Metagenome / Metatranscriptome Family F054233

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054233
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	105 residues
Representative Sequence	MAAANASARGQRAAILASPLHELTGFYLAVDCLAPRCNGERTFAVAELATFYGRDSTVGQVLRRMRCSGACGGRVGAAWLVTGPILSVRVRPRRVALLGPEARE
Number of Associated Samples	100
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.39 %
% of genes near scaffold ends (potentially truncated)	47.14 %
% of genes from short scaffolds (< 2000 bps)	92.14 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.286 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.000 % of family members)
Environment Ontology (ENVO)	Unclassified (22.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 18.94% Coil/Unstructured: 53.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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SCOP family	SCOP domain	Representative PDB	TM-score
b.1.9.3: CBD9-like	d1ug9a3	1ug9	0.53
b.1.9.3: CBD9-like	d1ug9a3	1ug9	0.53
c.37.1.9: P-loop containing nucleoside triphosphate hydrolases	d1ry6a_	1ry6	0.52
c.37.1.0: P-loop containing nucleoside triphosphate hydrolases	d2nr8a_	2nr8	0.52
c.37.1.9: P-loop containing nucleoside triphosphate hydrolases	d1ry6a_	1ry6	0.52
c.37.1.0: P-loop containing nucleoside triphosphate hydrolases	d2nr8a_	2nr8	0.52
b.1.18.9: E set domains	d1rlla1	1rll	0.51
c.37.1.0: P-loop containing nucleoside triphosphate hydrolases	d2vvga_	2vvg	0.51
b.1.18.9: E set domains	d1rlla1	1rll	0.51
c.37.1.0: P-loop containing nucleoside triphosphate hydrolases	d2vvga_	2vvg	0.51

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF02586	SRAP	5.00
PF04120	Iron_permease	1.43
PF01042	Ribonuc_L-PSP	1.43
PF00346	Complex1_49kDa	0.71
PF04545	Sigma70_r4	0.71
PF07690	MFS_1	0.71
PF07883	Cupin_2	0.71
PF02735	Ku	0.71
PF04909	Amidohydro_2	0.71
PF01479	S4	0.71
PF08448	PAS_4	0.71
PF14559	TPR_19	0.71
PF09722	Xre_MbcA_ParS_C	0.71
PF02371	Transposase_20	0.71
PF02615	Ldh_2	0.71
PF13412	HTH_24	0.71
PF13474	SnoaL_3	0.71
PF03364	Polyketide_cyc	0.71
PF13458	Peripla_BP_6	0.71
PF00072	Response_reg	0.71
PF00550	PP-binding	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	5.00
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.43
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.71
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.71
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.71
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
All Organisms	root	All Organisms	30.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
cellular organisms	root	All Organisms → cellular organisms	30.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	7.86 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	4.29 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	4.29 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	2.86 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.71 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.71 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	4.29 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	2.86 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.71 %
Xanthomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	0.71 %
unclassified Acidiphilium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.29 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	4.29 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	2.14 %
Acidiphilium sp. JA12-A1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. JA12-A1	0.71 %
Acidisphaera sp. L21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	0.71 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.71 %
Xanthomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10022515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2061	Open in IMG/M
3300004152\|Ga0062386_101027845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	683	Open in IMG/M
3300004152\|Ga0062386_101723278	Not Available	523	Open in IMG/M
3300005336\|Ga0070680_100146237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1983	Open in IMG/M
3300005434\|Ga0070709_10679883	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005435\|Ga0070714_100496171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1164	Open in IMG/M
3300005435\|Ga0070714_100746056	Not Available	946	Open in IMG/M
3300005435\|Ga0070714_101357860	Not Available	694	Open in IMG/M
3300005436\|Ga0070713_100073261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2899	Open in IMG/M
3300005436\|Ga0070713_102295507	Not Available	522	Open in IMG/M
3300005439\|Ga0070711_101125720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300005456\|Ga0070678_100082185	Not Available	2445	Open in IMG/M
3300005530\|Ga0070679_100271276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1650	Open in IMG/M
3300005535\|Ga0070684_101739686	Not Available	588	Open in IMG/M
3300005537\|Ga0070730_10489291	Not Available	790	Open in IMG/M
3300005538\|Ga0070731_10977591	Not Available	560	Open in IMG/M
3300005541\|Ga0070733_10060641	Not Available	2376	Open in IMG/M
3300005548\|Ga0070665_100614253	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300005614\|Ga0068856_101804441	Not Available	623	Open in IMG/M
3300005764\|Ga0066903_106918145	Not Available	589	Open in IMG/M
3300005842\|Ga0068858_101416985	Not Available	685	Open in IMG/M
3300005843\|Ga0068860_102197335	Not Available	573	Open in IMG/M
3300006028\|Ga0070717_10623235	Not Available	979	Open in IMG/M
3300006175\|Ga0070712_100193235	Not Available	1594	Open in IMG/M
3300006175\|Ga0070712_101237072	Not Available	650	Open in IMG/M
3300006175\|Ga0070712_101527070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300006755\|Ga0079222_10817189	Not Available	764	Open in IMG/M
3300006854\|Ga0075425_102319092	Not Available	596	Open in IMG/M
3300006893\|Ga0073928_10904245	Not Available	605	Open in IMG/M
3300006893\|Ga0073928_10992757	Not Available	572	Open in IMG/M
3300006953\|Ga0074063_12848732	Not Available	583	Open in IMG/M
3300006954\|Ga0079219_12480691	Not Available	504	Open in IMG/M
3300009098\|Ga0105245_10568223	Not Available	1157	Open in IMG/M
3300009098\|Ga0105245_12044699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	626	Open in IMG/M
3300009148\|Ga0105243_10718874	Not Available	976	Open in IMG/M
3300009176\|Ga0105242_12125916	Not Available	605	Open in IMG/M
3300009177\|Ga0105248_12798029	Not Available	556	Open in IMG/M
3300009545\|Ga0105237_11502522	Not Available	680	Open in IMG/M
3300009551\|Ga0105238_12163692	Not Available	591	Open in IMG/M
3300009553\|Ga0105249_10841012	Not Available	983	Open in IMG/M
3300010048\|Ga0126373_10516805	Not Available	1238	Open in IMG/M
3300010361\|Ga0126378_10881264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	1002	Open in IMG/M
3300010361\|Ga0126378_12217354	Not Available	627	Open in IMG/M
3300010361\|Ga0126378_12466541	Not Available	594	Open in IMG/M
3300010361\|Ga0126378_12649316	Not Available	573	Open in IMG/M
3300010361\|Ga0126378_12664383	Not Available	571	Open in IMG/M
3300010375\|Ga0105239_11316997	Not Available	833	Open in IMG/M
3300010376\|Ga0126381_100298387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	2205	Open in IMG/M
3300010376\|Ga0126381_100424561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1858	Open in IMG/M
3300010376\|Ga0126381_100643233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	1512	Open in IMG/M
3300010376\|Ga0126381_103737135	Not Available	595	Open in IMG/M
3300010376\|Ga0126381_104405927	Not Available	544	Open in IMG/M
3300010376\|Ga0126381_104898309	Not Available	514	Open in IMG/M
3300010379\|Ga0136449_101997902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300010379\|Ga0136449_103365575	Not Available	613	Open in IMG/M
3300010396\|Ga0134126_10673753	Not Available	1178	Open in IMG/M
3300012212\|Ga0150985_109839217	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300012469\|Ga0150984_101263167	Not Available	632	Open in IMG/M
3300012469\|Ga0150984_115690215	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300012469\|Ga0150984_115966479	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300012957\|Ga0164303_11432889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300012960\|Ga0164301_11075911	Not Available	638	Open in IMG/M
3300012971\|Ga0126369_12534824	Not Available	598	Open in IMG/M
3300012984\|Ga0164309_10670187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300012986\|Ga0164304_10245552	Not Available	1197	Open in IMG/M
3300012986\|Ga0164304_11370884	Not Available	579	Open in IMG/M
3300012988\|Ga0164306_10571633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300012988\|Ga0164306_11659623	Not Available	553	Open in IMG/M
3300013306\|Ga0163162_12319716	Not Available	617	Open in IMG/M
3300013307\|Ga0157372_12651933	Not Available	575	Open in IMG/M
3300013308\|Ga0157375_12292011	Not Available	644	Open in IMG/M
3300013831\|Ga0120126_1046387	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300014325\|Ga0163163_10190384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2100	Open in IMG/M
3300014497\|Ga0182008_10407644	Not Available	731	Open in IMG/M
3300014657\|Ga0181522_10511714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. JA12-A1	724	Open in IMG/M
3300014968\|Ga0157379_12305246	Not Available	536	Open in IMG/M
3300014968\|Ga0157379_12613509	Not Available	506	Open in IMG/M
3300015206\|Ga0167644_1050468	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300015371\|Ga0132258_12642818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1253	Open in IMG/M
3300015371\|Ga0132258_13116820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1146	Open in IMG/M
3300016294\|Ga0182041_10707138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	894	Open in IMG/M
3300016371\|Ga0182034_11636791	Not Available	566	Open in IMG/M
3300016387\|Ga0182040_11157791	Not Available	649	Open in IMG/M
3300016422\|Ga0182039_11868197	Not Available	551	Open in IMG/M
3300018469\|Ga0190270_12122441	Not Available	621	Open in IMG/M
3300018476\|Ga0190274_10472602	Not Available	1244	Open in IMG/M
3300018481\|Ga0190271_11552745	Not Available	778	Open in IMG/M
3300020579\|Ga0210407_10640829	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300020582\|Ga0210395_10189817	Not Available	1540	Open in IMG/M
3300020583\|Ga0210401_10848977	Not Available	772	Open in IMG/M
3300020583\|Ga0210401_10855476	Not Available	769	Open in IMG/M
3300021170\|Ga0210400_10651434	Not Available	867	Open in IMG/M
3300021171\|Ga0210405_10704954	Not Available	780	Open in IMG/M
3300021178\|Ga0210408_10925056	Not Available	678	Open in IMG/M
3300021401\|Ga0210393_10220846	Not Available	1535	Open in IMG/M
3300021401\|Ga0210393_11271955	Not Available	591	Open in IMG/M
3300021401\|Ga0210393_11353621	Not Available	570	Open in IMG/M
3300021403\|Ga0210397_10186934	Not Available	1473	Open in IMG/M
3300021403\|Ga0210397_10779943	Not Available	737	Open in IMG/M
3300021403\|Ga0210397_11129813	Not Available	609	Open in IMG/M
3300021403\|Ga0210397_11541896	Not Available	516	Open in IMG/M
3300021404\|Ga0210389_10936954	Not Available	673	Open in IMG/M
3300021404\|Ga0210389_11435670	Not Available	526	Open in IMG/M
3300021406\|Ga0210386_10909445	Not Available	753	Open in IMG/M
3300021475\|Ga0210392_10163028	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300021475\|Ga0210392_10877357	Not Available	671	Open in IMG/M
3300021478\|Ga0210402_10872563	Not Available	826	Open in IMG/M
3300021559\|Ga0210409_11079502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	678	Open in IMG/M
3300021560\|Ga0126371_11143399	Not Available	917	Open in IMG/M
3300021560\|Ga0126371_13227730	Not Available	551	Open in IMG/M
3300021861\|Ga0213853_10067487	Not Available	675	Open in IMG/M
3300024271\|Ga0224564_1102957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	581	Open in IMG/M
3300025915\|Ga0207693_10052680	All Organisms → cellular organisms → Bacteria	3192	Open in IMG/M
3300025915\|Ga0207693_10205435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1549	Open in IMG/M
3300025915\|Ga0207693_10575059	Not Available	878	Open in IMG/M
3300025915\|Ga0207693_11411626	Not Available	516	Open in IMG/M
3300025916\|Ga0207663_10649393	Not Available	832	Open in IMG/M
3300025916\|Ga0207663_11259033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300025916\|Ga0207663_11385666	Not Available	566	Open in IMG/M
3300025921\|Ga0207652_10855576	Not Available	805	Open in IMG/M
3300025927\|Ga0207687_11258840	Not Available	636	Open in IMG/M
3300025929\|Ga0207664_11100434	Not Available	710	Open in IMG/M
3300026121\|Ga0207683_10074362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	3006	Open in IMG/M
3300027824\|Ga0209040_10001100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	21089	Open in IMG/M
3300027857\|Ga0209166_10462018	Not Available	655	Open in IMG/M
3300027908\|Ga0209006_10182978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1827	Open in IMG/M
3300027911\|Ga0209698_10943497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	645	Open in IMG/M
3300027915\|Ga0209069_11005441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	512	Open in IMG/M
3300028710\|Ga0307322_10154778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300028768\|Ga0307280_10316063	Not Available	572	Open in IMG/M
3300028778\|Ga0307288_10216192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	742	Open in IMG/M
3300031708\|Ga0310686_112356416	Not Available	850	Open in IMG/M
3300031715\|Ga0307476_11418463	Not Available	505	Open in IMG/M
3300031890\|Ga0306925_11483063	Not Available	665	Open in IMG/M
3300031939\|Ga0308174_10688083	Not Available	853	Open in IMG/M
3300032074\|Ga0308173_12163789	Not Available	525	Open in IMG/M
3300032174\|Ga0307470_10351620	Not Available	1022	Open in IMG/M
3300032782\|Ga0335082_11607331	Not Available	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.57%
Host-Associated	Host-Associated	21.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	21.43%
Aquatic	Environmental → Aquatic	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.43%
Freshwater	Environmental → Aquatic → Freshwater	4.29%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.43%
Sediment	Environmental → Aquatic → Sediment	1.43%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.14%
Loam	Environmental → Terrestrial → Soil → Loam	18.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.14%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.43%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.14%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.14%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.43%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_100225153	3300003219	Bog Forest Soil	VAAANASARGQRAALLASPLHELTGFYLAVDCLAPRCSGERSFAVAELASFYGRDSTVGQVLRRMRCSGTCGGRVGAAWLVTGPILNARVRPRRVPVLGPEARE*
Ga0062386_1010278452	3300004152	Bog Forest Soil	LSSRVPYRPGMAAANASARGQRSAILASPLHELTGFCLAMDCLDPQCRRDRIFAISDLADFYGRQRTVAEVLQRMRCSEGCGGRVAAAWLVTGPILNARVRPRRVPLLGPEARE*
Ga0062386_1017232781	3300004152	Bog Forest Soil	MAAASASARGQRAAILASPLSELTGFNLAVDCLTPRCGDERTFAVADLANFYGRDRTVGDVLRRMRCSGACSGRVGAAWLVTGPVWNAQVRSRRVALWGPEARD*
Ga0070680_1001462373	3300005336	Corn Rhizosphere	MSNGFRMGGWRKSLDPVPCSLYVPSMAAANASPRAQRSAILQSPLRELTGFYLAVDCLAPGCGGERRFAVAELADFYRGRTVGDVLRLMRCSGGCGGRAEAAWLETGPILNARVRPRRVALRGPEARG*
Ga0070709_106798831	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GTARVGIIHSRPHSGAPRPLAASSIIMAAANASPRGQRAAILASPLHQLTGFYLAADCRSVGCGGERTFAIAELAGFYKDRTVGEVLRLMRCSRGCGGRVLAAWLETGPVLNQRIRPRRVPLLGPEARE*
Ga0070714_1004961712	3300005435	Agricultural Soil	VAILGSPLHELSGFYVAVDCLTPRCRGERCFAIAELATFYGRDRTVGQVLRRMRCSGGCGGRVGAARLETGPIRNARVRPRRVPLLGPEARE*
Ga0070714_1007460563	3300005435	Agricultural Soil	SAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG*
Ga0070714_1013578601	3300005435	Agricultural Soil	MAAANASPRGQRAAILASPLHELTGFHLTVDCCSAGCRGERSFAIAELAGFYKDRTVGDVLRLMRCSRGCGGRALAAWLETGPVLNQRIRPRR
Ga0070713_1000732614	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAAANASPRGQRAAILASPLHELTGFHLTVDCCSAGCRGERSFAIAELAGFYKDRTVGDVLRLMRCSRGCGGRALAAWLETGPVLNQRIRPRRMPLLGPEARE*
Ga0070713_1020431051	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LLVDRTDRGSLRFSDDEHVGRMGTRARGRQAPVGLACLSCSFYVPGMAANASARGQRAAILASPLHELTGFYLAVDCLTSGCGRERTFAVAELASFYGAQRTVGEVLRRMRCSGGCGGRVAAAWLVTGPILNRRVRPRRVPLLGPEARE*
Ga0070713_1022955071	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG*
Ga0070711_1011257201	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PVVAGKHPPPGLVEPSCSSYVLSMAAANASARGQRAAILASPLHELTGFYLAVDCLASGCGRERTFAIAELASFYGAQRMVGEVLRRMRCSNGCGDRVGAAWLVTGPILGTRVRPRRVPLLGPEARE*
Ga0070678_1000821854	3300005456	Miscanthus Rhizosphere	LDTRCCSFYVLYMAAANASARGQRSAIMSSSLRKFSGFYLTVDCRSAGCHGERQFAIAELESFYENRTVEQVLRAMRCKTGCGGRVLATWLETGPILNARVRPRRVPLLGPDVRG*
Ga0070679_1002712762	3300005530	Corn Rhizosphere	MSNGFRMGGWRKSLDPVRCSLYVPSMAAANASPRAQRSAILQSPLRELTGFYLAVDCLAPGCGGERRFAVAELADFYRGRTVGDVLRLMRCSGGCGGRAEAAWLETGPILNARVRPRRVALRGPEARG*
Ga0070684_1017396862	3300005535	Corn Rhizosphere	GQRVAIMASPLHELTGFYLAVDCRSADCRGERKFAIAELAAFYKAATVSDVLRRMRCTRGCGGRVLAAWLETGPILSARGRARRVPLLGPEVRG*
Ga0070730_104892912	3300005537	Surface Soil	MFAYMAAANASARGQRVAILASPLGELTGFSLVVNCGRPGCGGERTYTVAALAACYGAGMTVGEALCRMRCGRGCGGRGAVAWLATGAVLNQRIRPRRVPLLGPEARE*
Ga0070731_109775912	3300005538	Surface Soil	GLLCSLYVPCMAAANASARGQRVAILGSPLRELTGFYLSVDCMTAGCGGERTYAVAELASFYGQDQTVGSVLRRMRCGTGCGGRAMAAWLATGPILNRRVRPRRVPLLGPEARE*
Ga0070733_100606417	3300005541	Surface Soil	GRTNRLDPPTRSLYVPLMPAANASPRGQRHAILASPLAELTGFALTVDCLGRGCAGERTYSVTALAACYGASMTVGDVLRLMRCARGCGGRPVVAWLVTGPVLNKRVRPRRVALLGAEARE*
Ga0070665_1006142533	3300005548	Switchgrass Rhizosphere	RRSCSLYVLFSMAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGHVLQRMRCLGCGGRVGAAWLVTSPVLGARVRARRVALRGPEARE*
Ga0068856_1018044411	3300005614	Corn Rhizosphere	MAAANASARGQRAAIMASPLHQLTGFYLSVDCRSAGCRGERTFAIAELAGFYKDRTVGEVLRQMRCSNGCGGRVLAAWLETGPALNTRVRPRRVPLLGPEARG*
Ga0066903_1069181452	3300005764	Tropical Forest Soil	VAAANASARGQPTALLASPLSELTGFFLAVDCQSKGCGGERTFAVSQLAVFYKGQTVGEVLRRMRCSGGCGGRVGAAWLVTGPISGIKVRARRVALRGPEARA*
Ga0068858_1014169851	3300005842	Switchgrass Rhizosphere	MAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGRVLQRMRCLGCGGRVGAAWLVTGPVLGARIRARRVPLRGPGARE*
Ga0068860_1021973351	3300005843	Switchgrass Rhizosphere	MAAANASARGQRAAILASPLHELTGFDLAVDCRALRCTGERTFAVAELASCHGRDSTVGQVLRRMRCSGGCGGRVGAAWLVTGAILGTRVRPRRVPLLGPEARE*
Ga0070717_106232351	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MFPLCSVMAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG*
Ga0070712_1001932351	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAAANASARGQRAAILASPLHQLTGFYLAADCRSVGCGGERTFAIAELAGFYKDRTVGEVLRLMRCSRGCGGRVLAAWLETGPVLNQRIRPRRVPLLGPEARE*
Ga0070712_1012370721	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPVVAGKHLPPGLVEPSCSSYVLSMAAANASARGQRAAILASPLHELTGFYLAVDCLASGCGRGRTFAVAELASFYGAQRTVGEVLRRMRCSNGCGGRVGAAWLVTGPILGTRVRPRRVPLLGPEARE*
Ga0070712_1015270701	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HELTGFYLAVDCLASGSARTFAVAELASFYGAQRTMGEVLRLTAVLWRLWRPGGAAWLVTGPILGTRVRPRRVPLLGPEARE*
Ga0079222_108171892	3300006755	Agricultural Soil	QRMPRLVGNGRRSCSALHQLTGFYLAVDCGSAVCGGERSFAITELAAFYMDRAVGDVLRLMRCSRGCGGRALSAWLETGPLLKQRTRARRVPLLGPEVHE*
Ga0075425_1023190922	3300006854	Populus Rhizosphere	MASPLHQLTGFYLTVDCRSLGCGGERTFAISDLAGFYKDRTVGEVLRLMRCSRGCGGRVMAAWLETGPVLNTRVRPRRVPLLGP
Ga0073928_109042452	3300006893	Iron-Sulfur Acid Spring	VAAANASARGQRAAILASPLHELTGFLLAVDCLARGCNGERSFAVAELASFYGQNRTVGQVLLRMRCTGACGGRVGGAWLVTGPILNTALDH
Ga0073928_109927571	3300006893	Iron-Sulfur Acid Spring	MAAANASARGQRAAILASPLYELTGFYLAVDCLTPDCARERTFAVAELASFYGAQRTIGEVLRRMRCSGGCGGRVGAAWLVTGPILSTRVRPRRVPLLGPEARE*
Ga0074063_128487321	3300006953	Soil	AVVSGSPFLARPPSELTGFNLTVDCLSPGCARERTFAVADLATFYGGQRTVGDVLRRMRCSGACGGRVGAAWLVTGPVLNARVRPRRVALLGPDARE*
Ga0079219_124806911	3300006954	Agricultural Soil	MPRLVGNGRRSCSALHQLTGFYLAVDCGSADCGGERSFAITELAAFYKDRSVGDVLRLMRCSRGCGGRVLSAWLETGPLLNQRTRARRVPLLGPEVH
Ga0105245_105682232	3300009098	Miscanthus Rhizosphere	MAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGRVLQRMRCLGCGGRVGAAWLVTGPVLGARVRARRVALRGPEARE*
Ga0105245_120446991	3300009098	Miscanthus Rhizosphere	MAAANASARGQRAAILASPLLELTGFCLAVDCLNPECRRDRMFAVTELAEFYGRKRTVSEILRRMRCSDGCGGRVAAAWLVTGPILNTRPVRPRRVALLGQEARHSL*
Ga0105243_107188742	3300009148	Miscanthus Rhizosphere	MAAANASARGQRAAILASPLRQLTGFYLAVDCRTAGCGGERSFAIAELAGFYKDRTAGEVLRLMRCSRGCGGRVLAAWLETGPVLSQRVRPRRVPLLGPEARE*
Ga0105242_121259162	3300009176	Miscanthus Rhizosphere	MAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGRVLQRMRCLGCGGRVGAAWLVTGPVLGARVRARRVA
Ga0105248_127980291	3300009177	Switchgrass Rhizosphere	LDRRSCSLYVLFSMAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGRVLQRMRCLGCGGRVGAAWLVTGPVLGARVRARRVALRGPEARE*
Ga0105237_115025221	3300009545	Corn Rhizosphere	MAAANASARGLPRAILESPLREMDGFRLAVDCRSAGCRGERAYLIAELARAFGADVTVGEVLRRMRCTHGCGGRVLVASIETGPAINARARPRR
Ga0105238_121636921	3300009551	Corn Rhizosphere	MAAANASPRAQRSAILQSPLRELTGFYLAVDCLAPGCGGERRFAVAELADFYRGRTVGDVLRLMRCSGGCGGRAEAAWLETGPILNARVRPRRVALRGPEARG*
Ga0105249_108410122	3300009553	Switchgrass Rhizosphere	MAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGRVLQRMRCLGCSGRVGAAWLVTGPVLGARVRARRVALRGPEARE*
Ga0126373_105168051	3300010048	Tropical Forest Soil	MAAANASARGQRAAILSSALRELTGLYLAVDCLAAGCNGVRTFAIAELAGFYGRDSTVGQVLRRMRCSGACGGRVGVAWLETGQIPNARARPRCVPLLGPEVRE*
Ga0126378_108812643	3300010361	Tropical Forest Soil	MAAASASARGQRVAILSSPLRELGGFRLAVDCRSAGCRGERTYLIAELAASFGTNTTVSEVLRRMRCAHGCGGGVQAAWLETGPVLNARIRPRRMPLLGPEARE*
Ga0126378_122173541	3300010361	Tropical Forest Soil	VLQMAAANASTRGQRVAILASPLRELTGFLLAVDCLAPGCNGERTFAIAELASFYGQDCTVGQVLRRMRCSGTCGGRVGAAWLETGPILNARVRPRRVPLLGPEARE*
Ga0126378_124665411	3300010361	Tropical Forest Soil	MAAANASARGQRAAILASPLHELTGFYLAVDCLAPRCNGERSFAVTDLATFYGRDTTVGQVLRRMRCSGACGGRVGAAWLITGPILNARVRPRRVPLWGPEARE*
Ga0126378_126493161	3300010361	Tropical Forest Soil	MAAANASARGQRAAILASPLRELTGFYLAVDCLAPRCNGERSFAVAELASFYGRDSKVGQVLRRMRCSGACGGRVGAEWLVTGPILNARVRPRRVPLQGPEAR
Ga0126378_126643831	3300010361	Tropical Forest Soil	MAAANASARGQRAAILESRLTEFTGYYVAVDCQSGGGGGERIFAVSDLENFYKGQTVGRALQRMRCLGCGSRVSAAWLVTGPVLGARVRPRRVPLRGPEARE*
Ga0105239_113169971	3300010375	Corn Rhizosphere	MASPLHQLTDFYLAVDCRSADCRGERKFAIAELAAFYKAATVSDVLRRMRCTRGCGGRVLAAWLETGPILSARGRARRVPLLGPEVRG*
Ga0126381_1002983873	3300010376	Tropical Forest Soil	VQCARGQRAAILNSPPHELTGFYLAVDCLAPGCNGERTFAITELASFCGRDCTVGELLRRMRCYRACGGRGTAWLETGPILNARVRPRRVPLLGPEARE*
Ga0126381_1004245611	3300010376	Tropical Forest Soil	RGQRAAILSSPLRELTGLYLAVDCLAASCNGERTFAIAELAGFYGRDSTVGQVLRRMRCSGACGGRVGVAWLETGQIPNARVRARRVPLLGPEVRE*
Ga0126381_1006432333	3300010376	Tropical Forest Soil	MIMAAANASARGQRVAILESRLTEFTGYYIALDCESGGCGGERTFAVSDLENFYKGQTVGRVLQRMRCLGCGCRVAAAWLVTGPVLGARVRARRVPLRGPEARE*
Ga0126381_1037371351	3300010376	Tropical Forest Soil	PMAAANASARGQRAAILASPLHELTGSYLAVDCLAPRCSGERSFAVTDLATFYGRDTTVGQVLRRMRCSGACGGRVGAAWLITGPILNARVRPRRVPLWGPEVRE*
Ga0126381_1044059271	3300010376	Tropical Forest Soil	MAAANASARGQRVAILSSPLRERMGLYLAVDCLAAGCSGERTFAIAELAGFYGWDRTVGQVLRQMRCSGAWAAGAAWLETGVRARRVPLLGPEVREGRGRLRVRCPSSAMSGRAAAAA
Ga0126381_1048983091	3300010376	Tropical Forest Soil	MATANASARGQRAAILSSPLHEFSGFLLAVDCFGPECGGARSFAIADLANFYGQDRTVGQVLRRMRCSGACGGQVAAAWLETGPMLNA
Ga0136449_1019979021	3300010379	Peatlands Soil	MAAANASARGQRAAILASRLHELTGFYLSVDCLAAGCRGERSFDVADLASLYGRDSRVGQVLRRMRCSNGCGDRVGAAWMVTGPILNARVRPRR
Ga0136449_1033655751	3300010379	Peatlands Soil	MQTIRLKYVLSIMAAANASARGQRAAILASPLLELTGFNLTVDCLSPGCARERTFAVADLASFYGGSQPVGEVLRRMRCSGACGGRVGAAWLVTGPVLNARVRPRRVALWGPEARE*
Ga0134126_106737533	3300010396	Terrestrial Soil	MAAANASARGQRAAILASKLRDMTGFHLVVDCRGPGCGRERTFAISELADFYRRETTVSEVLRRMRCSRGCGGPVAAAWLTTGPILNARVRPRRVALL
Ga0150985_1098392172	3300012212	Avena Fatua Rhizosphere	CSLYVLVMAAANASPRGQRVAILASPLHELTGFCLAVDCLNLECRRDRMFAVTELAEFCGCQRTVAEVLRRMRCSDGCAGRVAAAWLVTGPILNARVRPRRVPLLGPEARE*
Ga0150984_1012631671	3300012469	Avena Fatua Rhizosphere	SPLKELTGFCLVVDCLAPGCGGERTFAVAELASFYGSDRAVGDVLRRMRCSGGCGGRVGAAWLATGPVLNQRVRPRRVPLIGPEARE*
Ga0150984_1156902152	3300012469	Avena Fatua Rhizosphere	MAAANASARGQRAAILASLLSELTGFNLTVDCLCPGCARQRMFTVADLASFYGGSRTVGEVLRRMRCSGACGGRVGAAWLVTGPVLNARVRPRRVALLGPEARE
Ga0150984_1159664791	3300012469	Avena Fatua Rhizosphere	MAAANASPRGQRVAILASPLHELTGFCLAVDCLNLECRRDRMFAVTELAEFCGCQRTVAEVLRRMRCSDGCAGRVAAAWLVTGPILNARVRPRRVPLLGPEARE*
Ga0164303_114328892	3300012957	Soil	ARGQRAAIMASPLHALTCFYLPAHCLTSDCARERTFAVAVLASFYGTQRTVGEVLRRMRCAGGCGGRVGAAWLVTGPVLNRRVRPRRVPLLGPAARE*
Ga0164301_110759112	3300012960	Soil	MAANASARGQRAAILASPLHELTGFYLAVDCLTSDCARERTFAVAELASFYGPQRTVGEVLRRMRCAGGCGGRVGAAWLVTGPILNRRVRPRRVPLLGPAARE*
Ga0126369_125348242	3300012971	Tropical Forest Soil	MAAANASARGQRVAILSSPLRELMGLYLAVDCLAAGCNGVRTFAIAELAGFYGRDSTVGQVLRRMRYSGACGGRAGAAWLETGQIPNARVRARRVPLLGSEVRE*
Ga0164309_106701871	3300012984	Soil	MAANASARGQRAAILASPLHELTGFYLAVDCLTSDCARERTFAVAELASFYGTQRTVGEVLRRMRCAGGCGGRVGAAWLVTGPILNRRVRPRRVPLLGHEARE*
Ga0164304_102455522	3300012986	Soil	MAANASARGQRAAILASPLHELTGFYLAVDCLTSDCARERTFAVAELASFYGTQRTVGEVLRRMRCAGGCGGRVGAAWLVTGPILNRRVRPRRVPLLGPAARE*
Ga0164304_113708841	3300012986	Soil	MAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGHVLQRMRCLGCGGRVGAAWLVTSPVLGARVRARRVALRGPEARE*
Ga0164306_105716332	3300012988	Soil	RAAILASPLHELTGFYPAVDCLTSDCARERTFAVAELASFYGTQRTVGEVLRRMRCAGGCGGRVGAAWLVTGPILNRRVRPRRVPLLGPAARE*
Ga0164306_113223191	3300012988	Soil	GVNAGEGQQAPVGLACLSCSLYVLGMAANASARGQRAAILASPLHELTGFYLAVDCLTSDCARERTFAVAELASFYGTQRTVGEVLRRMRCAGGCGGRVGAAWLVTGPILNRRIRPRRVPLLGPAARE*
Ga0164306_116596231	3300012988	Soil	MAANASAHGQRAAILASPLHELTGFYLAVDCLTSDCARERTFAVAELASFYGPQRTMGEVLRRMRCAGGCGGRVGAAWLVTGPILNRRVRPRRVPLLGPAARE
Ga0163162_123197162	3300013306	Switchgrass Rhizosphere	MAAANASARGQRAAILASPLRQLTGFYLAVDCRTAGCGGERSFAIAELAGFYKDRTAGEVLRLMRCSRGCGGRVLAAWLETGPVLSQRVRPRRVPLLGPEAR
Ga0157372_126519331	3300013307	Corn Rhizosphere	MAAANASARGQRAAILTSPLRQLTGFYLAVDCRTAGCGGERSFAIAELAGFYKDRRWGEVLRLMRCSRGCGGRVLAAWLETGPVLSQRVRPRRVPLLGPAARK*
Ga0157375_122920111	3300013308	Miscanthus Rhizosphere	MAAANASARGQRAAILASPLHELTVFYLAVVASDCGRERTFAVAELASFYGGQRTVGEVLRRMRCGAGGCGGRVGAAWLKTGPILNRCVRPRRVPL
Ga0120126_10463871	3300013831	Permafrost	MAAANASARGQRAAILASPLSELTGFNLTVDCLSPGCARERTFAVADLATFYGGGRTVGDVLRRMRCSGACGGRVAAAWLVTGPVLNARVRPRRGVLLGPEARE*
Ga0163163_101903844	3300014325	Switchgrass Rhizosphere	VAANASARGQRAAILASPLRQLTGFYLAVDCRSTSCGGERSFAIAELAAFYKDRAVGEVLRLMRCSRGCGGRVVAAWLETGPVLNQRVRPRRVPLLGPESRE*
Ga0182008_104076442	3300014497	Rhizosphere	MAAANASARGQRAAILASPLHQLTGFHLTVDCCSAGCRGERAFAIAELAGFYKDRTVGEVLRLMRCSRGCGGRALAAWLETGPVLNQRV
Ga0181522_105117144	3300014657	Bog	MAAANASARGQRSAILASPLHELIGFYLAVDCMSPGCRGERTFAVAELAAFYKAERTVGDVLRMMRCSGGCRGRVAAAWLETGPILNARVRPRRVALLGPEA
Ga0157379_123052462	3300014968	Switchgrass Rhizosphere	LHQLTGFYLAVDCRSTSCGGERSFAIAELAAFYKDRTVGEVLRLMRCSRGCGGRVLAAWLETGPVLNQRVRPRRVPLLGQEVRNTP*
Ga0157379_126135091	3300014968	Switchgrass Rhizosphere	MAAANASARGQRAAILESRLTEFSGYYVAVDCQSGGCGGERTFAVSDLENFYRGQTLGRVLQRMRCSGCGGRVGAAWLVTGPVLCSAPGSGRAGCPC
Ga0167644_10504683	3300015206	Glacier Forefield Soil	MAAAHASARGQRSAILASPLHELTGFCLEVDCLNPDCRRDRVYAVSELASFYGRDRNVGEVLQRMRCSSECGGRVAAAWLVAGPVLNKRVRSRRVALLGSEASE*
Ga0132258_126428181	3300015371	Arabidopsis Rhizosphere	MAAANASPRGQRVAILGSPLHELSGFYVAVDCLTPRCRGERCFAIAELATFYGRDRTVGQVLRRMRCSGGCGGRVGAARLETGPIRNARVRPRRVPLLGPEARE*
Ga0132258_131168202	3300015371	Arabidopsis Rhizosphere	MAANASARGQRAAILSAPLTEFRGFCLAVDCLTDGCRGERSYVVAALAACYSGRWTVGEVLRRMRCGGCGGRVSAAWLVTGEELNSRVRPRRVPLWGPEAKE*
Ga0182041_107071381	3300016294	Soil	MMAAANASARGQRVAILASPLHELTGFYLAVDCLAVECRGERTFAIADLASFYGWDRTVGQVLRRMRCSRACGGLVGATWSETGPILSTRVRPRRVPLLGPEARE
Ga0182034_116367911	3300016371	Soil	NPAPSRRLDQSRCSLYVRNMAAANASARGQRAAILASPLRELTGFYLAVDCLAPRCNGERSFAVAELASFYGRDSKVGQVLRRMRCSGACGGRVGAEWLVTGPILNARVRPRRVPLLGPEARE
Ga0182040_111577911	3300016387	Soil	MAAANASARGQRVAILASPLHELTGFLLAVDCLAPRCDGERTFAIVELASFYGRDCTVGQVLRRMRCSGTCGGRVGAAWLGTGPILNTRVRPRRVPLLGPEARE
Ga0182039_118681971	3300016422	Soil	MPAAARGQRAAILASPLHELTGFYLTVDCLAAECRGERTFAIAELASFYGWDRTVGQVLRRMRCSRACGGRVGAAWLETGPILSTRVRPRRVPLLGPEAHE
Ga0190270_121224411	3300018469	Soil	MAAANASARGQRVALLASPLRELTGFYLAVDCRSADCRGERKFAVAELAAFYKAATVGDVLRRMRCTRGCGGRVLAAWLETGPIVNARVRPRRVPLLGPEARE
Ga0190274_104726022	3300018476	Soil	MAAANASARGQRVAIMASPLHELTGFYLAVDCRSADCRGERKFAIAELAAFYKAATVSDVLRRMRCTRGCGGRVLAAWLETGPILSARGRARRVPLLGPEVRG
Ga0190271_115527452	3300018481	Soil	MPPRTAGRHHGQPLHELTGFYLAVDCRSADCRGERKFAIAELAAFYKTATVGDVLRRMRCTGACGGRVLAAWLETGPIVSARVRARRVPLLGPEARG
Ga0210407_106408292	3300020579	Soil	MAAANASARGQRAAILASPLHELTGFYLAVDCLAPRCNGERTFAVAELATFYGRDSTVGQVLRRMRCSGACGGRVWAAWLVTGPILSV
Ga0210395_101898172	3300020582	Soil	MNLVFPLRSPMAAANASARGQRAAILASPLSELSGFCLVVDCLTAGCGGERTFAASDLAGFYGVGRAVGDVLRRMRCSGGCGGRVGAAWLVTGPVLNTRVRPRRVPLLGADAME
Ga0210401_108489772	3300020583	Soil	RAVASTAMFPLCSIMAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0210401_108554761	3300020583	Soil	MAAANASARGQRSAILASPLHELTGFCLEVDCLADGCRRDQTFAVSELASFYGKHRTVGDVLRRMCCADGCGGRVAAAWLATGPVLNRRVRPRRVPLLGPDARG
Ga0210400_106514341	3300021170	Soil	MAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0210405_107049541	3300021171	Soil	YVPPLAAANASARGQRAAILASPLHELTGFYLAVDCLAPRCNGERTFAVAELATFYGRDSTVGQVLRRMRCSGACGGRVGAAWLVTGPILSVRVRPRRVALLGPEARE
Ga0210408_109250561	3300021178	Soil	MFPLCSVMAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0210393_102208461	3300021401	Soil	MAAANASARGQRAAILASPLHELTGFYLAVDCLAPRCNGERTFAVAELATFYGRDSTVGQVLRRMRCSGACGGRVGAAWLVTGPILSVRVRPRRVALLGPEARE
Ga0210393_112719552	3300021401	Soil	MTAANASARGERSAILASRLHELTEFCLAVDCLARVCGGERSFAVSQLASFYGRDRTVGDVLRRMRCSGAWGGRVWAAWLVTGPMLNMRLRPR
Ga0210393_113536211	3300021401	Soil	LRLRLFDGRDRGRDRAVASTAMFPLCSVMAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0210397_101869344	3300021403	Soil	MNLVFPLRSPMAAANASARGQRAAILASPLSELSGFCLVVDCLTAGCGGERTFAASDLAGFYGVGRAVGDVLRRMRCSGGCGGRVGAAWLVTGPVLSTRVRPRRVPLLGAQARE
Ga0210397_107799432	3300021403	Soil	PLHELAGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0210397_111298132	3300021403	Soil	MRPDAGLELPGSRRRARFDGVLCSLYVPEMAAANASARGQRAAILSSPLHELTGFYLAVDCLAPRCAGERSFAATDLATFYGRDTTVGQVLRRMRCSGACGGRVGAAWLVTGPILNARVRPRRVPRWG
Ga0210397_115418962	3300021403	Soil	KLDGLLCSLYVPCMAAANASARGQRVAILGSPLRELTGFYLSVDCMTAGCGGERTYAVAELASFYGQDQTVGSVLRRMRCGTGCDGRVMAAWLATGPILNRRVRPRRVPLLGPDARE
Ga0210389_109369542	3300021404	Soil	MAAANASARGQRTAILSSPLHQLTGFCLAVDCLTLGCRGERAFAIGDLAKFYGRYRTVADVLQRMRCSGDCGGRVAAAWLTTGPSLNARVRPRRVPLRGPEARGF
Ga0210389_114356702	3300021404	Soil	VPCMAAANASARGQRVAILGSPLRELTGFYLSVDCMTAGCGGERTYAVAELASFYGQDRTVGSVLRRMRCGTGCGGRAMAAWLATGPILNRRVRPRRVPLLGPDARE
Ga0210386_109094452	3300021406	Soil	MAAANASARGQRVAILASPRKELIGFCLTVDCGAPGCGGARSFAIAELASFYSPDSTVSEVLQRMRCSGGCGGRVGAAWLETGAILNARVRPRRVALRGPEARE
Ga0210392_101630281	3300021475	Soil	RDRAVASIAMFPLCSVMAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0210392_108773572	3300021475	Soil	MAAANASPRAQRSAILASPLHELTGFCLEVDCLAEGCRRDWMFAVSELASCCYGRDPTVGEVLRRMRCSGGCGGRVVAGSLVTGPVMNMRVRPRRVALLGPEVRG
Ga0210402_108725631	3300021478	Soil	GQLMQRAAIVASPLHELTGFYLAVDCLAPRCNGERTFAVAELATFYGRDSTVGQVLRRMRCSGACGGRVGAAWLVTGPILSARVRPRRVALLGPEARE
Ga0210409_110795021	3300021559	Soil	MAAANASARGQRAAILASPLHELTGFYLAVDCLASGCNGERTFAIAELASFYGREATVGQALRRMRCSRACGGRVGAAWLETGPILNARVRPRRVPLLGPEARE
Ga0126371_111433991	3300021560	Tropical Forest Soil	MAAANASARGQRAAILASPLHELTGFLLAVDCLALGCDGERTFAIVELASFYGRDCTVGQVLRRMRCSGTCGGRVEAAWLETGPILNARVRPRRVPLLGPEARE
Ga0126371_132277301	3300021560	Tropical Forest Soil	MAILGSPLHELTGFYLAVDCLTAGCGGERTFAVAELASFYGEDQTVGAVLRRMRCRAGCGGRVMAAWLGTGPILNRRVRPRRVPLLGPEAGE
Ga0213853_100674871	3300021861	Watersheds	TGVAATHGRDIYQAGKHLRPGFDCRLDRSTRSLYVLRMAAANASARGQRANILASPLHELTGFLLAVDCLAPGCNGERRFAVAELASFYGRDSTVGEVLRRMRCSGACGGRVEAAWLETGPILNARVRPRRVPLRGPEALE
Ga0224564_11029571	3300024271	Soil	MAAANASARRRRSAILASPLDELTGFCLAVDCLAPDCGGERTYAVASLAGFYGQDMTVGDVLRRMRCSGACGGRVGAAWLVTGPVLNARVRPRCVPLRGPDVRES
Ga0207693_100526801	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RFDWIRCSLYVLSRAAAYAPTRGQRLAILASPLFELTGFCLVVDCLTRGCSGERAFAITDLATFYGDTTTVGEVVRRMRCSNGCGRRVGAAWLVTGPRLNTRARPRRVALWGPEARE
Ga0207693_102054353	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPVVAGKHLPPGLVEPSCSSYVLSMAAANASARGQRAAILASPLHELTGFYLAVDCLASGCGRGRTFAVAELASFYGAQRTVGEVLRRVRCSNGCGGRVGAAWLVTGPILGTRVRPRRVPLLGPEARE
Ga0207693_105750591	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAAANASPRGQRVAILGSPLHELSGFYVAVDCLTPRCRGERCFAIAELATFYGRDRTVGQVLRRMRCSGGCGGRVGAARLETGPIRNARVRPRRVPLLGPEARE
Ga0207693_114116261	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VLIMAAANASARGQRAAILASPLHELTGFYLAVDCLTSDCARERTFAVAELAYGSQRTVGEVLRRMRCAGGCGGRVGAAWLVTGPILNRRVRPRRVPLLGPVARE
Ga0207663_106493933	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAAANASARGQRAAILASPLHQLTGFYLAADCRSAGCGGERTFAIAELASFYKDRTVGEVLRLMRCSRGCGRRVLAAWLETGPVLNQRV
Ga0207663_112590332	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPVVAGKHPPPGLVEPSCSSYVLSMAAANASARGQRAAILASPLHELTGFYLAVDCLASGCGRERTFAIAELASFYGAQRMVGEVLRRMRCSNGCGDRVGAAWLVTGPILGTRVRPRRVPLLGPEARE
Ga0207663_113856661	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAAANASARGQRAAILASPLHQLTGFYLTVDSRSATCLGERSFAIAELASFYKDRTVGEVLRLMRCSRGCGGRVLAAWLETGPVLNQRVRPRRCRCWGRGK
Ga0207652_108555762	3300025921	Corn Rhizosphere	LYVPCMAAANASPRAQRSAILQSPLRELTGFYLAVDCLAPGCGGERRFAVAELADFYRGRTVGDVLRLMRCSGGCGGRAEAAWLETGPILNARVRPRRVALRGPEARG
Ga0207687_112588402	3300025927	Miscanthus Rhizosphere	MAAANASARGQRVAILASRLTEFSGYYVAVDCQSEGCGGERTFAVSDLENFYRGQTVGRVLQRMRCLGCGGRVGAAWLVTGPVLGARVRARRVALRGPEARE
Ga0207664_111004342	3300025929	Agricultural Soil	QRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0207683_100743625	3300026121	Miscanthus Rhizosphere	LDTRCCSFYVLYMAAANASARGQRSAIMSSSLRKFSGFYLTVDCRSAGCHGERQFAIAELESFYENRTVEQVLRAMRCKTGCGGRVLATWLETGPILNARVRPRRVPLLGPDVRG
Ga0209040_1000110026	3300027824	Bog Forest Soil	VAAANASARGQRAALLASPLHELTGFYLAVDCLAPRCSGERSFAVAELASFYGRDSTVGQVLRRMRCSGTCGGRVGAAWLVTGPILNARVRPRRVPVLGPEARE
Ga0209166_104620181	3300027857	Surface Soil	MFAYMAAANASARGQRVAILASPLGELTGFSLVVNCGRPGCGGERTYTVAALAACYGAGMTVGEALCRMRCGRGCGGRGAVAWLATGAVLNQRIRPRRVPLLGPEARE
Ga0209006_101829781	3300027908	Forest Soil	MAAANASARGQRVAILGSPLRELTGFYLSVDCMTAGCGGERTYAVAELASFYGQDQTVGSVLRRMRCGTGCDGRVMAAWLATGPILNRRVRPRRIPLLGPEARE
Ga0209698_109434971	3300027911	Watersheds	MAAANASARGQRAALFASPLSELSGFCLVVDCLTPGCGGERTFAMSDLAGFYGVGRTVGDVLRRMRCSGGCGGRAGAAWLVTGSILNARVRPRRVPLLGPEARE
Ga0209069_110054411	3300027915	Watersheds	AAANASARGQRTAILASPLHELTGFYLAVDCLAPRCNGERTFAVAELATFYGRDSTVGQVLRRMRCSGACGGRVGAAWLVTGPILSVRVRPRRVALLGPQARE
Ga0307322_101547781	3300028710	Soil	KRLRLRLARPLCSSYVHTMAANASARGQRAAILASPLHELTGFYLVVDCLTSDCARERTFAVAELASFYGTQRTVGEVLRRMRCAGGCGGRVGGAWLVTGPILNRRVRPRRVPLLGPEAR
Ga0307280_103160631	3300028768	Soil	MAPTPGGKRDFARFDCIQCSRYILSIMAAANASARGQRAAILASPLSELTGFNLTVDCLSPGCARERSFTVADLATFYGGGRTVGDVLRRMRCSGACDDRVGSAWLVTGPVLNTSVRPRRVALLWPDARE
Ga0307288_102161922	3300028778	Soil	AGRDPGQSAPLADWLLPGGDCLTSDCARERTFAVAELASFYGTQRTVGEVLRRMRCAGGCGGRVGGAWLVTGPILNRRVRPRRVPLLGPEARE
Ga0310686_1123564161	3300031708	Soil	MAAANASARGQRAAILASPLHELTGFCLSVDCLAAGCGGERTYALASLASFYGGDVMVGDVLRRMRCSGGCGGRVGAAWLVTGPVLNQRVRPR
Ga0307476_114184631	3300031715	Hardwood Forest Soil	RLRLFDGRDRGRDRAVASTAMFPLCSVMAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0306925_114830631	3300031890	Soil	MAAANASARGQRAAILSSPLHEFSSFLLAVDCFGPECGGKRSFAIAELANFYGQDRTVGQVLRRMRCSGACGGQVAAAWLETGPILNARVRPRRVPLLGPEARE
Ga0308174_106880831	3300031939	Soil	MAANTSARAQRTAILASRLRELDGFCLVVDCGTPGCRGERSYLIASLAAMLGADRTVGDVLARMRCTPGCEAPVATAWLATGPVLNARVRPRRVALRGREARD
Ga0308173_121637891	3300032074	Soil	LASKLRELDGFCLVVDCGTPGCRGERSYLIASLAAMLGADRTVGDVLARMRCTPGCDGPVAAAWLATGPVLNARVRPRRVALRGREVRD
Ga0307470_103516201	3300032174	Hardwood Forest Soil	FDGRDRGRDRAVASTAMFPLCSVMAAANASPRAQRSAILASPLHELTGFCLEVDCLAVGCRRNRTFAIAELASFYGRDRTVGEVLRRMRCSGECGGRVRAAWLVTGPVLNMRVRPRRVALLGAETRG
Ga0335082_116073311	3300032782	Soil	MAAANASARGQRVAILASPLSELTGFCLVVDCLTPGCAGERTFVIAELATFYGAETRVGDVLRRMRCSGGCCSRVAAAWLATGPVLNTRVRPRRVAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054233

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences