Metagenome / Metatranscriptome Family F054277

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054277
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	82 residues
Representative Sequence	LRDELLARQQQRVRDALRREHELPPRWRRATQTSSASLELTPTELEALGERFESLLDEFRGRGERRGTRRVVVSFGAAVEP
Number of Associated Samples	110
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.43 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	94.29 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.20% β-sheet: 0.00% Coil/Unstructured: 57.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF07690	MFS_1	54.29
PF05977	MFS_3	24.29
PF00106	adh_short	5.00
PF13347	MFS_2	1.43
PF00230	MIP	1.43
PF13561	adh_short_C2	0.71
PF13442	Cytochrome_CBB3	0.71
PF08447	PAS_3	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	24.29
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.43

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.00 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.00 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	63.57 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.29 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.14 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	9.29 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.29 %
Unclassified	root	N/A	3.57 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.14 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	9.29 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.29 %
Unclassified	root	N/A	3.57 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.14 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	9.29 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.57 %
Unclassified	root	N/A	3.57 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102350523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300001686\|C688J18823_10199897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1348	Open in IMG/M
3300001686\|C688J18823_10551108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300002568\|C688J35102_117734808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300004081\|Ga0063454_101411859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300004463\|Ga0063356_102689218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300004479\|Ga0062595_100422604	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005336\|Ga0070680_101781936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300005337\|Ga0070682_101429950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300005338\|Ga0068868_101611698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300005339\|Ga0070660_101289461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300005344\|Ga0070661_100162347	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300005344\|Ga0070661_101287482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300005345\|Ga0070692_11380050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300005365\|Ga0070688_101641718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300005434\|Ga0070709_10867735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300005455\|Ga0070663_100637393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300005466\|Ga0070685_10711413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300005468\|Ga0070707_100601636	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005526\|Ga0073909_10117004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1075	Open in IMG/M
3300005529\|Ga0070741_10449919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1174	Open in IMG/M
3300005529\|Ga0070741_10660757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300005529\|Ga0070741_10944453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	743	Open in IMG/M
3300005533\|Ga0070734_10057893	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300005533\|Ga0070734_10262222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	990	Open in IMG/M
3300005535\|Ga0070684_100288435	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005535\|Ga0070684_100429751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1219	Open in IMG/M
3300005539\|Ga0068853_100485489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1165	Open in IMG/M
3300005539\|Ga0068853_100897488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300005555\|Ga0066692_10876731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	550	Open in IMG/M
3300005557\|Ga0066704_10989475	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005563\|Ga0068855_102524724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300005578\|Ga0068854_102030818	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005614\|Ga0068856_100432858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1336	Open in IMG/M
3300005614\|Ga0068856_100886780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	911	Open in IMG/M
3300006032\|Ga0066696_10460755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300006173\|Ga0070716_100939954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	680	Open in IMG/M
3300006881\|Ga0068865_101168687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M
3300006904\|Ga0075424_101940592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300006954\|Ga0079219_11421436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	621	Open in IMG/M
3300009137\|Ga0066709_102693916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300009551\|Ga0105238_11310576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300009840\|Ga0126313_10207760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1505	Open in IMG/M
3300010043\|Ga0126380_11059534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300010325\|Ga0134064_10405068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300010376\|Ga0126381_102390511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300010376\|Ga0126381_104997684	Not Available	509	Open in IMG/M
3300012003\|Ga0120163_1130657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	532	Open in IMG/M
3300012019\|Ga0120139_1139838	Not Available	626	Open in IMG/M
3300012200\|Ga0137382_10512744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300012203\|Ga0137399_10219024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1552	Open in IMG/M
3300012685\|Ga0137397_10968167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300012918\|Ga0137396_10957587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300012927\|Ga0137416_11227310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	676	Open in IMG/M
3300012948\|Ga0126375_10864812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300012951\|Ga0164300_10848801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300012955\|Ga0164298_10033963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2321	Open in IMG/M
3300012955\|Ga0164298_10322276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M
3300012955\|Ga0164298_11104041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300012955\|Ga0164298_11143875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300012957\|Ga0164303_10445676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300012958\|Ga0164299_11552520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012961\|Ga0164302_11051706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300012975\|Ga0134110_10592027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012984\|Ga0164309_11291620	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012984\|Ga0164309_11662783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300012985\|Ga0164308_10454192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300012986\|Ga0164304_11460597	Not Available	564	Open in IMG/M
3300012986\|Ga0164304_11727850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300013100\|Ga0157373_10233797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1298	Open in IMG/M
3300013104\|Ga0157370_10187026	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300013104\|Ga0157370_11271287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300013105\|Ga0157369_10094460	All Organisms → cellular organisms → Bacteria	3192	Open in IMG/M
3300013105\|Ga0157369_12697187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300013297\|Ga0157378_10163012	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300013308\|Ga0157375_11539169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300013832\|Ga0120132_1075656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300015241\|Ga0137418_11182462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	539	Open in IMG/M
3300015371\|Ga0132258_13798684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1029	Open in IMG/M
3300015373\|Ga0132257_102357661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300015373\|Ga0132257_103215747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	595	Open in IMG/M
3300015374\|Ga0132255_105808237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300016319\|Ga0182033_10455156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300017947\|Ga0187785_10685941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300020070\|Ga0206356_10692449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300020081\|Ga0206354_10820410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	613	Open in IMG/M
3300020081\|Ga0206354_11705060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300021445\|Ga0182009_10826303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	508	Open in IMG/M
3300022756\|Ga0222622_10755186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300025905\|Ga0207685_10696634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	553	Open in IMG/M
3300025906\|Ga0207699_10719073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300025912\|Ga0207707_10009760	All Organisms → cellular organisms → Bacteria	8328	Open in IMG/M
3300025914\|Ga0207671_10700965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300025915\|Ga0207693_11486002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300025917\|Ga0207660_10532320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300025920\|Ga0207649_10087187	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300025920\|Ga0207649_10475446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300025920\|Ga0207649_11511622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300025922\|Ga0207646_10751609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	870	Open in IMG/M
3300025927\|Ga0207687_10061424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2654	Open in IMG/M
3300025927\|Ga0207687_11897758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300025945\|Ga0207679_11626217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300026023\|Ga0207677_11059034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300026067\|Ga0207678_10202588	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300026067\|Ga0207678_11523909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300026078\|Ga0207702_10826063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300026078\|Ga0207702_11861416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300027826\|Ga0209060_10360542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300027875\|Ga0209283_10433644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300028379\|Ga0268266_10627645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1033	Open in IMG/M
3300028536\|Ga0137415_10937267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	676	Open in IMG/M
3300028709\|Ga0307279_10109127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	523	Open in IMG/M
3300028721\|Ga0307315_10292842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300028784\|Ga0307282_10160220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1068	Open in IMG/M
3300028799\|Ga0307284_10486907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300028824\|Ga0307310_10415862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300030294\|Ga0311349_11443970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300031232\|Ga0302323_101121228	Not Available	877	Open in IMG/M
3300031544\|Ga0318534_10086608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1784	Open in IMG/M
3300031681\|Ga0318572_10156510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1318	Open in IMG/M
3300031716\|Ga0310813_10859799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300031716\|Ga0310813_11556316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300031748\|Ga0318492_10059157	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300031781\|Ga0318547_10196021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1205	Open in IMG/M
3300031782\|Ga0318552_10130071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1258	Open in IMG/M
3300031805\|Ga0318497_10433737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300031820\|Ga0307473_11379127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031938\|Ga0308175_101396861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300031939\|Ga0308174_10926459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300031939\|Ga0308174_11041591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300031939\|Ga0308174_11065476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300031939\|Ga0308174_11418883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300031996\|Ga0308176_10830535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300031996\|Ga0308176_11534438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300031996\|Ga0308176_11851517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300032001\|Ga0306922_11442949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300032893\|Ga0335069_10226027	Not Available	2264	Open in IMG/M
3300032954\|Ga0335083_10301434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300032954\|Ga0335083_11381423	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300033475\|Ga0310811_11283151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.14%
Host-Associated	Host-Associated	27.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	27.86%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.43%
Peat	Environmental → Terrestrial → Peat	1.43%
Sediment	Environmental → Aquatic → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.86%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.29%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.43%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1023505232	3300000955	Soil	ASEGLEATVLRDELVARGQQRVRDALRHEHELPPRWRRAAQTSSATLALTPLELEELGQRFEGLLDDYRGRGERRGTKTIVVSFCAAAEE*
C688J18823_101998971	3300001686	Soil	WRAVAERIEFASDGLEAAVLRDELVARQQQRVRDALRREHELAPRWRRAAQTSSASLALTPSELEELGERFEALLDEYRGRGERRGTKTIVVSFGAAAET*
C688J18823_105511081	3300001686	Soil	VLRDELLGRQQQRVRDALRREHELPPRWRRATQTSSATIELTPSELEQLGERFEQLLEEFRARGERRGARRVVVSFGAAAEPE*
C688J35102_1177348081	3300002568	Soil	DTPAPPDWRRATQTSFATLELTPAELEELGERFEALLDDFRGRGERRSSRGVVVSFQAVAGP*
Ga0063454_1014118591	3300004081	Soil	REHELPPRWRRATQTSSATLELTPSELEELGERFEELLDEFRGRGSRRGTKSIVISFGAAAEA*
Ga0063356_1026892182	3300004463	Arabidopsis Thaliana Rhizosphere	LDANLAPRWRRATQTSFATLELSPTQLEELGERFEALLEEFRERRADRGTRSVVVSFQAVPRA*
Ga0062595_1004226041	3300004479	Soil	QQQRVRDALRREHELPPRWRRATQTSSASLELTPTELEELGERFEELLDEFRGRSDRRGTRRIVVSFGAAVEL*
Ga0070680_1017819362	3300005336	Corn Rhizosphere	DGIEATVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGEQFEALLDSYRGRAERRGTRTVVVSFGAVAEP*
Ga0070682_1014299502	3300005337	Corn Rhizosphere	WRAAAAHIEFSSDGLEATMLRDELVARQQQRVRDGLRREHELPPRWRRATQTSSATLELTALELEELGERFEELLDEFRGRGERRATRRIVISFGAVAEP*
Ga0068868_1016116981	3300005338	Miscanthus Rhizosphere	ERPWRAAASRIEFAADGLEATVLRDELVGRQQQRLREALRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGTRRATKPVVISFGAAAEA*
Ga0070660_1012894612	3300005339	Corn Rhizosphere	PWRATATRIEFDSDGLESSVLRDELVARQQQRIRDALRREHGLAPRWRRAAQTSSASLELTPLELEELGERFEALLDEYRGRDERRGTKRVVVSFGAVAEPDA*
Ga0070661_1001623473	3300005344	Corn Rhizosphere	SDGIEATVLRDELVARQQQRIRDALRREHELPAAWRRAVQTSSATLELTTKELEELGERFEALLDSYRGRDERRGTRTVVVSFGATPEP*
Ga0070661_1012874822	3300005344	Corn Rhizosphere	RDELVARQQQRVRDGLRREHELPARWRRATQTSSATLELTPGELEELGERFEALLEEFRGRDVRRGTRRIVISFGAVADP*
Ga0070692_113800502	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RERPWRAAASRIEFEADGLEATVLRDELVGRQQQRLRDALRREHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0070688_1016417182	3300005365	Switchgrass Rhizosphere	LSPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGTRRATKPVVISFGAAAEA*
Ga0070709_108677352	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TVLRDELVARQQQRVRDALRREHELPAPWRRAVQTSSASLELTTKELEELGERFEALLDSYRGREDRRGTRTVIVSFGATAEP*
Ga0070663_1006373932	3300005455	Corn Rhizosphere	PSDGIEATVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTAKELEELGERFEALLDAYRGREERRGTRTVIVSFGATAEP*
Ga0070685_107114132	3300005466	Switchgrass Rhizosphere	AGRERPWRAAASRIEFEADGLEATVLRDELVGRQQQRLRDALRHEHELSPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGTRRATKPVVISFGAAAEA*
Ga0070707_1006016363	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MALRREHELPPRWRRATQTSSATLELTPSELEELGERFEGLLDEYRGRADRRGTRSIVVSFGAAADA*
Ga0073909_101170042	3300005526	Surface Soil	REALRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0070741_104499191	3300005529	Surface Soil	ALRREHELPAPWRRAVQTSSATLDLTTRELEELGERFEALLDEYRGRSGRRGTRRVVVSFGAAAEP*
Ga0070741_106607572	3300005529	Surface Soil	RPWRPRAATIEFPSDGFEATVLRDEIVARSQQRIRAALAHEHELPARWRRAAQTSSATLELTPGELEELGERFEALLSEFRGRGDRRGTRTVVVSFGATADV*
Ga0070741_109444532	3300005529	Surface Soil	EFPSDGFEATVLRDEIVARHQHRVRSALTHEHELTPRWRRAAQTSSATLELTATELEELGERFERLLDEFRGRGERRGTKTVVLSFGAAAES*
Ga0070734_100578934	3300005533	Surface Soil	IEATVLRDELVGRQQQRVRDALRREHELPPVWRRAVQTSSATLELTPSELEELGSRFEQLLDEFRGRDRRRGTRRVVVSFGAAAEPE*
Ga0070734_102622221	3300005533	Surface Soil	EFPSDGLEATVLRDELVARHQQRVRDALRREHELPPAWRRAVQTSSATLELTTHELEELGERFEALLDEFRGRPGRRGTRRVVVSFGAAAEAR*
Ga0070684_1002884353	3300005535	Corn Rhizosphere	TVLRDELVGRQQQRLRDALRREHELPPRWRRAVQTSAATLELTPGELEELGTRYEALLDEFRGRGERRGTRRVIATFGAAAEA*
Ga0070684_1004297511	3300005535	Corn Rhizosphere	TVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGEQFEALLDSYRGRAERRGTRTVVVSFGAVAEP*
Ga0068853_1004854891	3300005539	Corn Rhizosphere	LEATVLRDELVGRQQQRVRDALRREHELPPRWRRATQTSSATLELTPSELEELGERFEELLDEFRGRNDRRGTRRIVVSFGAAVEL*
Ga0068853_1008974881	3300005539	Corn Rhizosphere	RDALRREHELPAAWRRAVQTSSATLELTTKELEELGERFEALLDSYRGRDERRGTRTVVVSFGATPEP*
Ga0066692_108767311	3300005555	Soil	IESAVLRDELVARQQQRIRDALRHEHELPPRWRRAAQTSSAMLELTPSELEQLGERFEALLDEFRGHGERRGTRHVAVSFGAAAE*
Ga0066704_109894751	3300005557	Soil	RREHELPPRWLRAAQTSSAALTLTPSELDALGDRFEALIDEFRGRGDRRGARAVIVSFGAVAEP*
Ga0068855_1025247242	3300005563	Corn Rhizosphere	RREHELPPRWRRATQTSSATLELTAAELDELGERFEELLEEYRGRSARRGTRRIVISFGAVAEP*
Ga0068854_1020308182	3300005578	Corn Rhizosphere	PPRWRRAVQTSAATLELTPGELEELGTRYEALLDEFRGRGERRGTRRVIATFGAAAEA*
Ga0068856_1004328582	3300005614	Corn Rhizosphere	RIEFPSDGIEATVLRDELVARQQQRVRDALRREHELPAPWRRAVQTSSASLELTTKELEELGERFEALLDSYRGRDERRGTRTVIVSFGATAEP*
Ga0068856_1008867802	3300005614	Corn Rhizosphere	QQQRVRDGLRREHELPPRWRRATQTSSATLELTALELEELGERFEELLDEFRGRGERRATRRIVISFGAVAEP*
Ga0066696_104607551	3300006032	Soil	FDGEGLEATVLRDELVGRQQERLRNALRHEHELPLVWRRATQTSAATLSLTPSELVELGERFETLLDEFRGRGARRGTRDVVVSFGAAAES*
Ga0070716_1009399541	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DALRREHELPPRWRRATQTSSATLELTPSELEELGERFGELLDEFRGRNDRRGTRRIVVSFGAAVEL*
Ga0068865_1011686871	3300006881	Miscanthus Rhizosphere	EALRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKSVVISFGAAAEA*
Ga0075424_1019405921	3300006904	Populus Rhizosphere	ELVARQQQRVRDALRREHELPPSWRRAVQTSSASLELTTKELEDLGERFEALLDEYRGRAERRGTRTVIVSFGATAEP*
Ga0079219_114214362	3300006954	Agricultural Soil	GIEATVLRDELVARQQQRVRDALRREHELPAAWRRAVQTSSASLELTTKELEELGERFEVLLDEYRGRDERRGTRTVIVSFGATAEP*
Ga0066709_1026939162	3300009137	Grasslands Soil	WRATATRIEFSSDGVESVVLRDELVARQQQRFRDALRHEHELPARWRRAAQTSSAMLDLTPSELEQLGARFEALLDEFRGRAARRGTRAVVVSFAAAADPR*
Ga0105238_113105761	3300009551	Corn Rhizosphere	TRIEFDSDGLEATVLRDELVARQQQRLRDALRREHELPPRWRRASQTSSAVLALTPAELDELGERFEALLEEYRGRDAQRGARQVIVSFGAVAEP*
Ga0126313_102077601	3300009840	Serpentine Soil	EGEKGAGRERPWRAAASRIEFEADGLEGTVLRDELVGRQQQRLRDALRHEHELPPRWRRATQTSSATIELTPLELEELGKRFEELLDEFRGRGARRGTKKVVISFGAGAEA*
Ga0126380_110595341	3300010043	Tropical Forest Soil	REHEVPPRWRRASQTSSSTLELTPIELEQFGERFEALVEEFRNRADRKGTRRVVVSFGAVVEP*
Ga0134064_104050682	3300010325	Grasslands Soil	RDELVGRQQERLRNALRHEHELPLVWRRATQTSAATLSLTPSELVELGERFETLLDEFRGRGARRGTRDVVVSFGAAAES*
Ga0126381_1023905113	3300010376	Tropical Forest Soil	GLEATVLRDELVGRQQQRVRDALRREHELPPRWRRAAQTSSAALTLTPSELDELGERFEALIDDFRGRDRRRGCRSVVVSFSAVAEP*
Ga0126381_1049976842	3300010376	Tropical Forest Soil	IEFDSDGLEATVLRDELVGRQQQRVRDALRREHELPTRWRRAAQTSSAALSLTSKELEELGERFEALLDDFRGRGRRRGTRSVVVSLGAVAEP*
Ga0120163_11306571	3300012003	Permafrost	WRASAARIEFEADGLEATVLRDELVGRQQQRLRNALRREHELPPRWRRAAQTSSATVLLTAAELQEFGARFEELLDEFRGGGPRRGTRQVVVSFGAVTEP*
Ga0120139_11398381	3300012019	Permafrost	LEATVLRDELVGRQQQRLRNALRREHELPRRWRRAAQTSSATVLLTAAELQEFGARFEELLDEFRGGGPRRGTRQVVVSFGAVTEP*
Ga0137382_105127441	3300012200	Vadose Zone Soil	LVARQQQRVRDALRREHELPSAWRRAVQTSAATLELTTAELEELGERFEKLLDEFRGRGDRRGTRRIVVSFAAAAEPR*
Ga0137399_102190243	3300012203	Vadose Zone Soil	RREHELPPRWRRATQTSSASLELTPTELEALGERFEALLDEFRGRGERRGTRRVVVSFGAAVEP*
Ga0137397_109681672	3300012685	Vadose Zone Soil	ESTVLRDELLARQQQRVRDALRREHELAPRWRRATQTSSATLELTPTELETLGERFEQLLDEFRGRGERRGTRRVVISFGAAAEA*
Ga0137396_109575872	3300012918	Vadose Zone Soil	AVLRDELLARQQQRVRDALRREHELPPRWRRATQTSSASLELTPTELEALGERFEALLDEFRGRGERRGTRRVVVSFGAAVEP*
Ga0137416_112273101	3300012927	Vadose Zone Soil	LRDELLARQQQRVRDALRREHELPPRWRRATQTSSASLELTPTELEALGERFESLLDEFRGRGERRGTRRVVVSFGAAVEP*
Ga0126375_108648122	3300012948	Tropical Forest Soil	RIEFDSDGVESVVLRDEILARQQQRVRDALRREHEVPPRWRRATQTSSATLELTPTELETLGERFEQLLDEFRGHGDRRGTRQVVVSFGAAAEPR*
Ga0164300_108488011	3300012951	Soil	QQRVRDALRREHELPAAWRRAVQTSAATLELTTAELEELGERFEALLDEFRGRAPRRRTRTVVVSFGAAAEP*
Ga0164298_100339634	3300012955	Soil	GRQQQRLRNALRREHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0164298_103222761	3300012955	Soil	VLRDELVGRQQQRLRDALRREHELPPRWRRATQTSSATLELTPLELEELGERFESLLDEFRGRERKGTRRVIVSFGAAVEP*
Ga0164298_111040411	3300012955	Soil	LPPRWRRATQTSSATLALTPSELEELGERFEELLEEFRGRTDRRGTRHIVVSFGAAVEL*
Ga0164298_111438752	3300012955	Soil	DALRREHELPASWRRAVQTSSASLELTTKELEELGERFEALLDSYRGRAERRGTRTVVVSFGAVAEP*
Ga0164303_104456762	3300012957	Soil	REHELPPRWRRATQTSSATLELTPSELEELGERFEELLDEFRGRNDRRGTRRIVVSFGAAVEL*
Ga0164299_115525202	3300012958	Soil	RLRDALRREHALPPRWRRATQTASATPELTPLELEELGERFESLLDEFRGRERKGTRRVIVSFGAAVEP*
Ga0164302_110517062	3300012961	Soil	ELVGRQQQRLREALRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0134110_105920272	3300012975	Grasslands Soil	EHELPKRWRRAIQTSSAALTLTPDELDELGERFEGLLEELRGRTGRRGARQVIVSFAAVAEP*
Ga0164309_112916201	3300012984	Soil	ELVGRQQQRVRDALRREHELPPRWRRAAQTSSAALTLTPSELDALGDRFEVLIDEFRGRGDRRGARAVIVSFGAVADP*
Ga0164309_116627832	3300012984	Soil	REHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0164308_104541921	3300012985	Soil	LRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0164304_114605971	3300012986	Soil	LLARQQQRVRDALRHEHELAPRWRRATQTSSATLELTPTELEQLGERFERLLDEFRGRGERRGTRRVVISFGAAAEPE*
Ga0164304_117278501	3300012986	Soil	IEFASDGLEAIVLRDELVARRQQRLRDALRHEHELPPRWRRAAQTSSATLQLTPLELEELGERFEALLDDFRGRDRRGAERDDDRACAAAES*
Ga0157373_102337971	3300013100	Corn Rhizosphere	RREHELPAAWRRAVQTSSASLDLTTKELEELGERFEALLDSYRGREERRGTRTVIVSFGATAEPPA*
Ga0157370_101870261	3300013104	Corn Rhizosphere	QQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGEQFEALLDSYRGRAERRGTRTVVVSFGAVAEP*
Ga0157370_112712871	3300013104	Corn Rhizosphere	RATATRIEFPSDGIEATVLRDELVARQQQRIRDALRREHELPAAWRRAVQTSSATLELTTKELEELGERFEALLDSYRGRDERRGTRTVVVSFGATPEP*
Ga0157369_100944601	3300013105	Corn Rhizosphere	VRDALRREHELPASWRRAVQTSSASLELTTKELEELGERFEVLLDSYRGRAERRGTRTVVVSFGAVAEP*
Ga0157369_126971871	3300013105	Corn Rhizosphere	IEATVLRDELVARQQQRVRDALRREHELPTSWRRAVQTSSASLELTTKELEELGERFEALLDAYRGREERRGTRTVIVSFGATAEP*
Ga0157378_101630123	3300013297	Miscanthus Rhizosphere	ALRREHELPAAWRRAVQTSAATLELTTAELEELGERFEALLDEFRGRAPRRRTRTVVVSFGAAAEP*
Ga0157375_115391692	3300013308	Miscanthus Rhizosphere	GRERPWRAAASRIEFEADGLEATVLRDELVGRQQQRLRNALRREHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGTRRATKPVVISFGAAAEA*
Ga0120132_10756561	3300013832	Permafrost	EATVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSATLELTTKELEELGERFETLLDEYRGREERRGTRTVIVSFGAVAEP*
Ga0137418_111824622	3300015241	Vadose Zone Soil	VLRDELVGRQQQRLRDALRLEHELPPRWRRAAQTSSATLVLTAAELEELGARFEELLDEFRGGGTRRGTRQVVISFGAVTEP*
Ga0132258_137986842	3300015371	Arabidopsis Rhizosphere	VLRDELVGRQQQRLRDALRREHELAPRWRRATQTSSATFELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0132257_1023576612	3300015373	Arabidopsis Rhizosphere	AASRIEFAGEGLEATVLRDELVGRQQQRLRDALRREHELAPRWRRATQTSSATFELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA*
Ga0132257_1032157471	3300015373	Arabidopsis Rhizosphere	ALAQSASLPARWRSAAQTSAATLELTAAELEELGERFEALLDELRARGKRRGTKRVVISFAAAAQPEGE*
Ga0132255_1058082372	3300015374	Arabidopsis Rhizosphere	VGRQQQRLRDALRHEHELAPRWRRATQTSSASIELTPLELEELGERFERLLDEYRGRGARRGTKPIVISFGAAAEA*
Ga0182033_104551561	3300016319	Soil	LARQQQRLRTALSAEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0187785_106859412	3300017947	Tropical Peatland	ELVARQQQRVRDALRREHELPPVWRRAVQTSSATLELTPSELEELGSRFEQLLDEFRGRDKRRGTRRVVVSFCAAAEPE
Ga0206356_106924491	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	EATVLRDELVARQQQRVRDALRREHELPATWRRAVQTSSATLELTTKELEELGERFEALLDSYRGRDERRGTRTVVVSFGATPEP
Ga0206354_108204102	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	RPWQPSADRIEFASDGFEATVLRDELVGRQQQRLRDALRREHELPPRWRRAVQTSAATLELTPGELEELGTRYEALLDEFRGRGERRGTRRVIATFGAAAEA
Ga0206354_117050602	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	RPWRATATRIEFPSDGIEATVLRDELVARQQQRVRDALRREHELPAAWRRAVQTSSATLELTTKELEELGERFEALLDSYRGRDERRGTRTVVVSFGATPEP
Ga0182009_108263031	3300021445	Soil	EGKKGAGRERPWRAAASRIEFEADGLEATVLRDELVGRQQQRLRDALRHEHELSPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGTRRAAKPVVISFGAAAEA
Ga0222622_107551861	3300022756	Groundwater Sediment	ADGLEATVLRDELVGRQQQRLREALRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA
Ga0207685_106966342	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VLRDELVARQQQRVRDALRREHELPAAWRRAVQTSAATLELTTAELEELGERFEALLDEFRGRAPRRRTRTVVVSFGAAAEP
Ga0207699_107190732	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ATRIEFDSDGLEATVLRDELVGRQQQRIRDALRREHELPPRWRRAAQTSSAALTLGPAELEELGERFEALIDEFRGSEDRRGARSVIVSFGAVAEP
Ga0207707_100097601	3300025912	Corn Rhizosphere	RDALRREHELPMSWRRAVQTSSASLELTTKELEELGERFEALLDAYRGREERRGTRTVIVSFGATAEP
Ga0207671_107009652	3300025914	Corn Rhizosphere	WRATAARIEFPSDGIEATVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGEQFEALLDSYRGRAERRGTRTVVVSFGAVAEP
Ga0207693_114860022	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IEFAADGLEATVLRDELVGRQQQRLREALRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA
Ga0207660_105323202	3300025917	Corn Rhizosphere	PSDGLEATVLRDELVGRQQQRVRDALRREHELPPRWRRATQTSSATLELTPSELEELGERFEELLDEFRGRNDRRGTRRIVVSFGAAVEL
Ga0207649_100871873	3300025920	Corn Rhizosphere	HIEFSSDGLEATMLRDELVARQQQRVRDGLRREHELPPRWRRATQTSSATLELTALELEELGERFEELLDEFRGRGERRATRRIVISFGAVAEP
Ga0207649_104754462	3300025920	Corn Rhizosphere	ELVGRQQQRVRDALRREHELPTSWRRAVQTSSASLELTTKELEELGERFEALLDSYRGRGERRGTRTVIVSFGATAEP
Ga0207649_115116221	3300025920	Corn Rhizosphere	FSSDGLEAATLRDELVARQQQRVRDGLRREHELPARWRRATQTSSATLELTPGELEELGERFEALLEEFRGRDVRRGTRRIVISFGAVAEP
Ga0207646_107516091	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AARIEFEADGLEATVLRDELVGRQQERLRMALRREHELPPRWRRATQTSSATLELTPSELEELGERFEGLLDEYRGRADRRGTRSIVVSFGAAADA
Ga0207687_100614246	3300025927	Miscanthus Rhizosphere	NLAPRWRRATQTSFATLELSPTQLEELGERFEALIEEFRERRADRGTRSVVVSFQAVPRA
Ga0207687_118977581	3300025927	Miscanthus Rhizosphere	QQQRIRDALRREHELPPRWRRAAQTSSAALTLGPAELEELGERFEALIDEFRGREDRRGARSVIVSFGAVAEP
Ga0207679_116262172	3300025945	Corn Rhizosphere	LVARQQQRIRDALRREHELAPRWRRAAQTSSASLELTPLELEELGERFEALLDEYRGRDERRGTRGVVVSFGAVAEP
Ga0207677_110590342	3300026023	Miscanthus Rhizosphere	VRDALRREHELPPRWRRATQTSSATLELTPSELEELGERFEELLDEFRGRNDRRGTRRIVVSFGAAVEL
Ga0207678_102025883	3300026067	Corn Rhizosphere	ARIEFPSDGIEATVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTAKELEELGERFEALLDAYRGREERRGTRTVIVSFGATAEP
Ga0207678_115239091	3300026067	Corn Rhizosphere	ARIEFPSDGIEATVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGEQFEALLDSYRGRAERRGTRTVVVSFGAVAEP
Ga0207702_108260632	3300026078	Corn Rhizosphere	RDELLARQQQRVRDALRHEHELAPRWRRATQTSSATLELTALELEELGERFEELLDEFRGRGERRATRRIVITFGAVAEP
Ga0207702_118614162	3300026078	Corn Rhizosphere	ALRREHELPAAWRRAVQTSSASLELTTKELEELGERFEALLDEFRGRPRRRGRRRVVVSFGAVAEP
Ga0209060_103605422	3300027826	Surface Soil	GIEATVLRDELVGRQQQRVRDALRREHELPPVWRRAVQTSSATLELTPSELEELGSRFEQLLDEFRGRDRRRGTRRVVVSFGAAAEPE
Ga0209283_104336442	3300027875	Vadose Zone Soil	HELPARWRRAAQTSAATLLLTAAELEELGARFEELLDEFRGGGIRRGTRQVVISFGAVTE
Ga0268266_106276452	3300028379	Switchgrass Rhizosphere	GLEATVLRDELVARQQQRLRDALRREHELPPRWRRASQTSSAVLALTPAELDELGERFEALLEEYRGRDAQRGARQVIVSFGAVAEP
Ga0137415_109372672	3300028536	Vadose Zone Soil	LRDELLARQQQRVRDALRREHELPPRWRRATQTSSASLELTPTELEALGERFESLLDEFRGRGERRGTRRVVVSFGAAVEP
Ga0307279_101091271	3300028709	Soil	VGRELPWRATAARIEFASDGLEATVLRDELVARQQQRLRDALRHEHELPPRWRRAAQTSSATLELTPAELEELGERFERLLDEFRGRDRRGARTIVVAFGAAAES
Ga0307315_102928422	3300028721	Soil	FAADGLEATVLRDELVGRQQQRLREALRHEHELAPRWRRATQTSSATIELTPLELEELGERFEQLLDEFRGRGARRGTKPIVISFGAAAEA
Ga0307282_101602201	3300028784	Soil	VRDALRREHELPPRWRRATQTSSATLELTPSELEELGERFEVLLDEFRGRSDRRGTRRIVVSFGAAVEL
Ga0307284_104869071	3300028799	Soil	RQQQRVRDALRREHELPPRWRRATQTSSATLELTPSELEELGERFEELLDEFRGRNDRRGTRRIVVSFGAAVEL
Ga0307310_104158622	3300028824	Soil	RIVFPSVGIEATVLRDELVARQQQRVRDALRREHELPSSWRRAVQTSSATLELTTKELEELGERFEALLDEYRSREGRRGTRTVIVSFGATAEP
Ga0311349_114439702	3300030294	Fen	IRDALRNEHELPARWRRAAQTSSAQLELTPSELKELGERFEALLDEFRGRGERRGTRQIVVSFGAAAEL
Ga0302323_1011212282	3300031232	Fen	TVLRDELVGRQQQRIRDALRHEHELPARWRRAAQTSSAMLELTPSELEELGERFEALLDEFRGREERRGTRHVVVSFGAAAE
Ga0318534_100866082	3300031544	Soil	VLRDEILARQQQRLRTALSAEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0318572_101565101	3300031681	Soil	PSDGLEATVLRDEILARQQQRLRTALSAEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0310813_108597992	3300031716	Soil	LEATVLRDELVGRQQQRVRDALRREHELPPRWRRATQTSSATLELTPSELEELGERFEELLDEFRGRNDRRGTRRIVVSFGAAVEL
Ga0310813_115563161	3300031716	Soil	LVARQQQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGERFEALLDSYRGRDERRGTRTVIVSFGETAEP
Ga0318492_100591571	3300031748	Soil	IEFPSDGLEATVLRDEILARQQQRLRTALSAEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0318547_101960211	3300031781	Soil	ATVLRDEILARQQQRLRTALSAEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0318552_101300712	3300031782	Soil	PWQARATRIEFPSDGLEATVLRDEILARQQQRLRTALSAEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0318497_104337372	3300031805	Soil	DGLEATVLRDEILARQQQRLRTALSAEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0307473_113791271	3300031820	Hardwood Forest Soil	VRDALRREHELPPRWRRATQTSSATIELTPSELEELGERFELLLDEFRGRGERRGTRQTVISFGAAAEPR
Ga0308175_1013968611	3300031938	Soil	RPWRATAARIEFPSDGIEATVLRDELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGEQFEALLDSYRGRAERRGTRTVVVSFGAVAEP
Ga0308174_109264591	3300031939	Soil	RVRDALRREHGLPPRWRRAAQTSSASLELTPLELEELGERFEELLDQFRGRGERRGSRQAVISFAAVAE
Ga0308174_110415912	3300031939	Soil	REHELPPRFRRAAQTSSATLELTAAELDELGERFEELLDEFRGRCGRRGSRPVVLSFAAVAEPE
Ga0308174_110654762	3300031939	Soil	ATVLRDELVARQQQRVRDALRREHELPSPWRRAVQTSSASLELTTKELEELGERFEALLDEYRGRDVRRGTRTVIVSFGATAEP
Ga0308174_114188832	3300031939	Soil	RERPWRATATRIEFPSDGLEATVLRDELVARQQQRVRDALRREHELQPRLRRAAQTSAATLELTVAELDDLGERFEALLDEFRGRDRRRGAHRVVVSFGAVFEP
Ga0308176_108305352	3300031996	Soil	DALRREHELPAAWRRAVQTSSASLELTTKELEELGERFEALLDDYRGRDERRGRRTVIVSFGAVAEP
Ga0308176_115344381	3300031996	Soil	VARQQQRVRNGLRREHELPARWRRATQTSSATLELTATELEELGERFEELLEEFRGRGVRRGTRSIVVSFGAVAEP
Ga0308176_118515171	3300031996	Soil	ELVARQQQRVRDALRREHELPASWRRAVQTSSASLELTTKELEELGEQFEALLDSYRGRAERRGTRTVVVSFGAVAEP
Ga0306922_114429491	3300032001	Soil	AEHELPPRWRRAAQTSASALELTPTELEELGERFEQLLTEYRGRGERRGTRRVVVSFGAAAEA
Ga0335069_102260273	3300032893	Soil	ERPWRATAARIEFTSDGPEATVLRDELLGRQQQRLRDALRREHELPAVWRRAVQTSSATLALTPSELEELGRRFEALLDDFRGREPRRATRQVVVSFGATAEP
Ga0335083_103014342	3300032954	Soil	LVARQQQRVRDALRREHELPAAWRRAVQTSSAALELTPAELEELGRRFEDLLDEFRGHGQRRGTHRVVVSFGAAAEPT
Ga0335083_113814232	3300032954	Soil	REHELPSRWRRAAQTSAATLELTAAELDELGGRFEELLDELRARPHRRGTRRVVVSFGAVAEP
Ga0310811_112831511	3300033475	Soil	SDGIEATVLRDELVARQQQRVRDALRREHELPAPWRRAVQTSSASLELTTKELEELGERFEALLDSYRGRDERRGTRTVIVSFGATAEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences