Metagenome / Metatranscriptome Family F053918

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053918
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	87 residues
Representative Sequence	YGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT
Number of Associated Samples	108
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.43 %
% of genes near scaffold ends (potentially truncated)	99.29 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.143 % of family members)
Environment Ontology (ENVO)	Unclassified (38.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.83% β-sheet: 0.00% Coil/Unstructured: 52.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF04392	ABC_sub_bind	13.57
PF03401	TctC	8.57
PF04075	F420H2_quin_red	2.86
PF00072	Response_reg	2.14
PF06055	ExoD	1.43
PF00582	Usp	1.43
PF03992	ABM	1.43
PF00239	Resolvase	1.43
PF00723	Glyco_hydro_15	0.71
PF11994	DUF3489	0.71
PF08241	Methyltransf_11	0.71
PF02518	HATPase_c	0.71
PF00248	Aldo_ket_red	0.71
PF04389	Peptidase_M28	0.71
PF00872	Transposase_mut	0.71
PF08327	AHSA1	0.71
PF01558	POR	0.71
PF02826	2-Hacid_dh_C	0.71
PF00571	CBS	0.71
PF08281	Sigma70_r4_2	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	13.57
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	8.57
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.43
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.43
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	1.43
COG1014	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit	Energy production and conversion [C]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.57 %
Unclassified	root	N/A	16.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.57 %
Unclassified	root	N/A	16.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.57 %
Unclassified	root	N/A	16.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.43 %
Unclassified	root	N/A	16.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.71 %
Unclassified	root	N/A	16.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	42.14 %
Unclassified	root	N/A	16.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.43 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.43 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.14 %
Unclassified	root	N/A	16.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.71 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.71 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.71 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.71 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.14 %
Unclassified	root	N/A	16.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Pseudooceanicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola	0.71 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.71 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.14 %
Unclassified	root	N/A	16.43 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.43 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.71 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.71 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10007753	All Organisms → cellular organisms → Bacteria → Proteobacteria	2537	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10060109	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1008608	Not Available	1442	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1013406	Not Available	1389	Open in IMG/M
3300000955\|JGI1027J12803_105176211	Not Available	514	Open in IMG/M
3300004479\|Ga0062595_101757524	Not Available	587	Open in IMG/M
3300005177\|Ga0066690_10881692	Not Available	573	Open in IMG/M
3300005363\|Ga0008090_10150858	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300005434\|Ga0070709_10512757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300005457\|Ga0070662_101631492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005467\|Ga0070706_102042923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	519	Open in IMG/M
3300005713\|Ga0066905_101621772	Not Available	592	Open in IMG/M
3300005764\|Ga0066903_104609072	Not Available	734	Open in IMG/M
3300005764\|Ga0066903_107275888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300005764\|Ga0066903_108258630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300005764\|Ga0066903_108553382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300006028\|Ga0070717_11765328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300006034\|Ga0066656_11037013	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006049\|Ga0075417_10598576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300006797\|Ga0066659_10280874	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300006871\|Ga0075434_100655675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300006871\|Ga0075434_102204769	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300006903\|Ga0075426_10252759	Not Available	1284	Open in IMG/M
3300006969\|Ga0075419_11401300	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300007076\|Ga0075435_101340813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300007255\|Ga0099791_10648052	Not Available	518	Open in IMG/M
3300009098\|Ga0105245_11810663	Not Available	663	Open in IMG/M
3300009100\|Ga0075418_11826218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300009137\|Ga0066709_102474368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300009789\|Ga0126307_10643212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300009792\|Ga0126374_10857995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300010038\|Ga0126315_10129420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1478	Open in IMG/M
3300010046\|Ga0126384_11952037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300010046\|Ga0126384_12266418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300010047\|Ga0126382_10316292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1180	Open in IMG/M
3300010047\|Ga0126382_11190600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300010048\|Ga0126373_13308275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010358\|Ga0126370_11618582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300010358\|Ga0126370_12542846	Not Available	511	Open in IMG/M
3300010362\|Ga0126377_10069551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3127	Open in IMG/M
3300010366\|Ga0126379_10272489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1681	Open in IMG/M
3300010371\|Ga0134125_12162202	Not Available	605	Open in IMG/M
3300010376\|Ga0126381_101537213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	962	Open in IMG/M
3300010376\|Ga0126381_102994324	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010398\|Ga0126383_11597879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300010398\|Ga0126383_12850702	Not Available	565	Open in IMG/M
3300010398\|Ga0126383_13279087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300012199\|Ga0137383_10223826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1379	Open in IMG/M
3300012199\|Ga0137383_11028524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	599	Open in IMG/M
3300012201\|Ga0137365_10975406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300012202\|Ga0137363_10233628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1489	Open in IMG/M
3300012361\|Ga0137360_10065884	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300012362\|Ga0137361_11068615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300012582\|Ga0137358_10565223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300012582\|Ga0137358_11016741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300012923\|Ga0137359_11389454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300012927\|Ga0137416_11908416	Not Available	544	Open in IMG/M
3300012948\|Ga0126375_11569811	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012960\|Ga0164301_10083729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1775	Open in IMG/M
3300012971\|Ga0126369_11159326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300012985\|Ga0164308_11345471	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012986\|Ga0164304_11040564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300012986\|Ga0164304_11113344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	633	Open in IMG/M
3300012987\|Ga0164307_11435452	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300016294\|Ga0182041_10353586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1236	Open in IMG/M
3300016294\|Ga0182041_10489442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300016294\|Ga0182041_11605953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300016319\|Ga0182033_11392877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300016341\|Ga0182035_10016338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4490	Open in IMG/M
3300016341\|Ga0182035_10196677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1591	Open in IMG/M
3300016341\|Ga0182035_11445707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300016387\|Ga0182040_10988560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300016404\|Ga0182037_10907849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300016422\|Ga0182039_10113765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2026	Open in IMG/M
3300016422\|Ga0182039_10223650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1516	Open in IMG/M
3300020579\|Ga0210407_11178125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300021168\|Ga0210406_10406514	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300021178\|Ga0210408_10079835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2565	Open in IMG/M
3300021560\|Ga0126371_12487765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300024288\|Ga0179589_10546601	Not Available	540	Open in IMG/M
3300025906\|Ga0207699_10498874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300025915\|Ga0207693_10234604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1441	Open in IMG/M
3300025929\|Ga0207664_10788653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300026285\|Ga0209438_1213970	Not Available	517	Open in IMG/M
3300026325\|Ga0209152_10452715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300026550\|Ga0209474_10600154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300026551\|Ga0209648_10095077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2455	Open in IMG/M
3300026557\|Ga0179587_10826109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300027874\|Ga0209465_10377360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300027903\|Ga0209488_10588053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300027909\|Ga0209382_10343077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1675	Open in IMG/M
3300028881\|Ga0307277_10058354	Not Available	1582	Open in IMG/M
3300031544\|Ga0318534_10470246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	719	Open in IMG/M
3300031545\|Ga0318541_10057129	All Organisms → cellular organisms → Bacteria → Proteobacteria	2018	Open in IMG/M
3300031545\|Ga0318541_10445178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300031573\|Ga0310915_10058940	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300031573\|Ga0310915_10790976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300031680\|Ga0318574_10006546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5029	Open in IMG/M
3300031719\|Ga0306917_10194444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1532	Open in IMG/M
3300031719\|Ga0306917_11140892	Not Available	606	Open in IMG/M
3300031719\|Ga0306917_11210875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300031720\|Ga0307469_10889039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300031744\|Ga0306918_10269027	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300031770\|Ga0318521_10000690	All Organisms → cellular organisms → Bacteria → Proteobacteria	10086	Open in IMG/M
3300031781\|Ga0318547_10912137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300031792\|Ga0318529_10003574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5172	Open in IMG/M
3300031793\|Ga0318548_10115386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1295	Open in IMG/M
3300031805\|Ga0318497_10171132	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300031879\|Ga0306919_10374302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300031890\|Ga0306925_10235631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	1973	Open in IMG/M
3300031890\|Ga0306925_11463376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300031897\|Ga0318520_10683924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300031942\|Ga0310916_10582430	Not Available	951	Open in IMG/M
3300031945\|Ga0310913_10077034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2221	Open in IMG/M
3300031945\|Ga0310913_10253641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1236	Open in IMG/M
3300031945\|Ga0310913_10294437	Not Available	1144	Open in IMG/M
3300031954\|Ga0306926_10122349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3209	Open in IMG/M
3300031954\|Ga0306926_12087990	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031981\|Ga0318531_10508691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300032001\|Ga0306922_10470463	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300032001\|Ga0306922_10600080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1166	Open in IMG/M
3300032001\|Ga0306922_10875353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300032010\|Ga0318569_10341777	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300032035\|Ga0310911_10187081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1174	Open in IMG/M
3300032039\|Ga0318559_10525123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300032041\|Ga0318549_10007241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3710	Open in IMG/M
3300032042\|Ga0318545_10249215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300032051\|Ga0318532_10008262	All Organisms → cellular organisms → Bacteria → Proteobacteria	3124	Open in IMG/M
3300032054\|Ga0318570_10058453	All Organisms → cellular organisms → Bacteria → Proteobacteria	1617	Open in IMG/M
3300032059\|Ga0318533_10681408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300032064\|Ga0318510_10340627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300032068\|Ga0318553_10144897	Not Available	1228	Open in IMG/M
3300032076\|Ga0306924_12010383	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300032174\|Ga0307470_10323860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1056	Open in IMG/M
3300032180\|Ga0307471_102626029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300032180\|Ga0307471_102998349	Not Available	599	Open in IMG/M
3300032180\|Ga0307471_103414193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300032261\|Ga0306920_101224448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300032261\|Ga0306920_101699253	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300033290\|Ga0318519_10159768	Not Available	1265	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.86%
Host-Associated	Host-Associated	7.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.86%
Plants	Host-Associated → Plants	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.29%
Loam	Environmental → Terrestrial → Soil → Loam	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.14%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100077536	3300000793	Forest Soil	CSYGVGDDESYKRALTFLENCERYTLRSLVHRSAKHHAELTVDHAKRVLSRALKKLDTSQGHNPALRAMIVDLLKQEPLEANSQPSGNT*
AF_2010_repII_A001DRAFT_100601091	3300000793	Forest Soil	ALTFLENCERYTLRSLVRRSAKHHAEVTLDHAKRIFSRALKKLDTSQGHNPTLRAMIGAIGGK*
AP72_2010_repI_A100DRAFT_10086083	3300000837	Forest Soil	LYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
AP72_2010_repI_A001DRAFT_10134062	3300000893	Forest Soil	LLYQFLAAEIRALHCSYGVGDEESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
JGI1027J12803_1051762111	3300000955	Soil	NCERYTLRTLVRRSAKHHTEVTIDHAKRVFLRALTMLDSSQAHSSTLRAMMVHLLKQEPLQTDGGA*
Ga0062595_1017575242	3300004479	Soil	LTFLENCERYTLRSLVRRSAKHHAELTVDHSKRVFLRAIKMLDPQGHNPTLRAMILHLLKQEQLQTDTQASGRPKAAG*
Ga0066690_108816922	3300005177	Soil	LTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0008090_101508583	3300005363	Tropical Rainforest Soil	LAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEALEAISQPSGNT*
Ga0070709_105127572	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLEQEPLQTKSQPFGNA*
Ga0070662_1016314922	3300005457	Corn Rhizosphere	KSYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0070706_1020429232	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQQMVSHLGTLEAAG*
Ga0066905_1016217721	3300005713	Tropical Forest Soil	EESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMMVHLLKQEPLQTNSQIWERLKLPGDVESD*
Ga0066903_1046090721	3300005764	Tropical Forest Soil	LRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPILRAMIVHLLKQEPLQTNSQPSGNA*
Ga0066903_1072758882	3300005764	Tropical Forest Soil	FLAAEIRALHCSYGLGDGESYKRALTFLENCERYTLRTLVRRSAKHHTEVTIDHAKRVFLRALRMLDSSRGHSPTLRAMMVHLLKQEPLQTDRGA*
Ga0066903_1082586302	3300005764	Tropical Forest Soil	RALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKRHAEVTVDHARRVFSRALKKLDTSQGHNPTLRAMMMYLLKQEPLEANSQPFGST*
Ga0066903_1085533822	3300005764	Tropical Forest Soil	FLAAEIRALHCSYGLGDGESYKRALTFLENCERYTLRTLVSRSAKHHTELTIDHAKRVFLRALTMLDSSQGHSSTLRAMMVHLLKQEPLQTDGGA*
Ga0070717_117653281	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
Ga0066656_110370131	3300006034	Soil	SAKHHAEVTVDHAKRVFSRALKKLETAQGHNPTLRAMIVHLLEQEPPQTKVSHLETLEVAG*
Ga0075417_105985762	3300006049	Populus Rhizosphere	ESYKRALTFLENCERYTLRSLVRRSAEHRAAVTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0066659_102808741	3300006797	Soil	LAAEIRALHLSYGVGDGESYKRALTFLENCERFTLRSLVRRSAEHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQERLQTKVSHLATLEAAG*
Ga0075434_1006556751	3300006871	Populus Rhizosphere	LYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLNTSQGRNPNLRAMIMYFFKQEPLDPNSQPSWNT*
Ga0075434_1022047691	3300006871	Populus Rhizosphere	ENCERYTLRSLVRRSAKLHAEVTVDHAKRVFSRALKKLETAQGHNPTVRAMIVHLLKQEPPQQMVSHLETLEAAGDELKRD*
Ga0075426_102527592	3300006903	Populus Rhizosphere	LAAEIRALHCSYGVGDDESYKRALGFLENCERYTLRSLVRRSAKHHAEITVDHAKRVFLRALEKLDSSHGHNPTVRAMIMYSDSPGAC*
Ga0075419_114013002	3300006969	Populus Rhizosphere	HCSYGVGDGESYKKALTFLENCERYTLRSLVRTSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMMVYLLKQEPLEANSQPSGNT*
Ga0075435_1013408131	3300007076	Populus Rhizosphere	SYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0099791_106480522	3300007255	Vadose Zone Soil	TFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNT*
Ga0105245_118106632	3300009098	Miscanthus Rhizosphere	VVEFTVESYKRAQTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0075418_118262181	3300009100	Populus Rhizosphere	HSSYGIGDEESYKRAQTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMMVHLLEQEPLQTNSQPSGNT*
Ga0066709_1024743681	3300009137	Grasslands Soil	DGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0126307_106432122	3300009789	Serpentine Soil	CSYGVGDGESYKRALTFLENCERFTLRSLVRKSAKHHVEVTVDHAKEVFSHAIKKLDTSQGNDPTLRAMIVFLPKEEPLQANSQSSRKA*
Ga0126374_108579951	3300009792	Tropical Forest Soil	LLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKQHAEVTVDHARRVFSRALKKLNTSRDHNAALRAMIAHLLKQEPLQTNSQSSETFEAAG*
Ga0126315_101294201	3300010038	Serpentine Soil	AESYKRALTFLQNCERFTLRSLVRKSAKHHAEVTVDHAKRVFSRALNKLDTSRGHDPTLRAMIVCLLKEEPLQANSQPSGKA*
Ga0126384_119520373	3300010046	Tropical Forest Soil	LYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
Ga0126384_122664181	3300010046	Tropical Forest Soil	YGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT*
Ga0126382_103162921	3300010047	Tropical Forest Soil	LAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNATLRAMIVYLLKQEPLEANSQPSGNT*
Ga0126382_111906001	3300010047	Tropical Forest Soil	GDDESYKRALTFLENCERYTLRSLVRRSAQHHAEVTVDHAKRIFSRALKKLDISQGHNPTLRALIVYLLKHEPLEANSQPSGNT*
Ga0126373_133082751	3300010048	Tropical Forest Soil	YQFLAAEIRALHCSYGVGDGESYKRALTFLKNCERYALRSLVRRSAKHHAEMTVAHAKRVFSRALKKLDTSQGHDPTLRGMIVHLLKQEPLQTNG*
Ga0126370_116185821	3300010358	Tropical Forest Soil	DGESYKKALTFLENCERYTLRSLVRRSAKRHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIGHMLKYSP*
Ga0126370_125428461	3300010358	Tropical Forest Soil	RALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMIVYSLKQEPLEANSQPSGNT*
Ga0126377_100695517	3300010362	Tropical Forest Soil	GESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTPQGHNPTLRAMIVHWLKQEPLQTNSQPSGNN*
Ga0126379_102724891	3300010366	Tropical Forest Soil	ESYKRALTFLENCERHTLRTLVRRSAKHHTEVTIDHAKRVFLRALRMLDSSQGHSPTLRAMMVHLLKQEPLQTDRGA*
Ga0134125_121622022	3300010371	Terrestrial Soil	KRALTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0126381_1015372131	3300010376	Tropical Forest Soil	DDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDISQGHNPTLRAMMVYLLKQEASEGNSRPSGNT*
Ga0126381_1029943241	3300010376	Tropical Forest Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT*
Ga0126383_115978791	3300010398	Tropical Forest Soil	EIRALHCSYGLGDDESYKRALTFLENCERYTLRSLVRRSAQHHAEVTVDHAKRIFSRALKKLDISQGHNPTLRALIVYLLKHEPLEANSQPSGNT*
Ga0126383_128507021	3300010398	Tropical Forest Soil	LHCSYGLGDDESYKRALRFLENCERYTLRNLVRRSAKHHAEVTVDHAKRVFSRALDKLDSSQGHNPTLRAMIVYLLKEEPLEANSQSSGNS*
Ga0126383_132790871	3300010398	Tropical Forest Soil	DESYKRALTFLENCERYTLRSLVRRSTKHHAKVTVDHAKRIFSRALKKLDTSQGHNPTLRALIAYLSKREPLETNSQLSGNTL*
Ga0137383_102238261	3300012199	Vadose Zone Soil	YQFLAAEIRALHLSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQPSGNA*
Ga0137383_110285241	3300012199	Vadose Zone Soil	ESYKRALTFLENCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG*
Ga0137365_109754062	3300012201	Vadose Zone Soil	LAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLQAMIVHLLNQEPLQTNSQPSGNA*
Ga0137363_102336282	3300012202	Vadose Zone Soil	ILLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG*
Ga0137360_100658841	3300012361	Vadose Zone Soil	GESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRGFSRALKKLDTSQGHNPTLRAIIVHVLKQEPLKSPLF*
Ga0137361_110686151	3300012362	Vadose Zone Soil	RALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0137358_105652231	3300012582	Vadose Zone Soil	LYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQ
Ga0137358_110167411	3300012582	Vadose Zone Soil	IRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRAFKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0137359_113894542	3300012923	Vadose Zone Soil	YQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRAFKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0137416_119084162	3300012927	Vadose Zone Soil	TFLENCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG*
Ga0126375_115698112	3300012948	Tropical Forest Soil	GDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTPQGHNPTLRAMIVHWLKQEPLQTNSQPSGNN*
Ga0164301_100837293	3300012960	Soil	YTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLEQEPLQTNSQPSGNT*
Ga0126369_111593262	3300012971	Tropical Forest Soil	SYGVGDDESYKRALTFLENCERYTLRSLVRRSAKRHAEVTVDHARRVFSRALKKLDTSQGHNPTLRAMMMYLLKQEPLEANSQPFGST*
Ga0164308_113454711	3300012985	Soil	YTLRSLVRRSAEHRAAVTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0164304_110405641	3300012986	Soil	YQFLAAEIRALHCSYGLGDGESYKRALKFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0164304_111133441	3300012986	Soil	RALTFLENCERYTLRSLVRRSAKHHAEITVDHAKRVFLRALEKLDSSQGHNPTVQAMIMYLLKEEPLEANSQLSGNT*
Ga0164307_114354522	3300012987	Soil	SYKRAQTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0182041_103535861	3300016294	Soil	YGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0182041_104894423	3300016294	Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLG
Ga0182041_116059531	3300016294	Soil	EIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0182033_113928772	3300016319	Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAERVFSRALKKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLG
Ga0182035_100163381	3300016341	Soil	LLYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0182035_101966774	3300016341	Soil	QFLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0182035_114457072	3300016341	Soil	LHCSYGVGDEESYKRALTFLENCERYTLRSLVRRPAKHHAEVTVDRAKRVFSRALKKLDTSQGHNPTLRAMIMHLLKQEPLHTNSQPSGNA
Ga0182040_109885602	3300016387	Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDISQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0182037_109078491	3300016404	Soil	NRRIRILLYQFLAAEIRALHCSYGVGDGESYKSALTFLKNCERYTLRSLVRRSAKHHAEMTFDHAKRVFSRALKKLDTSQGHDPALRAMIVHLLKQEPADK
Ga0182039_101137654	3300016422	Soil	HCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0182039_102236501	3300016422	Soil	KRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0210407_111781251	3300020579	Soil	ALHCSYGFGDVESYKRALTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV
Ga0210406_104065141	3300021168	Soil	ILLYQFLAAEIRALHLSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLRTNSQPSGNA
Ga0210408_100798351	3300021178	Soil	ALHCSYGVGDGESYKRALKFLEDCERYTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDTSQGQNEALRAMILHLMEQEPLQTNSQPRSPRS
Ga0126371_124877652	3300021560	Tropical Forest Soil	ILLYQFLAAEIRALHCSYGVGDDESYKRARTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT
Ga0179589_105466011	3300024288	Vadose Zone Soil	NCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG
Ga0207699_104988741	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TKEHTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMMVHLLEQEPLQTNSQPSGNT
Ga0207693_102346041	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ALHCSYGLGDGKSYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNGHGS
Ga0207664_107886533	3300025929	Agricultural Soil	KEHTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMMVHLLEQEPLQTNSQPSGNT
Ga0209438_12139702	3300026285	Grasslands Soil	TLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG
Ga0209152_104527151	3300026325	Soil	YQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVQLLKQEPLQTNGQPSGNA
Ga0209474_106001541	3300026550	Soil	ESYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA
Ga0209648_100950773	3300026551	Grasslands Soil	ENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMTVHLLKQEPLKSPLF
Ga0179587_108261091	3300026557	Vadose Zone Soil	LLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALEKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF
Ga0209465_103773602	3300027874	Tropical Forest Soil	FLAAEIRALHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLQAMIMHLLRQEPLQTNSQPSGNA
Ga0209488_105880532	3300027903	Vadose Zone Soil	LHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMTVHLLKQEPLKSPLF
Ga0209382_103430773	3300027909	Populus Rhizosphere	NRILLYRFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKYHAEMTVDHAKRIFSRALKKLDTSRGDNPTLRAMIVHLLQQEPLQTGNT
Ga0307277_100583542	3300028881	Soil	QFLPAEIRALHCSYGLGDGESYKRALTFLENCERYTLRSLVRRSAKHHAELTVDHSKRVFLRAIKMLDPQGHNPTLRAMILHLLKQEQLQTDTQASGKA
Ga0318534_104702461	3300031544	Soil	LYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLARRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318541_100571291	3300031545	Soil	NCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318541_104451782	3300031545	Soil	SYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0310915_100589401	3300031573	Soil	QFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLARRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0310915_107909762	3300031573	Soil	LTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0318574_100065468	3300031680	Soil	ENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0306917_101944441	3300031719	Soil	ILLYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0306917_111408923	3300031719	Soil	SYKRALTFLENCERFTLRSLVRRSAKHNAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQPSGNA
Ga0306917_112108752	3300031719	Soil	LYQFLAAEIRALHCSYGLGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0307469_108890393	3300031720	Hardwood Forest Soil	YQFLAAEIRALHCSYGVGDDESYKRALGLLENCERYTLRSLVRRSAKHHAEITVDHAKRVFLRALEKLDSSQGHNPTVQAMIMYLLKEEPLEANSQLSGNT
Ga0306918_102690271	3300031744	Soil	IRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0318521_100006901	3300031770	Soil	LTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318547_109121371	3300031781	Soil	IRALHCSYGLGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0318529_100035748	3300031792	Soil	ILLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318548_101153861	3300031793	Soil	YQFLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0318497_101711321	3300031805	Soil	AEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0306919_103743023	3300031879	Soil	SYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0306925_102356314	3300031890	Soil	EIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0306925_114633761	3300031890	Soil	DDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0318520_106839241	3300031897	Soil	GVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEANSQPSVNT
Ga0310916_105824303	3300031942	Soil	LSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQPSGNA
Ga0310913_100770341	3300031945	Soil	DESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAERVFSRALKKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0310913_102536413	3300031945	Soil	LAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0310913_102944371	3300031945	Soil	GLGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0306926_101223495	3300031954	Soil	SYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEVNSQRSGNT
Ga0306926_120879901	3300031954	Soil	RALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0318531_105086911	3300031981	Soil	SYGVGDEESYKRALTFLENCERYTLRSLVRRPAKHHAEVTVDRAKRVFSRALKKLDTSQGHNPTLRAMIMHLLKQEPLHTNSQPSGNA
Ga0306922_104704631	3300032001	Soil	QFLAAEIRALHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0306922_106000801	3300032001	Soil	VGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0306922_108753531	3300032001	Soil	CSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0318569_103417772	3300032010	Soil	LLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0310911_101870813	3300032035	Soil	FLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0318559_105251231	3300032039	Soil	ILLYQFLAAEIRALHCSYGVGDGESYKSALTFLKNCERYTLRSLVRRSAKHHAEMTFDHAKRVFSRALKKLDTSQGHDPALRAMIVHLLKQEPADK
Ga0318549_100072416	3300032041	Soil	CERYTLRSLARGSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318545_102492151	3300032042	Soil	RILLYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLARRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318532_100082621	3300032051	Soil	YKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318570_100584531	3300032054	Soil	RYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318533_106814081	3300032059	Soil	LHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0318510_103406273	3300032064	Soil	FLAAEIRALHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEVNSQRSGNT
Ga0318553_101448974	3300032068	Soil	YGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0306924_120103832	3300032076	Soil	LTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0307470_103238601	3300032174	Hardwood Forest Soil	ALHCSYGIGDEESYKRAQTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLEQEPLQTNSQPSGNT
Ga0307471_1026260291	3300032180	Hardwood Forest Soil	YKRAQTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLEQEPLQTNSQPSGNT
Ga0307471_1029983491	3300032180	Hardwood Forest Soil	ERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLQAMIVYLWKQEPLEVNSQPSGNT
Ga0307471_1034141931	3300032180	Hardwood Forest Soil	AAEIRALHCSYGIGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTPQGDNPTLRAMIVHLLKHEPLQTNSQPSGNT
Ga0306920_1012244483	3300032261	Soil	RALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0306920_1016992533	3300032261	Soil	LHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318519_101597682	3300033290	Soil	DESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053918

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences