Metagenome / Metatranscriptome Family F054185

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054185
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	67 residues
Representative Sequence	RNPLRQQIVRSGAFSEYLVHQVLRLMIERCEALDLYVRGPRRELKAHLLWVIARLAESYEERQLPRVAL
Number of Associated Samples	119
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.52 %
% of genes near scaffold ends (potentially truncated)	92.86 %
% of genes from short scaffolds (< 2000 bps)	82.14 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.714 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.48% β-sheet: 0.00% Coil/Unstructured: 50.52%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF07478	Dala_Dala_lig_C	36.43
PF00326	Peptidase_S9	5.71
PF13419	HAD_2	2.14
PF13535	ATP-grasp_4	1.43
PF07676	PD40	1.43
PF13417	GST_N_3	0.71
PF00076	RRM_1	0.71
PF00293	NUDIX	0.71
PF15887	Peptidase_Mx	0.71
PF00144	Beta-lactamase	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.71
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.57 %
Unclassified	root	N/A	6.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.57 %
Unclassified	root	N/A	6.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.57 %
Unclassified	root	N/A	6.43 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	74.29 %
Unclassified	root	N/A	6.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	74.29 %
Unclassified	root	N/A	6.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.43 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	74.29 %
Unclassified	root	N/A	6.43 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	74.29 %
Unclassified	root	N/A	6.43 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10068672	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	785	Open in IMG/M
3300002245\|JGIcombinedJ26739_101072323	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	692	Open in IMG/M
3300004080\|Ga0062385_10556499	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	718	Open in IMG/M
3300004082\|Ga0062384_100141677	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1350	Open in IMG/M
3300005602\|Ga0070762_10037041	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300005602\|Ga0070762_10521867	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	781	Open in IMG/M
3300005994\|Ga0066789_10442988	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	542	Open in IMG/M
3300006086\|Ga0075019_10671230	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	654	Open in IMG/M
3300006102\|Ga0075015_100837835	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	554	Open in IMG/M
3300006162\|Ga0075030_101467186	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	534	Open in IMG/M
3300006176\|Ga0070765_101227972	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	708	Open in IMG/M
3300009500\|Ga0116229_10032985	All Organisms → cellular organisms → Bacteria → Proteobacteria	5701	Open in IMG/M
3300009500\|Ga0116229_10446287	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1075	Open in IMG/M
3300009500\|Ga0116229_10879808	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	724	Open in IMG/M
3300009510\|Ga0116230_10268362	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1362	Open in IMG/M
3300009709\|Ga0116227_10497171	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	926	Open in IMG/M
3300009759\|Ga0116101_1128232	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	608	Open in IMG/M
3300010159\|Ga0099796_10003567	Not Available	3633	Open in IMG/M
3300010339\|Ga0074046_10063564	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300010339\|Ga0074046_10287855	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1012	Open in IMG/M
3300011271\|Ga0137393_10508971	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1033	Open in IMG/M
3300012918\|Ga0137396_10240261	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1335	Open in IMG/M
3300012924\|Ga0137413_10196796	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1352	Open in IMG/M
3300012930\|Ga0137407_10456766	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1189	Open in IMG/M
3300012944\|Ga0137410_10267307	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1345	Open in IMG/M
3300014169\|Ga0181531_10609879	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	677	Open in IMG/M
3300014495\|Ga0182015_10939210	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	540	Open in IMG/M
3300014501\|Ga0182024_10408116	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300014501\|Ga0182024_11349914	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	823	Open in IMG/M
3300014502\|Ga0182021_11058621	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	976	Open in IMG/M
3300014838\|Ga0182030_10250787	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300015051\|Ga0137414_1256841	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300015052\|Ga0137411_1212110	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	514	Open in IMG/M
3300015197\|Ga0167638_1041884	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1019	Open in IMG/M
3300015206\|Ga0167644_1001525	All Organisms → cellular organisms → Bacteria	16111	Open in IMG/M
3300015242\|Ga0137412_10000343	All Organisms → cellular organisms → Bacteria	31981	Open in IMG/M
3300015264\|Ga0137403_11619932	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	501	Open in IMG/M
3300016750\|Ga0181505_10822723	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	765	Open in IMG/M
3300017946\|Ga0187879_10384872	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	777	Open in IMG/M
3300017996\|Ga0187891_1130907	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	911	Open in IMG/M
3300018008\|Ga0187888_1049180	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300018020\|Ga0187861_10464391	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	524	Open in IMG/M
3300018034\|Ga0187863_10896909	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	504	Open in IMG/M
3300018043\|Ga0187887_10129509	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300018044\|Ga0187890_10714140	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	566	Open in IMG/M
3300019256\|Ga0181508_1395750	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	509	Open in IMG/M
3300020581\|Ga0210399_11346909	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	560	Open in IMG/M
3300020583\|Ga0210401_10202126	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300020583\|Ga0210401_11026459	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	683	Open in IMG/M
3300021170\|Ga0210400_10424967	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1096	Open in IMG/M
3300021181\|Ga0210388_10034220	All Organisms → cellular organisms → Bacteria	4187	Open in IMG/M
3300021401\|Ga0210393_10977289	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	686	Open in IMG/M
3300021402\|Ga0210385_10513808	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	909	Open in IMG/M
3300021402\|Ga0210385_10929663	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	668	Open in IMG/M
3300021404\|Ga0210389_10402347	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1077	Open in IMG/M
3300021404\|Ga0210389_11208945	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	581	Open in IMG/M
3300021406\|Ga0210386_10027639	All Organisms → cellular organisms → Bacteria → Proteobacteria	4446	Open in IMG/M
3300021474\|Ga0210390_10888885	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	733	Open in IMG/M
3300021475\|Ga0210392_10019612	All Organisms → cellular organisms → Bacteria	3810	Open in IMG/M
3300021475\|Ga0210392_10175528	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1481	Open in IMG/M
3300021479\|Ga0210410_10185474	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300022726\|Ga0242654_10406265	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	523	Open in IMG/M
3300022726\|Ga0242654_10430240	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	512	Open in IMG/M
3300024246\|Ga0247680_1058877	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	560	Open in IMG/M
3300025500\|Ga0208686_1016170	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300025544\|Ga0208078_1108590	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	558	Open in IMG/M
3300025625\|Ga0208219_1124905	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	572	Open in IMG/M
3300025633\|Ga0208480_1125452	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	595	Open in IMG/M
3300026489\|Ga0257160_1103255	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	514	Open in IMG/M
3300026555\|Ga0179593_1015610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4556	Open in IMG/M
3300026557\|Ga0179587_10189936	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1297	Open in IMG/M
3300027002\|Ga0209110_1007501	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1191	Open in IMG/M
3300027505\|Ga0209218_1039358	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	937	Open in IMG/M
3300027583\|Ga0209527_1141334	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	534	Open in IMG/M
3300027587\|Ga0209220_1026728	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300027783\|Ga0209448_10213150	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	640	Open in IMG/M
3300027812\|Ga0209656_10389089	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	627	Open in IMG/M
3300027857\|Ga0209166_10531630	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	602	Open in IMG/M
3300027895\|Ga0209624_10120802	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300027905\|Ga0209415_10592166	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	824	Open in IMG/M
3300027911\|Ga0209698_11223229	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	552	Open in IMG/M
3300028146\|Ga0247682_1109380	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	518	Open in IMG/M
3300028560\|Ga0302144_10233222	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	596	Open in IMG/M
3300028747\|Ga0302219_10455207	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	502	Open in IMG/M
3300028765\|Ga0302198_10188042	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1032	Open in IMG/M
3300028773\|Ga0302234_10179063	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	919	Open in IMG/M
3300028783\|Ga0302279_10374096	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	603	Open in IMG/M
3300028879\|Ga0302229_10050709	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300029882\|Ga0311368_10549809	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	822	Open in IMG/M
3300029907\|Ga0311329_10531814	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	792	Open in IMG/M
3300029910\|Ga0311369_10495840	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1039	Open in IMG/M
3300029910\|Ga0311369_10592394	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	927	Open in IMG/M
3300029911\|Ga0311361_10106976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3929	Open in IMG/M
3300029911\|Ga0311361_10670167	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	962	Open in IMG/M
3300029913\|Ga0311362_10972223	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	668	Open in IMG/M
3300029922\|Ga0311363_10153411	All Organisms → cellular organisms → Bacteria	2945	Open in IMG/M
3300029953\|Ga0311343_10669951	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	874	Open in IMG/M
3300029954\|Ga0311331_10643750	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	992	Open in IMG/M
3300029954\|Ga0311331_10682462	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	952	Open in IMG/M
3300029954\|Ga0311331_11324163	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	599	Open in IMG/M
3300029992\|Ga0302276_10100795	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300029994\|Ga0302283_1007400	All Organisms → cellular organisms → Bacteria → Proteobacteria	7580	Open in IMG/M
3300030007\|Ga0311338_11209811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	716	Open in IMG/M
3300030503\|Ga0311370_12250343	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	534	Open in IMG/M
3300030507\|Ga0302192_10195098	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	877	Open in IMG/M
3300030519\|Ga0302193_10626205	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	517	Open in IMG/M
3300030520\|Ga0311372_12905574	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	522	Open in IMG/M
3300030617\|Ga0311356_10302742	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300030618\|Ga0311354_10652878	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1013	Open in IMG/M
3300030688\|Ga0311345_10367186	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1312	Open in IMG/M
3300030688\|Ga0311345_11193572	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	554	Open in IMG/M
3300030693\|Ga0302313_10422798	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	529	Open in IMG/M
3300030739\|Ga0302311_10476204	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	863	Open in IMG/M
3300030763\|Ga0265763_1039991	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	562	Open in IMG/M
3300030879\|Ga0265765_1027634	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	712	Open in IMG/M
3300031057\|Ga0170834_106867796	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	637	Open in IMG/M
3300031057\|Ga0170834_111075027	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	567	Open in IMG/M
3300031122\|Ga0170822_11119562	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1000	Open in IMG/M
3300031231\|Ga0170824_116395204	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	904	Open in IMG/M
3300031231\|Ga0170824_116688484	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	812	Open in IMG/M
3300031232\|Ga0302323_102194252	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	629	Open in IMG/M
3300031236\|Ga0302324_100907026	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1211	Open in IMG/M
3300031259\|Ga0302187_10403968	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	645	Open in IMG/M
3300031446\|Ga0170820_16466662	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	834	Open in IMG/M
3300031474\|Ga0170818_111150758	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	976	Open in IMG/M
3300031525\|Ga0302326_12030154	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	742	Open in IMG/M
3300031708\|Ga0310686_107092903	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	913	Open in IMG/M
3300031708\|Ga0310686_114892475	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	895	Open in IMG/M
3300031708\|Ga0310686_115411945	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	633	Open in IMG/M
3300031718\|Ga0307474_10019320	All Organisms → cellular organisms → Bacteria → Proteobacteria	4953	Open in IMG/M
3300031754\|Ga0307475_10933131	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	684	Open in IMG/M
3300032897\|Ga0335071_11668051	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	582	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.71%
Host-Associated	Host-Associated	4.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	15.71%
Plants	Host-Associated → Plants	4.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.57%
Peat	Environmental → Terrestrial → Peat	26.43%
Freshwater	Environmental → Aquatic → Freshwater	12.14%
Sediment	Environmental → Aquatic → Sediment	3.57%
Peat Moss	Host-Associated → Plants → Peat Moss	3.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	26.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.14%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	26.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.71%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	12.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	3.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.14%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.14%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.14%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.43%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.71%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.71%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027002	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10165371	3300000546	Quercus Rhizosphere	YLVHQVLRLMIARCEALNLFVRGSRRELKGQLLWVVARLAESYEERKLPRVAL*
JGI12659J15293_100686721	3300001546	Forest Soil	KAATLLRELRNPLRQQIVRSGAFSEYLVHQVLRLMIERCDSLNLYVRGPRRELKTHLLWVIARLAESYEERQLPRLSL*
JGIcombinedJ26739_1010723231	3300002245	Forest Soil	RPRAASVLREMRHGLRQQILRTGAFSEYLVHQVMRLMIERCESLNLHLRGSRRELKPHLLWVIARLAESYEERQLPRVSL*
Ga0062385_105564992	3300004080	Bog Forest Soil	RSGAFSEYLVYQVLRLMIERCDSLNLYMRGSRRGLKPQLLWVIARLAESYEERQLPRVSL
Ga0062384_1001416771	3300004082	Bog Forest Soil	LRRQIQRSGAFSEYLVHQVLRLMIERCESLDLYVRGSRRELKGQLLWVVARLAESYEDRKLPRVAL*
Ga0070762_100370411	3300005602	Soil	VLREMRNDLRLKILRSGAFSEYLVHQVLRLMIARCEALGLYLRGGRRELKPHLLWVIARLAESYEERQLPRVLL*
Ga0070762_105218672	3300005602	Soil	GAFSEYLVHQVLRLMIERCEGLGLYVRGPRRELKGELLWVASRLAESYEDRKLPRVTL*
Ga0066789_104429882	3300005994	Soil	SPKAASVLREMRAPLRQKIQRSGAFSEYLVHQVLRLMIERCERLGLYVRGPQRELDGQLLWAVARLAESYEERKLPRVAL*
Ga0075026_1010983152	3300006057	Watersheds	EYLVHQVLRLMIGRCESLNLYLRGPRRELKPHLLWVIARLAESYEERQLPRVTL*
Ga0075019_106712302	3300006086	Watersheds	APRAASVVREMRAALRQRIVAAGTCDDYLVHQILRLVVRRCDALGLYVRGPRRELRAHLTWLVSRLAERYGERQLPRVAI*
Ga0075015_1008378352	3300006102	Watersheds	RNPLRQQIVRSGAFSEYLVHQVLRLMIERCESLDLYVRGSRRELKAQLAWVVSRLAESYEERQLPRVAL*
Ga0075030_1014671861	3300006162	Watersheds	RHTLRRQMVRSGAFSEYLVHQVLRLVIERCEALDLRMRGSRRELKTHLLWVVARLAESYEERKLSRVSL*
Ga0070765_1012279721	3300006176	Soil	LRQQIVRSGAFSEYLVHQVLRLMIERCDSLNLYVRGPRRELRTHLLWAIARLAESYEERQLPRLSL*
Ga0116229_100329851	3300009500	Host-Associated	SDYLVHQVLRLIIERCEKLNLYVRGPRRELPAHLLWVIARLADSYEERRLPRVAL*
Ga0116229_104462872	3300009500	Host-Associated	GSGAFSEYLVHQVLRLVVERCDALELYVRGPRRELNAHLHWLIGRLAESYEERQLPRVAL
Ga0116229_108798082	3300009500	Host-Associated	LRQQIARRGAFSEYLVHQVLRLMIQRCESLNLYMRGSKRELKPHLLWVMARLAESYEERQLPRLAL*
Ga0116230_102683621	3300009510	Host-Associated	MVRTGGFSDYLVHQVMRLIIERSEKLNLYVRGPRRELLAHLVWVIARLAESYEERRLPRVAL*
Ga0116227_104971712	3300009709	Host-Associated	FSEYLVHQVLRLMIERCEALNLYLRGSRRELKPHLIWVIGRLAESYEDRQLPRVAL*
Ga0116101_11282322	3300009759	Peatland	EYLVHQVLRLMIERCEALDIYVRGPRRELRSQLSWVIARLAESYEERQLPRVAL*
Ga0099796_100035673	3300010159	Vadose Zone Soil	KAASVLREMRNPLRQQIVRSGAFSEYLVHQVLRLMIERSESLNLYLRGSRRELKVQLLWVIARLAESYEERQLPRVSL*
Ga0074046_100635641	3300010339	Bog Forest Soil	SVLREQRQELRQQIVRSGAFSEYLVHQVLRLMIARCDALHLYVRGPRRELKPHLKWVIARLAESYEERQLPRVAL*
Ga0074046_102878552	3300010339	Bog Forest Soil	TVLREMRNSLRQQILRSGAFREYLVHQVLRLMIERCEALNLYLRGPRRELKAHLLWVIARLSESYEERQLPRVAL*
Ga0137393_105089712	3300011271	Vadose Zone Soil	SGAFSEYLVHQVLRLMIERCESLNLYLRGSRRDLKPQLLWVIARLAESYEERQLPRVSL*
Ga0137396_102402611	3300012918	Vadose Zone Soil	QRILRSGAFSEYLVHQVLRLMIERCESLNLYLRGSRRELPAQLLWVIARLAESHEERQLPRVSL*
Ga0137413_101967961	3300012924	Vadose Zone Soil	GAFSEYLVHQVLRLMIERCERLDLYMRGSRRQLKSQLIWLIARLAESYEERQLPRVAL*
Ga0137407_104567662	3300012930	Vadose Zone Soil	ASVLREMRGSLRQQIQRSGAFSEYLVHQVLRLMIERCERLDLYVRAPRRELRGQLLWAVARLAESYEERKLPRVAL*
Ga0137410_102673072	3300012944	Vadose Zone Soil	GAFSEYLVHQVLRLMIERCESLNLYLRGSRRELKPQLLWVIARLAESHEERQLPRVSL*
Ga0181531_106098791	3300014169	Bog	ARAPKAASVLREMRNELRLGIMRSGAFSEYLVHQVLRLMISRCEALGLYLRGSRRELKPHLLWVIARLAESYEERRLPRVAL*
Ga0182015_109392102	3300014495	Palsa	RAASVLREMRNPLRQQIVRSGAFSEYLVHQVLRLMIERCESLNLFIAGPRRELKGHLLWVIAHLAESFEERQLPRVAL*
Ga0182024_104081163	3300014501	Permafrost	VLREMRAPLRQQIQRSGAFSEYLVHQVLRLMIVRCEALNLYVRGSRRELKGQLLWAVARLAESYEERKLPRVAL*
Ga0182024_113499142	3300014501	Permafrost	LRELRNPLRHQIVRSGAFSEYLVHQVTRLMIDRCEALDLYVRGPRRELKAHLLWVIARLAESYEERQLPRVAL*
Ga0182021_110586212	3300014502	Fen	VLRDMRNTLRKQNLRSGAFSEYLVHQVLRLMIERCEALNLYVRGARRDLKPHLLWVIARLGESFEERQLPRVAL*
Ga0182030_102507871	3300014838	Bog	PKAASVLRELRNPLRHQIVRSGAFSEYLVHQVLRLMIERCDALDLYVRGPRRELRAHLLWVIARLAESYEERQLPRVAL*
Ga0137414_12568414	3300015051	Vadose Zone Soil	VLRELRNPLRQQFVRTGAFSEYLVHQVLRLMIERCVRLDLYMRGSRRQLKSQLIWLIARLAESYEERQLPRVAL*
Ga0137411_12121101	3300015052	Vadose Zone Soil	DRPKASSVLRELRNPLRQRIVRSGAFSEYLVHQVLRLMIERTESLNLYLRGSRRELKVQLLWVIARLAESYEERQLPRVSL*
Ga0167638_10418842	3300015197	Glacier Forefield Soil	RTLRQRIVRSGNCNNYLVHQVLRLIIRRCTVLGLHVRGPRRELKPQLLRLIRRLADSYEERQLPRVAI*
Ga0167644_100152517	3300015206	Glacier Forefield Soil	RSSLRQQILRRGAFSEYLVHQVLRLMIARCESLNLYMRGSKRELKPHLLWVMARLAESYEERQLPRLAL*
Ga0137412_1000034332	3300015242	Vadose Zone Soil	SRILRELRNSLRQRIMRSGAFSEYLVHQVLRLMIERCDSLNLYLRGSRRELGAQLLWVIARLAESYEERQLPRVSL*
Ga0137403_116199321	3300015264	Vadose Zone Soil	RELRNPLRQRIVRSGAFSEYLVHQVLRLMIERTESLNLYLRGSRRELKVQLLWVIARLAESYEERQLPRVSL*
Ga0181505_108227232	3300016750	Peatland	AFSEYLVHQVLRLMIERCESLNLYLRGPRRELRAHLLWVIARLSESYEERQLPRVTL
Ga0187879_103848722	3300017946	Peatland	APKAASVLRELRNPLRQQIVRSGAFSEYLVHQVLRLMIDRCDALDLYVRGPRRELKAHLLWVIARLAESYEERQLPRLAL
Ga0187891_11309071	3300017996	Peatland	VLREMRNPLRQQIVRSGAFSEYLVHQVLRLMIERCDALDLYVRGPRRELKAHLVWVIARLAESYEERQLPRVAL
Ga0187888_10491803	3300018008	Peatland	GAFSEYLVHQVLRLMIGRSEGLDLYVRGSRRELKPQLIWVIARLAESYEERQLPRVAL
Ga0187861_104643912	3300018020	Peatland	RQHLVETGVFSEYLVHQVLRLVLERCEALDLYVRGPRRDLKAHLVWLVGRLAESYEERQLPRVAL
Ga0187863_108969092	3300018034	Peatland	VVREMRNSLRQQIVRSGAFSEYLVHQVLRLVIHRCESLNLYVRGPRRELKSQLVWLVARLAESYEERQLPRVTL
Ga0187887_101295091	3300018043	Peatland	SEYLVHQVLRLMIERSAGLGLYARGSRRELKPQLVWVIARLAESYEERQLPRVAL
Ga0187890_107141402	3300018044	Peatland	REMRNSLRQQIVRSGAFSEYLVHQVLRLMIERCESLNLHLRGPRRELKPHLLWVIARLAESYEERQLPRVAL
Ga0181508_13957502	3300019256	Peatland	RSAVKAVSVVREWRQPLRQHLVDTGVFSEYLVHQVLRLVLERCEALDLYVQGSRRELRSHLIWLIGRLAESYEERQLPRVAL
Ga0210399_113469092	3300020581	Soil	SGAFSDYLVHQVLRLMIERCEALNLYVRGPRRGLKAQLLWVIARLAESHEERQLPRVSL
Ga0210401_102021263	3300020583	Soil	STAPRAARVLREMRNDLRLKILRSGAFSEYLVHQVLRLMITRCEALGLYLRGSRRELKPHLLWVIARLAESYEERQLPRVLL
Ga0210401_110264592	3300020583	Soil	ASGAFSEYLVHQVLRLMIERCERLGLYVRGSRRELKGQLLWVVARLAESYEDRKLPRVAL
Ga0210400_104249671	3300021170	Soil	RNPLRQRIVRSGAFSEYLVHQVLRLMIERSESLNLYLRGSRHELKVQLLWVIARLAESYEERQLPRVSL
Ga0210388_100342204	3300021181	Soil	MRNPLRQQIVRSGAFSEYLVHQVLRLMIERCEALDLYVRGPRRELKAHLLWVIARLAESYEERQLPRVAL
Ga0210393_109772891	3300021401	Soil	LRELRNPLRQQIVRSGAFSEYLVHQVLRLMVDRCEGLDLYVRGSRRELKGQLVWVIARLAESYEERQLPRVAL
Ga0210385_105138082	3300021402	Soil	SGAFSEYMVHQVLRLMILRCEALNLYVRGSRRELKGQLVWVVARLAESYEERKLPRVAL
Ga0210385_109296631	3300021402	Soil	QILRSGAFSEYLVHQVLRLMIERCEALNLYVRGPRRGLKAQLLWVIARLAESHEERQLPRVSL
Ga0210389_104023472	3300021404	Soil	RQQIQRSGAFSEYLVHQVLRLMILRCEALNLYVRGSRRELKGQLKWVVARLAESYEERKLPRVAL
Ga0210389_112089451	3300021404	Soil	HRSGAFSEYLVHQVLRLMILRCDALNLYVRGSRRELKSELLWVVARLAESYEERQLPRVA
Ga0210389_112354452	3300021404	Soil	YLVHQVLRLMIERCEALNLYVRGPRRGLKAQLLWVIARLAESHEERQLPRVSL
Ga0210387_114749432	3300021405	Soil	EYLVHEVLRLMISRSESLNLYLRGPRRELKAHLLWVIARLAESYEERQLPRVAL
Ga0210386_100276391	3300021406	Soil	VLREMRAALRQQIQRSGAFSEYLVHQVLRLMIVRCEALNLYVRGSRRELKGQLLWVVARLAESYEERKLPRVAL
Ga0210390_108888851	3300021474	Soil	RNPLRQQIVRSGAFSEYLVHQVLRLMIERCEALDLYVRGPRRELKAHLLWVIARLAESYEERQLPRVAL
Ga0210392_100196121	3300021475	Soil	QQIQHSGVFSEYLVHQVLRLMISRCEALNLYVRGSRRGLKPQLLWVVARLAESYEERKLPRVAL
Ga0210392_101755282	3300021475	Soil	PKASRVLRELRNPLRQRIMRSGAFSEYLVHQVLRLMIERCDSLNLYLRGSRRELGAQLLWVIARLAESYEERQLPRVSL
Ga0210410_101854743	3300021479	Soil	FSEYLVHQVLRLLIVRSEALNLYVRGSRRELKGQLKWVVARLAESYEERKLPRVAL
Ga0242654_104062651	3300022726	Soil	SSVLRELRNPLRQRIVRSGAFSEYLVHQVLRLMIERSESLNLYLRGSRRELKVQLLWVIARLAESYEERQLPRVSL
Ga0242654_104302402	3300022726	Soil	RNPLRQQIVRSGAFSEYLVHQVLRLMVDRCEALDLYMRGTRRELKGQLVWVIARLAESYEERQLPRVAL
Ga0247680_10588771	3300024246	Soil	RSGASSEYLVHQVLRLMIERCESLNLYVRGPRRELKAHLLWVIARLAESYEERQLPRVSL
Ga0208193_10496491	3300025463	Peatland	LVHQVLRLMIMRCEALNLYVRGSRRELKGQLLWVVARLAESYEERKLPRVAL
Ga0208686_10161703	3300025500	Peatland	VETGVFSEYLVHQVLRLVLERCEALDLYVRGPRRDLKAHLVWLVGRLAESYEERQLPRVA
Ga0208078_11085902	3300025544	Arctic Peat Soil	FSGYLMHQVLRLMIARCEALNLYVRGPRRELKGQLLWVVARLAESYEERKLPRVAL
Ga0208219_11249051	3300025625	Arctic Peat Soil	LRQQIQRSGAFSEYLVHQVLRLMIARCEALNLYVRGSRRELKGQLLWVVARLAESYEERKLPRVAL
Ga0208480_11254522	3300025633	Arctic Peat Soil	SPKAASVLREMRGPLRQQIQRSGAFSEYLVHQVLRLMIMRCEALNLYVRGPRRELKSQLLWVVARLSESHEERKLPRVAL
Ga0257160_11032551	3300026489	Soil	EYLVHQVLRLMIERCESLNLYLRGSRRELGAQLLWVIARLAESYEERQLPRVSL
Ga0179593_10156107	3300026555	Vadose Zone Soil	RNPLRQQIVRSGAFSEYLVHQVLRLMVDRCEGLDLYVRGSRRELKGQLVWVIARLAESYEERQLPHVAL
Ga0179587_101899361	3300026557	Vadose Zone Soil	SSVLRELRNPLRQRILRSGAFSEYLVHQVLRLMIERCESLNLYLRGSRRELPAQLLWVIARLAESHEERQLPRVSL
Ga0209110_10075011	3300027002	Forest Soil	RQQIHRSGAFSEYLVHQVLRLMISRCDALNLYVRGSRRELKSELIWVVARLAESYEERKLPRVAL
Ga0209218_10393581	3300027505	Forest Soil	KAASVLREMRAPLRQQIQRSGAFSEYLVHQVLRLMISRCEALNLYVRGPRRELKGQLLWVVARLAESYEERKLPRVAL
Ga0209527_11413341	3300027583	Forest Soil	RELRNPLRQRIVRSGAFSEYLVHQVLRLMIDRCESLNLYLRGSRRELKPQLLWVIARLAESYEERQLPRVSL
Ga0209220_10267283	3300027587	Forest Soil	NPLRQRIVRSGAFSEYLVHQVLRLMIERCDSLNLYVRGSRRSLKPQLLWVIARLAESHEERQLPRVSL
Ga0209448_102131502	3300027783	Bog Forest Soil	ITLRQQILRSGAFSEYLVHQVLRLMIARSERLGLYVRGSRRELKGELLWVVARLAESYEDRKLPRVAL
Ga0209656_103890891	3300027812	Bog Forest Soil	AFSEYLVHQVLRLMIERCESLNLYIRGPRRELKPHLLWVIGRLAESYEERQLPRVAL
Ga0209166_105316302	3300027857	Surface Soil	AFSEYLVHQVLRLMISRCEALNLYLRGPRRELKAHLLWVIARLAESYEERQLHRVAL
Ga0209624_101208023	3300027895	Forest Soil	RNDLRLKILRSGAFSEYLVHQVLRLMITRCEALGLYLRGSRRELKPHLLWVIARLAESYEERQLPRVLL
Ga0209415_105921661	3300027905	Peatlands Soil	RELRHPLRQQIVRSGAFSEYLVHQVLRLMIERCESLNLYIRGPRRELKAHLLWVIGRLAESYEERQLPRVAL
Ga0209698_112232292	3300027911	Watersheds	RTSLRQQLVAAGTCDDYLVHQILRLIVRRCDSLGLYIRGPRRELDAHLMWLVRRLAESYGERQLPRVAI
Ga0247682_11093802	3300028146	Soil	DLRNSLRAQILRSGASSEYLVHQVLRLMIERCESLNLYVRGPRRELKAHLLWVIARLAESYEERQLPRVSL
Ga0302144_102332222	3300028560	Bog	ERRAQLRQRIVASGACGDYLVHQILRLIVRRCEALDLYVRGPRRELDAHLLWLVSRLAESYGERQLPRVAL
Ga0302219_104552072	3300028747	Palsa	RNDLRLGIMRSGAFSEYLVHQVLRLMISRCDSLGLYLRGSRRELKPHLLWVIARLAESYEERQLPRVAL
Ga0302198_101880421	3300028765	Bog	SGACGDYLVHQILRLIVRRCEALDLYVRGPRRELDAHLLWLVSRLAESYGERQLPRVAL
Ga0302234_101790631	3300028773	Palsa	SVLREMRNDLRLKILRSGGFSEYLVHQVLRLMISRCEAQGLYLRGSRRELKPHLLWVIARLAESYEERQLPRVAL
Ga0302279_103740962	3300028783	Bog	EMRNPLRQQIVRSGAFSEYLVHQVLRLMIERCDALDLYVRGPRRELKAHLVWVIARLAESYEERQLPRVAL
Ga0302228_103397802	3300028808	Palsa	LVHQVLRLMISRCEAQGLYLRGSRRELKPHLLWVIARLAESYEERQLPRVAL
Ga0302229_100507091	3300028879	Palsa	APRAASVLREMRNDLRLKILRSGAFSEYLVHQVLRLMISRCEALGLYLRGSRRELKPHLLWVIARLAESYEERQLPRVAL
Ga0311368_105498092	3300029882	Palsa	SVLREMRNDLRLKTLRSGAFSEYLVHQVLRLMISRCEALGLYLRGSRRELKRHLLWVIARLAESYEERQLPRVAL
Ga0311329_105318142	3300029907	Bog	RQRLLRSGAFSEYLVHQVLRLMIERCESLGLYLRGSRRDLKSQLLWITARLAESYEERQLPRVSL
Ga0311369_104958401	3300029910	Palsa	DLRLKILRSGAFSEYLVHQVLRLMISRCEALGLYLRGSRRELKPHLLWVIARLAESYEERQLPRVAL
Ga0311369_105923942	3300029910	Palsa	QSVRTGTFSEYLVHQVLRLMIHRCERLELYVRGSRRELKPQLLWVIGRLAESYEERQLPRVAL
Ga0311361_101069761	3300029911	Bog	DYLVHQILRLIVRRCEALDLYVRGPRRELDAHLLWLVSRLAESYGERQLPRVAL
Ga0311361_106701672	3300029911	Bog	RAAFSEYLVHQVLRLMIERCETLDLYVRGSRRELKPQLVWVIARLAESYEERQLPRVAL
Ga0311362_109722231	3300029913	Bog	HQIVRSGAFSEYLVHQVLRLMIERCDALDLYVRGPRRELRAHLLWVIARLAESYEERQLPRVAL
Ga0311358_108991671	3300029915	Bog	YLVHQVLRLMIERCDALDLYVRGPRRELKAHLVWVIARLAESYEERQLPRVAL
Ga0311363_101534115	3300029922	Fen	FTPVPHSHRALKAASVVRERRAQLRQRIVASGACGDYLVHQILRLIVRRCEALDLYVRGPRRELDAHLLWLVSRLAESYGERQLPRVAL
Ga0311343_106699512	3300029953	Bog	AFSEYLVHQVLRLMIERCESLGLYLRGSRRDLKSQLLWITARLAESYEERQLPRVSL
Ga0311331_106437501	3300029954	Bog	VLREMRNPLRLKIVRSGAFSEYLVHQVLRLMIERCEALNLYQRGPRRELKSHLLWVIARLAESYEERQLPRVAL
Ga0311331_106824621	3300029954	Bog	RGMRNHLRNQSVRGGAFSEYLVHQVLRLMIERCETLDLHLRGSRRGLTAQLTWVIARLAESYEERQLPRVAL
Ga0311331_113241632	3300029954	Bog	VETGAFSEYLVHQVLRLVVDRCEQLDLYVRGPRRELKGHLIWLVGRLAESYEERQLPRVA
Ga0302276_101007953	3300029992	Bog	FSEYLVHQVLRLMIERCESLGLYLRGSRRDLKSQLLWITARLAESYEERQLPRVSL
Ga0302283_10074001	3300029994	Fen	RHVLRQEIVNSGAFSEYLVHQVLRLVIGRCEALNLYVTGSRRELKGHLKWAIARLADSFEERQLPRVAL
Ga0311338_112098111	3300030007	Palsa	MRNALRQQSVRTGTFSEYLVHQVLRLMIHRCERLELYVRGSRRELKPQLLWVIARLAESYEERQLPR
Ga0311370_122503432	3300030503	Palsa	YLVHQVLRLMIERCEALNLYLRGPRRELKPHLLWVIARLAESYEDRQLPRVAL
Ga0302192_101950981	3300030507	Bog	AASVLRDMRAPLRNQLVRHGAFSEYLVHQVLRLMIERCESLDLHVRGPRRELKGQVAWVVGRLAESYEERQLPRVAL
Ga0302193_106262051	3300030519	Bog	PRAARVVREYRHVLRQEIVNSGAFSEYLVHQVLRLVIGRCEAVNLYVTGSRRELKGHLKWAIARLADSFEERQLPRVAL
Ga0311372_129055741	3300030520	Palsa	GAFSEYLVHQVLRLMISRSESLNLYLRGPRRELKAHLLWVIARLAESYEERQLPRVAL
Ga0311356_103027421	3300030617	Palsa	SEYLVHQVLRLMISRCESLSLYLRGSRRELKPHLLWVIARLAESYEERRLPRVAL
Ga0311354_106528782	3300030618	Palsa	RQHFLRSGAFSEYLVHQVLRLMIERCESLNLYVRGPRRALKPQLQWVIARLAESYEERQLPRVSL
Ga0311345_103671861	3300030688	Bog	ASGVFSEYLVHQVLRLVLARCEALDLYLRGPRRELKPHLIWVIGRLAESYEERQLPRVAL
Ga0311345_111935722	3300030688	Bog	MRNPLRLKIVRSGAFSEYLVHQVLRLMIERCEALNLYLRGPRRELKSHLLWVIARLAESYEERQLPRVAL
Ga0302313_104227982	3300030693	Palsa	MRNDLRVGIMRSGAFSEYLVHQVLRLMIARCESLGLYLRGSRRELKPHLLWVIARLAESYEERRLPRVAL
Ga0302311_104762042	3300030739	Palsa	EMRNDLRLKTLRSGAFSEYLVHQVLRLMISRCEALGLYLRGSRRELKRHLLWVIARLAESYEERQLPRVAL
Ga0265763_10399912	3300030763	Soil	REMRLALRQQILRSGAFSEYLVHQVLRLMIERCEALNLYVRGSRRSLKAELLWVIARLAESHEERQLPRVSL
Ga0265765_10276341	3300030879	Soil	KIVRSGAFSEYLVHQVLRLMIERCEALDLYVRGPRRELKAHLLWVIARLAESYEERQLPRVAL
Ga0170834_1068677962	3300031057	Forest Soil	CEMRAPLRQQIQRSGAFSEYLVHQVLRLMIVRCEALNLYVRGSRRELRTELLWVVARLAESYEERKLPRVAL
Ga0170834_1110750272	3300031057	Forest Soil	ILRSGASSEYLVHQVLRLMIERCEALNLYVRGPRRELKAHLLWVIARLAESYEERQLPRVSL
Ga0170822_111195622	3300031122	Forest Soil	KPWRQRIVRSGAFSEYLVHQVLRLMIERSESLNLYLRGSRRELKVQLLWVIARLAESYEERQLPRVSL
Ga0170824_1163952042	3300031231	Forest Soil	LRTGAFSEYLLHQVLRLMIERCDSLNLYLRGPRRELRPHLVWAIARLAESYEERQLPRVA
Ga0170824_1166884841	3300031231	Forest Soil	FSEYLVHQVLRLMVERCADLDLYVRGSRRELKGQLVWVIARLAESYEERQLPRVML
Ga0302323_1021942522	3300031232	Fen	QQFMRSGVFSEYLVHQVLRLMIERCDSLNLFLRGSRRELKPHLVWVISRLAESYEERQLPRVAL
Ga0302324_1009070261	3300031236	Palsa	RAAPRAATLVRELRNPLRQRMAGSGGFSEYLVHQVLRLIIERCEKLNLYVRGPRRELVPHLVWVIARLAESYEERQLPRVAL
Ga0302187_104039681	3300031259	Bog	EYRHVLRQEIVNSGAFSEYLVHQVLRLVIGRCEALNLYVTGSRRELKGHLKWAIARLADSFEERQLPRVAL
Ga0170820_102405602	3300031446	Forest Soil	LVHQVLRLMIERCDSLNLYLRGPRRELRPHLVWAIARLAESYEERQLPRVAL
Ga0170820_164666622	3300031446	Forest Soil	GAFSEYLVHQVLRLMIVRCEALNLYVRGSRRELRAELLWVVARLAESYEERKLPRVAL
Ga0170818_1111507581	3300031474	Forest Soil	PLRQQILRTGAFSEYLLHQVLRLMIERCEALNLYVRGPRRELKAHLVWVIARLAESYEERQLPRVSL
Ga0302326_120301541	3300031525	Palsa	QILRSGAFSEYLVHQVLRLMIERSEALNLHLRGPRRELKAHLLWVIARLAESYEDRQLPRVSL
Ga0310686_1070929031	3300031708	Soil	ALRQQIQRSGAFSEYLVHQVLRLMIVRCEALNLYVRGSRRELRGQLVWVVARLAESYEERKLPRVAL
Ga0310686_1148924752	3300031708	Soil	QRSGAFSEYLVHQVLRLMIMRCEALNLYVRGSRRELKGQLLWVVARLAESYEERKLPRVA
Ga0310686_1154119451	3300031708	Soil	RKQIVRSGAFSEYLVYQVLRLMIERCESLNLYVRGSRRELKPHLLWVIARLAESHEDRQLPHVAL
Ga0307474_100193205	3300031718	Hardwood Forest Soil	QQIQRSGAFSEYLVHQVLRLMIMRCEALNLYVRGSRRELKGQLLWVVARLAESYEERKLPRVAL
Ga0307475_109331312	3300031754	Hardwood Forest Soil	QQIVRSGAFSEYLVHQVLRLMVDRCEGLDLYVRGSRRELKAQLVWVVARLAESYEERQLPRVAL
Ga0335071_116680512	3300032897	Soil	KAAPLLRALRAPLRQEIVRSGAFSEYLVHQVLRLMIERAEALQLYLRGPRRELKAHLKWAVARLAESYEERQLPRVAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054185

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences