Metagenome / Metatranscriptome Family F053892

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053892
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	82 residues
Representative Sequence	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVGSTGESADDWLIR
Number of Associated Samples	122
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.27 %
% of genes near scaffold ends (potentially truncated)	91.43 %
% of genes from short scaffolds (< 2000 bps)	87.86 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (29.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.47% β-sheet: 20.75% Coil/Unstructured: 53.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
c.119.1.0: DAK1/DegV-like	d3nyia_	3nyi	0.65
c.119.1.0: DAK1/DegV-like	d3nyia_	3nyi	0.65
c.41.1.1: Subtilisin-like	d6u26b1	6u26	0.63
c.41.1.1: Subtilisin-like	d6u26b1	6u26	0.63
c.119.1.1: DAK1/DegV-like	d1mgpa1	1mgp	0.62
c.2.1.2: NAD(P)-binding Rossmann-fold domains	d1xg5a1	1xg5	0.62
c.119.1.0: DAK1/DegV-like	d4x9xa_	4x9x	0.62
c.119.1.1: DAK1/DegV-like	d1mgpa1	1mgp	0.62
c.2.1.2: NAD(P)-binding Rossmann-fold domains	d1xg5a1	1xg5	0.62
c.119.1.0: DAK1/DegV-like	d4x9xa_	4x9x	0.62

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00290	Trp_syntA	60.00
PF08240	ADH_N	22.14
PF00291	PALP	4.29
PF13602	ADH_zinc_N_2	2.86
PF13649	Methyltransf_25	1.43
PF02687	FtsX	0.71
PF02585	PIG-L	0.71
PF00697	PRAI	0.71
PF13539	Peptidase_M15_4	0.71
PF00108	Thiolase_N	0.71
PF13205	Big_5	0.71
PF05991	NYN_YacP	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0159	Tryptophan synthase alpha chain	Amino acid transport and metabolism [E]	60.00
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	0.71
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.71
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.71
COG3688	EndoRNase involved in mRNA decay, NYN (Nedd4-BP1/Rae1/YacP nuclease) family, contains PIN domain	Translation, ribosomal structure and biogenesis [J]	0.71

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.86 %
Unclassified	root	N/A	22.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.86 %
Unclassified	root	N/A	22.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.86 %
Unclassified	root	N/A	22.14 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.57 %
Unclassified	root	N/A	22.14 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.86 %
Unclassified	root	N/A	22.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	42.14 %
Unclassified	root	N/A	22.14 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	42.14 %
Unclassified	root	N/A	22.14 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	4.29 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.14 %
Unclassified	root	N/A	22.14 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	4.29 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.14 %
Unclassified	root	N/A	22.14 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	4.29 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2227621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300000156\|NODE_c0742642	All Organisms → cellular organisms → Bacteria	15899	Open in IMG/M
3300000890\|JGI11643J12802_11446191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	876	Open in IMG/M
3300000891\|JGI10214J12806_10211725	Not Available	1090	Open in IMG/M
3300000956\|JGI10216J12902_109249027	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300001534\|A15PFW1_10719261	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300001536\|A1565W1_10133109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300004006\|Ga0055453_10207264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300004114\|Ga0062593_100049827	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
3300004156\|Ga0062589_101165430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300004463\|Ga0063356_101631343	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300004479\|Ga0062595_100492224	Not Available	917	Open in IMG/M
3300004480\|Ga0062592_101879341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300004643\|Ga0062591_102287390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300005093\|Ga0062594_103073346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005341\|Ga0070691_10733587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300005437\|Ga0070710_10056219	All Organisms → cellular organisms → Bacteria	2226	Open in IMG/M
3300005438\|Ga0070701_10621106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005439\|Ga0070711_100245643	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300005450\|Ga0066682_10951069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005455\|Ga0070663_101402012	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005457\|Ga0070662_100040142	All Organisms → cellular organisms → Bacteria	3331	Open in IMG/M
3300005466\|Ga0070685_10722518	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005526\|Ga0073909_10205391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300005535\|Ga0070684_100822384	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005536\|Ga0070697_102034773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300005552\|Ga0066701_10668590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300005618\|Ga0068864_102590000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300005718\|Ga0068866_11080596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300005764\|Ga0066903_102315415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300006034\|Ga0066656_10979697	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300006804\|Ga0079221_11021005	Not Available	623	Open in IMG/M
3300006847\|Ga0075431_101272927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300006852\|Ga0075433_11614923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300006854\|Ga0075425_100969155	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300006914\|Ga0075436_101481785	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006954\|Ga0079219_10421958	Not Available	895	Open in IMG/M
3300006954\|Ga0079219_11620875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300009147\|Ga0114129_10719970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1281	Open in IMG/M
3300009156\|Ga0111538_13212255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300009162\|Ga0075423_11776090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300009162\|Ga0075423_13103066	Not Available	509	Open in IMG/M
3300009177\|Ga0105248_12090513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300009840\|Ga0126313_10128517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1893	Open in IMG/M
3300010036\|Ga0126305_10974444	Not Available	581	Open in IMG/M
3300010039\|Ga0126309_10083960	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300010042\|Ga0126314_10028555	All Organisms → cellular organisms → Bacteria	3469	Open in IMG/M
3300010042\|Ga0126314_10084574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2132	Open in IMG/M
3300010047\|Ga0126382_12171756	Not Available	533	Open in IMG/M
3300010359\|Ga0126376_11285655	Not Available	751	Open in IMG/M
3300010373\|Ga0134128_10788654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
3300011000\|Ga0138513_100072582	Not Available	531	Open in IMG/M
3300011107\|Ga0151490_1258296	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300011107\|Ga0151490_1336390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	550	Open in IMG/M
3300012200\|Ga0137382_10385999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300012200\|Ga0137382_10436696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300012201\|Ga0137365_10229613	Not Available	1383	Open in IMG/M
3300012204\|Ga0137374_11043513	Not Available	587	Open in IMG/M
3300012350\|Ga0137372_10035436	All Organisms → cellular organisms → Bacteria	4538	Open in IMG/M
3300012350\|Ga0137372_10159825	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300012354\|Ga0137366_10182576	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300012505\|Ga0157339_1058454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300012896\|Ga0157303_10023126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1073	Open in IMG/M
3300012907\|Ga0157283_10058927	Not Available	909	Open in IMG/M
3300012907\|Ga0157283_10403908	Not Available	509	Open in IMG/M
3300012948\|Ga0126375_10031476	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300012955\|Ga0164298_10668047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300012958\|Ga0164299_11281227	Not Available	559	Open in IMG/M
3300012960\|Ga0164301_10568248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300012984\|Ga0164309_10426243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300012986\|Ga0164304_11640803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300013297\|Ga0157378_11683854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300013306\|Ga0163162_10493161	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300013306\|Ga0163162_10741747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1102	Open in IMG/M
3300015371\|Ga0132258_12418090	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300015372\|Ga0132256_100891649	Not Available	1005	Open in IMG/M
3300015374\|Ga0132255_100058553	All Organisms → cellular organisms → Bacteria	5062	Open in IMG/M
3300015374\|Ga0132255_105581687	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	532	Open in IMG/M
3300017947\|Ga0187785_10100395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1157	Open in IMG/M
3300017966\|Ga0187776_10020274	All Organisms → cellular organisms → Bacteria	3636	Open in IMG/M
3300018027\|Ga0184605_10506638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300018032\|Ga0187788_10263005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300018064\|Ga0187773_10900349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	571	Open in IMG/M
3300018071\|Ga0184618_10028394	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300019361\|Ga0173482_10055623	Not Available	1302	Open in IMG/M
3300019867\|Ga0193704_1083330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300019875\|Ga0193701_1029871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300021080\|Ga0210382_10206472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300022694\|Ga0222623_10214427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300022756\|Ga0222622_10110288	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300022756\|Ga0222622_10549076	Not Available	830	Open in IMG/M
3300022886\|Ga0247746_1094908	Not Available	725	Open in IMG/M
3300024245\|Ga0247677_1026684	Not Available	828	Open in IMG/M
3300024246\|Ga0247680_1008096	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300024251\|Ga0247679_1030492	Not Available	909	Open in IMG/M
3300024287\|Ga0247690_1011148	Not Available	1024	Open in IMG/M
3300025915\|Ga0207693_10070008	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300025929\|Ga0207664_11537408	Not Available	587	Open in IMG/M
3300025930\|Ga0207701_11398634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300025944\|Ga0207661_10661613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300026078\|Ga0207702_10476835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1214	Open in IMG/M
3300026550\|Ga0209474_10005033	All Organisms → cellular organisms → Bacteria	11305	Open in IMG/M
3300027821\|Ga0209811_10288064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300028072\|Ga0247675_1019124	Not Available	981	Open in IMG/M
3300028381\|Ga0268264_12161827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300028589\|Ga0247818_10665737	Not Available	720	Open in IMG/M
3300028711\|Ga0307293_10082408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1016	Open in IMG/M
3300028716\|Ga0307311_10095089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300028718\|Ga0307307_10167973	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300028720\|Ga0307317_10020248	All Organisms → cellular organisms → Bacteria	2031	Open in IMG/M
3300028768\|Ga0307280_10394716	Not Available	515	Open in IMG/M
3300028778\|Ga0307288_10155901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300028793\|Ga0307299_10023837	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300028796\|Ga0307287_10209612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300028799\|Ga0307284_10152505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300028799\|Ga0307284_10366838	Not Available	584	Open in IMG/M
3300028807\|Ga0307305_10222548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300028811\|Ga0307292_10055318	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300028811\|Ga0307292_10163876	Not Available	903	Open in IMG/M
3300028811\|Ga0307292_10370931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300028812\|Ga0247825_10501064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300028812\|Ga0247825_10862235	Not Available	655	Open in IMG/M
3300028814\|Ga0307302_10090670	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300028819\|Ga0307296_10055219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2100	Open in IMG/M
3300028828\|Ga0307312_10000898	All Organisms → cellular organisms → Bacteria	14787	Open in IMG/M
3300028875\|Ga0307289_10393158	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300028878\|Ga0307278_10101270	Not Available	1295	Open in IMG/M
3300028881\|Ga0307277_10147749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300028881\|Ga0307277_10297935	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300028889\|Ga0247827_10589504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300031720\|Ga0307469_11244640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300031820\|Ga0307473_11011306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300031939\|Ga0308174_11739141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300031996\|Ga0308176_10240558	All Organisms → cellular organisms → Bacteria → Proteobacteria	1729	Open in IMG/M
3300031996\|Ga0308176_12397242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300032770\|Ga0335085_11882740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300033502\|Ga0326731_1148346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300033551\|Ga0247830_10410398	Not Available	1055	Open in IMG/M
3300033551\|Ga0247830_10450722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.14%
Host-Associated	Host-Associated	17.14%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.14%
Plants	Host-Associated → Plants	17.14%
Aquatic	Environmental → Aquatic	5.00%
Solid Waste	Engineered → Solid Waste	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.86%
Sediment	Environmental → Aquatic → Sediment	3.57%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Marine	Environmental → Aquatic → Marine	0.71%
Peat	Environmental → Terrestrial → Peat	0.71%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.71%
Grass	Engineered → Solid Waste → Grass	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.29%
Loam	Environmental → Terrestrial → Soil → Loam	7.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.71%
Composting	Engineered → Solid Waste → Grass → Composting	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.71%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.43%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.43%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.43%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.71%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_22276212	3300000033	Soil	IVLIDARNVQRSQWPNVPDEELVERVRAWAXRNGKRIVLVFDGKAPGGIVGATELDERTTLVGSSGESADDWLIREAPQYPGAWLVTSD
NODE_074264211	3300000156	Sugar Cane Bagasse Incubating Bioreactor	VADETTVLVDARNVLRSQWPNVPEGELVERARAWAERHSRPLVLVFDGRAPGGIVGEERLDDRTTLVGSGGG
JGI11643J12802_114461911	3300000890	Soil	MTVLVDARNVLRSQWPNLPEEELVALASAWARRNRHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIREAPGYPDAWLVTSDRALRDAAG
JGI10214J12806_102117251	3300000891	Soil	MSEATVLIDARNVQRSQWPNMADEELVDRSRAWAEENDNHVVLVFDGRAPGGVVGTTELDERTTLVGSGGESADEWLIR
JGI10216J12902_1092490272	3300000956	Soil	VLRSCWPNVPENELVERARAWAEQNARRVVLVFDGKAPGGIVGSERLDDRTTLVGSGGESADDWLIREAPARPGA
A15PFW1_107192612	3300001534	Permafrost	VSDTTVLIDARNVQRSKWPNLSDEELVERARAWAGRNGKRVVLVFDGKAPDGIAGTKELDARTTLVGAGGESADDWLIREAXXXXSFLRELEG*
A1565W1_101331091	3300001536	Permafrost	MPRVAHRSVGKARPVSDTTVLIDARNVQRSKWPNLSDEELVERARAWAGRNGKRVVLVFDGKAPDGIAGTKELDARTTLVGAGGESADDWL
Ga0055453_102072641	3300004006	Natural And Restored Wetlands	MTTVLVDARNVQRSQWPNVADDELVERARAWADRHDAELVLVFDGQALGEVGPQRLDERTTL
Ga0062593_1000498273	3300004114	Soil	MSEATVLIDARNVQRSQWPNMADEELVDRSRAWAEENDNHVVLVFDGRAPGGVVGTTELDERTTLVGSGGESADEWLIREAPHYESPWLVTSDRALRAAVGDAQRVIGGGSFLRELSE*
Ga0062589_1011654302	3300004156	Soil	MSEATVLIDARNVQRSQWPNMADEELVDRSRAWAEENDNHVVLVFDGRAPGGVVGTTELDERTTLVGSG
Ga0063356_1016313431	3300004463	Arabidopsis Thaliana Rhizosphere	MSEATVLIDARNVQRSQWPNMADEELVDRSRAWAEENDNHVVLVFDGRAPGGVVGTTELDERTTLVGSGGESADEWLIREAPHYESPWLVTSDRALRAAVGDAQR
Ga0062595_1004922242	3300004479	Soil	VTEKTTVLVDARNVQRSQWPNLPDEELVERAHAWAERHDAEAILVFDGRAPGGVVGERRVDARTTVVGTGGESADDWLTREAPSHQGA
Ga0062592_1018793412	3300004480	Soil	VSDATVLIDARNVQRSQWPNMAEDELVDRSRAWAEENDNHVVLVFDGRAPGGVVGTTELDERTTLVGS
Ga0062591_1022873902	3300004643	Soil	VSDATVLIDARNVQRSQWPNMAEDELVDRSRAWAEENDNHVVLVFDGRAPGGVVGTTELDERTTLVGSGGESADEWLIREAPHYESPWLV
Ga0062594_1030733461	3300005093	Soil	VSLVFVDGRNVQRSQWPNLGDEQLLERARAWAERQGHELVVVFDGETGGLVGEERLDERTTLVGTGRESADDWL
Ga0070691_107335871	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSRVFVDGRNVQRSQWPNLSDEQLVARASAWAERNGHELVVVFDGETGGLVGEERLDERTTLVGTGRESADD
Ga0070710_100562194	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VLVFVDANNVRRSRWPNLGDEELVERVRAWAERHDHESVIVFDRTAPGGIVGTERLDGRTTLVGSGPESADEWLIGEVPAHPGAWLVTSDRDLREAAG
Ga0070701_106211062	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGHESADEWL
Ga0070711_1002456433	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSERLDERTTLVGSGPESADE
Ga0066682_109510691	3300005450	Soil	VATVLVDARNVLRSQWPNVPERELVRRALDWAERHDHELVLVFDGEAPGGVTGTQRLDDRTLLVGSGAESAD
Ga0070663_1014020121	3300005455	Corn Rhizosphere	MSLVFVDGRNVQRSQWPNLSDEQLVERARAWAERNGHDLVVVFDGDMGGLVGEERLDERTTLVGTGRESADDWLIREVPNRPGAWLVTSDRALR
Ga0070662_1000401424	3300005457	Corn Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGSESADEWLIR
Ga0070685_107225181	3300005466	Switchgrass Rhizosphere	MSLVFVDGRNVQRSQWPNLSDEQLVERARAWAERNGHDLVVVFDGDMGGLVGEERLDERTTLVGTGRESADDWLIREVPNRPGA
Ga0073909_102053912	3300005526	Surface Soil	MTTVLVDARNVQRSQWPNVPDGELVERARGWADRHDAKLVLVFDGKAPDAGVGSKRLDERTTVVGTGGESAD
Ga0070684_1008223842	3300005535	Corn Rhizosphere	MSLVFVDGRNVQRSQWPNLSDEQLVERARAWAERNGHDLVVVFDGDMGGLVGEERLDERTTLVGTGRESADDWLIRE
Ga0070697_1020347731	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGSESADEWLIRE
Ga0066701_106685901	3300005552	Soil	VATVLIDARNVLRSQWPNVPERELVRRALDWAERHGHELVLVFDGKAPGAVTGAQRLDERTLLVGS
Ga0068864_1025900002	3300005618	Switchgrass Rhizosphere	LSRVFVDGRNVQRSRWPNLSDEQLVERARAWAERNAHELVVVFDGETGGLVGEERLDERTTLVGTGRESADDWLIRELP
Ga0068866_110805962	3300005718	Miscanthus Rhizosphere	VSRVFVDGRNVQRSQWPNLSDEQLVARASAWAERNRHELVVVFDGETGGLVGEERLDDWTTLVGTGLESADDWLIREVPNH
Ga0066903_1023154152	3300005764	Tropical Forest Soil	VLVFVDANNVRRSQWPNLTDEELVARTRDWAERYDHELVVVFDHRAPGGVEGVERLDGRTTLVGSGPESADDWLIGEVPAHPGAWLVTSDAHCARPPAEAQHA*
Ga0066656_109796972	3300006034	Soil	VATVLIDARNVLRSQWPNVPEHQLVRRALDWAQRHDHELVLVFDGKAPGAVTGTQRLDERTLLVGSGAESADDWLIRE
Ga0079221_110210052	3300006804	Agricultural Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAGRHEHESVIVFDRTAPGGIVGSERLDERTTLVGSGS
Ga0075431_1012729272	3300006847	Populus Rhizosphere	MTTVLVDARNVQRSQWPNLSDEELVERARAWADRHDAELVLVFDGKAPDAGIGTKRLDDGTTLVGTGGESADDWLI
Ga0075433_116149231	3300006852	Populus Rhizosphere	MSDATVLIDARNVQRSQWPNIPDDELVDRSRAWAEEHDNHVVLVFDGRAPGGVVGTTDLDERTTLVGCGGESADEWLIREAPRY
Ga0075425_1009691551	3300006854	Populus Rhizosphere	VSRVFVDGRNVQRSQWPNLSDEQLLERARAWAERHGHELVVVFDGEAGGLVGEERLDERTTLVGTGLESA
Ga0075436_1014817852	3300006914	Populus Rhizosphere	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSKRLDERTTLVGSGSESADEWLIGEVPAH
Ga0079219_104219581	3300006954	Agricultural Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSKRLDERTTLVGS
Ga0079219_116208752	3300006954	Agricultural Soil	VSLVFVDGRNVQRSQWPNLSDEQLLERARAWAERHGHELVLVFDGETGGLVGEERLDERTTLVGTGRESADDWLIREVPNHPGAWLVTSDRAL
Ga0114129_107199702	3300009147	Populus Rhizosphere	MTVLVDARNVLRSQWPNLPEEELVALASEWARRNGHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIREAPGYPDAWLVTSDRALRDAA
Ga0111538_132122551	3300009156	Populus Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAQEHDNHVVLVFDGRAPGGVVGTTDLDERTTLVGCGGESADEWLI
Ga0075423_117760901	3300009162	Populus Rhizosphere	MSEATVLIDARNVQRSHWPNMPDEELVDRSRAWAQEHDNHVVLVFDGRAPGGVIGTTKLDERTTLVGSGG
Ga0075423_131030661	3300009162	Populus Rhizosphere	MSEATVLIDARNVQRSQWPNMADEELVDRSRAWAEENDNHVVLVFDGRAPGGVVGTTELDERTTLVGSGGESADEWLIREAPHYESPWLVTSDRALRAAVGEAQRVIGGGSFLRELSA*
Ga0105248_120905132	3300009177	Switchgrass Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGHESA
Ga0126313_101285174	3300009840	Serpentine Soil	MSDITVLIDARNVQRSQWPNLSDEELVERTRNWAEQNDKRLVLVFDGRAPGGIVGATELDERTTLVGSRGESADDWLIREAPHYPGPGSSPRTGRCARPQGARPSA*
Ga0126305_109744442	3300010036	Serpentine Soil	VAEKTTVLVDARNVLRSQWPNLPEEELVAQASEWALRNGHEVVLVFDGKAPGGIVGTERHDPTTTLVGTGGETADDWL
Ga0126309_100839601	3300010039	Serpentine Soil	MSGETTVLVDARNVLRSQWPNVPEEELVERARSWAERHGQKLVLVFDGTAPGGVVGIEELDERTTLVGTGGESADDW
Ga0126314_100285555	3300010042	Serpentine Soil	VERKTTVLVDARNVLRSQWPNLPEEELVAQASEWALRNGHEIVLVFDGKAPGGIVGSEQRNSSTTLVGTGGESADDWLIREAPGYPGAWLVTSDRALREAAGT
Ga0126314_100845743	3300010042	Serpentine Soil	MSDITVLIDARNVQRSQWPNLSDEELVERTRNWAEQNDKRLVLVFDGKAPGGIVGATELDERTTLVGSRGESADDWLIREARHYPGAWLVTSD
Ga0126382_121717562	3300010047	Tropical Forest Soil	MTVLVDARNVLRSQWPNLPEEELVVQASEWAHRNDHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADD
Ga0126376_112856551	3300010359	Tropical Forest Soil	LLVFVDANNVRRSQWPNLTDEELVARTRDWAERHDHELVVVFDHRAPGGIEGIERLDDRTTLVGSGPESADDWLIGEVLAHPGAWLVTSDRALREA
Ga0134128_107886541	3300010373	Terrestrial Soil	VSRVFVDGRNVQRSQWPNLSDEQLVAHAVAEAERNGHELVVVFDGETGGLVGEERLDERTTLVGTGLESADD
Ga0138513_1000725822	3300011000	Soil	LATGATVLIDARNVLRSQWPNVPEDQLVERVRAWAERHGHEVVLVFDGKAPGGIVGAERLNQRTTLVGSGGESADDWLIREAPNYPGASRIS
Ga0151490_12582962	3300011107	Soil	LATVLIDARNVLRSQWPNVPEDELVRRCREWAERHGHQIVLVFDGAAPGGVVGVEHLDERTALVGSGQESADDWLAREP
Ga0151490_13363902	3300011107	Soil	MATVLVDARNVLRSQWPNVPEDELVERCRAWAARHDHDLVLVFDGTAPGGVVGVEQLDDRATLVGSGGESADDWLAREAPSYPDAWLVTSDRELRARAGGDAARIV
Ga0137382_103859992	3300012200	Vadose Zone Soil	VATVLIDARNVLRSQWPNVPERELVRRALDWAERHGHELVLVFDGEAPGGVTGTQRLDDRTLLVGSGAE
Ga0137382_104366961	3300012200	Vadose Zone Soil	MTTVLVDARNVQRSQWPNLPDEELVERARAWADRHDAELVLVFDGKAPDAGVGTKRLDDGTTLGGTGGESADDWL
Ga0137365_102296132	3300012201	Vadose Zone Soil	MSDETTVLIDARNVLRSQWPNLAERDLVERARAWAERHGRRIVLVFDGRAPGGVLGAEELDERTTLVGSGAESADEWLIREAPKYSGAWL
Ga0137374_110435132	3300012204	Vadose Zone Soil	MTTVLIDARNVLRSQWPNVPEQELVERTRAWAERHGHSVVLVFDGKAPGGIVGVEELDERTTLVGSGVESADDWLIREMPEYPGAWLVTSDRALRVAAGAEHVTGGGRFLRGLED*
Ga0137372_100354366	3300012350	Vadose Zone Soil	MATVLVDARNVLRSQWPNVPEEELVERCVEWAKRHGHDLVLVFDGRAPGGVVGEQRLREHGTLVGSGGESADDWLIREAPGHPGAWLVTSDR
Ga0137372_101598254	3300012350	Vadose Zone Soil	MTTVLIDARNVLRSQWPNVPEQELVERTRAWAERHGHSVVLVFDGKAPGGIVGAEELDERTTLVGSGVESADDWLIREMPEYP
Ga0137372_105946612	3300012350	Vadose Zone Soil	VSDETTVLIDARNVLRSQWPNLAERDLVERARAWAERHGRRIVLVFDGRAPGGVLGAEELDQLG
Ga0137366_101825761	3300012354	Vadose Zone Soil	MATVLVDARNVLRSQWPNVPEQDLVERVRAWADRHGHRVVLVFDGKAPGGIVGAQQLDERTTLVGSGAESADDWLIRETPKYPGAWLVTSD
Ga0157339_10584542	3300012505	Arabidopsis Rhizosphere	MSEATVLIDARNVQRSHWPNMPDEELVDRSRAWAEEHDNHVVLVFDGRAPGGVIGTTELDERTTLVGSGGESADDWLIREAPGYESAWLVTS
Ga0157303_100231261	3300012896	Soil	MTVLVDARNVLRSQWPNLPEEELVGLASEWARRNGHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIREAPGYPDAWLVTSDRALRDAAG
Ga0157283_100589271	3300012907	Soil	MTVLVDARNVLRSQWPNLPEEELVGLASEWARRNGHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIREAP
Ga0157283_104039081	3300012907	Soil	VLVFVDANNVRRSQWPNLSDEELVERTRHWAERHGHELVVVFDVQAPGDVVGSRKLDDRTTLVGSG
Ga0126375_100314761	3300012948	Tropical Forest Soil	VLIAANNVRRSKWSNLTGEELVQRTREWAARHGHEVVIVFDRRAPGDLVGEERPDERTTL
Ga0164298_106680472	3300012955	Soil	MTTVLVDARNVQRSQWPNVPDGELVERARGWADRHDAKLVLVFDGKAPDAGVGSKRLDERTTVVGTGGESADDWLIREAPGYPGAWLV
Ga0164299_112812272	3300012958	Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSERLDGRTTLVGSGSESADEWLIGA
Ga0164301_105682482	3300012960	Soil	MTTVLVDARNVQRSQWPNVPDGELVERARGWADRHDAKLVLVFDGKAPDAGVGSKRLDERTTVVG
Ga0164309_104262431	3300012984	Soil	MTTVLVDARNVQRSQWPNVPDGELVERARDWADRHDAKLVLVFDGKAPDAGVGSKRLDERTTV
Ga0164304_116408032	3300012986	Soil	MTTVLVDARNVQRSQWPKLPDDELVERARAWADRHDAELVLVFDGKAPSAGVGTKQLDERMTVVGTGGESADDWLIREAPVYPGAWLVTSDRALREAAGKS
Ga0157378_116838542	3300013297	Miscanthus Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGHESADEWLIREAPHYRHPWLVTSDRALRAAAGGE
Ga0163162_104931613	3300013306	Switchgrass Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGSES
Ga0163162_107417471	3300013306	Switchgrass Rhizosphere	MTVLVDARNVLRSQWPNLPEEQLVALASDWARRNGHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIREAPGYPDAWLVTSDRA
Ga0132258_124180901	3300015371	Arabidopsis Rhizosphere	VLVDANNVRRSQWPNLGEDELVRRTQEWAARHGHEVVIVFDRRAPGGLVGARRVDERTTLVGTGGESADDWLIREAPGYPGAWLVTSDRALREAASGA
Ga0132256_1008916491	3300015372	Arabidopsis Rhizosphere	VGEETTVLVDGRNVQRSQWPNLSDEELVERTRGWAERHARRVVVVFDGRALGGLVGRRELDERTTVVGTGGESADDWLI
Ga0132255_1000585536	3300015374	Arabidopsis Rhizosphere	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSERLDERTTLVGSGPESADEWLIGEVPAHPGAWLVTSDRALRG
Ga0132255_1055816872	3300015374	Arabidopsis Rhizosphere	VGEETTVLVDGRNVQRSQWPNLSDEELVERTRGWAERHARRVVVVFDGRALGGLVGRRELDERTTVVGTGGERADDWLIREAPNPPGAWLVPSDRALREAASSHA
Ga0187785_101003951	3300017947	Tropical Peatland	VATILIDARNVLRSQWPNVPERELVRRALDWAERHDHELVLVFDGEAPGGVTGRQRLDDRTLLVGSGAESADDWLI
Ga0187776_100202745	3300017966	Tropical Peatland	MATVLVDARNVLRSQWPNMPEGELVRRCRDWAGRHDHEIVLVFDGEAPGEVVGTETLDERTTLVGSRAVEVADEGPAALESYVRSLKEAL
Ga0184605_105066381	3300018027	Groundwater Sediment	VNEPATVLIDARNVLRSQWPNVPEQELVDRTRAWAERHGHTIVVVFDGTAPGDVVGTAELDERTTLVGSGAESADDW
Ga0187788_102630052	3300018032	Tropical Peatland	MPTVLVDARNVLRSQWPNVPEDELVRRCRDWAERHGHELVLVFDGEAPGGVVGGEQLDGRTTLVG
Ga0187773_109003492	3300018064	Tropical Peatland	MATVLVDARNVLRSQWPNMPEGELVRRCRDWAGRHDHEIVLVFDGEAPGEVVGTETLDERTTLVGSGGESADDWLAREAPRHPGAWLVTSDRELRERAGGEAA
Ga0184618_100283941	3300018071	Groundwater Sediment	VSDATVLIDARNVQRSKWPNLPDEELVERARAWAELNAKRIVLVFDGKAPGGVVGTPELDERTTLVGTGGESADDWLIRE
Ga0173482_100556231	3300019361	Soil	MTVLVDARNVLRSQWPNLPEEELVGLASEWARRNGHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIRE
Ga0193704_10833301	3300019867	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVGSSGESADDWLIREAPHYPGAW
Ga0193701_10298712	3300019875	Soil	MTTVLVDARNVQRSQWPNVPDDELVERAGAWADRHDAELVLVFDGKAPEAGVGTKQLDERATVVGTGGES
Ga0210382_102064722	3300021080	Groundwater Sediment	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNGKQIVLVFDGKAPGGVVGATELDERTTLVGSTGESADDWLIREAPHYPGAWLVTS
Ga0222623_102144272	3300022694	Groundwater Sediment	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGHESADEWLIREAPHYRH
Ga0222622_101102881	3300022756	Groundwater Sediment	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVGSSGESADDWLIREAPH
Ga0222622_105490761	3300022756	Groundwater Sediment	LAAGATVLIDARNVLRSQWPNVPEDELVERVRAWAERHGHEVVLIFDGKAPGGIVGAERLDQRT
Ga0247746_10949081	3300022886	Soil	MTVLVDARNVLRSQWPNLPEEELVGLASEWARRNGHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIREAPG
Ga0247677_10266841	3300024245	Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSERLDERTTLVGS
Ga0247680_10080964	3300024246	Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDSTAPGGIVGSERLDERTTLVGSGPESADEWLI
Ga0247679_10304921	3300024251	Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDSTAPGGIVGSERLDERT
Ga0247690_10111481	3300024287	Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSERLDERTTLVGSGPESADEW
Ga0207693_100700084	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSERLDERTTLV
Ga0207664_115374081	3300025929	Agricultural Soil	VLVFVDANNVRRSQWPNLSDEELVDRVRAWAERHEHESVIVFDRTAPGGIVGSERLDERTTLVGSGSESADEWLIGEVPAHPGAWLVTSDRALRGSAGG
Ga0207701_113986342	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGSESADE
Ga0207661_106616131	3300025944	Corn Rhizosphere	MSLVFVDGRNVQRSQWPNLSDEQLVERARAWAERNGHDLVVVFDGDMGGLVGEERLDERTTLVGTGRESADDWLIREVPNHPGAWLVT
Ga0207702_104768351	3300026078	Corn Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGSESADEWLIREASHYRHPW
Ga0209474_100050335	3300026550	Soil	VATVLIDARNVLRSQWPNVPEHQLVRRALDWAQRHDHELVLVFDGKAPGAVTGTQRLDERTLLVGSGAESADDWLIREAPGYPSAWLVTFDRALREAAGAGAERLIGGGAFLRELNA
Ga0209811_102880642	3300027821	Surface Soil	MTTVLVDARNVQRSQWPNVSDDELVERARAWADRHDAELVLVFDGKAPSAGVGTKQLDERMTVVGTGGESADDWLIREAPVYPGAWLVTS
Ga0247675_10191242	3300028072	Soil	VLVFVDANNVRRSQWPNLSDEELVERVRAWAERHEHESVIVFDRTAPGGIVGSERLDERTTLVGSGPESADEWLIGEVPA
Ga0268264_121618272	3300028381	Switchgrass Rhizosphere	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVG
Ga0247818_106657372	3300028589	Soil	MAEKATVLVDARNVQRSQWPNLPDEELVERARAWAESHDADAILVFDGRAPGGVLGARRLDARTTVVGTGGESADDWLTREAPN
Ga0307293_100824081	3300028711	Soil	VATVLVDARNVLRSQWPNVPEDELVRRCRDWGERHGHELVLVFDGEAPGGIVGEQRLDERTTLVGSGSESADDWLI
Ga0307311_100950892	3300028716	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNGKQIVLVFDGKAPGGVVGATELDERTTLVGSTGESADDW
Ga0307307_101679731	3300028718	Soil	VTTVLIDGRNVQRSRWPNLSDEELVELVQAWAEQNEHEVVLVFDGHAQGGLVGTERVDERTALIGTGGESADDWLIREAPKYPGAWL
Ga0307317_100202483	3300028720	Soil	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGHESADEWLIREAPHYRHPWLVTSDRALRAAAGG
Ga0307280_103947162	3300028768	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVGSSGESA
Ga0307288_101559011	3300028778	Soil	VATVLVDARNVLRSQWPNVPEDELVRRCRDWGERHGHDLVLVFDGEAPGGIVGEQRLDERTTLVGSGSESADDWLIREAQKRPG
Ga0307299_100238374	3300028793	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVGSSG
Ga0307287_102096122	3300028796	Soil	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTTLVGSGHESADEW
Ga0307284_101525051	3300028799	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVGSTGESADDWLIR
Ga0307284_103668381	3300028799	Soil	MSDTVLIDARNVQRSQWPNLPDEELVERVRAWAERNAKRIVLVFDGKAPGGIVGAAELDERMTLVGSSGESADDWLI
Ga0307305_102225482	3300028807	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNGKQIVLVFDGKAPGGVVGATELDERTTLVGSTGESADD
Ga0307292_100553181	3300028811	Soil	VADDTTVLVDARNVLRSQWPNVPEEELVERIRAWAERHGHKVVIVFDGKAPGGIVGTQRLDERTTLVGSGGESADDWLIREAPASPGAWLVTSDRALRA
Ga0307292_101638762	3300028811	Soil	MSDTVLIDARNVQRSQWPNLPDEELVERVRAWAERNAKRIVLVFDGKAPGGIVGAAELDERMTLVG
Ga0307292_103709311	3300028811	Soil	VTEATTVLVDARNVLRSQWPNLPEEELVERTRAWGERHGHRLVLVFDGTAPGGIVGAERLDGRTTL
Ga0247825_105010643	3300028812	Soil	MSTVLVDARNVQRSQWPNLTDEELIERARAWAERHDAELVLVFDGQALGGVGPQRLDERTTLVGTGGESADDWLIREAPG
Ga0247825_108622351	3300028812	Soil	MAEMATVLVDARNVQRSQWPNLPDEELVERARVWAESHDADAILVFDGRAPGGVLGERRLDARTTVVGTGGESADDWLTREAPNHQGAWLVTSDDLR
Ga0307302_100906701	3300028814	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVC
Ga0307296_100552191	3300028819	Soil	VADDTTVLVDARNVLRSQWPNVPEEELVERIRAWAERHGHKVVIVFDGKAPGGIVGTQRLDERTTLVGSDGESADDWL
Ga0307312_1000089818	3300028828	Soil	MTTVLVDARNVQRSQWPNVPDDELVERARAWADRHDAELVLVFDGKAPEAGVGTKQLDERATV
Ga0307289_103931582	3300028875	Soil	VATVLVDARNVLRSQWPNVPEDELVRRCRDWGERHGHELVLVFDGEAPGGIVGEQRLDERTTLVGSGSESADDWLIREAPKRPGAWLVTSD
Ga0307278_101012701	3300028878	Soil	LAAGATVLIDARNVLRSQWPNVPEDELVERVRAWAERHGHEVVLIFDGKAPGGIVGAERLDQRTTLVGSGGESADHWLI
Ga0307277_101477491	3300028881	Soil	VSDTVLIDARNVQRSQWPNLSDEELVERARSWAERNRKQIVLVFDGKAPGGVVGATELDERTTLVGSSGESADD
Ga0307277_102979351	3300028881	Soil	VATVLVDARNVLRSQWPNVPEDELVRRCSDWGERHGHELIVVFDGKAPGGIIGEQRLDERTTLVGSGAESADEWLIREAPEHPGAW
Ga0247827_105895042	3300028889	Soil	MSTVLVDARNVQRSQWPNLTDEELIERARAWAERPAVEHEHQFGVVALGGVGPQRLDERTTLV
Ga0307469_112446401	3300031720	Hardwood Forest Soil	VATVLIDARNVLRSQWPNVPERELVRRALDWAERHDHELVLVFDGEAPGGVTGPQRFDDRTLLVGSGAESADDWLIR
Ga0307473_110113062	3300031820	Hardwood Forest Soil	MSTVLVDARNVQRSQWPNLTDEDLVARARAWAERHDAELVLVFDGQALGDVGPQRLDARTTLVGTGGESADDWLIREAPAYPGAWLVTSDRALR
Ga0308174_117391411	3300031939	Soil	MTTVLVDARNVQRSRWPNMTDEELVERARAWAERHDAELVLVFDGRAPAAGVGTQRVDEHTTVVGTGGESADDWLIREAPAYPGAWLVT
Ga0308176_102405581	3300031996	Soil	VTLVLVDANNVRRSRWPNLDDDELVEQTRQWAERHGHEVVIVFDRRAPGGLVGEERLDERTILVGTGGESADDWLIREAPKHPGAWLVTSDRALRDA
Ga0308176_123972422	3300031996	Soil	MSRVFVDGRNVQRSQWPNLSDAQLVERARAWAERNAHELVVVFDGETGGLVGEERLDERTTLVGTGRESADDWLIRELPNHAGAWLVTSDRALR
Ga0335085_118827402	3300032770	Soil	VATILIDARNVLRSQWPNVPERELVRRALDWAERHGHELVLVFDGEAPGGVTGPQRLDDRTLLVGSGAESADDWLTREAPGYPGAWL
Ga0326731_11483461	3300033502	Peat Soil	VSDTTVLIDARNVQHSRWPNLRDEELVDRTRAWAEEQGNRVVLVFDGRAPGGGVGVTELDERTTLVGSGRESADDW
Ga0247830_104103981	3300033551	Soil	MTVLVDARNVLRSQWPNLPEEELVALASEWARRNGHEVVLVFDGKAPGGIVGTERRDSITTLVGTGGESADDWLIREAPGYPD
Ga0247830_104507222	3300033551	Soil	MSDATVLIDARNVQRSQWPNMPDDELVDRSRAWAEEHDNRVVLVFDGKAPGGVVGETELDGRTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053892

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences