NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F054169

Metagenome Family F054169

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054169
Family Type Metagenome
Number of Sequences 140
Average Sequence Length 101 residues
Representative Sequence MAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Number of Associated Samples 117
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 37.14 %
% of genes from short scaffolds (< 2000 bps) 82.14 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.429 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(17.143 % of family members)
Environment Ontology (ENVO) Unclassified
(37.857 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(73.571 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.
1F14TC_1042479862
2JGI25614J43888_100694841
3Ga0062593_1002257973
4Ga0062593_1034082501
5Ga0062591_1028636152
6Ga0066677_102783352
7Ga0066683_106443001
8Ga0066680_100000752
9Ga0066675_109292032
10Ga0070690_1002423182
11Ga0068869_1008392191
12Ga0068868_1000612673
13Ga0070689_1000269903
14Ga0070689_1012054041
15Ga0070687_1004883761
16Ga0070692_106789751
17Ga0070675_1018016321
18Ga0070671_1012109482
19Ga0070674_1009721772
20Ga0070701_101423972
21Ga0070705_1003038271
22Ga0070705_1017965842
23Ga0070700_1014167192
24Ga0070694_1016732922
25Ga0070708_1001357903
26Ga0070663_1002208363
27Ga0070678_1007471932
28Ga0070706_1005198972
29Ga0070707_1018659811
30Ga0070707_1020642062
31Ga0070698_1001656673
32Ga0070698_1003719113
33Ga0070697_1004745992
34Ga0070697_1006378582
35Ga0070695_1001392183
36Ga0070695_1008947361
37Ga0066701_101722902
38Ga0066692_101534982
39Ga0066707_105730431
40Ga0066699_109374812
41Ga0066708_107475971
42Ga0068854_1006286122
43Ga0066706_108798862
44Ga0070702_1000235692
45Ga0068852_1013530442
46Ga0068866_112921392
47Ga0068861_1001090381
48Ga0068861_1010885311
49Ga0068863_1001208423
50Ga0068858_1019608762
51Ga0075365_101600273
52Ga0075365_103814171
53Ga0075364_103215442
54Ga0075364_107425062
55Ga0075367_101280853
56Ga0075369_100479503
57Ga0075428_1017082672
58Ga0075421_1000600355
59Ga0075421_1009176992
60Ga0075421_1017860441
61Ga0075431_1003332882
62Ga0075431_1006656582
63Ga0075433_117605381
64Ga0075425_10000150819
65Ga0075424_1022741032
66Ga0075435_1000217303
67Ga0075435_1006193401
68Ga0099827_115611571
69Ga0105245_122784022
70Ga0105247_103165771
71Ga0099792_105749742
72Ga0114129_105148512
73Ga0105243_130957871
74Ga0105249_131303301
75Ga0134127_104694493
76Ga0134121_120366061
77Ga0137391_100551414
78Ga0137375_100247603
79Ga0137361_102822261
80Ga0157282_103760131
81Ga0137394_103354653
82Ga0137416_119440371
83Ga0137410_102890071
84Ga0157378_118696521
85Ga0163162_128559112
86Ga0163163_126130832
87Ga0157380_100836712
88Ga0173480_111743882
89Ga0137409_104277892
90Ga0134069_11703261
91Ga0163161_109576622
92Ga0066662_128725691
93Ga0222622_100808471
94Ga0247746_10546171
95Ga0207653_100231062
96Ga0207645_100473133
97Ga0207684_100210192
98Ga0207684_103724962
99Ga0207684_103873582
100Ga0207662_103010133
101Ga0207646_100214637
102Ga0207681_100922732
103Ga0207659_118956121
104Ga0207687_118937422
105Ga0207644_102771841
106Ga0207709_105231171
107Ga0207670_101815522
108Ga0207669_101840792
109Ga0207689_102462302
110Ga0207668_115588272
111Ga0207677_101447023
112Ga0207703_108606252
113Ga0207703_108974662
114Ga0207678_111653141
115Ga0207708_110637033
116Ga0207708_110678861
117Ga0207641_100513854
118Ga0207676_101123962
119Ga0207675_1005198182
120Ga0207675_1013160771
121Ga0207675_1017280531
122Ga0207683_100412444
123Ga0209240_10902172
124Ga0209647_10301492
125Ga0209802_10192994
126Ga0209161_100907502
127Ga0209488_104718582
128Ga0209382_1000108439
129Ga0209382_104361722
130Ga0209382_107453252
131Ga0307282_104467472
132Ga0307304_104095182
133Ga0307304_105751901
134Ga0247827_111664332
135Ga0247826_112200162
136Ga0307468_1013507952
137Ga0310884_102722842
138Ga0310897_100675102
139Ga0310890_102368062
140Ga0247829_117994882
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.75%    β-sheet: 0.00%    Coil/Unstructured: 37.25%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSVSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
96.4%3.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Grasslands Soil
Soil
Soil
Soil
Grasslands Soil
Hardwood Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Endosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
3.6%7.1%7.9%2.9%4.3%17.1%4.3%7.9%3.6%4.3%10.7%2.9%2.9%3.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10424798623300000559SoilALMAADPVSDEEDALPLSEDELQAFVLRATVALSNPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRXXXCREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
JGI25614J43888_1006948413300002906Grasslands SoilMAVDPVSSDEDDALPLSEDELQAMVLRATVALANPPGSNAPEPRPRRDVVEEAYDTVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0062593_10022579733300004114SoilMAADSLSPDDGDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0062593_10340825013300004114SoilYPFLRTGHAAARRSPAPALMAAGPVSPEEEDALPLSEDELQAFVLRATVAVSNPPGSVAPEPRPRRDLVEEAYDSVLRLVREVRRLRRREDRAKDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0062591_10286361523300004643SoilQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0066677_1027833523300005171SoilMAGDPRILDDEDALPLGEDELQVLAVRATVALATPPGSVPPDPRPRRDALEEAYEAVLRLLREVRRLRRRDERSRAALRASVSTGDPAAMRSAIEDLLDEAL*
Ga0066683_1064430013300005172SoilMAADPVPSDDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0066680_1000007523300005174SoilVGGPAAPEEDDAALPLTDDELQGIAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRDDRAKGALRTALAEGDPAAMKRAIEDVLDDALCVRRG*
Ga0066675_1092920323300005187SoilMAADVPSDDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0070690_10024231823300005330Switchgrass RhizosphereMAAGPVSPDDDALPLSEDELQSLVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRHSLAVGDADSMKSAIEDVLDDSV*
Ga0068869_10083921913300005334Miscanthus RhizosphereMAAGHVSPDDDNALPLSEDELQALVMRATVALANPPGSTVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSI*
Ga0068868_10006126733300005338Miscanthus RhizosphereMAAGHVSPDDEDALPLSEDELQALVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0070689_10002699033300005340Switchgrass RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0070689_10120540413300005340Switchgrass RhizosphereMAGGPASPDEEDALPLSEDELQSLVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRHSLAVG
Ga0070687_10048837613300005343Switchgrass RhizospherePALMAAGSVSPDDDDALPLSEDELQALVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0070692_1067897513300005345Corn, Switchgrass And Miscanthus RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRGKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0070675_10180163213300005354Miscanthus RhizosphereMAGGPASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0070671_10121094823300005355Switchgrass RhizosphereMAAGSASADDDDALPLSEDELQGLVMRATVALANPPGSVAPEPRPRRDLVEEAYDGVLRLVREVRRLRRRQDRARDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0070674_10097217723300005356Miscanthus RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0070701_1014239723300005438Corn, Switchgrass And Miscanthus RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0070705_10030382713300005440Corn, Switchgrass And Miscanthus RhizosphereMGAGPASPDADDALPLSEDELQTLVMRATVALANPPGSVAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSM
Ga0070705_10179658423300005440Corn, Switchgrass And Miscanthus RhizosphereDDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0070700_10141671923300005441Corn, Switchgrass And Miscanthus RhizosphereMAAGHVSPDDDNALPLSEDELQALVMRATVALANPPGSVAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0070694_10167329223300005444Corn, Switchgrass And Miscanthus RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVL
Ga0070708_10013579033300005445Corn, Switchgrass And Miscanthus RhizosphereMAADPGPSDDDDALPLSEDDLQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0070663_10022083633300005455Corn RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMRSAIEDVLDDSV*
Ga0070678_10074719323300005456Miscanthus RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSM
Ga0070706_10051989723300005467Corn, Switchgrass And Miscanthus RhizosphereMAGAPVAPEDDDDALPLTDDELQALAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRGDRAKGALRSALAEGDPAVMKRAIEDVLDEAL*
Ga0070707_10186598113300005468Corn, Switchgrass And Miscanthus RhizosphereTADLRTLHPPAGRGPGLPLMAGAPVAPEDDDDALPLTDDELQALAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRGDRAKGALRSALAEGDPAVMKRAIEDVLDEAL*
Ga0070707_10206420623300005468Corn, Switchgrass And Miscanthus RhizosphereMAADPLPSDDDDALPLSEDELQAMVLRATVALANPPGSLAPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRTSLAVGDADSMKSAIEDVLDDSV*
Ga0070698_10016566733300005471Corn, Switchgrass And Miscanthus RhizosphereMAADPGPSDDDDALPLSEDELQAMVLHATVALASPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0070698_10037191133300005471Corn, Switchgrass And Miscanthus RhizosphereMAADPVPSDDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0070697_10047459923300005536Corn, Switchgrass And Miscanthus RhizosphereMAADPLPSDDDDALPLSEDELQAMVLRATVALASPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0070697_10063785823300005536Corn, Switchgrass And Miscanthus RhizosphereMAGAPVAPEDDDDALPLTDDELQALAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRGHRAKGALRSALAEGDPAVMKRAIEDVLDEAL*
Ga0070695_10013921833300005545Corn, Switchgrass And Miscanthus RhizosphereMAAGPVSPEEEDALPLSEDELQAFVLRATVAVSNPPGSVAPEPRPRRDLVEEAYDSVLRLVREVRRLRRREDRAKDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0070695_10089473613300005545Corn, Switchgrass And Miscanthus RhizosphereEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSI*
Ga0066701_1017229023300005552SoilMVGGPAAPEEDDAALPLTDDELQGIAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRDDRAKGALRTALAEGDPAAMKRAIEDVLDDALCVRRG*
Ga0066692_1015349823300005555SoilMVGGPAAPEEDDAALPLTDDELQGIAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVPRLRRRDDRAKGALRTALAEGDPAAMKRAIEDVLDDALCVRRG*
Ga0066707_1057304313300005556SoilMAGDPRILDDEDALPLGEDELQVLAVRATVALATPPGSVPPDPRPRRDALEEAYEAVLRLVREVRRLRRRDERSRAALRASVSTGDPAAMRSAIEDLLDEAL*
Ga0066699_1093748123300005561SoilMAGDPRILDDEDALPLGEDELQGLAVRATVALATPPGSVPPDPRPRRDALEEAYEAVLRLVREVRRLRRRDERSRAALRASVSTGDPAAMRSAIEDLLDEAL*
Ga0066708_1074759713300005576SoilMASGRPGADEDDALPLGDDELEAMALRATVALGNPPGSVPPDPRPRRDALAEAYDCVLRLVREVRGLRRREARAKDSLRAALASGDPGRTRAAIEDVLDETV*
Ga0068854_10062861223300005578Corn RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSM
Ga0066706_1087988623300005598SoilDDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0070702_10002356923300005615Corn, Switchgrass And Miscanthus RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0068852_10135304423300005616Corn RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMRSAIEDVLDDSV*
Ga0068866_1129213923300005718Miscanthus RhizosphereLPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0068861_10010903813300005719Switchgrass RhizosphereGHAAARRGPAAALMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0068861_10108853113300005719Switchgrass RhizosphereARHAAARRGPPAALMAGGPASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0068863_10012084233300005841Switchgrass RhizosphereEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRGKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0068858_10196087623300005842Switchgrass RhizosphereEDELQGLVMRATVALANPPGSVAPEPRPRRDLVEEAYDGVLRLVREVRRLRRRQDRARDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0075365_1016002733300006038Populus EndosphereMAADPVSDEEDALPLSEDELQAFVLRATVALSNPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075365_1038141713300006038Populus EndosphereDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075364_1032154423300006051Populus EndosphereMAADPVSDEEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDAIRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075364_1074250623300006051Populus EndosphereAADPVSDEEDALPLSEDELQAFVLRATVALSNPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075367_1012808533300006178Populus EndosphereMAADPVSDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRGKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075369_1004795033300006186Populus EndosphereMAGGPASPDEEDALPLSEDELQAFVLRATVALSNPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075428_10170826723300006844Populus RhizosphereMAADPLSDEEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075421_10006003553300006845Populus RhizosphereMSAGPVSPDDEDTLPLSEDELQALVLRATVALANPPGTSVPEPRPRRDLVEEAYDGVLRLVREVRRLRRREDRAKDALRHSLAVGDAESMKSAIEDVLDDSV*
Ga0075421_10091769923300006845Populus RhizosphereMAADPSSADDDDALPLSEDELQAMVLRATVALANPPGSVAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRHALSVGDADSMKSAIEDVLDDGV*
Ga0075421_10178604413300006845Populus RhizosphereMAGDAVADEDALPLRDDELQAMVLRATVALANPPGSVAPEPRPRRDVVAEAYDTVLRLVREVRRLRRREDRAKDALRNSLAVGDADSMKSVIEDVLDDSA*
Ga0075431_10033328823300006847Populus RhizosphereMAGDAVADEDALPLRDDELQAMVLRATVALANPPGSVAPEPRPRRDVVEEAYDTVLRLVREVRRLRRREDRAKDALRNSLAVGDADSMKSVIEDVFDDSV*
Ga0075431_10066565823300006847Populus RhizosphereMAADPSSADDDDALPLSEDELQAIVLRATVALANPPGSVAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRHALSVGDADSMKSAIEDVLDDGV*
Ga0075433_1176053813300006852Populus RhizosphereMAADPLPSDDDDALPLSEDELQAMVLRATVALANPPGSLAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0075425_100001508193300006854Populus RhizosphereMAAGHVSADDDNALPLSEDELQALVMRATVALANPPGSAAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075424_10227410323300006904Populus RhizosphereLRTLHAPARRGPPISLMAADPLPSDDDDALPLSEDELQAMVLRATVALANPPGSLAPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0075435_10002173033300007076Populus RhizosphereMAAGHVSADDDNALPLSEDELQALVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0075435_10061934013300007076Populus RhizosphereMGAGPASPDDDDALPLSEDELQTLVMRATVALANPPGSVAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDFLDDSV*
Ga0099827_1156115713300009090Vadose Zone SoilDELQAMVLRATVALASPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0105245_1227840223300009098Miscanthus RhizosphereMAAGPVASDDDNALPLSEDELQALVMRATVALANPPGSVAPEPRPRRDVVEEAYGGVLRLVREVRRLRRREDRAKDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0105247_1031657713300009101Switchgrass RhizosphereLQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVHDDSV*
Ga0099792_1057497423300009143Vadose Zone SoilMAADPVSSDEDDALPLSEDELQAMVLRATVALANPPGSNAPEPRPRRDVVEEAYDTVLRLVREVRRLRRREDRAKDALRTSLAVGDADSMKSAIEDVLDDSV*
Ga0114129_1051485123300009147Populus RhizosphereMAADALPSDDDDALPLSEDELEAMVLRATVALANPPGSLAPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0105243_1309578713300009148Miscanthus RhizospherePALMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0105249_1313033013300009553Switchgrass RhizospherePASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0134127_1046944933300010399Terrestrial SoilMGAGAASADDDDALPLSEDELQALVMRATVALANPPGSVAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDADSMKSAIEDVLDDSV*
Ga0134121_1203660613300010401Terrestrial SoilDALPLSEDELQSLVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRHSLAVGDADSMKSAIEDVLDDSV*
Ga0137391_1005514143300011270Vadose Zone SoilMAADPVPSDDDDALPLSEDELEAMVLRATVALASPPGSVAPEPRPRRDVVEEAYEAVLRLVREVRRLRRRGDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV*
Ga0137375_1002476033300012360Vadose Zone SoilMAADPVSSDEDDALPLSEDELQAMVLRAAVALANPPGSVAPEPRPRRDVVEEAYGAVLRLVREVRRLRRREDRAKDALRTSVAVGDAGSMKSAIEDVLDDSV*
Ga0137361_1028222613300012362Vadose Zone SoilMPSGPDASEEDDAGFPLSDDELYALSVRFSVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRQRRRHDRTKIALRAALADGDPAAMKRAIEDVLDEAY*
Ga0157282_1037601313300012904SoilMAAGPASPDEEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0137394_1033546533300012922Vadose Zone SoilMAGDPVASDDDVLPLSEDELEAMALRATVALANPPGSVAPEPRPRRDVVEEAYDAVLRLVREVRRARRREDRAKDALRTSLAVGDADSMKSAIEDVLDDSV*
Ga0137416_1194403713300012927Vadose Zone SoilMAGGPVAPEEDDAALPLSDDELQALAVRATVAQSSPPGSRPPDPRPRRDALEEAYDAVLRLVREVRRLRRRDERAKGALRAALAEGDPAAIKHAIEDVLDEAL*
Ga0137410_1028900713300012944Vadose Zone SoilMAGDAVAPDEDALPLSEDELQAMVLRATVALANPPGSVAPEPRPRRDVVEEAYDMVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSA*
Ga0157378_1186965213300013297Miscanthus RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVALANPPWSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAV
Ga0163162_1285591123300013306Switchgrass RhizosphereALMAAGHVSPDDEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0163163_1261308323300014325Switchgrass RhizosphereASALMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRGKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0157380_1008367123300014326Switchgrass RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV*
Ga0173480_1117438823300015200SoilLMAADSLSPDDGDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRHSLAVGDADSMKSAIEDVLDDSV*
Ga0137409_1042778923300015245Vadose Zone SoilMAADPVPSDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYDMVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSA*
Ga0134069_117032613300017654Grasslands SoilMAADPAASDDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRTSLAVGDPGSMKSAIEDVLDDSV
Ga0163161_1095766223300017792Switchgrass RhizosphereMAADPVSDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0066662_1287256913300018468Grasslands SoilMVGGPVAPEEDDAALPLTDDELQGIAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRDDRAKGALRTALAEGDPAAMKRAIEDVLDDALCVRRG
Ga0222622_1008084713300022756Groundwater SedimentMAGDAVAPDEDALPLSEDELQAMVLRATVALANPPGSVAPEPRPRRDVVEEAYDTVLRLVREVRRLRHREDRAKDALRNSLAVGDADSMKSAIEDVLDDSV
Ga0247746_105461713300022886SoilSGSIPPDDDDALPLSEDELQALVMRATVALANPPGSIAPEPRPRRDLVEEAYDGVLRLVREVRRLRRRQDRARDALRHSLAVGDADSMKSAIEDVLDDSV
Ga0207653_1002310623300025885Corn, Switchgrass And Miscanthus RhizosphereMAADPGPSDDDDALPLSEDDLQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV
Ga0207645_1004731333300025907Miscanthus RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207684_1002101923300025910Corn, Switchgrass And Miscanthus RhizosphereMAADPGPSDDDDALPLSEDELQAMVLRATVALASPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV
Ga0207684_1037249623300025910Corn, Switchgrass And Miscanthus RhizosphereMAADPVPSDDDDALPLSEDELQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV
Ga0207684_1038735823300025910Corn, Switchgrass And Miscanthus RhizosphereMAGAPVAPEDDDDALPLTDDELQALAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRGDRAKGALRSALAEGDPAVMKRAIEDVLDEAL
Ga0207662_1030101333300025918Switchgrass RhizosphereMAGGPASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALA
Ga0207646_1002146373300025922Corn, Switchgrass And Miscanthus RhizosphereLPLSEDDLQAMVLRATVALANPPGSIAPEPRPRRDVVEEAYEAVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV
Ga0207681_1009227323300025923Switchgrass RhizosphereMAGGPASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207659_1189561213300025926Miscanthus RhizosphereLPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207687_1189374223300025927Miscanthus RhizosphereMAGGPASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGS
Ga0207644_1027718413300025931Switchgrass RhizosphereRRRSARHTFFRTSHAVARRGPAPTLMAADSVSDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRGKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207709_1052311713300025935Miscanthus RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMRSAIEDVLDDSV
Ga0207670_1018155223300025936Switchgrass RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207669_1018407923300025937Miscanthus RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207689_1024623023300025942Miscanthus RhizosphereMAAGHVSPDDDNALPLSEDELQALVMRATVALANPPGSTVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207668_1155882723300025972Switchgrass RhizosphereQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207677_1014470233300026023Miscanthus RhizosphereHTFLRAGHAAARRGPAAALMAAGHVSPDDEDALPLSEDELQALVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDS
Ga0207703_1086062523300026035Switchgrass RhizosphereMAAGHVSPDDEDALPLSEDELQALVMRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLD
Ga0207703_1089746623300026035Switchgrass RhizosphereLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207678_1116531413300026067Corn RhizospherePALMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207708_1106370333300026075Corn, Switchgrass And Miscanthus RhizosphereMAAGHVSPDDDNALPLSEDELQALVMRATVALANPPGSTVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDS
Ga0207708_1106788613300026075Corn, Switchgrass And Miscanthus RhizosphereFLRARHAAARRGPPAALMAGGPASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRNVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207641_1005138543300026088Switchgrass RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207676_1011239623300026095Switchgrass RhizosphereMAAGHVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRGKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207675_10051981823300026118Switchgrass RhizosphereMASGSVPPDDDDALPLSEDELQALVMRATVALANPPGSIAPEPRPRRDLVEEAYDGVLRLVREVRRLRRRQDRARDALRHSLAVGDADSMKSAIEDVLDDSV
Ga0207675_10131607713300026118Switchgrass RhizosphereFLRARHAAARRGPPAALMAGGPASPDEEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207675_10172805313300026118Switchgrass RhizosphereLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0207683_1004124443300026121Miscanthus RhizosphereMAAGPVSPDDEDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0209240_109021723300026304Grasslands SoilMAADPVPSDDDDALPLSEDELEAMVLRATVALASPPGSVAPEPRPRRDVVEEAYEAVLRLVREVRRLRRRGDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV
Ga0209647_103014923300026319Grasslands SoilMAVDPVSSDEDDALPLSEDELQAMVLRATVALANPPGSNAPEPRPRRDVVEEAYDTVLRLVREVRRLRRREDRAKDALRTSLAVGDAGSMKSAIEDVLDDSV
Ga0209802_101929943300026328SoilMVGGPAAPEEDDAALPLTDDELQGIAVRATVARDTPPGSLPPDPRPRRDALEEAYDAVLRLVREVRRLRRRDDRAKGALRTALAEGDPAAMKRAIEDVLDDALCVRRG
Ga0209161_1009075023300026548SoilMAGDPRILDDEDALPLGEDELQVLAVRATVALATPPGSVPPDPRPRRDALEEAYEAVLRLVREVRRLRRRDERSRAALRASVSTGDPAAMRSAIEDLLDEAL
Ga0209488_1047185823300027903Vadose Zone SoilMAADPVSSDEDDALPLSEDELQAMVLRATVALANPPGSNAPEPRPRRDVVEEAYDTVLRLVREVRRLRRREDRAKDALRTSLAVGDADSMKSAMEDVLDDSV
Ga0209382_10001084393300027909Populus RhizosphereMSAGPVSPDDEDTLPLSEDELQALVLRATVALANPPGTSVPEPRPRRDLVEEAYDGVLRLVREVRRLRRREDRAKDALRHSLAVGDAESMKSAIEDVLDDSV
Ga0209382_1043617223300027909Populus RhizosphereMAADPVSDEEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDAIRNALAVGDAGSMKSAIEDVLDDSV
Ga0209382_1074532523300027909Populus RhizosphereMAADPSSADDDDALPLSEDELQAMVLRATVALANPPGSVAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRHALSVGDADSMKSAIEDVLDDGV
Ga0307282_1044674723300028784SoilMAAGPVSPDDDDALPLSEDELQALVLRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNSLAVGDADSMKSAIEDVLDDSV
Ga0307304_1040951823300028885SoilMAAGPVSPDDDDALPLSEDELQALVLRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNSLAVGDADSMKSAI
Ga0307304_1057519013300028885SoilMATGPVSPDDDDALPLSEDELQALVMRATVALANPPGSTAPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRHSLAVGDADSMKSAIEDVLDDSV
Ga0247827_1116643323300028889SoilDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0247826_1122001623300030336SoilMAAGPASPDEEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMRSAIEDVLDDSV
Ga0307468_10135079523300031740Hardwood Forest SoilMAAGSVSPDDDDALPLSEDELQAFVLRATVAVANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0310884_1027228423300031944SoilALPLREDELQALVLRATVAVANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0310897_1006751023300032003SoilRGPAAALMAAGHVSPDDEDALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDGVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDSV
Ga0310890_1023680623300032075SoilALPLSEDELQAFVLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMRSAIEDVLDDSV
Ga0247829_1179948823300033550SoilRHTFFRAGHAAARRGPAPALMAADPVSDEEDALPLSEDELQAFLLRATVALANPPGSAVPEPRPRRDVVEEAYDAVLRLVREVRRLRRREDRAKDALRNALAVGDAGSMKSAIEDVLDDS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.