013307Corn RhizosphereHAIISQRPKGLKRFTSGADPGRYVVEVDEDGIATMRPAEPRRT*
Ga0120132_103251813300013832PermafrostRPKGLKRFTSGADRGRYVVEVDEGGIATMRPAEPRRS*
Ga0075310_107660613300014302Natural And Restored WetlandsYEVEARTDTHAIIFRRPKGLKRFTSGADPGRYVVEVDEDGIATMRPAEPRRT*
Ga0163163_1266584113300014325Switchgrass RhizosphereFLDKKLEEGYLIETRTGTHAIISRRPKGLKRFTSGADPGRYVVEVDEDGVATMRAAEPRRT*
Ga0134073_1032457813300015356Grasslands SoilIETRTDTHAIIFRRPKGLRRFTSGHDPGRFVVEVDEDGRATMREAEPRRS*
Ga0132258_1011721013300015371Arabidopsis RhizosphereRPKGLKRFTRGEDPGRYVVEVDEDGSVTMRPAEPRRT*
Ga0132258_1192147113300015371Arabidopsis RhizosphereEGYVIESRSDTHAIIFRRPKGFKRLTSGPDPGRYVVQVDEDGIATMRPAEPRRT*
Ga0132256_10042910933300015372Arabidopsis RhizosphereEKLAEGFTIESRSHTHAIIFRRPKGLRRFTSGHDPGRFVVEVDEDGRATMRQAEPRRS*
Ga0132257_10166004413300015373Arabidopsis RhizospherePKGLKRFTGGADHGRYVVQVDEDGIATMRPAEPRRT*
Ga0066655_1070011713300018431Grasslands SoilGQKVEEGYAIETRSDTHAIIFRRAKGLRRFTSGPDPGRFVVEVDEDGVATMRPAEPRRT
Ga0066655_1134579313300018431Grasslands SoilDQKVEEGYVIETRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDEDGVATMRAAEPRRT
Ga0066667_1002999363300018433Grasslands SoilVFLEQKVQEGYVIETHSDTHAIIFRQPKGLKRFTSGRDPGRYVVQANEDGIATMRPAKPRRT
Ga0066669_1018210733300018482Grasslands SoilYVVETRTDTHAIISRRPRGLKRFTSGAAPGRYVVEVDEGGSATMRPAEPRRT
Ga0066669_1094996613300018482Grasslands SoilRPKGLKRFTSGPDPGRYVVQVDEDGIATMHPAEPRRT
Ga0193704_100529663300019867SoilGYVIETRTDTHAIIWLRPKSLRRFTSGADPGRYVVEVDEDGVATMRPAEPRRT
Ga0206356_1007946113300020070Corn, Switchgrass And Miscanthus RhizosphereAEGFTIETRTDTHAIIFRRPKGLRQFTSGHDPGRFVVEVDEDGRATMRDAEPRRS
Ga0193699_1048059823300021363SoilKVEEGYVIETRTDTHAIISRRPKSLRRFTSGADPGRHVVEVDEDGVATMRPAEPRRT
Ga0242661_116564233300022717SoilETRTDTHAIIFRRPKGLRRFTGGADPGRYVVEVDEDGAVTMRPAEPRRT
Ga0247802_106255213300023077SoilFTIETRTDTHAIIFRRPKGLRRFTGGDDPGRFVVEVDEDGRATMREAEPRRY
Ga0247687_100181983300024286SoilRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT
Ga0207705_1077466223300025909Corn RhizosphereETRTDTHAIISRRATGRERLTRVADPGRFVVEVDEDGAATMRPAEPRRS
Ga0207684_1082716333300025910Corn, Switchgrass And Miscanthus RhizosphereTRTDTHAIIFRRPKGLRRFTSGDDPGRFVVEVDEDGHATMRQAEPRRS
Ga0207649_1067418513300025920Corn RhizosphereDTHAIISRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT
Ga0207652_1006425263300025921Corn RhizospherePRGLKRFTSGADPGRYVVEVDEDGIVKMRPAEPRRA
Ga0207652_1104773533300025921Corn RhizosphereRRPTGLKRFTSGADPGRYVVEVDEDGVASMRRAEPRRS
Ga0207664_1015259423300025929Agricultural SoilDQKVAEGYVIETRTDTHAIISQRPTGLKRFTSGADPGRFVVEVDEDGSATMRAAEPRRS
Ga0207704_1121270843300025938Miscanthus RhizosphereGYVIQTRTDAHAIISQRPKGLKRLTSGRDAGRYVVEVDEDGSVTMRPAEPRRT
Ga0207665_1035307843300025939Corn, Switchgrass And Miscanthus RhizosphereTDTHAIISRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT
Ga0207667_1017043513300025949Corn RhizosphereVIETRTATHAIISRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRA
Ga0207702_1063671313300026078Corn RhizosphereAQKVEEGYLIETRTDTHAIISRRPKGLKRFTSGEDPGRYVVEVDEDGRATMRAAEPRRT
Ga0207702_1086586833300026078Corn RhizosphereAFLDQKVREGYVIETRTDTHAIISRRPKGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRT
Ga0208774_102145413300026109Rice Paddy SoilFLDQKVAEGYVIETRTDTHAIVSRRPKGLKRFTSGPDPGRYVVEVDESGCATMRPAEPRR
Ga0207698_1077303813300026142Corn RhizosphereAFLAEKVAEGFTIETRTDTHAILFRRPKGLRRFTSGRDPGRFVVEVDADGRATMRAAEPRRS
Ga0209234_129028933300026295Grasslands SoilGYVVETRTDTHAIISRRPKGFKRFTSGADPGRYVVEVDEDGSATMRPAEPRRR
Ga0209811_1002585113300027821Surface SoilIFRRPKAFKRFTRDLDPGRYVVQVDEDGIATMRPAEPRRT
Ga0209579_1036022123300027869Surface SoilDTHAIIARRPKGLKRFTSGADPGRYVVEVDEDGLAKMQPAEPRRS
Ga0247683_101995523300027991SoilAFLDQKVEEGYVIETRTDTHAIISRRPKGLRRFTSGADPGRYVVEVDEDGVATMRPAEPRRT
Ga0307322_1000058293300028710SoilYVIETRTDTHAIIWLRPKSLRRFTSGADPGRYVVEVDEDGVATMRPAEPRRT
Ga0307293_1005080433300028711SoilVIETRTDTHAIIWLRPKSLRRFTSGADPGRYVVEVDEDGVATMRPAEPRRT
Ga0307293_1012842313300028711SoilAIISQRPKGLKRFTSGEDPGRYVVEVDEDGSVTMRPAEPRRT
Ga0307309_1005243333300028714SoilIETRTDTHAIIWLRPKSLRRFTSGADPGRYVVEVDEDGVATMRPAEPRRT
Ga0307288_1003981813300028778SoilVIETRTDTHAVIAQQPKGLKRFRSGADPGRYVVEVDEDGIATMRPAEPRRT
Ga0307288_1033893813300028778SoilFTVETRSDTHAIIFRRPKGLRRFRSGDDPGRFVVEVDEDGGVTMREAEPRRF
Ga0307310_1018890613300028824SoilYVIETRTGTHAIISKRPRGLKRFTSGADPGRYVVEVDEDGSATMRPAEPRRA
Ga0307312_1037354713300028828SoilQKVEEGYVIETRTDTHAIISRRAKGLKRFTSGADPGRHVVEVDEDGSATMRPAEPRRT
Ga0307277_1042003913300028881SoilVIETRTDTHAIISRRPKRLKRFTSGADPGRYVVEVDDDGVATMRAAEPRRT
Ga0307308_1027655313300028884SoilDQKVEEGYVIETRTDTHAIISRRPKRLRPFTSGADPGRYVVEVDEDGVATMRPAEPRRT
Ga0308192_108662733300031082SoilDEKVDEGYVIETRTDTHAIISQRPKGVRRFTSGADPGRYVVEVDEGGIATMRPAEPRRS
Ga0308193_108142423300031096SoilFLDQKVEEGYVIETRTDTHAIISRRPKSLRRFTSGADPGRYVVEVDEDGVATMRPAEPRR
Ga0307506_1004595913300031366SoilTDTHAIISQRPKGLKRFSRGADPGRYVVEVDEDGSATMRPAEPRRA
Ga0308175_10044894313300031938SoilFLDQKVDEGYAIETRTGTHAVISRRPKALRRLTSGSAPARYVVEVDEDGVATMRPAEPRR
Ga0308174_1027323723300031939SoilAFLDAKLAEGFTIETRTDTHAIIFRRPKGLRQFMSGHDPGRFVVEVDEDGRATMRDAEPRRS
Ga0308176_1150844023300031996SoilTRTDTHAIIARRPKGLKRFTSGADPGRYVVEVDEDGIAKMRPAEPRRA
Ga0307416_10186243433300032002RhizosphereEEGYTIETRTDTHAVIARRPKGLKRFTSGADPGRYVVEVDEDGNATMRPAEPRRA
Ga0308173_1117006433300032074SoilTHAIIAQRPKGLKRFTSGADPGRHVVEVDEDGSVTMRPAEPRRS
Ga0310810_1061223213300033412SoilAFLDRKIAEGYVIETRTDTHAIISRRPTGLKRFTSGADPGRYVVEVDEDGVASMRRAEPRRS
Ga0370544_17952_49_2043300034447SoilMIETRTDTHAIISLRPKSLRRFTSGADPGRYVVEVDEDGVATMRAAEPRRT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.