Basic Information | |
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Family ID | F053534 |
Family Type | Metagenome |
Number of Sequences | 141 |
Average Sequence Length | 90 residues |
Representative Sequence | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSQSER |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 141 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 73.05 % |
% of genes near scaffold ends (potentially truncated) | 39.01 % |
% of genes from short scaffolds (< 2000 bps) | 82.98 % |
Associated GOLD sequencing projects | 81 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.79 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (93.617 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (28.369 % of family members) |
Environment Ontology (ENVO) | Unclassified (60.993 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (35.461 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 64.71% β-sheet: 0.00% Coil/Unstructured: 35.29% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.79 |
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SCOP family | SCOP domain | Representative PDB | TM-score |
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f.20.1.1: Clc chloride channel | d4enea_ | 4ene | 0.64125 |
f.57.1.1: MgtE membrane domain-like | d2zy9a3 | 2zy9 | 0.62221 |
f.35.1.1: Multidrug efflux transporter AcrB transmembrane domain | d1iwga8 | 1iwg | 0.62172 |
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transporters | d3mkua_ | 3mku | 0.61051 |
a.100.1.6: Glycerol-3-phosphate dehydrogenase | d1evya1 | 1evy | 0.60898 |
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Pfam ID | Name | % Frequency in 141 Family Scaffolds |
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PF02910 | Succ_DH_flav_C | 46.81 |
PF06123 | CreD | 21.28 |
PF00753 | Lactamase_B | 7.09 |
PF10027 | DUF2269 | 4.26 |
PF01127 | Sdh_cyt | 2.13 |
PF03435 | Sacchrp_dh_NADP | 1.42 |
PF08818 | DUF1801 | 0.71 |
PF02912 | Phe_tRNA-synt_N | 0.71 |
PF00015 | MCPsignal | 0.71 |
PF03641 | Lysine_decarbox | 0.71 |
PF07332 | Phage_holin_3_6 | 0.71 |
COG ID | Name | Functional Category | % Frequency in 141 Family Scaffolds |
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COG4452 | Inner membrane protein CreD involved in colicin E2 resistance | Defense mechanisms [V] | 21.28 |
COG2009 | Succinate dehydrogenase/fumarate reductase, cytochrome b subunit | Energy production and conversion [C] | 2.13 |
COG2142 | Succinate dehydrogenase, hydrophobic anchor subunit | Energy production and conversion [C] | 2.13 |
COG0840 | Methyl-accepting chemotaxis protein (MCP) | Signal transduction mechanisms [T] | 1.42 |
COG0016 | Phenylalanyl-tRNA synthetase alpha subunit | Translation, ribosomal structure and biogenesis [J] | 0.71 |
COG1611 | Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family | Nucleotide transport and metabolism [F] | 0.71 |
COG4430 | Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family | Function unknown [S] | 0.71 |
COG5646 | Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis) | Posttranslational modification, protein turnover, chaperones [O] | 0.71 |
COG5649 | Uncharacterized conserved protein, DUF1801 domain | Function unknown [S] | 0.71 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 93.62 % |
Unclassified | root | N/A | 6.38 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2088090014|GPIPI_17415517 | Not Available | 1401 | Open in IMG/M |
3300000033|ICChiseqgaiiDRAFT_c1908485 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 549 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_100846505 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3172 | Open in IMG/M |
3300000956|JGI10216J12902_100818952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2188 | Open in IMG/M |
3300000956|JGI10216J12902_103817701 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3224 | Open in IMG/M |
3300000956|JGI10216J12902_115763055 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 598 | Open in IMG/M |
3300003312|P12013IDBA_1004163 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007 | 8505 | Open in IMG/M |
3300003312|P12013IDBA_1008536 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 5185 | Open in IMG/M |
3300004016|Ga0058689_10162551 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 523 | Open in IMG/M |
3300004114|Ga0062593_100169915 | All Organisms → cellular organisms → Bacteria | 1688 | Open in IMG/M |
3300004114|Ga0062593_101456341 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 735 | Open in IMG/M |
3300004156|Ga0062589_100910609 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 811 | Open in IMG/M |
3300004156|Ga0062589_101076378 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 758 | Open in IMG/M |
3300004463|Ga0063356_105416921 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 548 | Open in IMG/M |
3300004480|Ga0062592_100479450 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1020 | Open in IMG/M |
3300005293|Ga0065715_10014313 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 2400 | Open in IMG/M |
3300005339|Ga0070660_101392532 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 596 | Open in IMG/M |
3300005343|Ga0070687_100246103 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 1108 | Open in IMG/M |
3300005347|Ga0070668_100077472 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2599 | Open in IMG/M |
3300005347|Ga0070668_100513342 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1039 | Open in IMG/M |
3300005353|Ga0070669_100508592 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1000 | Open in IMG/M |
3300005354|Ga0070675_100150254 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1997 | Open in IMG/M |
3300005364|Ga0070673_100052685 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 3194 | Open in IMG/M |
3300005455|Ga0070663_100394670 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1130 | Open in IMG/M |
3300005457|Ga0070662_101433686 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 595 | Open in IMG/M |
3300005459|Ga0068867_100668863 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 913 | Open in IMG/M |
3300005459|Ga0068867_101426755 | All Organisms → cellular organisms → Bacteria | 643 | Open in IMG/M |
3300005543|Ga0070672_101898196 | Not Available | 536 | Open in IMG/M |
3300005548|Ga0070665_101924457 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 597 | Open in IMG/M |
3300005616|Ga0068852_102076008 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 590 | Open in IMG/M |
3300005840|Ga0068870_10856109 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 639 | Open in IMG/M |
3300005841|Ga0068863_101147830 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 782 | Open in IMG/M |
3300006169|Ga0082029_1343171 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 517 | Open in IMG/M |
3300006169|Ga0082029_1528651 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1096 | Open in IMG/M |
3300006353|Ga0075370_10280008 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 990 | Open in IMG/M |
3300006358|Ga0068871_101189242 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. | 715 | Open in IMG/M |
3300006876|Ga0079217_10288247 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 901 | Open in IMG/M |
3300007004|Ga0079218_10482519 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1089 | Open in IMG/M |
3300007004|Ga0079218_13895812 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 507 | Open in IMG/M |
3300009168|Ga0105104_10312085 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 865 | Open in IMG/M |
3300009789|Ga0126307_10222703 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1515 | Open in IMG/M |
3300009840|Ga0126313_10907525 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 719 | Open in IMG/M |
3300009840|Ga0126313_11455544 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 568 | Open in IMG/M |
3300010036|Ga0126305_10332485 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 992 | Open in IMG/M |
3300010042|Ga0126314_10484351 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. | 897 | Open in IMG/M |
3300010166|Ga0126306_10175299 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1607 | Open in IMG/M |
3300010227|Ga0136219_1002591 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2129 | Open in IMG/M |
3300010229|Ga0136218_1001107 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 4075 | Open in IMG/M |
3300012913|Ga0157298_10340032 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 548 | Open in IMG/M |
3300012915|Ga0157302_10507410 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 522 | Open in IMG/M |
3300013102|Ga0157371_11351806 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 552 | Open in IMG/M |
3300014326|Ga0157380_12321931 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 601 | Open in IMG/M |
3300014487|Ga0182000_10311757 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. | 661 | Open in IMG/M |
3300017792|Ga0163161_11718807 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 556 | Open in IMG/M |
3300018429|Ga0190272_10731682 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 897 | Open in IMG/M |
3300018466|Ga0190268_10260003 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 1006 | Open in IMG/M |
3300018481|Ga0190271_10706921 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1131 | Open in IMG/M |
3300018920|Ga0190273_10433495 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 937 | Open in IMG/M |
3300018920|Ga0190273_10518381 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 877 | Open in IMG/M |
3300019356|Ga0173481_10634036 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 567 | Open in IMG/M |
3300020202|Ga0196964_10494790 | Not Available | 597 | Open in IMG/M |
3300025903|Ga0207680_10306992 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1107 | Open in IMG/M |
3300025907|Ga0207645_10602347 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 746 | Open in IMG/M |
3300025918|Ga0207662_10658239 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 732 | Open in IMG/M |
3300025923|Ga0207681_10101273 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2078 | Open in IMG/M |
3300025923|Ga0207681_10553639 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 947 | Open in IMG/M |
3300025925|Ga0207650_10360036 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1198 | Open in IMG/M |
3300025926|Ga0207659_10884060 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SM33 | 768 | Open in IMG/M |
3300025930|Ga0207701_10413897 | Not Available | 1160 | Open in IMG/M |
3300025932|Ga0207690_10865103 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 749 | Open in IMG/M |
3300025933|Ga0207706_10517296 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1029 | Open in IMG/M |
3300025945|Ga0207679_10147479 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 1910 | Open in IMG/M |
3300025945|Ga0207679_11325097 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 661 | Open in IMG/M |
3300025960|Ga0207651_10515713 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1035 | Open in IMG/M |
3300025972|Ga0207668_10062436 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2623 | Open in IMG/M |
3300026067|Ga0207678_10824276 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 819 | Open in IMG/M |
3300026089|Ga0207648_11195014 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 714 | Open in IMG/M |
3300026095|Ga0207676_10497355 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis | 1157 | Open in IMG/M |
3300027750|Ga0209461_10057796 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 804 | Open in IMG/M |
3300027876|Ga0209974_10025161 | Not Available | 1971 | Open in IMG/M |
3300027886|Ga0209486_11057405 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 548 | Open in IMG/M |
3300028587|Ga0247828_10007305 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 3944 | Open in IMG/M |
3300028587|Ga0247828_10814152 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 593 | Open in IMG/M |
3300028589|Ga0247818_10413600 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 910 | Open in IMG/M |
3300028590|Ga0247823_10990191 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 631 | Open in IMG/M |
3300028592|Ga0247822_10004722 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 8992 | Open in IMG/M |
3300028592|Ga0247822_10259237 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1318 | Open in IMG/M |
3300028592|Ga0247822_10363582 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1120 | Open in IMG/M |
3300028592|Ga0247822_11833719 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 518 | Open in IMG/M |
3300028597|Ga0247820_10330172 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 1005 | Open in IMG/M |
3300028597|Ga0247820_10332002 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 1002 | Open in IMG/M |
3300030511|Ga0268241_10163985 | Not Available | 549 | Open in IMG/M |
3300031548|Ga0307408_100092852 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2282 | Open in IMG/M |
3300031548|Ga0307408_100134922 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1930 | Open in IMG/M |
3300031548|Ga0307408_100454790 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1111 | Open in IMG/M |
3300031548|Ga0307408_100540995 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 1026 | Open in IMG/M |
3300031548|Ga0307408_100550544 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1018 | Open in IMG/M |
3300031548|Ga0307408_101998588 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 557 | Open in IMG/M |
3300031731|Ga0307405_10976923 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 721 | Open in IMG/M |
3300031731|Ga0307405_11880105 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 534 | Open in IMG/M |
3300031824|Ga0307413_10900623 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 751 | Open in IMG/M |
(restricted) 3300031825|Ga0255338_1000015 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 769578 | Open in IMG/M |
(restricted) 3300031825|Ga0255338_1032898 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 2325 | Open in IMG/M |
3300031852|Ga0307410_10032063 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 3377 | Open in IMG/M |
3300031852|Ga0307410_10043249 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2983 | Open in IMG/M |
3300031852|Ga0307410_10093630 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2138 | Open in IMG/M |
3300031852|Ga0307410_10222166 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1454 | Open in IMG/M |
3300031852|Ga0307410_11617690 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 573 | Open in IMG/M |
3300031852|Ga0307410_11965990 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 521 | Open in IMG/M |
3300031852|Ga0307410_11995080 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 518 | Open in IMG/M |
3300031854|Ga0310904_10391341 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 908 | Open in IMG/M |
3300031901|Ga0307406_10707814 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 842 | Open in IMG/M |
3300031903|Ga0307407_10331304 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1072 | Open in IMG/M |
3300031903|Ga0307407_10430971 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 953 | Open in IMG/M |
3300031903|Ga0307407_10973909 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 654 | Open in IMG/M |
3300031911|Ga0307412_10051918 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 2713 | Open in IMG/M |
3300031911|Ga0307412_10073846 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2335 | Open in IMG/M |
3300031911|Ga0307412_12311591 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 502 | Open in IMG/M |
3300031995|Ga0307409_100207627 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1758 | Open in IMG/M |
3300031995|Ga0307409_100368101 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1362 | Open in IMG/M |
3300031995|Ga0307409_101327525 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 745 | Open in IMG/M |
3300032002|Ga0307416_100522231 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1256 | Open in IMG/M |
3300032002|Ga0307416_100550587 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1227 | Open in IMG/M |
3300032004|Ga0307414_10162800 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1774 | Open in IMG/M |
3300032004|Ga0307414_10378807 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1223 | Open in IMG/M |
3300032004|Ga0307414_10613895 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae | 977 | Open in IMG/M |
3300032004|Ga0307414_11208902 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 700 | Open in IMG/M |
3300032005|Ga0307411_10094072 | Not Available | 2100 | Open in IMG/M |
3300032005|Ga0307411_10282353 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1322 | Open in IMG/M |
3300032005|Ga0307411_10497594 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 1030 | Open in IMG/M |
3300032005|Ga0307411_10684676 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 891 | Open in IMG/M |
3300032013|Ga0310906_11009235 | Not Available | 598 | Open in IMG/M |
3300032013|Ga0310906_11469365 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 501 | Open in IMG/M |
3300032075|Ga0310890_10781771 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 754 | Open in IMG/M |
3300032075|Ga0310890_11085379 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 647 | Open in IMG/M |
3300032126|Ga0307415_100167548 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057 | 1710 | Open in IMG/M |
3300032126|Ga0307415_100442396 | Not Available | 1121 | Open in IMG/M |
3300032126|Ga0307415_100505783 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis flava | 1057 | Open in IMG/M |
3300032126|Ga0307415_101680366 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens | 612 | Open in IMG/M |
3300032144|Ga0315910_10847261 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola | 712 | Open in IMG/M |
3300033412|Ga0310810_10215244 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 2154 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 28.37% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 10.64% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 7.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.09% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 5.67% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 4.26% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.26% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.55% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 2.84% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.84% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.84% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.42% |
Ore Pile And Mine Drainage Contaminated Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil | 1.42% |
Termite Nest | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest | 1.42% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.42% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 1.42% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.42% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.42% |
Agave | Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave | 1.42% |
Soil | Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil | 1.42% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 0.71% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.71% |
Soil | Environmental → Terrestrial → Soil → Sand → Desert → Soil | 0.71% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.71% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.71% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.71% |
Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.71% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.71% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.71% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.71% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2088090014 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300003312 | Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P1 sample | Environmental | Open in IMG/M |
3300004016 | Agave microbial communities from Guanajuato, Mexico - As.Ma.rz | Host-Associated | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300006169 | Termite nest microbial communities from Madurai, India | Environmental | Open in IMG/M |
3300006353 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Host-Associated | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006876 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 | Environmental | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300009168 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
3300010166 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27 | Environmental | Open in IMG/M |
3300010227 | Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2 | Engineered | Open in IMG/M |
3300010229 | Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1 | Engineered | Open in IMG/M |
3300012913 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2 | Environmental | Open in IMG/M |
3300012915 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2 | Environmental | Open in IMG/M |
3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014487 | Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG | Environmental | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300018920 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS | Environmental | Open in IMG/M |
3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
3300020202 | Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10 | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027750 | Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes) | Host-Associated | Open in IMG/M |
3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) | Host-Associated | Open in IMG/M |
3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
3300028589 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1 | Environmental | Open in IMG/M |
3300028590 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30 | Environmental | Open in IMG/M |
3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
3300028597 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14 | Environmental | Open in IMG/M |
3300030511 | Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2) | Environmental | Open in IMG/M |
3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
3300031825 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195 | Environmental | Open in IMG/M |
3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Host-Associated | Open in IMG/M |
3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Host-Associated | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Host-Associated | Open in IMG/M |
3300032144 | Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
GPIPI_02917920 | 2088090014 | Soil | LNETPLWLAYLVSAVAAYLLVVKLGWRIVPSILAGAFVSVVGWGLLYSLTAEDLRPSFWRVDLSLNISFAVIFAGAGAAIGFATRGRQEP |
ICChiseqgaiiDRAFT_19084851 | 3300000033 | Soil | HRRHQVHQXEGARVLNETXLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLXASFALIFAGAGAAIAFAMKSNQSER* |
INPhiseqgaiiFebDRAFT_1008465052 | 3300000364 | Soil | LNETPLWLAYLVSAVAAYLLVVKLGWRIVPSILAGAFVSVVGWGLLYSLTAEDLRPSFWRVDLSLNISFAVIFAGAGAAIGFATRGRQEP* |
JGI10216J12902_1008189521 | 3300000956 | Soil | SLVHQAEGPRVLNETWLWLAYLASALAAYLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP* |
JGI10216J12902_1038177012 | 3300000956 | Soil | LNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFALKSREAE* |
JGI10216J12902_1157630551 | 3300000956 | Soil | ETLLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHS* |
P12013IDBA_10041637 | 3300003312 | Ore Pile And Mine Drainage Contaminated Soil | LNETLLWLLYLLSAAAAFAAVFRLGWRIVPAMLAGTAVTLVGWLLMYLTAKESRPAFWEVDLSLNASFALIFAGAGAAFGFFRRGRTNV* |
P12013IDBA_10085362 | 3300003312 | Ore Pile And Mine Drainage Contaminated Soil | LNETLLWLLYLLSAGAAFLAVQRGGSRLVPAILAGTFVTIAGWALLYALAGEDERPDFWQVDLSLNASFAMVFAAAGAAIAFAIKSRQPD* |
Ga0058689_101625511 | 3300004016 | Agave | LNETLLWLAYLASGVAAFLLVAKLGLRIVPSILAGSFVSVVAWGLLYLFTAEELRPSFWRVDLSLSVSFAVIFAGAGAAIGFATRGRQAP* |
Ga0062593_1001699152 | 3300004114 | Soil | LNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE* |
Ga0062593_1014563412 | 3300004114 | Soil | LNETLLWLLYLVSAVVAFAAVHRLGWRIVPSILAGALVTSIGWGLLYLVTAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRPSD* |
Ga0062589_1009106092 | 3300004156 | Soil | LNETLLWLLYMVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAGIAFAMK |
Ga0062589_1010763782 | 3300004156 | Soil | RLHAHGRGPVHQAQGPRVLNETLLWLLYLVSAVVAFAAVHRLGWRIVPSILAGALVTSIGWGLLYLVTAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRPSD* |
Ga0063356_1054169211 | 3300004463 | Arabidopsis Thaliana Rhizosphere | LNETLLWLLYLVSAVFGFIAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE* |
Ga0062592_1004794502 | 3300004480 | Soil | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER* |
Ga0065715_100143132 | 3300005293 | Miscanthus Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH* |
Ga0070660_1013925322 | 3300005339 | Corn Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSQSER* |
Ga0070687_1002461031 | 3300005343 | Switchgrass Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSGR* |
Ga0070668_1000774723 | 3300005347 | Switchgrass Rhizosphere | TLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE* |
Ga0070668_1005133421 | 3300005347 | Switchgrass Rhizosphere | LNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP* |
Ga0070669_1005085922 | 3300005353 | Switchgrass Rhizosphere | LNETLLWLLYLVSAIVAFLTVKKLGWRIVPSMLAGAFVSVLGWGAMFLLAAEDSRPAFWRLDLSMNASFGLIFAGAGAAIAFAMKSREAN* |
Ga0070675_1001502542 | 3300005354 | Miscanthus Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAGIAFAMKSSRSEH* |
Ga0070673_1000526852 | 3300005364 | Switchgrass Rhizosphere | LNETWLWLAYLASAVAAFLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP* |
Ga0070663_1003946702 | 3300005455 | Corn Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER* |
Ga0070662_1014336862 | 3300005457 | Corn Rhizosphere | RVLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP* |
Ga0068867_1006688632 | 3300005459 | Miscanthus Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTILGWVLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER* |
Ga0068867_1014267552 | 3300005459 | Miscanthus Rhizosphere | LNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAF |
Ga0070672_1018981961 | 3300005543 | Miscanthus Rhizosphere | LNETILWLLYAFGAVVAYAAVQKLGWRIVPSTLVGMIPTLLGWGLLYLLTAEDDRPAWWRLDLSMNLSFALIFAACGA |
Ga0070665_1019244572 | 3300005548 | Switchgrass Rhizosphere | LNETLLWLLYLVSAVTAFLTVRRLGWRISPSMLAGAAVTAVGWAIIYALTSEENRPEFWRVDLSLNASFALIFAGAGAALAFALKNREPDS* |
Ga0068852_1020760081 | 3300005616 | Corn Rhizosphere | AHRRHQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER* |
Ga0068870_108561092 | 3300005840 | Miscanthus Rhizosphere | AAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSQSER* |
Ga0068863_1011478302 | 3300005841 | Switchgrass Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSSRSEH* |
Ga0082029_13431711 | 3300006169 | Termite Nest | HRRGLVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSILAGALLTAIGWALLYLVTAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRRSD* |
Ga0082029_15286512 | 3300006169 | Termite Nest | LNETLLWLLYLVSAVTAFLTVQKRGWRIVPSMLAGTLVTVVGWLLIFALTAEDKRPPFWRLDLSLNASFALIFAGAGAALAFALRQREER* |
Ga0075370_102800082 | 3300006353 | Populus Endosphere | MNETLLWLLYLVSAVVAFLAIQKLDWRIVPSILAGTFVSIVGWGLIFALTAQDDRPAFWRLDLSMNASFALIFAGAGAAIAFALKSREAS* |
Ga0068871_1011892422 | 3300006358 | Miscanthus Rhizosphere | LNEALLWLLYLISGAVAFLAVHKLSWRIVPSILGGAFVTAIGWGLLYLVIAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRHSD* |
Ga0079217_102882472 | 3300006876 | Agricultural Soil | LNETLLWLLYLVSAVVAFLAVQKFGWRLVPSMLAGTLVTVLGWLLIYLLTAEAKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE* |
Ga0079218_104825192 | 3300007004 | Agricultural Soil | LNETLLWLLYLVSAVVAFVTVQKLGWRLVPSMFAGTLVTVLGWLVIYLLTVEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE* |
Ga0079218_138958121 | 3300007004 | Agricultural Soil | LNETLLWLLYLVSAVVAFLTVQKLGWRIVPSIFAGTAVSVVGWALLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKSRESHN* |
Ga0105104_103120851 | 3300009168 | Freshwater Sediment | LNETLLWLLYLISAVIAFLTVQKLGWRIVPSMFAGTAVSVVGWVLLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKGREPHN* |
Ga0126307_102227032 | 3300009789 | Serpentine Soil | LNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE* |
Ga0126313_109075251 | 3300009840 | Serpentine Soil | GARILNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE* |
Ga0126313_114555442 | 3300009840 | Serpentine Soil | LNETLLWLLYLVSAAVAFFTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE* |
Ga0126305_103324852 | 3300010036 | Serpentine Soil | LNETLLWLLYLVSAAVAFFTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREVE* |
Ga0126314_104843512 | 3300010042 | Serpentine Soil | LNETLLWLLYLVSAAVAFFTVQNLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKQPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE* |
Ga0126306_101752991 | 3300010166 | Serpentine Soil | LNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTVEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE* |
Ga0136219_10025913 | 3300010227 | Soil | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTILGWVLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH* |
Ga0136218_10011072 | 3300010229 | Soil | LNETLLWLLYLVSAAVAFLTVQKLSWRIVPSMLAGTVVTTVGWGMIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH* |
Ga0157298_103400321 | 3300012913 | Soil | YLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE* |
Ga0157302_105074102 | 3300012915 | Soil | LNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE* |
Ga0157371_113518061 | 3300013102 | Corn Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMKSNQSER* |
Ga0157380_123219312 | 3300014326 | Switchgrass Rhizosphere | LNEILLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMK |
Ga0182000_103117572 | 3300014487 | Soil | LNETLLWLLYLVSAVVAFLAVQRLGWRLVPSMLAGTIVTVLGWLPIFLLTAQDKRPPFWRLDLSLNASFALIFAAAGAALAFAMKDREAR* |
Ga0163161_117188072 | 3300017792 | Switchgrass Rhizosphere | LNEALLWLLYLISGAVAFLAVHKLSWRIVPSILGGAFVTAIGWGLLYLVIAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRHSD |
Ga0190272_107316822 | 3300018429 | Soil | LNETLLWLLYLVSAVVAFLTVQKLGWRIVPSIFAGTAVSVVGWALLYALAAEEKRPEFWRLDLSLNASFALIFAGAGAALAFALKSREPHN |
Ga0190268_102600031 | 3300018466 | Soil | LNETLLWLLYLVSAVTAFLTVQKLGWRIVPSMFAGTAVTIVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN |
Ga0190271_107069212 | 3300018481 | Soil | LNETLLWLLYMVSAVVGFLAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE |
Ga0190273_104334951 | 3300018920 | Soil | AEGARILNETLLWLLYLVSAVTAFLTVRNLGWRIVPSMLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN |
Ga0190273_105183812 | 3300018920 | Soil | LNETLLLLLYLVSAVTAFLTVRKLGWRIVPSTLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKS |
Ga0173481_106340361 | 3300019356 | Soil | LNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE |
Ga0196964_104947902 | 3300020202 | Soil | LSETLLWLLYVAGAAAACAAVYRLGWKIVPSTLAATAITVVGWAALYFLADEEKRPSFWEVDLSLNACFALIFAGAGAALGLFLASRERAG |
Ga0207680_103069921 | 3300025903 | Switchgrass Rhizosphere | AFLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP |
Ga0207645_106023472 | 3300025907 | Miscanthus Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER |
Ga0207662_106582392 | 3300025918 | Switchgrass Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSGR |
Ga0207681_101012732 | 3300025923 | Switchgrass Rhizosphere | LNETWLWLAYLASAVAAFLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGWKAP |
Ga0207681_105536392 | 3300025923 | Switchgrass Rhizosphere | LNETLLWLLYLVSAIVAFLTVKKLGWRIVPSMLAGAFVSVLGWGAMFLLAAEDSRPAFWRLDLSMNASFGLIFAGAGAAIAFAMKSREAN |
Ga0207650_103600362 | 3300025925 | Switchgrass Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWSLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER |
Ga0207659_108840602 | 3300025926 | Miscanthus Rhizosphere | RLHAHRRHQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAGIAFAMKSSRSEH |
Ga0207701_104138972 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | LNETILWLLYLVGAAVAFAAVHKFDWRIVPSTVAGTVPTLLGWGVLYLLTAEDKRPNWWRVDLSLNLSLALIFAACGAAL |
Ga0207690_108651032 | 3300025932 | Corn Rhizosphere | GPRVLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP |
Ga0207706_105172962 | 3300025933 | Corn Rhizosphere | RVLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP |
Ga0207679_101474792 | 3300025945 | Corn Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH |
Ga0207679_113250971 | 3300025945 | Corn Rhizosphere | LNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFA |
Ga0207651_105157132 | 3300025960 | Switchgrass Rhizosphere | LNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP |
Ga0207668_100624363 | 3300025972 | Switchgrass Rhizosphere | TLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE |
Ga0207678_108242762 | 3300026067 | Corn Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVAIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER |
Ga0207648_111950142 | 3300026089 | Miscanthus Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTILGWVLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH |
Ga0207676_104973553 | 3300026095 | Switchgrass Rhizosphere | EGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH |
Ga0209461_100577962 | 3300027750 | Agave | LNETLLWLAYLASGVAAFLLVAKLGLRIVPSILAGSFVSVVAWGLLYLFTAEELRPSFWRVDLSLSVSFAVIFAGAGAAIGFATRGRQAP |
Ga0209974_100251611 | 3300027876 | Arabidopsis Thaliana Rhizosphere | LNETLLWLLYLVSAVVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIF |
Ga0209486_110574051 | 3300027886 | Agricultural Soil | LNETLLWLLYLVSAVVAFVTVQKLGWRLVPSMFAGTLVTVLGWLVIYLLTVEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMK |
Ga0247828_100073051 | 3300028587 | Soil | LNETLLWLLYLVSAVVGFLAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE |
Ga0247828_108141521 | 3300028587 | Soil | LNETLLWLLYLVSAAVGFVAVHRLGWRLVPSMLAGTLVTVVAWLPIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFALKDREAE |
Ga0247818_104136001 | 3300028589 | Soil | LYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE |
Ga0247823_109901911 | 3300028590 | Soil | LVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD |
Ga0247822_100047227 | 3300028592 | Soil | LNETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD |
Ga0247822_102592372 | 3300028592 | Soil | LNETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWGMIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD |
Ga0247822_103635822 | 3300028592 | Soil | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMKSNQSER |
Ga0247822_118337191 | 3300028592 | Soil | PRLHTHRRGPVHQAEGARILNETLLWLLYLVSAVVGFLAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKDREAE |
Ga0247820_103301721 | 3300028597 | Soil | PRLHAHRRDQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMKSNQSER |
Ga0247820_103320022 | 3300028597 | Soil | PVHQAEGARILNETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD |
Ga0268241_101639851 | 3300030511 | Soil | LNETILWLLYVVGAAVAFAAVHKLGWRIVPSTIAGTVPTFLGWGLIYLLTAEDKRPAWWRVDLSLNLSFALIFAACG |
Ga0307408_1000928521 | 3300031548 | Rhizosphere | LYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDERPAFWRLDLSMNASFALIFAGAGAAIAFAMKSSQSAD |
Ga0307408_1001349222 | 3300031548 | Rhizosphere | LNETLLWLLYLVSAVTAFLTVKKLGWRIVPSMLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN |
Ga0307408_1004547902 | 3300031548 | Rhizosphere | LNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSSQSAD |
Ga0307408_1005409952 | 3300031548 | Rhizosphere | LNETLIWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQ |
Ga0307408_1005505442 | 3300031548 | Rhizosphere | LNETLLWLLYLVSALVAFLAVQKLGWRIVPSIFAGTAVSVVGWALLYALAADENRPEFWRLDLSLNASFALIFAGAGAALAFALKSREPHN |
Ga0307408_1019985881 | 3300031548 | Rhizosphere | NETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKNREAE |
Ga0307405_109769231 | 3300031731 | Rhizosphere | LNETLLWLLYLASAAVAFLTVQKLGWRIVPSMLAGTIVTIIGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER |
Ga0307405_118801051 | 3300031731 | Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE |
Ga0307413_109006231 | 3300031824 | Rhizosphere | AVHQAEGARILNETLLWLLYLVSAAVAFFTVQKLAWRFVPSMLAGTLVTVLGWLMIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE |
(restricted) Ga0255338_1000015592 | 3300031825 | Sandy Soil | LNETLLWLLYLVSAAVAFLTVQKLSWRIVPSMLAGTVVTIVGWGMIFLLTAEDKRPVFWRLDLSLNASFALIFAGAGAAIAFAMKYNQSDR |
(restricted) Ga0255338_10328982 | 3300031825 | Sandy Soil | LNETLLWLLYLVSAAVAFLTVQKLSWRIVPSMLAGTVVTIVGWGLIFLLTAEEKRPAFWRLDLSLNASFALIFAGAGAAMAFAMKSSRSEH |
Ga0307410_100320631 | 3300031852 | Rhizosphere | LNETLLWLLYLVSAVVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYVLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE |
Ga0307410_100432493 | 3300031852 | Rhizosphere | LNETLLWLLYLVSAVTAFLTVKKLGWRIVPSMLAGTAVTVLGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN |
Ga0307410_100936301 | 3300031852 | Rhizosphere | LYLVSAAVAFLTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE |
Ga0307410_102221662 | 3300031852 | Rhizosphere | LNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKNREAE |
Ga0307410_116176901 | 3300031852 | Rhizosphere | RRGSVHQAEGARILNETLLWLLYLVSAVVAFLAVQRLGWRIVPSIFAGTAVSVVGWALLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKSRDPHN |
Ga0307410_119659901 | 3300031852 | Rhizosphere | LNETLLWLLYLVSAVVGFLSVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRLDLSLNASFALIFAGAGAALAFALKNREAE |
Ga0307410_119950802 | 3300031852 | Rhizosphere | LNETILWLLYLVGAVAAFHAVQRLQWRIVPSMLGGTMVTVAGWAVMYLLTGAEDRPPFWQLDLSLNASFALIFAGAGAALAFALPHLKRR |
Ga0310904_103913412 | 3300031854 | Soil | TWLWLAYLASAVAAFLLVMKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP |
Ga0307406_107078142 | 3300031901 | Rhizosphere | LNETLLWLLYLVSAVVAFLTVQKLGWRIVPSIFAGTAVSVVGWALLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKSREPHN |
Ga0307407_103313042 | 3300031903 | Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLDWRIVPSMLAGTVVTIVGWGMIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER |
Ga0307407_104309712 | 3300031903 | Rhizosphere | PRLHAHRRDQVHQAESARVLNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIALAMKSSQSAD |
Ga0307407_109739091 | 3300031903 | Rhizosphere | LNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLLIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE |
Ga0307412_100519182 | 3300031911 | Rhizosphere | LNETLLWLLYLVSALIAFLAVQKLGWRIVPSIFAGTAVSVVGWAFLYALAAEENRPEFWRLDLSLNASFALVFAGAGAALAFALKSRDPHN |
Ga0307412_100738462 | 3300031911 | Rhizosphere | LNETLLWLLYLVSAAVAFFAVQKLGWRIVPSMLAGTVVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAATALAMKSSQSAD |
Ga0307412_123115912 | 3300031911 | Rhizosphere | LNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRLDLSLNASFALIFAGAGAALAFALKNREAE |
Ga0307409_1002076272 | 3300031995 | Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTIVTIIGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER |
Ga0307409_1003681012 | 3300031995 | Rhizosphere | SVHQAEGARILNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKNREAE |
Ga0307409_1013275251 | 3300031995 | Rhizosphere | LNETLLWLLYLVSAAVAFFTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE |
Ga0307416_1005222312 | 3300032002 | Rhizosphere | LNETLIWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSER |
Ga0307416_1005505871 | 3300032002 | Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGQRIVPSMLVGTLLTVVGWALLYLLTAEDKRPPYWRVDLTLNASFALIFAGAGAALALVMRNREAE |
Ga0307414_101628001 | 3300032004 | Rhizosphere | ETLLWLLYLVSAAVAFFTVQKLAWRFVPSMLAGTLVTVLGWLMIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE |
Ga0307414_103788072 | 3300032004 | Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTIVTIIGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER |
Ga0307414_106138952 | 3300032004 | Rhizosphere | LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAGIAFAMKSSRSEH |
Ga0307414_112089021 | 3300032004 | Rhizosphere | LNETLFWLLYLVSAVTAFLMVQKLGWRIVPSMLAGTAVTIVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREP |
Ga0307411_100940721 | 3300032005 | Rhizosphere | LNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAG |
Ga0307411_102823532 | 3300032005 | Rhizosphere | LNETLLWLLYLVSAAVAFFAVQKLGWRIVPSMLAGTVVTMVGWGLIFLLTAEDRRPAFWRLDLSMNASFALIFAGAGAAIALAMKSSQSAD |
Ga0307411_104975941 | 3300032005 | Rhizosphere | RLHADRRGRVHQAEGARILNETILWLLYLVGAVAAFHAVQRLQWRIVPSMLGGTMVTVAGWAVMYLLTGAEDRPPFWQLDLSLNASFALIFAGAGAALAFALPHLKRR |
Ga0307411_106846762 | 3300032005 | Rhizosphere | FLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER |
Ga0310906_110092352 | 3300032013 | Soil | LNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFW |
Ga0310906_114693651 | 3300032013 | Soil | HQAKGARILNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE |
Ga0310890_107817711 | 3300032075 | Soil | LNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKA |
Ga0310890_110853791 | 3300032075 | Soil | LNETLLWLLYLVSAVVGFIAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE |
Ga0307415_1001675482 | 3300032126 | Rhizosphere | LNETLLWLLYLASAVVAFLAVHRFGTRIVPAMIIGTLVTGFGWIPLYFLTSEELRPDFWRVDFSLNVCFGLIFAGAGAAIAFFMATRREGVVRRNEGSD |
Ga0307415_1004423962 | 3300032126 | Rhizosphere | LNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDERPAFWRLDLSMNASFALIFA |
Ga0307415_1005057833 | 3300032126 | Rhizosphere | RHQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAGIAFAMKSSRSEH |
Ga0307415_1016803661 | 3300032126 | Rhizosphere | LNETILWLLYLVGAVAAFQAVQRLQWRIVPAMLGGTMITVAGWAVMYLLTGAEDRPPFWQLDLSLNASFALIFAGAG |
Ga0315910_108472611 | 3300032144 | Soil | ETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWGMIFLLTAEEKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD |
Ga0310810_102152441 | 3300033412 | Soil | LNETLLWLLYMVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH |
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