Metagenome / Metatranscriptome Family F053852

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F053852
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	56 residues
Representative Sequence	VIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITLNGKQRWKIVAKVLWWIGKAP
Number of Associated Samples	112
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.71 %
% of genes near scaffold ends (potentially truncated)	90.00 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (94.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.857 % of family members)
Environment Ontology (ENVO)	Unclassified (39.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.05% β-sheet: 16.67% Coil/Unstructured: 64.29%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00072	Response_reg	8.57
PF03653	UPF0093	4.29
PF01740	STAS	3.57
PF04199	Cyclase	2.14
PF13545	HTH_Crp_2	2.14
PF13087	AAA_12	2.14
PF00480	ROK	2.14
PF02518	HATPase_c	2.14
PF01931	NTPase_I-T	1.43
PF14361	RsbRD_N	1.43
PF00027	cNMP_binding	1.43
PF00578	AhpC-TSA	1.43
PF01037	AsnC_trans_reg	1.43
PF00717	Peptidase_S24	0.71
PF13083	KH_4	0.71
PF13628	DUF4142	0.71
PF12867	DinB_2	0.71
PF07730	HisKA_3	0.71
PF12704	MacB_PCD	0.71
PF02687	FtsX	0.71
PF13407	Peripla_BP_4	0.71
PF01345	DUF11	0.71
PF01610	DDE_Tnp_ISL3	0.71
PF00691	OmpA	0.71
PF00990	GGDEF	0.71
PF04909	Amidohydro_2	0.71
PF01904	DUF72	0.71
PF01258	zf-dskA_traR	0.71
PF13478	XdhC_C	0.71
PF13466	STAS_2	0.71
PF01402	RHH_1	0.71
PF13426	PAS_9	0.71
PF05509	TraY	0.71
PF03795	YCII	0.71
PF00196	GerE	0.71
PF14294	DUF4372	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	4.29
COG1981	Protoporphyrinogen oxidase HemJ (unrelated to HemG or HemY)	Coenzyme transport and metabolism [H]	4.29
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	2.14
COG1986	Non-canonical (house-cleaning) NTP pyrophosphatase, all-alpha NTP-PPase family	Defense mechanisms [V]	1.43
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.71
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.71
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.71
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.71
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.71
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.71
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.14 %
Unclassified	root	N/A	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	56.43 %
Unclassified	root	N/A	5.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.43 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.43 %
Unclassified	root	N/A	5.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.86 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.71 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.43 %
Unclassified	root	N/A	5.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.86 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.71 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.43 %
Unclassified	root	N/A	5.71 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2.14 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.71 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.71 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.71 %
Acetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.43 %
Unclassified	root	N/A	5.71 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1.43 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.71 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.71 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.71 %
Acetobacter nitrogenifigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter nitrogenifigens	0.71 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.71 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	56.43 %
Unclassified	root	N/A	5.71 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1.43 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.71 %
Acetobacter nitrogenifigens DSM 23921 = LMG 23498	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter nitrogenifigens → Acetobacter nitrogenifigens DSM 23921 = LMG 23498	0.71 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.71 %
Paenibacillus alvei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus alvei	0.71 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.71 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01BRTCO	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
2189573001\|GZR05M101A8NXI	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
2209111019\|2221122681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300000789\|JGI1027J11758_12073309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300004080\|Ga0062385_10033856	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300004092\|Ga0062389_103793293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300004092\|Ga0062389_103936889	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300004092\|Ga0062389_104575796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus alvei	520	Open in IMG/M
3300004479\|Ga0062595_102050684	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300005175\|Ga0066673_10151997	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300005434\|Ga0070709_10282860	All Organisms → cellular organisms → Bacteria → Acidobacteria	1206	Open in IMG/M
3300005435\|Ga0070714_101377646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005445\|Ga0070708_100189838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1921	Open in IMG/M
3300005445\|Ga0070708_100540393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300005468\|Ga0070707_102046014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005471\|Ga0070698_100571012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300005534\|Ga0070735_10534241	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005552\|Ga0066701_10644605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300005569\|Ga0066705_10196438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1261	Open in IMG/M
3300005586\|Ga0066691_10178446	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005586\|Ga0066691_10220990	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005602\|Ga0070762_11080601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300006028\|Ga0070717_11125308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter nitrogenifigens → Acetobacter nitrogenifigens DSM 23921 = LMG 23498	715	Open in IMG/M
3300006059\|Ga0075017_100183486	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300006871\|Ga0075434_101779224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	623	Open in IMG/M
3300007788\|Ga0099795_10176470	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300007788\|Ga0099795_10506657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300009088\|Ga0099830_10166543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1705	Open in IMG/M
3300009088\|Ga0099830_10220177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1492	Open in IMG/M
3300009090\|Ga0099827_10835698	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300009137\|Ga0066709_100112125	All Organisms → cellular organisms → Bacteria	3379	Open in IMG/M
3300009143\|Ga0099792_10628626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300009522\|Ga0116218_1264675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300010159\|Ga0099796_10341958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010379\|Ga0136449_101735404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300011120\|Ga0150983_11016099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300011120\|Ga0150983_11768195	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300011269\|Ga0137392_10277709	Not Available	1382	Open in IMG/M
3300011269\|Ga0137392_10310008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300011270\|Ga0137391_10678823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300011270\|Ga0137391_10728209	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300011271\|Ga0137393_10103419	All Organisms → cellular organisms → Bacteria	2328	Open in IMG/M
3300012004\|Ga0120134_1102221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012199\|Ga0137383_10051353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2948	Open in IMG/M
3300012199\|Ga0137383_10134867	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300012202\|Ga0137363_10179115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1687	Open in IMG/M
3300012202\|Ga0137363_10243713	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300012202\|Ga0137363_11513039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012203\|Ga0137399_11413755	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300012203\|Ga0137399_11674538	Not Available	524	Open in IMG/M
3300012205\|Ga0137362_11095093	Not Available	677	Open in IMG/M
3300012206\|Ga0137380_10034134	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300012207\|Ga0137381_10003570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11104	Open in IMG/M
3300012209\|Ga0137379_10020496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6353	Open in IMG/M
3300012211\|Ga0137377_10225866	Not Available	1799	Open in IMG/M
3300012211\|Ga0137377_11755256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012349\|Ga0137387_10006840	All Organisms → cellular organisms → Bacteria → Acidobacteria	6445	Open in IMG/M
3300012351\|Ga0137386_11265466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300012351\|Ga0137386_11306768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012354\|Ga0137366_10866625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012357\|Ga0137384_10916220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300012357\|Ga0137384_11334377	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012363\|Ga0137390_10308325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300012363\|Ga0137390_11169533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300012582\|Ga0137358_10727506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300012582\|Ga0137358_11070735	Not Available	516	Open in IMG/M
3300012683\|Ga0137398_10783937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012922\|Ga0137394_10677811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300012923\|Ga0137359_11721100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012924\|Ga0137413_10137544	All Organisms → cellular organisms → Bacteria → Acidobacteria	1579	Open in IMG/M
3300012924\|Ga0137413_10294659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300012927\|Ga0137416_10183700	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M
3300012927\|Ga0137416_10949270	Not Available	766	Open in IMG/M
3300012927\|Ga0137416_11028998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300012944\|Ga0137410_11086637	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300012971\|Ga0126369_12898357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300013296\|Ga0157374_10587335	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	1123	Open in IMG/M
3300013297\|Ga0157378_11020109	Not Available	862	Open in IMG/M
3300014168\|Ga0181534_10416611	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300015242\|Ga0137412_11243871	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300015264\|Ga0137403_10037555	All Organisms → cellular organisms → Bacteria	5078	Open in IMG/M
3300015264\|Ga0137403_10466016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300016371\|Ga0182034_11662318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	561	Open in IMG/M
3300016387\|Ga0182040_10303175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300017948\|Ga0187847_10417423	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300017994\|Ga0187822_10114716	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300018047\|Ga0187859_10120121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1386	Open in IMG/M
3300019882\|Ga0193713_1063589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300020140\|Ga0179590_1083285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300020580\|Ga0210403_11177522	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300020581\|Ga0210399_10088621	All Organisms → cellular organisms → Bacteria → Acidobacteria	2519	Open in IMG/M
3300020581\|Ga0210399_10924400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300020583\|Ga0210401_10761858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300021170\|Ga0210400_11250866	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300021171\|Ga0210405_10482558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300021178\|Ga0210408_10996464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300021181\|Ga0210388_10706444	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300021404\|Ga0210389_10546641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300024279\|Ga0247692_1062533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300024330\|Ga0137417_1409643	Not Available	686	Open in IMG/M
3300025612\|Ga0208691_1114395	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300025910\|Ga0207684_10014513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6790	Open in IMG/M
3300025922\|Ga0207646_11453794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300026304\|Ga0209240_1225211	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300026354\|Ga0257180_1011705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300026376\|Ga0257167_1081435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300026514\|Ga0257168_1129532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300026551\|Ga0209648_10102539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2342	Open in IMG/M
3300026557\|Ga0179587_10489902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300027460\|Ga0207506_1004865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300027676\|Ga0209333_1076966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	914	Open in IMG/M
3300027745\|Ga0209908_10228994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	518	Open in IMG/M
3300027842\|Ga0209580_10398899	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300027846\|Ga0209180_10080476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1839	Open in IMG/M
3300027862\|Ga0209701_10057866	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300027862\|Ga0209701_10160217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300028047\|Ga0209526_10493046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300028906\|Ga0308309_10683133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300029943\|Ga0311340_10322723	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300030845\|Ga0075397_10584444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300030916\|Ga0075386_12170900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031023\|Ga0073998_10996646	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031057\|Ga0170834_111598235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300031128\|Ga0170823_17128387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300031231\|Ga0170824_100868861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300031231\|Ga0170824_105831672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300031231\|Ga0170824_119251317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031231\|Ga0170824_124700744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300031234\|Ga0302325_12438294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300031446\|Ga0170820_10965559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300031469\|Ga0170819_10074670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300031469\|Ga0170819_17096198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031474\|Ga0170818_107344618	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300031753\|Ga0307477_10591475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300031754\|Ga0307475_11297875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300031820\|Ga0307473_10074581	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300031823\|Ga0307478_10017141	All Organisms → cellular organisms → Bacteria	5065	Open in IMG/M
3300031962\|Ga0307479_11166433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300032174\|Ga0307470_11767593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300032261\|Ga0306920_101334607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.86%
Host-Associated	Host-Associated	2.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.71%
Aquatic	Environmental → Aquatic	7.14%
Plants	Host-Associated → Plants	2.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.29%
Freshwater	Environmental → Aquatic → Freshwater	6.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.14%
Peat	Environmental → Terrestrial → Peat	1.43%
Sediment	Environmental → Aquatic → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.14%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.14%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.43%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2209111019	Grass soil microbial communities from Rothamsted Park, UK - FP1 and FP2 (Mercury 0.2g/kg) assembled	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_895060	2040502001	Soil	VIAWNKDKGLIVSRMRHYDGTTVLQPENPQYESITLNKANRWKVLARVLWWIGKAP
FD2_03748000	2189573001	Grass Soil	LTVSRLNQFDHTIVLQSENASYESITLSSKQKWKIVAKVLWWIGKSP
2221859584	2209111019	Grass Soil	LNGKIVIAWHKDRGLTVSRLRRFDHTEVLEPENHGYEAITLGAKQRWTILAKVLWWIGKA
JGI1027J11758_120733091	3300000789	Soil	SDGHILVVDFAQNNIAELDGKVVIAWHKDKGLTVSRLKRYDHTFVLQSENASYESTTPTANSKQRWKIIAKVLWWIGKAP*
Ga0062385_100338561	3300004080	Bog Forest Soil	LTVSRLQRYGHTDTLQPENREYQSITLDSKHKWKILAKVLWWIGKAP*
Ga0062389_1037932931	3300004092	Bog Forest Soil	IVAVDSSQTDRSKLDGKIVIAWNKDKGLTVSRFKRYDHTETLQPENPQHESLTLGKKNDRWKVVAKALWWIGKAP*
Ga0062389_1039368892	3300004092	Bog Forest Soil	AWHKDIGLTISRFRRFDHTEVLQAENAEYEAVTLGPKQTWKIVAKVLWWVGKAP*
Ga0062389_1045757961	3300004092	Bog Forest Soil	RSKLNGKIVIAWKKDKGLTVSRFKRYDHTETLQPENPRYESITLGHKNDKWKIVAKVLWWIGRAP*
Ga0062595_1020506842	3300004479	Soil	RRYDQTEVLSPDNREYASVTMDRKNNWKIIAKVLWWIGKAP*
Ga0066673_101519971	3300005175	Soil	HRDKGLTVSRLNQFDHTIVLQSENASYEPITLGSKQKWKIVAKVLWWIGKSP*
Ga0070709_102828603	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	KGLTVSRLKRYDHTVVLQSENSSYESVTLSGKQKWKIVAKVLWWIAKAP*
Ga0070714_1013776463	3300005435	Agricultural Soil	SVSRLQAYDHTEVLRAENSAYESVVLDKKHSWKIVAKVLWWIGKAP*
Ga0070708_1001898383	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITFNSKQRWKIVAKVLWWIGKAP*
Ga0070708_1005403932	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ASHQDKGLTVSRLKRYDHTVVLQSENTSYESITLSGKQKWKIVARVLWWIGKAP*
Ga0070707_1020460142	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIAFHKNTGLSVSRLKRYDHTVVLHSENTSYESITLSAKQKWKIVARVLWWIGKAP*
Ga0070698_1005710122	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	KNTGLSVSRLKRYDHTVVLHSENTSYESITLSAKQKWKIVARVLWWIGKAP*
Ga0070735_105342411	3300005534	Surface Soil	DVGLTVSRLRRYDHTEVLHPENREYESITLDRKNQWKIIAKVLWWIGKAP*
Ga0066701_106446051	3300005552	Soil	ELDGKVVIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITLNGKQRWKIVAKVLWWIGKAP*
Ga0066705_101964383	3300005569	Soil	NGKIVIAWHRDQGLTVSRLNQFDHTVVLQSENTSHESITLGRKEKWRIVAKVLWWIGKSP
Ga0066691_101784461	3300005586	Soil	LTVSRLQHYDHTDVLQPESREYESIILDNKHEWKIMGKVLWWIGNAP*
Ga0066691_102209902	3300005586	Soil	LTVSRLQHYDHTDVLQPESREYESIVLDSKHEWKIMAKVLWWIGSAP*
Ga0070762_110806011	3300005602	Soil	QKDRGLTVSRLRRFDHTEVLEPENHGYESIMLSAKHRWTILAKVLWWIAKAP*
Ga0070717_111253082	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LNVSRLKRYGPTEVLQPENSESESVVLNGKHKWKILAKVLWWIGKAP*
Ga0075017_1001834861	3300006059	Watersheds	LNGKIVIAWHKDRGLTVSRLRRFDHTEVLEPENHGYEAITLGAKQRWTILAKVLWWIGKAP*
Ga0075434_1017792242	3300006871	Populus Rhizosphere	MEKIVIAWHKDRGLTVTRLRRFDHTEVLEPENHEYESITLGSKQRWTILAKVLWWIAKA
Ga0099795_101764701	3300007788	Vadose Zone Soil	WHRDKGLTVSRLNQFDHTVVLQSENASYESITLGRKEKWKIVAKALWFIGKSP*
Ga0099795_105066572	3300007788	Vadose Zone Soil	LTVSRLKKYGPAEVLQPENGDYESVVLNGKQKWKILARVLWWIGKAP*
Ga0099830_101665431	3300009088	Vadose Zone Soil	KVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITVNGKQRWKIVAKVLWWIGKAP*
Ga0099830_102201773	3300009088	Vadose Zone Soil	IAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP*
Ga0099827_108356982	3300009090	Vadose Zone Soil	AWHRDQGLKVSRLNQFDHTIVLQSENANYEAITLSGKQKWKIVAKVLWWIGKSP*
Ga0066709_1001121257	3300009137	Grasslands Soil	VDFAQNDVIELSGKIVIAWHSDMGLTVSRLRRYDHTLVLQSENPSHESITLSAKQKWKIVAKVLW*
Ga0099792_106286261	3300009143	Vadose Zone Soil	VVIAWNRDRGLMVSRLRHYDHTAVLQPESKEYDSIVLNSKDKWKIVAKVLWWLEKAP*
Ga0116218_12646751	3300009522	Peatlands Soil	WNKDVGLTVSRFRRYDHTEVLHPENREYGSITLDRKNNWKIIAKVLWWIGKAP*
Ga0099796_103419581	3300010159	Vadose Zone Soil	RDMGLTVSRLQHYDHTTVLQPESRNYESIVLDSEHKWKIVAKVLWWIEKAP*
Ga0136449_1017354041	3300010379	Peatlands Soil	DHTEVLHAENREYGSITMDRKNKWKIIAKVLWWIGKAP*
Ga0150983_110160992	3300011120	Forest Soil	SQNDQIQLNGKIVIAWHKATGLTVSRLRRFDHTEVLEPENHGYEAITLGTKQRWTILAKVLWWIGKAP*
Ga0150983_117681952	3300011120	Forest Soil	DNGLMVSRLRHYDHTEVLQPENKDYESIVMNNKHKWKILAKVLWWIGKAP*
Ga0137392_102777091	3300011269	Vadose Zone Soil	ELDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRCKNVTKGLGWIAKAP*
Ga0137392_103100083	3300011269	Vadose Zone Soil	GLTVSRLNQFDHTVVLQSENASYESITLSSKQKWKIVAKVLWWIGKSP*
Ga0137391_106788232	3300011270	Vadose Zone Soil	MNLPYPRLVVDFAQNNIAKLDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASCESILFNGKQTWKIVAKVLWWIAKAP*
Ga0137391_107282092	3300011270	Vadose Zone Soil	DGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNAKQRWKIVAKVLWWIGKAP
Ga0137393_101034191	3300011271	Vadose Zone Soil	IAWHRDMGLTVSRLQHYDHTDVLQPESREHESIVLNSKHKWKIVAKVLWWIEKAP*
Ga0120134_11022212	3300012004	Permafrost	AWHKTVGLTVSRFQRYDHTEVLHPENREYEAITLDRKNHWKIIAKVLWWIGKAP*
Ga0137383_100513533	3300012199	Vadose Zone Soil	VIAWHRDKGLTVSRLNQFDHTVVLQSENVSYESITLGKQKWKIVAKVLWRIGKSP*
Ga0137383_101348673	3300012199	Vadose Zone Soil	AKLNGKVVIAWHRDMGLTVSRLQRYDHTEVLQPESRECDSIVLDSKHEWKIMGKVLWWIGNAP*
Ga0137363_101791153	3300012202	Vadose Zone Soil	AWNKDMGLMVSRLQNYDHTEVLQPENKEYESIVLNNKHKWRILARVLWWIGNAP*
Ga0137363_102437131	3300012202	Vadose Zone Soil	DKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP*
Ga0137363_115130391	3300012202	Vadose Zone Soil	KVVIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP*
Ga0137399_114137552	3300012203	Vadose Zone Soil	IAWHKDKGLTVSRLHRYDHTLVLRSENPSYEAVTLSAKQRWKIVAKVLWWIGSEP*
Ga0137399_116745381	3300012203	Vadose Zone Soil	RDMGLTVSRLQHYDHTDVLQPESREYESIVLDNKHEWKIMAKVLWWIGSAP*
Ga0137362_110950931	3300012205	Vadose Zone Soil	VIAWHKDMGLSVSRLKRYHHTEVPQPENREYESIVLDKKHSWKILAKVLWWIGRAP*
Ga0137380_100341346	3300012206	Vadose Zone Soil	VIAWHKEKGLTVSRLKRYDHTFVLQSENASYESITLNGKQRWKIVAKVLWWIGKAP*
Ga0137381_1000357011	3300012207	Vadose Zone Soil	VIAWHRDKGLTVSRLNQFDHTVVLQSENVSYESITLGKQKWKIVAKVLWWIGKSP*
Ga0137379_100204964	3300012209	Vadose Zone Soil	VIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITLNGKQRWKIVAKVLWWIGKAP*
Ga0137377_102258662	3300012211	Vadose Zone Soil	KVVIAWHRDMGLTVSRLQRYDHTEVLQPESRECDSIVLDSKHEWKIMGKVLWWIGNAP*
Ga0137377_117552562	3300012211	Vadose Zone Soil	KVVIAWHRDMGLTVSRLQRYDHTEVLQPESRECDSIVLDSKHEWKIMAKVLWWIGKAP*
Ga0137387_1000684013	3300012349	Vadose Zone Soil	VIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITLNGKQRWKIVDKVLWWIGKAP*
Ga0137386_112654662	3300012351	Vadose Zone Soil	KGLTVSRLNRFDHTIVLQSENASYESITLSGKQKWKIVARVLWWIGKAP*
Ga0137386_113067681	3300012351	Vadose Zone Soil	TVSRLKRYDHTVVLQSENASYESVTLSGKQKWKIVAKVLWWIGKAP*
Ga0137366_108666252	3300012354	Vadose Zone Soil	VIAWHRDKGLTVSRLNQFDHTVVLQSENVSYESITLGKQKWKIVAKVLWWIGKSP
Ga0137384_109162201	3300012357	Vadose Zone Soil	KGLTVSRLKRYDHTVVLQSENASYESVTLSGKQKWKIVAKVLWWIGKAP*
Ga0137384_113343772	3300012357	Vadose Zone Soil	NDHEQLLGKIVIAWNKDKGLTVSRLHRYGHIEVLQSENRVYESIVMDKNWTIVAKVLYWIGQG*
Ga0137390_103083251	3300012363	Vadose Zone Soil	ELDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNAKQRWKIVAKVLWWIGKAP*
Ga0137390_111695331	3300012363	Vadose Zone Soil	NNIGELDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASCESILFNGKQTWKIVAKVLWWIAKAP*
Ga0137358_107275062	3300012582	Vadose Zone Soil	SRLNQFDHTIVLQSENANYEAITLSGKQKWNIVAKVLWWIGKSP*
Ga0137358_110707351	3300012582	Vadose Zone Soil	GKVVIAWHRDMGLTVSRLQHYDHTDVLQPESREYESIVLDSKHEWKIMAKVLWWIGSAP*
Ga0137398_107839372	3300012683	Vadose Zone Soil	GELDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP*
Ga0137394_106778113	3300012922	Vadose Zone Soil	DRGLTVSRLNRFDHTIVLQSENSNYESITLSGNQKWKIVAKVLWWIGKSP*
Ga0137359_117211001	3300012923	Vadose Zone Soil	IVIAWNKDKGLTVSRLKSYDHTEVLQPENPGYESITLGNRNNKWKLVAKALWWIRKAS*
Ga0137413_101375441	3300012924	Vadose Zone Soil	TVSRLNRFDHTIVLQSENASYESITLSGKQKWKIVARVLWWIGKAP*
Ga0137413_102946592	3300012924	Vadose Zone Soil	VVIAWHKDKGLIVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVARVLWWIGKAP*
Ga0137416_101837001	3300012927	Vadose Zone Soil	RDKGLTVSRLNRFDHTIVLQSENASYESITLSGKQKWKIVARVLWWIGKAP*
Ga0137416_109492702	3300012927	Vadose Zone Soil	DMGLTVSRLQHYGHTDVLQAENREYESIVLDSKQDWKILAKVLWWIGTPH*
Ga0137416_110289981	3300012927	Vadose Zone Soil	KVVIAWHRDMGLTVSRLQHYDHTDVLQPESREHESIVLNSKYKWKIVAKVLWWIEKAP*
Ga0137410_110866371	3300012944	Vadose Zone Soil	MGLMVSRLQHYDHTEVLQPENKDYESIVLNNKHKWRILAKVLWWIGNAP*
Ga0126369_128983571	3300012971	Tropical Forest Soil	GKIVIAWHKDQGLTLSRFKHYHHTEILEPENHGYKSVTLSAQQRWKILAKVLCWIGKAP*
Ga0157374_105873351	3300013296	Miscanthus Rhizosphere	KDMGLMVSRLQHYDHTEVLQPENKDYESIVLNNRNKWKILAKVLWWVGNAP*
Ga0157378_110201091	3300013297	Miscanthus Rhizosphere	ELNDKIVIAWNKEMGLMVSRLHHYDHTEVLQPENKDYESIVLNNKNKWTILAKVLWWIGTAP*
Ga0181534_104166111	3300014168	Bog	TEVLHPENRDYGSTTLDRKNNWKIIARVLWWIGKAP*
Ga0137412_112438711	3300015242	Vadose Zone Soil	IGLTISRFRRFDHTEVLQPENIEYEAITLGPKQTWKIVAKVLWWVGKAP*
Ga0137403_100375558	3300015264	Vadose Zone Soil	DGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP
Ga0137403_104660163	3300015264	Vadose Zone Soil	DGKVVIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITFNSKQRWKIVAKVLWWIGKAP
Ga0182034_116623181	3300016371	Soil	NDQIQLNGKIVIAWHKDRGLTVSRFRRFDHTEVLEPENHGYEAITLGAKQRWAILAKVLWWIGMAI
Ga0182040_103031752	3300016387	Soil	QGLTVSRFKRYDHTEILEPENHGYESITLSAKQRWKILARVLWWIEKAP
Ga0187847_104174233	3300017948	Peatland	GKIVIAWHKDVGLTVSRYRRYDHTEVLHPENRDYDSMTLDRKHDWKILAKVLWWIGKAD
Ga0187822_101147161	3300017994	Freshwater Sediment	RFRRYHHTEVLHPENREYGSITMDRKNNWKIIAKVLWWIGKAP
Ga0187859_101201213	3300018047	Peatland	RYRRYDHTEVLHPENRDYESTTLDRSNNWKIVAKVLWWIGKAD
Ga0193713_10635891	3300019882	Soil	GKVVIAWHQDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIAKAP
Ga0179590_10832853	3300020140	Vadose Zone Soil	LTVSRLKRFDHTIVLQSENASYESITLSGKQKWKIVARVLWWIGKAP
Ga0210403_111775222	3300020580	Soil	DIGLTISRFRRFDHTEVLQAENAEYEAVTLGPKQTWKIVAKVLWWVGKAP
Ga0210399_100886214	3300020581	Soil	GLTVSRFRRYDHTEVLHPENREYASITLDRKNKWKIIAKVLWWIGKAP
Ga0210399_109244002	3300020581	Soil	VIAWHKDRGLTVSRLRRFDHTEVLEPENHGYEAITLGAKQRWTILAKVLWWIAMAP
Ga0210401_107618581	3300020583	Soil	SSQTDRSKLDGKIVIAWNKDRGLTVSRFKRYDHTETLQPENPQYESTTLGRKDDKWKVLAKALWWIGKAP
Ga0210400_112508662	3300021170	Soil	WHKSVGLTVSRFRRYDHTEVLHPENQEYGSITLDRRNKWKILARVLWWIGRAP
Ga0210405_104825581	3300021171	Soil	QGLTVSRFKRYDHTEILEPENHAYESITLSAKQRWKILAKVLWWIGKAP
Ga0210408_109964641	3300021178	Soil	QNDQTQLNGKIVIAWQKDRGLTVSRLRRFDHTEVLEPENHGYESITISAKHRWTILAKVLWWIAKAP
Ga0210388_107064441	3300021181	Soil	RGLTVSRLRRFDHTEVLEPENHGYEAITLGAKQRWTILAKVLWWIGKAP
Ga0210389_105466411	3300021404	Soil	QNDQTQLNGKIVIAWQKDRGLTVSRLRRFDHTEVLEPENHGYEAITLGAKQRWTILAKVLWWIAMAR
Ga0247692_10625332	3300024279	Soil	AQNDHLKMDGKVVVAWHKDRGLTVSRFRRFDQIEVLEPENNDYEAITLSAENRWEILAKVLWWIGKAP
Ga0137417_14096432	3300024330	Vadose Zone Soil	DMGLTVSRLQHYGHTDVLQAENREYESIVLDSKQDWKILAKVLWWIGTPH
Ga0208691_11143952	3300025612	Peatland	RDMGLTVSRLQRYGRTDTLQPENREYESITLDSKHKWTILAKVLWWIGKAP
Ga0207684_100145133	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VIAWHKDKGLTVSRLKRYDHTFVLQSENASYESITFNSKQRWKIVAKVLWWIGKAP
Ga0207646_114537941	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VIAFHKNTGLSVSRLKRYDHTVVLHSENTSYESITLSAKQKWKIVARVLWWIGKAP
Ga0209240_12252112	3300026304	Grasslands Soil	AKLNGKVVVAWHRDMGLTVSRLQRYDHTEVLQPESRECDSIVLDSKHEWKIMGKVLWWIGNAP
Ga0257180_10117051	3300026354	Soil	GELDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP
Ga0257167_10814352	3300026376	Soil	DRGLTVSRLNRFDHTVVLQSENTNYESITLSGKQKWKIVAKVLWWIGKSP
Ga0257168_11295322	3300026514	Soil	QNNIAKLDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP
Ga0209648_101025394	3300026551	Grasslands Soil	MSPLIQDGSILGVDYSQSDQTLLNGKIVIAWHKDRGLTVSRLRRFDHTEVLEPENHGYEAITLGVKQRWTILAKVVWWIAMAP
Ga0179587_104899021	3300026557	Vadose Zone Soil	IAWHKDKGLTVSRLQAYDHTEVLRAENSAYESIVLNKKHAWKIVAKVLWWIGKAP
Ga0207506_10048653	3300027460	Soil	SSQNDQTQLNGKIVIAWQKDRGLTVSRLRRFDHTEVLEPENHGYESITISAKHRWTILAKVLWWIAMAR
Ga0209333_10769661	3300027676	Forest Soil	VIAWHKDMGLTISRFRRYDHTEVLQPENTEYEAITLSLKQNWKIVAKVLWWVGKAP
Ga0209908_102289941	3300027745	Thawing Permafrost	MGLTVSRLERYGHTDTLQPENREYQSITLDSKHKWKILAKVLWWIGKAP
Ga0209580_103988992	3300027842	Surface Soil	HKNVGLTVSRFRRYDHTEVLHPENREYGSITMDRKNNWKIIAKVLWWIGRAP
Ga0209180_100804761	3300027846	Vadose Zone Soil	IAKLDGKVVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP
Ga0209701_100578661	3300027862	Vadose Zone Soil	AWHKDKGLTVSRLKRYDHTIVLQSENASYESITVNGKQRWKIVAKVLWWIGKAP
Ga0209701_101602171	3300027862	Vadose Zone Soil	AWHKDKGLTVSRLKRYDHTIVLQSENASYESITFNGKQRWKIVAKVLWWIGKAP
Ga0209526_104930461	3300028047	Forest Soil	DKGLTVSRLQAYDHTEVLRAENSAYESIVLNKKHSWKIVAKVLWWIGKAP
Ga0308309_106831331	3300028906	Soil	DMGLTVSRLQRYGHTDTLQPENRDYESITLDSKHKWKILAKVLWWIGKAP
Ga0311340_103227233	3300029943	Palsa	LTVSRFRTYDHTEVLHAENPKYESVTLDGRNKWKIVARVLWWIGKEA
Ga0075397_105844442	3300030845	Soil	FLYFFLQIDLDNLNGKIVIAWHKDVGLTISRFRRYDHTEVLVSENPDYEAITISAAQPWKIVATVLWWLGKAP
Ga0075386_121709002	3300030916	Soil	MLLNGKIVIAWHKDRGLTVTRLRRFDHTEALEPENHGYEAITLGAKQRWTILAKVLWWIAMAP
Ga0073998_109966461	3300031023	Soil	WHKNFGLTVSRFRRYDHTEVLHPENREYESVTLDRNNKWKIIAKVLWWIGKAP
Ga0170834_1115982351	3300031057	Forest Soil	GKIIIAWHKDRGLTVSRLRRFDHTEVLEPENHGYEAITLGAKQRWTILAKVLWWIAMAP
Ga0170823_171283872	3300031128	Forest Soil	FLQIDLDNLNGKIVIAWHKDVGLTISRFRRYDHTEVLVSENPDYEAITISAAQPWKIVATVLWWLGKAP
Ga0170824_1008688611	3300031231	Forest Soil	KIVIAWHKDRGLTVTRLRRFDHTEVLEPENHGYEAITLGAKQRWTILAKVLWWIGKAP
Ga0170824_1058316721	3300031231	Forest Soil	VIAWHRDKGLTVSRLNRFDHTIVLQSENASYESITLSGKQKWKIVARVLWWIGKAP
Ga0170824_1192513172	3300031231	Forest Soil	FRFCLIVIAWHKDVGLTISRFRRYDHTEVLVSENPDYEAITISAAQPWKIVATVLWWLGKAP
Ga0170824_1247007441	3300031231	Forest Soil	QLNGKIVIAWQKDRGLTVSRLRRFDHTEVLEPENRGYESITLSAKHRWTILAKVLWWIAKAP
Ga0302325_124382941	3300031234	Palsa	GKLDGKIVIAWKKDKGLTVSRFRRYDHTETLQPENPRYESVTLGNKSTNWKIVAKVLWWIGRAP
Ga0170820_109655591	3300031446	Forest Soil	IQLNGKIVIAWHKDRGLTVTRLRRFDHTEVLEPENHAYEAITLGAKQRWTILAKVLWWIGKAP
Ga0170819_100746701	3300031469	Forest Soil	MKLDGKIVIAWHKDEGLTVSRFKRYDHTEILEPENHGYGAITLSAKQRWQILARVLWWIGKAP
Ga0170819_170961982	3300031469	Forest Soil	LNGKIVIAWHKDRGLTVSRLRRFDHTEVLEPENHGYEAITLSAKQRWTILAKVLWWIAMA
Ga0170818_1073446181	3300031474	Forest Soil	SDQTQLNGKIVIAWQKDRGLTVSRLRRFDHTEVLEPENHGYESITISAKHRWTILAKVLWWIAKAP
Ga0307477_105914751	3300031753	Hardwood Forest Soil	SSQNDRSKLDGKFVIAWHKDMGLSVSRLKRYHHTEVLQPENRGYESIVLDKKHSWKILAKVLWWIGRAP
Ga0307475_112978751	3300031754	Hardwood Forest Soil	RFRRYDHTEVLHSENREYGSITLDRKNNWKIIAKVLWWIGRAP
Ga0307473_100745813	3300031820	Hardwood Forest Soil	NLKIVIAWHKDTGLTVSRLRRFDHTEVLEPENHAYEAITLGAKQRWTILAKVLWWIGKAP
Ga0307478_100171412	3300031823	Hardwood Forest Soil	MGLSVSRLKRYHHTEVLQPENREYESIVLDKKHSWKILAKVLWWIGRAP
Ga0307479_111664332	3300031962	Hardwood Forest Soil	AWHKDVGLTVSRFRRYDHTEVLHPENREYGSITLDRKNNWKIIATVLWWIGKAP
Ga0307470_117675932	3300032174	Hardwood Forest Soil	VVIAWHKDKGLTVSRLKRYDHTIVLQSENASYESTTLNSKQRWKIVAKVLWWIGQAP
Ga0306920_1013346072	3300032261	Soil	IVIAWHKDRGLTVSRFRRFDHTEVLEPENHGYEAITLGAKQRWAILAKVLWWIGMAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053852

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences