Metagenome / Metatranscriptome Family F053878

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053878
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	91 residues
Representative Sequence	ERLATLEWATAERREAIADVRRELAGSMEAVRGERAVVVDDLRHIVDVVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR
Number of Associated Samples	104
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.21 %
% of genes near scaffold ends (potentially truncated)	90.71 %
% of genes from short scaffolds (< 2000 bps)	87.14 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (21.429 % of family members)
Environment Ontology (ENVO)	Unclassified (31.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.22% β-sheet: 0.00% Coil/Unstructured: 27.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF11218	DUF3011	11.43
PF04367	DUF502	4.29
PF13505	OMP_b-brl	4.29
PF03372	Exo_endo_phos	2.14
PF01594	AI-2E_transport	2.14
PF04366	Ysc84	2.14
PF02954	HTH_8	1.43
PF03328	HpcH_HpaI	1.43
PF00230	MIP	1.43
PF14417	MEDS	1.43
PF13185	GAF_2	0.71
PF02245	Pur_DNA_glyco	0.71
PF01648	ACPS	0.71
PF02687	FtsX	0.71
PF12840	HTH_20	0.71
PF04909	Amidohydro_2	0.71
PF12728	HTH_17	0.71
PF13360	PQQ_2	0.71
PF14255	Cys_rich_CPXG	0.71
PF00194	Carb_anhydrase	0.71
PF03781	FGE-sulfatase	0.71
PF13376	OmdA	0.71
PF14691	Fer4_20	0.71
PF00873	ACR_tran	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2928	Uncharacterized membrane protein	Function unknown [S]	4.29
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.14
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	2.14
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.43
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.43
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.43
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.43
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	0.71
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.71 %
Unclassified	root	N/A	44.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.71 %
Unclassified	root	N/A	44.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.00 %
Unclassified	root	N/A	44.29 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.86 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.29 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.29 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.86 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.86 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.14 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.71 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.86 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.14 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.71 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	2.86 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.14 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	0.71 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.71 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Faecalibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	2.86 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.43 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.71 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.71 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.71 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.57 %
Faecalibacterium prausnitzii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	2.86 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.43 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	0.71 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.71 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.71 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.71 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.71 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2109051	Not Available	588	Open in IMG/M
3300004114\|Ga0062593_101379323	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300004157\|Ga0062590_101912007	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300004463\|Ga0063356_101596109	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300004480\|Ga0062592_102468306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	522	Open in IMG/M
3300004643\|Ga0062591_100862377	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300004643\|Ga0062591_102033636	Not Available	593	Open in IMG/M
3300005293\|Ga0065715_10341084	Not Available	967	Open in IMG/M
3300005294\|Ga0065705_10151708	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300005294\|Ga0065705_10487192	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005331\|Ga0070670_100601458	Not Available	984	Open in IMG/M
3300005332\|Ga0066388_103695886	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	781	Open in IMG/M
3300005332\|Ga0066388_105813021	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	624	Open in IMG/M
3300005347\|Ga0070668_102154582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	515	Open in IMG/M
3300005354\|Ga0070675_100297229	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300005364\|Ga0070673_101778543	Not Available	584	Open in IMG/M
3300005365\|Ga0070688_100678989	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005367\|Ga0070667_101416680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	652	Open in IMG/M
3300005441\|Ga0070700_100204564	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300005441\|Ga0070700_100813115	Not Available	754	Open in IMG/M
3300005457\|Ga0070662_101756687	Not Available	536	Open in IMG/M
3300005543\|Ga0070672_100629710	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005544\|Ga0070686_100567471	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300005549\|Ga0070704_102109402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	524	Open in IMG/M
3300005564\|Ga0070664_101250286	Not Available	701	Open in IMG/M
3300005577\|Ga0068857_101760474	Not Available	606	Open in IMG/M
3300005616\|Ga0068852_100645956	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300005618\|Ga0068864_100400053	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300005713\|Ga0066905_102298424	Not Available	504	Open in IMG/M
3300005719\|Ga0068861_102162501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	557	Open in IMG/M
3300006049\|Ga0075417_10587421	Not Available	566	Open in IMG/M
3300006844\|Ga0075428_100010242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10409	Open in IMG/M
3300006844\|Ga0075428_100040990	All Organisms → cellular organisms → Bacteria	5092	Open in IMG/M
3300006844\|Ga0075428_100583357	Not Available	1194	Open in IMG/M
3300006846\|Ga0075430_101537983	Not Available	546	Open in IMG/M
3300006846\|Ga0075430_101586198	Not Available	537	Open in IMG/M
3300006846\|Ga0075430_101613408	Not Available	533	Open in IMG/M
3300006880\|Ga0075429_100580211	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300006881\|Ga0068865_101247143	Not Available	659	Open in IMG/M
3300007004\|Ga0079218_10737815	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300009094\|Ga0111539_10250383	All Organisms → cellular organisms → Bacteria → Acidobacteria	2063	Open in IMG/M
3300009094\|Ga0111539_10626695	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300009098\|Ga0105245_11628674	Not Available	697	Open in IMG/M
3300009148\|Ga0105243_10353217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1351	Open in IMG/M
3300009148\|Ga0105243_12609810	Not Available	545	Open in IMG/M
3300009156\|Ga0111538_10203313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2513	Open in IMG/M
3300009162\|Ga0075423_12674527	Not Available	546	Open in IMG/M
3300010362\|Ga0126377_10266102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1676	Open in IMG/M
3300010371\|Ga0134125_10187863	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300010399\|Ga0134127_11130539	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300010399\|Ga0134127_12940124	Not Available	555	Open in IMG/M
3300011333\|Ga0127502_11333844	Not Available	589	Open in IMG/M
3300011432\|Ga0137428_1111953	Not Available	783	Open in IMG/M
3300012899\|Ga0157299_10109902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300012907\|Ga0157283_10405635	Not Available	508	Open in IMG/M
3300012908\|Ga0157286_10403492	Not Available	531	Open in IMG/M
3300012915\|Ga0157302_10550135	Not Available	508	Open in IMG/M
3300012955\|Ga0164298_11246829	Not Available	566	Open in IMG/M
3300012961\|Ga0164302_11340593	Not Available	581	Open in IMG/M
3300012986\|Ga0164304_11090539	Not Available	638	Open in IMG/M
3300013100\|Ga0157373_10464239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	912	Open in IMG/M
3300013306\|Ga0163162_10007317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10729	Open in IMG/M
3300013308\|Ga0157375_11381445	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300014272\|Ga0075327_1192388	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300015200\|Ga0173480_11170527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300015371\|Ga0132258_10349878	All Organisms → cellular organisms → Bacteria → Acidobacteria	3653	Open in IMG/M
3300015371\|Ga0132258_10386113	All Organisms → cellular organisms → Bacteria → Acidobacteria	3475	Open in IMG/M
3300015371\|Ga0132258_11280537	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300015371\|Ga0132258_12249957	Not Available	1368	Open in IMG/M
3300015371\|Ga0132258_12357242	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300015372\|Ga0132256_100178376	All Organisms → cellular organisms → Bacteria → Acidobacteria	2157	Open in IMG/M
3300015372\|Ga0132256_103280068	Not Available	544	Open in IMG/M
3300015373\|Ga0132257_100113913	All Organisms → cellular organisms → Bacteria → Acidobacteria	3131	Open in IMG/M
3300015373\|Ga0132257_101828724	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300015373\|Ga0132257_101932178	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300015373\|Ga0132257_101955688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300015374\|Ga0132255_102620498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300017792\|Ga0163161_11825522	Not Available	541	Open in IMG/M
3300017965\|Ga0190266_10612808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300017965\|Ga0190266_11137057	Not Available	535	Open in IMG/M
3300018083\|Ga0184628_10215767	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300018432\|Ga0190275_10043571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3703	Open in IMG/M
3300018469\|Ga0190270_11348134	Not Available	758	Open in IMG/M
3300018469\|Ga0190270_12189487	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300018481\|Ga0190271_12865915	Not Available	579	Open in IMG/M
3300021271\|Ga0213897_101068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300024055\|Ga0247794_10186547	Not Available	663	Open in IMG/M
3300025907\|Ga0207645_10681594	Not Available	698	Open in IMG/M
3300025925\|Ga0207650_10482542	Not Available	1034	Open in IMG/M
3300025925\|Ga0207650_11583139	Not Available	556	Open in IMG/M
3300025926\|Ga0207659_10069544	All Organisms → cellular organisms → Bacteria → Acidobacteria	2564	Open in IMG/M
3300025961\|Ga0207712_11279277	Not Available	655	Open in IMG/M
3300025961\|Ga0207712_12075394	Not Available	509	Open in IMG/M
3300025981\|Ga0207640_11750224	Not Available	561	Open in IMG/M
3300025986\|Ga0207658_11554286	Not Available	605	Open in IMG/M
3300026067\|Ga0207678_11088097	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300026116\|Ga0207674_10378531	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300026976\|Ga0207525_103089	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300027513\|Ga0208685_1058887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300028587\|Ga0247828_10827467	Not Available	590	Open in IMG/M
3300028592\|Ga0247822_10287223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1254	Open in IMG/M
3300028782\|Ga0307306_10156777	Not Available	636	Open in IMG/M
3300028809\|Ga0247824_10213513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300028812\|Ga0247825_10092488	All Organisms → cellular organisms → Bacteria → Proteobacteria	2041	Open in IMG/M
3300031226\|Ga0307497_10185018	Not Available	891	Open in IMG/M
3300031538\|Ga0310888_10191967	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300031538\|Ga0310888_10235514	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300031538\|Ga0310888_11033503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	517	Open in IMG/M
3300031538\|Ga0310888_11096110	Not Available	503	Open in IMG/M
3300031562\|Ga0310886_10197765	Not Available	1094	Open in IMG/M
3300031562\|Ga0310886_10522886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	719	Open in IMG/M
3300031720\|Ga0307469_10431700	Not Available	1135	Open in IMG/M
3300031852\|Ga0307410_11284264	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031858\|Ga0310892_10810971	Not Available	649	Open in IMG/M
3300031903\|Ga0307407_10726263	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031908\|Ga0310900_11612588	Not Available	549	Open in IMG/M
3300031938\|Ga0308175_100045362	All Organisms → cellular organisms → Bacteria	3761	Open in IMG/M
3300031943\|Ga0310885_10625505	Not Available	599	Open in IMG/M
3300031944\|Ga0310884_10673387	Not Available	624	Open in IMG/M
3300031944\|Ga0310884_10939659	Not Available	535	Open in IMG/M
3300031995\|Ga0307409_101955924	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300032013\|Ga0310906_10937786	Not Available	619	Open in IMG/M
3300032017\|Ga0310899_10047061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1561	Open in IMG/M
3300032074\|Ga0308173_11791821	Not Available	578	Open in IMG/M
3300032075\|Ga0310890_10167195	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300032075\|Ga0310890_10442342	Not Available	975	Open in IMG/M
3300032075\|Ga0310890_10853120	Not Available	724	Open in IMG/M
3300032075\|Ga0310890_11044923	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300032179\|Ga0310889_10318401	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300032179\|Ga0310889_10354833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300032179\|Ga0310889_10488302	Not Available	623	Open in IMG/M
3300033412\|Ga0310810_10885292	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300033550\|Ga0247829_11066225	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300033550\|Ga0247829_11488209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	559	Open in IMG/M
3300033551\|Ga0247830_10914359	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300034149\|Ga0364929_0091026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.71%
Host-Associated	Host-Associated	44.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.86%
Plants	Host-Associated → Plants	44.29%
Aquatic	Environmental → Aquatic	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.00%
Sediment	Environmental → Aquatic → Sediment	2.14%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Floodplain	Environmental → Terrestrial → Floodplain	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Loam	Environmental → Terrestrial → Soil → Loam	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.14%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.71%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	21.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.14%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	21.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.14%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.43%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021271	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hamp_Cave_3	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026976	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21090511	3300000033	Soil	VEREQAVGAIVRAFAAXRXEXLRNVDSERLATLEWASNERREVIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0062593_1013793232	3300004114	Soil	TNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0062590_1019120072	3300004157	Soil	VSALLRAFAVERSEVLRNVETERLATLEWATNERREALAEVRREMAGSLVALRDERATVVGDVRHIIDVVLLRIALFIVAAVVLAPLVARAYARVWPRR*
Ga0063356_1015961092	3300004463	Arabidopsis Thaliana Rhizosphere	AERREAIANVHRELAGSINALRGERTVVVNDLRHIVDMILLRVALFLLAAVVLAPLVAHAYALVWPRRWRKPPT*
Ga0062592_1024683061	3300004480	Soil	AERREVLGNVDSERLATLEWATNERRESIAEVRRELAQSVAALRAERAVVVDDVRHIVDVVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0062591_1008623772	3300004643	Soil	WATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0062591_1020336361	3300004643	Soil	ATLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR*
Ga0065715_103410841	3300005293	Miscanthus Rhizosphere	AAERAELLRNVEAQRLATLEWATAERREAILDVHRDLAGAMAALRGERTTVVADVRRLVDVVLLRVAAFLVAALVVAPLVAHAYARVWPRRWRDPPK*
Ga0065705_101517081	3300005294	Switchgrass Rhizosphere	EQAIAGIVRAFAVERGELLRNIDAERLATLEWGTAERREAVAEVHRELAGSIDALRGERALVEDHLRHAIDLIFLRVALFLVAAVVLAPLVAHAYARVWPRRWRDDGARRPDARMS*
Ga0065705_104871922	3300005294	Switchgrass Rhizosphere	TLEWATAERREAIADVRRELAGSMEAVRGERAVVVDDLRHIVDAVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR*
Ga0070670_1006014582	3300005331	Switchgrass Rhizosphere	QRLATLEWATGERREAVADVRRELAGSMEALRGERAVVVNDVRHIVDVVLLRVALFVGVAVVLAPLVAHAYARVWPRRR*
Ga0066388_1036958862	3300005332	Tropical Forest Soil	ETILEVRRELAGAIGALRAERAIVVTDMRHIVDLVLLRLALGIIAAVVLAPLVAHAYVRVWPRRWREPSNGGA*
Ga0066388_1058130211	3300005332	Tropical Forest Soil	ERQETILEVRRELAGAIGALRGERATVVTDMRYIVDMVLLRVALGIIAAVVLAPLVAHAYARVWPRRWREPPNGAA*
Ga0070668_1021545821	3300005347	Switchgrass Rhizosphere	VLRNVDSERMATLDWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0070675_1002972292	3300005354	Miscanthus Rhizosphere	SERLATLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR*
Ga0070673_1006368091	3300005364	Switchgrass Rhizosphere	VERTELLRNMTLQRLATLEWATSERRETIKQVHDELAVSVAALRGERAVIVNDVRHIVDAILLREAIFLIAAVVFAPLIAHVYVRVWPRRREPPK*
Ga0070673_1017785431	3300005364	Switchgrass Rhizosphere	RTELLRGFDAERLATLEWATAERREAIADVHRELAESIEALRAERAVVVNDVRHIVDMVLLRVAIFLVAGVLLAPLVAHAYARVWPRRWRDPQRQSGGTEPRDPPAPPRST*
Ga0070688_1006789891	3300005365	Switchgrass Rhizosphere	AVSALLRAFAAERSEVLRNVETERLATLEWATNERREALAEVRREMAGSLVALRDERATVVGDVRHIIDVVLLRIALFIVAAVVLAPLVARAYARVWPRR*
Ga0070667_1014166801	3300005367	Switchgrass Rhizosphere	VRAFAAERSEVLRNVDAERLATLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR*
Ga0070700_1002045641	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ERSEVLRNVDSERMATLEWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0070700_1008131151	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PLIGALATERAELLRSFESQRLATLEWATAERREAIAEMHRELAGSVEALRRERAIVVDDVNHIVNGVLLRVALFLLAAVLLAPLVAHAYARVWPRRPAEKAARQPV*
Ga0070662_1017566872	3300005457	Corn Rhizosphere	AAERGEVLRDVASQRLVTLEWATAERREAIAEVGRELTGAIATLRGERAIALHEVRAIVNLVLLRVALFLIAGVVLAPLVAHAYARVWPRR*
Ga0070672_1006297102	3300005543	Miscanthus Rhizosphere	WATNERREAIAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR*
Ga0070686_1005674712	3300005544	Switchgrass Rhizosphere	TLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR*
Ga0070704_1021094021	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AAERSEVLRNVDSERLATLEWATNERRESIAEVRRELAQSVATLRAERAVVVDDVRHLVDVVLLRMAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0070664_1012502861	3300005564	Corn Rhizosphere	VRAFAAERNEVVRNVDSERLATLEWATNERRESIAEVRRELAQSVAALRAERAVVVDDVRHIVDVVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0068857_1017604742	3300005577	Corn Rhizosphere	VMEAITVEREQAVAGIVRAFAAERNEVLRNVDSERMATLDWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0068852_1006459562	3300005616	Corn Rhizosphere	LRSLEAQRLSTLEWATAERREAIAQLHRELTASIAALRSERAIVADDVRHVVDLVLLRVAVFLIAAVVLAPLVAHAYVRVWPRR*
Ga0068864_1004000531	3300005618	Switchgrass Rhizosphere	RSEVLRNVDSERLATLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR*
Ga0066905_1022984241	3300005713	Tropical Forest Soil	QRRATLTWATAERHETILEVRRELAGAIGALRGERAIVVTDMRHIVDLVLLRLALGIIAAVVLAPLVAHAYVRVWPRRWRESSNGGA*
Ga0068861_1021625011	3300005719	Switchgrass Rhizosphere	GIVRAFAAERNEVLRNVDSERMATLDWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0075417_105874211	3300006049	Populus Rhizosphere	LERLATLEWATAERREAIADVRRELAGSMEAVRGERAVVVDDLRHIVDVVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR*
Ga0075428_1000102421	3300006844	Populus Rhizosphere	AVNAIIRAFAAERSELLRNVDLERLATLEWATAERREAIADVRRALAGSMEAVRAERAVVVDDLRHIVDAVLLRVAMFLVAAVVLAPLVAHAYARVWPRRVR*
Ga0075428_1000409901	3300006844	Populus Rhizosphere	AVNAIIRAFAAERSELLRNVDLERLATLEWATAERREAIADVRRALAGSMETVRAERAVVVDDLRHIVDAVLLRVAIFLVAAVVLAPLVAHAYARVWPRRVR*
Ga0075428_1005833571	3300006844	Populus Rhizosphere	ERTELLRGVDAERMATFEWATAERREAIAEVHRELADSIEALRAERAVVVDDVRHIVDVVLLRVAIFLVAGVLLAPLVAHAYARVWPRRWRDPPRQSRGSEPRDPSGPPRSI*
Ga0075430_1015379831	3300006846	Populus Rhizosphere	RNVDLERLATLEWATAERRDAIADVRRALAGTMEAVRAERAVVVDDLRHIVDAVLLRLAIFLVAAVVLAPLVAHAYARVWPRRVR*
Ga0075430_1015861981	3300006846	Populus Rhizosphere	ERLATLEWATAERREAIADVRRELAGSMEAVRGERAVVVDDLRHIVDVVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR*
Ga0075430_1016134081	3300006846	Populus Rhizosphere	MGPMIRAFAAERTELLRNFESQRLATLEWATAERREAIAEVRRELAGSVEALRGERVVVIDDLRHIVDMVLLRVAIFLVAAVVLAPLVAHVYARVWPRRWRERQT*
Ga0075429_1005802111	3300006880	Populus Rhizosphere	REAIADVRRALAGSMEAVRAERAVVVDDLRHIVDVVLLRVAIFLVAAVVLAPLVAHAYARVWPRRVR*
Ga0068865_1012471431	3300006881	Miscanthus Rhizosphere	RDVESERRATLEWGTNERRQSMAEVRRDLAESMEALRGERAAVVHDLSHIVDVALLRIAVFLVAAVVLAPLVAHVYARVWPSRWREPRT*
Ga0079218_107378153	3300007004	Agricultural Soil	IGAFAEERTELLRNAEAQRLATLEWASAERREAIAALSRDLAGAVTALRGERAIVVDDMRGIVDMVLMRVALFLIAGVVLAPVVAHVYARVWPRRRT*
Ga0111539_102503831	3300009094	Populus Rhizosphere	TAERREAIADVRRALAGSMEAVRAERAVVVDDLRRIVDTVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR*
Ga0111539_106266954	3300009094	Populus Rhizosphere	RNEVLRNVDSERMATLEWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0105245_116286742	3300009098	Miscanthus Rhizosphere	TAERREAIAEVGRELTGAIATLRGERAIALHEVRAIVNLVLLRVALFLIAGVVLAPLVAHAYARVWPRR*
Ga0105243_103532173	3300009148	Miscanthus Rhizosphere	EAIAEVGRELAGAIATLRGERAIALYEVRAIVNLVLLRVALFLIAGVVLAPLVAHAYARVWPRR*
Ga0105243_126098101	3300009148	Miscanthus Rhizosphere	REAIAEMHRELAGSVEALRRERAIVVDDVNHIVNGVLLRVALFLLAAVLLAPLVAHAYARVWPRRPADKAARQPV*
Ga0111538_102033132	3300009156	Populus Rhizosphere	ATFEWATAERREAIAEVHRELADSIEALRAERAVVVDDVRHIVDVVLLRVAIFLVAGVLLAPLVAHAYARVWPRRWRDPQRQSGGSEPRDPSGPPRSM*
Ga0075423_126745271	3300009162	Populus Rhizosphere	ATLEWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0126377_102661021	3300010362	Tropical Forest Soil	LAAAIGALRGERATVVTDIRHIVDLVLLRLALGIIAAVVLAPLVAQAYVRICPRSHQDPSNGGV*
Ga0134125_101878631	3300010371	Terrestrial Soil	VEREQAVSAIVRALAAERREVLGNVDSERLATLEWATNERRESIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0134127_111305391	3300010399	Terrestrial Soil	AISVEREQAVSALLRAFAAERSEVLRNVEAERLATLEWATNERREALAEVRREMAGSMVALRGERATVVGDVRHIVDVVLLRIALFIVAAVVLAPLVARAYARVWPRR*
Ga0134127_129401241	3300010399	Terrestrial Soil	RDVASQRLLTLEWATAERREAIAEVGRELAGAIATLRGERAIALQELRGIVNMVLLRVAIFLIAGVVLAPLVAHAYVRVWPRR*
Ga0127502_113338441	3300011333	Soil	VDAIIRAFAAERSELLGSVEVQRLATLEWATTERHEAIADVRRELAGAMEAVRGERAVVVDDLRHIVDAVLLRAALFIVAAVLLAPLVAHAYARVWPRRLR*
Ga0137428_11119531	3300011432	Soil	REQAIDAIVGAFAADLNQLLRELELQRLATLEWATTERREAIADVVRELAGAVGTLRSERAIVVDDLNRMVDLVLLRVALFLVAAVVLAPIVAHAYARVWPRGRRERD*
Ga0157299_101099022	3300012899	Soil	SLERELAIGALIRAFAAERGELLQNAELQRLATLEWATGERREAVAEVRRDLAVSIDALHDGRAAVAADLRSIVDVVFLRVAVFLVVAVLLAPLVAHAYARVWPRRWREIGGQRSD*
Ga0157283_104056351	3300012907	Soil	AVGAIVRAFAAERTELLRGVDAERLATFEWATAERREAIAEVHRELAESIEALRAERAVVVNDVRHIVDMVLLRVAIFLVAGVLLGPLVAHAYARVWPRRWRDPQRQSRGGEPLDPSAPPRST*
Ga0157286_104034921	3300012908	Soil	REAIADVRRELAGSMEAVRGERAVVIDDLRRIVDAVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR*
Ga0157302_105501351	3300012915	Soil	AIDALVRALAAERSELLRNIQSQRVATLEWATAERRETVADVRRELAGSMTALDGERVVVVDDLRHLVDLVLVRVAIFLVAAVVLAPLVAHGYALVWPRRWRKPPK*
Ga0164298_112468291	3300012955	Soil	IVRAFAAERNELLLSLQSQREATLDWATAQRREATADVHRELAGSIDALRGERAVVVDDLRQIVDGVLLRVAMFLVAAVVLAPLVAHAYARVWPRRWRDPQRQSRGAEPRDPPAPPRST*
Ga0164302_113405931	3300012961	Soil	DAIVRALAAERGELLRNVDSERLATLEWASNERREAIAEGRRELAASIAALRGERAVVVDDVRHLVDVVLLRVALFLVVAVVLAPLVAHAYVRVWPRR*
Ga0164304_110905392	3300012986	Soil	RAFGAERSEVLRNVDAERLATLQWATNERRETLAEIRRELAESVAALRAERVVVVDDVRHIVDVILLRIAIFIIAGVLLAPLVAHAYARVWPRR*
Ga0157373_104642391	3300013100	Corn Rhizosphere	IAEVGRELTGAIATLRGERAIALYEVRAIVNLVLLRVALFLIAGVVLAPLVAHAYARVWPRR*
Ga0163162_1000731711	3300013306	Switchgrass Rhizosphere	IRAVAAERGEVLRDVASQRLVTLEWATAERREAIAEVGRELTGAIATLRGERAIALYEVRAIVNLVLLRVALFLIAGVVLAPLVAHAYARVWPRR*
Ga0157375_113814451	3300013308	Miscanthus Rhizosphere	SEVLRNVDSERLATLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR*
Ga0075327_11923881	3300014272	Natural And Restored Wetlands	EMLRDLESQRRATLEWATAERREAIADVRRDLAGSIEALRRERAVVVDDVRHIVDGVLLRVAMVLVAAVVLAPLVAHAYVRVWPRRRREPRT*
Ga0173480_111705272	3300015200	Soil	ATLEWATAERHEALDEVRRDLALSIDALRGERAAVAAEVRSIVDVVFLRCAAFLIAAILLAPLVAHAYARVWPRRSERRGSAAD*
Ga0132258_103498785	3300015371	Arabidopsis Rhizosphere	MARTFAVERSELLRDLAAQRLDTLKWATAERHEAIAEVHRELAGSMDTLRGERTTVVDDIRHIVDVVLLRVALFLIAAVVLAPLVAHIYARVWPRRWHEPKP*
Ga0132258_103861134	3300015371	Arabidopsis Rhizosphere	LAADLAELLRDLESQRLATLEWATAERREAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLTAAVVPAPLVAQAYARVWPRRWRELRA*
Ga0132258_112805373	3300015371	Arabidopsis Rhizosphere	HLLRDVEWQRRATLEWATAERREATAAVRQDIAAAVVQLRRERTALVNDMRRIVDVVSLRVALFVVFAVVLAPLIAHVYARVWPRRRRAPEK*
Ga0132258_122499571	3300015371	Arabidopsis Rhizosphere	ERELAIDTIIRALASERGELLRDITSQRVVTLEWASTERREAIAEVGRELAGAIAVLRGERAVAIDEMRGIVNMVLLRVAIFLIAGVVLAPLVAHAYVRVWPRR*
Ga0132258_123572422	3300015371	Arabidopsis Rhizosphere	RALATERREVLGNVDSERLATLEWATNERRESIAEVRRELAQSVAALRAERAVVVDDVRHIVDVVLLRMAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0132256_1001783763	3300015372	Arabidopsis Rhizosphere	LAADLAELLRDLESQRLATLEWATAERRGAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLAAAVVPAPLVAQAYARVWPRRWRELRA*
Ga0132256_1032800681	3300015372	Arabidopsis Rhizosphere	ILDVHRELAVSMVAMRAERAALVADVRRLVDVVLLRVAAFLVAAVVLAPLVAHAYARVWPRRWRDPPK*
Ga0132257_1001139135	3300015373	Arabidopsis Rhizosphere	LAADLAELLRDLESQRLATLEWATAERREAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLAAAVVPAPLVAQAYARVWPRRWRELRA*
Ga0132257_1018287241	3300015373	Arabidopsis Rhizosphere	RLDTLKWATAERHETIADVHRELAGSMEALRGERTLAFDDLRRIVDLVLLRVALFLVAAVVLAPVVAHVYARVWPRRWHDPKT*
Ga0132257_1019321781	3300015373	Arabidopsis Rhizosphere	NVDSERLATLEWATNERREAVAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR*
Ga0132257_1019556882	3300015373	Arabidopsis Rhizosphere	LEWATNERREAIAEVRRELAASITALRGERAVVVDDVRHLVDVVLLRVALFLVVAVVLAPLVAHAYVRVWPRR*
Ga0132255_1026204982	3300015374	Arabidopsis Rhizosphere	LATLEWATNERREAIAEVRRELAASITALRGERAVVVDDVRHLVDVVLLRVALFLVVAVVLAPLVAHAYVRVWPRR*
Ga0163161_118255222	3300017792	Switchgrass Rhizosphere	SERGELLRDIASQRLLTLEWATAERREAIAEVGRELTGAIATLRGERAIALYEVRAIVNLVLLRVALFLIAGVVLAPLVAHAYARVWPRR
Ga0190266_106128081	3300017965	Soil	GAVVVRDKQLVAFYAGPRALPVELLSAELQRLATLEWATGERREAIAELRGELVASIAALRGERAVVVAELRSIVNGVFLRLAVFLVAAVLLAPLVAHAYARVWPRRWRDIGGQRSD
Ga0190266_111370571	3300017965	Soil	LRSFELQRLATIQWATGERHEAIAELHRELAASIAALRGERAIVVDEVRDIVDAVLLRLALFLVAGVLLAPGIAHVYARVWPRRWRTPPK
Ga0184628_102157671	3300018083	Groundwater Sediment	QRLATLNWATGERHEAIAELHRELAESVAALRGERAIVVDEVRGIVDAVLLRLALFLVAGILLAPGIAHVYAQVWPRRWRTPRT
Ga0190275_100435716	3300018432	Soil	QRRATLTWATAERQAAVVDVRNELAVAMDALRHERALVLEDVRGLVDAVLLRIAIFLVAGVVLAPLVAHAYARVWPRRREPPA
Ga0190270_113481342	3300018469	Soil	EVELQRLATLEWATTERREAIADVVRELTGAVGTLRSERVIVVNDLNRMVDMVLLRVALFLVAAVVLAPIVAHAYARVWPRGRRERD
Ga0190270_121894871	3300018469	Soil	RGEVLRNAELQRLATLEWASVERRETIAEVSRELAAAIATLRTERALVVDDVRGIVDTVLLRVALFLIAGVVLAPIVAHAYAWVWPRRRQ
Ga0190271_128659151	3300018481	Soil	QRLATLEWANLERRDTIEQVRRELAAAMKIAQAERATVVDDVRGIVDTVLLRVALFLLIGVVLAPLVAHVYARVWPKHAR
Ga0213897_1010682	3300021271	Soil	RVELLQNAELQRLATLEWATGERREAVAEVRRDLAVSIDALRGERAAVVADLRSIVDVIFLRVAVFLVVAVLLAPLVAHAYARVWPRRWREIGGQRSD
Ga0247794_101865471	3300024055	Soil	VMDAVSVEREQAVGAIVRAFAAERSELLRNFDSERLATLEWATNERREAIAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR
Ga0207645_106815942	3300025907	Miscanthus Rhizosphere	VIEALSHERELAIGALIRAFALERGELLQNAELQRLATLEWATAERGEAVAEVRRDLAVSIDALHDGRAAVAADLRSIVDVIFLRVAVFLVAAVLLAPLVAHAYARVWPRRWREPPR
Ga0207650_104825421	3300025925	Switchgrass Rhizosphere	SFESQRLATLEWATGERREAVADVRRELAGSMEALRGERAVVVNDVRHIVDVVLLRVALFVGVAVVLAPLVAHAYARVWPRRR
Ga0207650_115831391	3300025925	Switchgrass Rhizosphere	ELLRDVESERRATLEWGTNERRQSMAEVRRDLAESMEALRGERTAVGHDLSHIVDVALLRIAVFLVAAVVLAPLVAHVYARVWPSRWREPRT
Ga0207659_100695443	3300025926	Miscanthus Rhizosphere	EQAVSALLRAFAAERSEVLRNVEAERLATLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR
Ga0207691_106921792	3300025940	Miscanthus Rhizosphere	NMTLQRLATLEWATSERRETIKQVHDELAVSVAALRGERAVIVNDVRHIVDAILLREAIFLIAAVVFAPLIAHVYVRVWPRRREPPK
Ga0207651_105495351	3300025960	Switchgrass Rhizosphere	FAVERTELLRNMTLQRLATLEWATSERRETIKQVHDELAVSVAALRGERAVIVNDVRHIVDAILLREAIFLIAAVVFAPLIAHVYVRVWPRRREPPK
Ga0207712_112792773	3300025961	Switchgrass Rhizosphere	SIADVRQELAASVAALRGERVIVVDDFRHIVDVIFLRIALFLVAAVLLAPIVAHAYARVWPRRWSEPQKDRAYRTVD
Ga0207712_120753942	3300025961	Switchgrass Rhizosphere	QAVSALLRAFAAERSEVLRNVEAERLATLEWATNERREALAEVRREMAGSMVALRGERATVVGDVRHIVDVVLLRIALFIVAAVVLAPLVARAYARVWPRR
Ga0207640_117502242	3300025981	Corn Rhizosphere	FAAERGELLRDVESERRATLEWGTNERRQSMAEVRRDLAESMEALRGERAAVVHDLSHIVDIALLRIAVFLVAAVVLAPLVAHVYARVWPSRWREPRT
Ga0207658_115542861	3300025986	Switchgrass Rhizosphere	DSERLATLEWATNERREALAEVRRELAESAAVLRAERALVVNDVRHIVDGVLLRIAIFIIAGVVLAPLVAHAYARVWPRR
Ga0207678_110880971	3300026067	Corn Rhizosphere	ETIADVHREMAGSMTALDGERVVVVDDLRHLVDLVLLRVAIFLVAAVAFAPLVAHLYALVWPRRWRKPPK
Ga0207674_103785311	3300026116	Corn Rhizosphere	VMEAITVEREQAVAGIVRAFAAERNEVLRNVDSERMATLDWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR
Ga0207525_1030891	3300026976	Soil	ARAAAPRVMAVILRDVSALDRQRLATLEWATRERREAIADIHRELAESIAALRAERAIVVDDVRQIVDAVLLRTAIFLIAGVLLAPVVAHVYALVWPRRWRKART
Ga0208685_10588872	3300027513	Soil	VRIEYAAMLPEAILAIGALIRAFAAERGELLQNAELQRLATLEWATGERREAVAEVRRDLAVSIDALRGERAAVVADLRSIVDVIFLRVAVFLVVAVLLAPLVAHAYARVWPRRWREIGGQRSD
Ga0247828_108274672	3300028587	Soil	AVAGIVRAFAAERNEVLRNVDSERMATLDWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR
Ga0247822_102872233	3300028592	Soil	WATAERREAVADVHRELAGSIEALRGERAVVVEDVRNIVDLVLLRVGIFFVAAVVLAPLVAHAYARVWPERWRNPPA
Ga0307306_101567772	3300028782	Soil	TGERREAVADLHREFAESIAALRGERAVVINDVRHIVDAVLLRVAIFLIAGVLLAPVVAHVYVWVWPRRRRKPGTTAGGSDVHG
Ga0247824_102135131	3300028809	Soil	GLLAWATAERHDAIAEVRHELGGSMESLRGERAIVLGDLQRMIDVVLLRVAIFLAAAVVLAPLVAHAYVRVWPRR
Ga0247825_100924881	3300028812	Soil	LEAQRLATLEWATAERREAIADVRKELAGSVDVLRSERAIVVDDFRHIVDLVLLRVGVFLLAAVLLAPLVAHAYARVWPRRWRQPQP
Ga0307497_101850181	3300031226	Soil	AAERGEVLRDVASQRLVTLEWATAERREAIAEVGRELAGAIATLRGERAIALYEVRAIVNLVLLRVALFLIAGVVLAPLVAHAYARVWPRR
Ga0310888_101919671	3300031538	Soil	LAADLAELLRDLESQRLATLEWATAERREAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLAAAVVLAPLVAHASARVWPRRWREPRA
Ga0310888_102355143	3300031538	Soil	ATLEWATAERRQAIADVHRELTGSMEALRGERAVVVDDLRHIIDLVLLRVAIFLVVAVVLAPLVAHAYARVWPRRLR
Ga0310888_110335032	3300031538	Soil	RSFELQRLATLEWATAERREAIADVHRELAGSMEALHGERAVVVDDLRHIVDVVLLRVAIFLVAAVVLAPLVAHAYALVWPRRWRKPPT
Ga0310888_110961101	3300031538	Soil	LATLEWATAERLAAIADVRRELAGSMEVVRGERAVVIADLRDIVDVVLLRVAVFLVAGVLLAPLVAHAYARVWPRRRR
Ga0310886_101977651	3300031562	Soil	PLIGALATERAELLRSFESQRIATLEWATAERREAIAEMHRELAGSVEALRRERAIVVDDVNQIVNGVLLRVALFLLAAVLLAPLVAHAYARVWPRRPAEKAARQPV
Ga0310886_105228861	3300031562	Soil	NVELQRLATLEWATAERREAIADLRRELAGSMEAVRGERAVVVDDLRHLVDVVLLRVALFLVAALVLAPLVAHAYARVWPRRLR
Ga0307469_104317001	3300031720	Hardwood Forest Soil	RDVTSQRLVTLEWASTERREAIADVGRELAGAIAVLRGERAIAIDEVRGIVNMVLLRVAIFLIAGVVLAPLVAHAYVRVWPRR
Ga0307410_112842642	3300031852	Rhizosphere	AFAEERSELMRSFEVQRLATLEWATAERREAVADVHRELAGSIDALRGERAVVVEDVRNIVDLVLLRVGIFFVAAVVLAPLVAHAYARVWPERWRQPPT
Ga0310892_108109711	3300031858	Soil	LAADLAELLRDLESQRLATLEWATAERREAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLAAAVVPAPLVAQAYARVWPRRWRELRA
Ga0307407_107262631	3300031903	Rhizosphere	EMLRNFEAQRRATLEWATAERHATVLEVRNELTGAMEALRAERAVVVGHTRRLVDTVLLRIALFLVAGVVLAPLVAHAYVRVWPRRREPPA
Ga0310900_116125882	3300031908	Soil	DLESQRLATLEWATAERREAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLTAAVVPAPLVAQAYARVWPRRWRELRA
Ga0308175_1000453621	3300031938	Soil	VERGRAVDPIIAAVAQERIEMLRSLEAQRLSTLEWATAERREAIAQLHRELTASMAALRSERAIVADDVRHVVDLVLLRVAVFLVAAVVLAPLVAHAYVRVWPRR
Ga0310885_106255051	3300031943	Soil	IRAFAAERSELLRNVEWERLATLEWATAERREAIADVHRELAGSMEAVRGERALVVDDLRHIVDVVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR
Ga0310884_106733871	3300031944	Soil	WATAERREAIAEMHRELAGSVEALDRERAIVVDDVNQIVNGVLLRVALFLLAAVLLAPLVAHAYARVWPRRPAEKAARQPV
Ga0310884_109396592	3300031944	Soil	SQRRATLEWATAERREAIADVRRELAGSMEALRGERAVVIDDLRHIVDAVLLRVAMFLVAAVVLAPLVAHAYARVWPRRLLR
Ga0307409_1019559241	3300031995	Rhizosphere	VAAFAAERGEMLRNFEAQRRATLEWATAERHATVLDVRNELTGAMEALRAERAVVVGHTRRLVDTVLLRIALFLVAGVVLAPLVAHAYVRVWPRRREPPA
Ga0310906_109377862	3300032013	Soil	LRIAPRRAIDAIVRAFAEECGEPLRSSELQRLATLELATAERHSAIAEVHRELAVPMEAPRAERAIVVADVRHIVDVVLLRVAVFLAAAVVLAPLVAHAYARVWPRRWREPRA
Ga0310899_100470612	3300032017	Soil	LGNVDLERLATLEWATAERREAIAEVRRALARSMEAVRAERAVVVDDLRRIVDAVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR
Ga0310899_101292541	3300032017	Soil	LLRNMTLQRLATLEWATIERRETIKEVHNELAVSLAALRGERAVIVNDVSHIVDAILLRETIFLIAAVVFAPLIAHVYVRVWPRRREPPK
Ga0308173_117918212	3300032074	Soil	RSLEAQRLSTLEWATAERREAIAQLHRELTASMAALRSERAIVADDVRHVVDLVLLRVAVFLVAAVVLAPLVAHAYVRVWPRR
Ga0310890_101671953	3300032075	Soil	DLAELLRDLESQRLATLEWATAERREAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLTAAVVPAPLVAQAYARVWPRRWRELRA
Ga0310890_104423421	3300032075	Soil	REQAVNAIIRAFAAERSELLRNVDLERLATLEWATAERREAIADVRRALAGSMEALRAERAVVVDDLRHIVDAVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR
Ga0310890_108531201	3300032075	Soil	LEWATAERRETIAEVRRELLGSMKALDGERAVVVDDMRHIVDVISLRVAGFLVAAVVLAPLVAHAYVRLWPRRWREPRT
Ga0310890_110449232	3300032075	Soil	RGEMLRNFESQRRATLEWATAERHEGITEVRHELAGAMEALRRERAVILDDVRHIVDAVLLRVALFLVAAVLLAPLVAHAYVRLWPRRRREPPA
Ga0310889_103184012	3300032179	Soil	FPKLAADLTELLRNLESQRLATLEWATAERREAIADVHRELAGSMGAVRDERAIVLEDLRHIIDVVLLRVAVFLTAAVVPAPLVAQAYARVWPRRWRELRA
Ga0310889_103548332	3300032179	Soil	AERVELLQNAELQRLATLEWATGERREAVAEVRRDLAVSIDALRGERAAVVADLRSIVDVIFLRVAVFLVVAVLLAPLVAHAYARVWPRRWREIGGQRSD
Ga0310889_104883021	3300032179	Soil	IRAFAAERSELLRDVDLERLATLEWATAERREAIADVRRALAGSMEALRAERAVVVDDLRHIVDAVLLRVAIFLVAAVVLAPLVAHAYARVWPRRLR
Ga0310810_108852922	3300033412	Soil	SEVLRNVDSERMATLEWATNERREAIAEVRRELAQSVAALRAERAVVVDDVRHIVDLVLLRVAIFLVAAVVLAPLVAHAYVRVWPRR
Ga0247829_110662252	3300033550	Soil	RLATLEWATAERREAVADVHRELAGSIEALRGERAVVVEDVRNIVDLVLLRVGIFFVAAVVLAPLVAHAYARVWPERWRPPPT
Ga0247829_114882091	3300033550	Soil	VRAFAAERDELLRGLEGQRLATLEWATAERREIVAEVHRELAASIEALRVERTVVITNVRDVVDIVLLRVAAFLVAAVVVAPLIAHAYARVWPRRRRDPKA
Ga0247830_109143592	3300033551	Soil	VERERAVGAIVSAFAVERSEMLRNFESQRRATLEWATAERHEAISEVRHELAGAMDALRRERGVVVDDVRHIVDAVLLRVAIFLVAAVVLAPLVAHAYVRLWPRRPREPRA
Ga0364929_0091026_699_953	3300034149	Sediment	TLEWATGERREAVAEVRRDLAVSIDALRGERAAVVADLRSIVDVIFLRVAVFLVVAVLLAPLVAHAYARVWPRRWREIGGQRSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053878

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences