Metagenome / Metatranscriptome Family F053378

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053378
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	67 residues
Representative Sequence	MWLLIVYVGLVLVGDVADYLIGLFVERMWGPQASLVVFLALYFIFLWVAWVVAVKITEPRAEPKVA
Number of Associated Samples	102
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.98 %
% of genes near scaffold ends (potentially truncated)	19.86 %
% of genes from short scaffolds (< 2000 bps)	79.43 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.830 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.277 % of family members)
Environment Ontology (ENVO)	Unclassified (37.589 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.518 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.51% β-sheet: 0.00% Coil/Unstructured: 41.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
f.13.1.3: Amine receptor-like	d2rh1a1	2rh1	0.75197
f.34.1.1: Mechanosensitive channel protein MscS (YggB), transmembrane region	d2vv5a3	2vv5	0.74953
f.13.1.0: automated matches	d7l1vr_	7l1v	0.74172
f.13.1.0: automated matches	d6n4br_	6n4b	0.7349
f.13.1.0: automated matches	d5c1ma_	5c1m	0.73276

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00929	RNase_T	10.64
PF00890	FAD_binding_2	8.51
PF00089	Trypsin	7.80
PF07896	DUF1674	2.84
PF00009	GTP_EFTU	2.13
PF13620	CarboxypepD_reg	1.42
PF13505	OMP_b-brl	1.42
PF00565	SNase	1.42
PF00226	DnaJ	0.71
PF02770	Acyl-CoA_dh_M	0.71
PF03952	Enolase_N	0.71
PF02518	HATPase_c	0.71
PF12762	DDE_Tnp_IS1595	0.71
PF00239	Resolvase	0.71
PF01970	TctA	0.71
PF04964	Flp_Fap	0.71
PF01435	Peptidase_M48	0.71
PF00486	Trans_reg_C	0.71
PF05598	DUF772	0.71
PF04070	DUF378	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG5508	Uncharacterized conserved protein, DUF1674 domain	Function unknown [S]	2.84
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.71
COG1784	TctA family transporter	General function prediction only [R]	0.71
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.71
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.71
COG2155	Uncharacterized membrane protein YuzA, DUF378 family	Function unknown [S]	0.71
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.71
COG3333	TctA family transporter	General function prediction only [R]	0.71
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.54 %
Unclassified	root	N/A	35.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.54 %
Unclassified	root	N/A	35.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.83 %
Unclassified	root	N/A	35.46 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.72 %
Unclassified	root	N/A	35.46 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.13 %
Nanoarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota	0.71 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.89 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	1.42 %
unclassified Nanoarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota	0.71 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.46 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	7.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.84 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	1.42 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	0.71 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.71 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.71 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	1.42 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.71 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.71 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	0.71 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.80 %
unclassified Acinetobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter	1.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.71 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.71 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	0.71 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.80 %
Acinetobacter sp. Marseille-Q1618	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter → Acinetobacter sp. Marseille-Q1618	1.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
Edaphocola	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Edaphocola	0.71 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.71 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	0.71 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.80 %
Acinetobacter sp. Marseille-Q1618	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter → Acinetobacter sp. Marseille-Q1618	1.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.42 %
Edaphocola flava	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Edaphocola → Edaphocola flava	0.71 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.71 %
Nanoarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	0.71 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_105100302	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Edaphocola → Edaphocola flava	526	Open in IMG/M
3300002568\|C688J35102_120951035	All Organisms → cellular organisms → Bacteria → Proteobacteria	2901	Open in IMG/M
3300003324\|soilH2_10308729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1343	Open in IMG/M
3300004778\|Ga0062383_10162001	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300004779\|Ga0062380_10279290	Not Available	700	Open in IMG/M
3300005332\|Ga0066388_100007577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7986	Open in IMG/M
3300005332\|Ga0066388_100023696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5498	Open in IMG/M
3300005332\|Ga0066388_100040141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4609	Open in IMG/M
3300005332\|Ga0066388_100069850	All Organisms → cellular organisms → Bacteria	3810	Open in IMG/M
3300005332\|Ga0066388_100077658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3670	Open in IMG/M
3300005332\|Ga0066388_100696873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1623	Open in IMG/M
3300005332\|Ga0066388_101514106	Not Available	1174	Open in IMG/M
3300005332\|Ga0066388_101803485	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005332\|Ga0066388_102448417	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005332\|Ga0066388_103970424	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005332\|Ga0066388_104219213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	733	Open in IMG/M
3300005337\|Ga0070682_100671412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	827	Open in IMG/M
3300005434\|Ga0070709_11732625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter → Acinetobacter sp. Marseille-Q1618	510	Open in IMG/M
3300005555\|Ga0066692_10340898	Not Available	951	Open in IMG/M
3300005561\|Ga0066699_10873148	Not Available	629	Open in IMG/M
3300005569\|Ga0066705_10771252	Not Available	575	Open in IMG/M
3300005615\|Ga0070702_100724357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → unclassified Acinetobacter → Acinetobacter sp. Marseille-Q1618	761	Open in IMG/M
3300005713\|Ga0066905_100076544	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300005713\|Ga0066905_100404687	Not Available	1108	Open in IMG/M
3300005713\|Ga0066905_100777532	Not Available	828	Open in IMG/M
3300005713\|Ga0066905_101457349	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_100117743	All Organisms → cellular organisms → Bacteria	3677	Open in IMG/M
3300005764\|Ga0066903_100139341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3443	Open in IMG/M
3300005764\|Ga0066903_101072703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1482	Open in IMG/M
3300005833\|Ga0074472_10338544	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300005833\|Ga0074472_11195499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6988	Open in IMG/M
3300005833\|Ga0074472_11389693	All Organisms → cellular organisms → Bacteria → Proteobacteria	2204	Open in IMG/M
3300005983\|Ga0081540_1124182	Not Available	1065	Open in IMG/M
3300006195\|Ga0075366_10777596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	595	Open in IMG/M
3300006755\|Ga0079222_10247083	Not Available	1118	Open in IMG/M
3300006844\|Ga0075428_102203150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300006845\|Ga0075421_102312598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300006846\|Ga0075430_100169103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1818	Open in IMG/M
3300006854\|Ga0075425_100116066	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300006871\|Ga0075434_100374561	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300006969\|Ga0075419_10043092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2825	Open in IMG/M
3300007255\|Ga0099791_10356251	Not Available	701	Open in IMG/M
3300007788\|Ga0099795_10138162	Not Available	989	Open in IMG/M
3300009090\|Ga0099827_10644354	Not Available	914	Open in IMG/M
3300009143\|Ga0099792_10004487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5549	Open in IMG/M
3300009147\|Ga0114129_11437349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	850	Open in IMG/M
3300009792\|Ga0126374_10143443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1436	Open in IMG/M
3300010036\|Ga0126305_10402657	Not Available	902	Open in IMG/M
3300010038\|Ga0126315_10012475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4071	Open in IMG/M
3300010040\|Ga0126308_10138632	Not Available	1527	Open in IMG/M
3300010041\|Ga0126312_10623055	Not Available	776	Open in IMG/M
3300010042\|Ga0126314_10574332	Not Available	821	Open in IMG/M
3300010043\|Ga0126380_10977311	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010046\|Ga0126384_10498054	Not Available	1050	Open in IMG/M
3300010046\|Ga0126384_10772202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300010046\|Ga0126384_11143807	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010046\|Ga0126384_11721371	Not Available	593	Open in IMG/M
3300010047\|Ga0126382_10006753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5267	Open in IMG/M
3300010047\|Ga0126382_10062860	Not Available	2238	Open in IMG/M
3300010047\|Ga0126382_11305901	All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon	656	Open in IMG/M
3300010166\|Ga0126306_11183476	Not Available	628	Open in IMG/M
3300010358\|Ga0126370_10387325	Not Available	1143	Open in IMG/M
3300010359\|Ga0126376_10006029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7289	Open in IMG/M
3300010359\|Ga0126376_10563157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300010359\|Ga0126376_10917602	Not Available	868	Open in IMG/M
3300010359\|Ga0126376_11369079	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300010359\|Ga0126376_13212844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300010360\|Ga0126372_10139254	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300010362\|Ga0126377_10013033	Not Available	6575	Open in IMG/M
3300010362\|Ga0126377_10225634	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300010362\|Ga0126377_10362493	Not Available	1449	Open in IMG/M
3300010362\|Ga0126377_10572921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300010362\|Ga0126377_11149076	Not Available	846	Open in IMG/M
3300010362\|Ga0126377_11817789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300010362\|Ga0126377_12532600	Not Available	589	Open in IMG/M
3300010366\|Ga0126379_10326702	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300010366\|Ga0126379_12808916	Not Available	582	Open in IMG/M
3300010397\|Ga0134124_10089470	Not Available	2661	Open in IMG/M
3300010398\|Ga0126383_13073112	Not Available	545	Open in IMG/M
3300010403\|Ga0134123_10306107	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300011431\|Ga0137438_1206330	Not Available	597	Open in IMG/M
3300012199\|Ga0137383_10800337	Not Available	688	Open in IMG/M
3300012204\|Ga0137374_10065232	All Organisms → cellular organisms → Bacteria → Proteobacteria	3625	Open in IMG/M
3300012206\|Ga0137380_10320755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1385	Open in IMG/M
3300012207\|Ga0137381_10241072	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300012212\|Ga0150985_100108931	Not Available	718	Open in IMG/M
3300012212\|Ga0150985_105196660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1011	Open in IMG/M
3300012285\|Ga0137370_10959668	Not Available	527	Open in IMG/M
3300012349\|Ga0137387_10264630	Not Available	1241	Open in IMG/M
3300012349\|Ga0137387_10627784	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300012355\|Ga0137369_10342714	Not Available	1094	Open in IMG/M
3300012359\|Ga0137385_10701665	Not Available	845	Open in IMG/M
3300012360\|Ga0137375_10053823	All Organisms → cellular organisms → Bacteria → Proteobacteria	4370	Open in IMG/M
3300012362\|Ga0137361_10571913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300012532\|Ga0137373_10530360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	896	Open in IMG/M
3300012685\|Ga0137397_10003745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10612	Open in IMG/M
3300012925\|Ga0137419_11192908	Not Available	637	Open in IMG/M
3300012929\|Ga0137404_10354761	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300012930\|Ga0137407_10188323	Not Available	1845	Open in IMG/M
3300012948\|Ga0126375_10708607	Not Available	785	Open in IMG/M
3300012948\|Ga0126375_11152787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300012971\|Ga0126369_12561870	Not Available	595	Open in IMG/M
3300012971\|Ga0126369_13099322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300012987\|Ga0164307_11640003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	545	Open in IMG/M
3300014969\|Ga0157376_10350739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1412	Open in IMG/M
3300015241\|Ga0137418_10147453	All Organisms → cellular organisms → Bacteria → Proteobacteria	2076	Open in IMG/M
3300015264\|Ga0137403_10002488	All Organisms → cellular organisms → Bacteria	22541	Open in IMG/M
3300015371\|Ga0132258_12142343	Not Available	1405	Open in IMG/M
3300015374\|Ga0132255_104151001	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300017997\|Ga0184610_1254975	Not Available	583	Open in IMG/M
3300018027\|Ga0184605_10350268	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300018028\|Ga0184608_10022340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	2309	Open in IMG/M
3300018053\|Ga0184626_10280195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	695	Open in IMG/M
3300018054\|Ga0184621_10149928	Not Available	840	Open in IMG/M
3300018072\|Ga0184635_10089722	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300018075\|Ga0184632_10328579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300018076\|Ga0184609_10094990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1333	Open in IMG/M
3300018468\|Ga0066662_11499147	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300020170\|Ga0179594_10133738	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300022756\|Ga0222622_10821679	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300022756\|Ga0222622_11118972	Not Available	579	Open in IMG/M
3300025936\|Ga0207670_11260775	Not Available	626	Open in IMG/M
3300026067\|Ga0207678_11552986	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300026088\|Ga0207641_10165496	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300026377\|Ga0257171_1083940	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300027512\|Ga0209179_1022923	Not Available	1229	Open in IMG/M
3300027735\|Ga0209261_10002212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5242	Open in IMG/M
3300027735\|Ga0209261_10127347	Not Available	670	Open in IMG/M
3300027778\|Ga0209464_10119865	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300027831\|Ga0209797_10250950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	743	Open in IMG/M
3300027873\|Ga0209814_10351784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300027907\|Ga0207428_10387210	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300028536\|Ga0137415_10305529	All Organisms → cellular organisms → Bacteria → Proteobacteria	1395	Open in IMG/M
3300028796\|Ga0307287_10202940	Not Available	753	Open in IMG/M
3300031058\|Ga0308189_10024228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1467	Open in IMG/M
3300031184\|Ga0307499_10287226	Not Available	537	Open in IMG/M
3300031740\|Ga0307468_100720544	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300032174\|Ga0307470_10038353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2350	Open in IMG/M
3300032180\|Ga0307471_100795145	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300032205\|Ga0307472_100783572	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300033550\|Ga0247829_10634030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	889	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.23%
Host-Associated	Host-Associated	12.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.05%
Aquatic	Environmental → Aquatic	14.18%
Plants	Host-Associated → Plants	12.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.05%
Sediment	Environmental → Aquatic → Sediment	9.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.80%
Freshwater	Environmental → Aquatic → Freshwater	4.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.26%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.03%
Loam	Environmental → Terrestrial → Soil → Loam	17.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.09%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.71%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.67%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	4.26%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.84%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.42%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1051003021	3300000559	Soil	MWLLIVYVALVLVGDVADYMIGLVVERMWGPQASLVVFLALYFVFLXXXXVVAVKITQPRAEPKVA*
C688J35102_1209510353	3300002568	Soil	MWLLIVYVGLVLVGDVVDYLIGLVVEQMWGQQASLVVFLALYFIFLWVAWVAAVKITEPRAEPKVA*
soilH2_103087293	3300003324	Sugarcane Root And Bulk Soil	MWLLIVYIGLVLVGDAIDYVIGLAVEQMWGAQASLVVFLVLYFVFLWVAWLVAVKVTEPRGEAKVA*
Ga0062383_101620012	3300004778	Wetland Sediment	MWLLIVYLVLVIVGDVADYLIGLFVERMWGSQASLIVFLALYFLFLWLAWIAAVKITAPRVEAKAAA*
Ga0062380_102792901	3300004779	Wetland Sediment	MWLLIVYLALVIVGDLADYLIGLFVERMWGSQASLIVFLALYFLFLWLAWVAAVKITAPREEAKAAA*
Ga0066388_1000075779	3300005332	Tropical Forest Soil	MYLLVLYVGLVLVGDIIDYLIGLFVERMWGSQASLVVFLALYFIFLWVAWVVAVKLTEPKSEAKTA*
Ga0066388_1000236967	3300005332	Tropical Forest Soil	MYLLIVYIALVLVGDLIDYFIGLFVERMWGPQASLVVFLALYFIFLWVAWVVAVKITEPRGEAKAAA*
Ga0066388_1000401413	3300005332	Tropical Forest Soil	VLASGRTVAQGETNVWLLIVYVALVMLGDIADYLIGLVVERMWGPQISLVVFLALYFLFLWLAWVVAVMITKPSPTERPAQA*
Ga0066388_1000698503	3300005332	Tropical Forest Soil	MWLLIVYIGLVLVGDVADYLIGLAVERMWGAQASLVVFLLLYFVFLWVAWVVAVKITEPRAEPKVA*
Ga0066388_1000776584	3300005332	Tropical Forest Soil	VYLLIVYIALVLVGDIADYLIGLAVERMWGSQASLVVFLLLYFALLWVAWVLAVKLTEPRDVASAPAR*
Ga0066388_1006968731	3300005332	Tropical Forest Soil	MWLLIVYVGLVLVGDVADYLIGLFVERMWGPQASLVVFLALYFIFLWVAWVVAVKITEPSAEPKVA*
Ga0066388_1015141062	3300005332	Tropical Forest Soil	MYLLIVYIALVLVGDVIDYFIGLFVERMWGQQASLVVFLALYFIFLWVAWVVAVKITEPRAEAKTA*
Ga0066388_1018034852	3300005332	Tropical Forest Soil	VYLLIVYIVLMLVGDAVDYLVGLAVERMWGPQASLIVFLVLYFVSLWVAWVVAVKITEPRIASAPAR*
Ga0066388_1024484172	3300005332	Tropical Forest Soil	MWLLIVYVALVLVGDVADYLIGLVVERMWGQQASLVVFLALYFVFLWVAWVVAVKITEPPAEPKTA*
Ga0066388_1039704242	3300005332	Tropical Forest Soil	MWLLIVYIALVLVGDVADYLIGLAVERMWGSQASLVVFLLLYFVFLWVAWVAAVKLTAPRDEAKTA*
Ga0066388_1042192131	3300005332	Tropical Forest Soil	VWLLIVYLVLVILGDVADYAISLMVEQMWGWQASLIVFLALYFLFLYVAWVAAVKLTEPRGAAARA*
Ga0070682_1006714121	3300005337	Corn Rhizosphere	CYQWGPKRPAAGETNTMWLLIVYVGLVLVGDLADYLIGLFVERMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPSAEPKTA*
Ga0070709_117326251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MWLLIVYVGLVLVGDLADYLIGLFVERMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPSAEPKTA*
Ga0066692_103408982	3300005555	Soil	MYLLVLYVGLVLVGDIIDYLIGLFVERMWGSQASLVVFLALYFIFLWVAWVLAVKLTEPRGETKAA*
Ga0066699_108731482	3300005561	Soil	MWLLIVYVGLVLVGDIADYLIGLVVEQMWGPQASLVVFLALYFIFLWVAWVVAVKITEPPAEPKTA*
Ga0066705_107712522	3300005569	Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGPQASLVVFLALYFIFLWVAWVVAVKITEPPAEPKIA*
Ga0070702_1007243572	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MWLLIVYVGLVLVGDVADYLIGLFVEQMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPSAEPKTA*
Ga0066905_1000765441	3300005713	Tropical Forest Soil	MYLLVLYVGLVLVGDIIDYLIGLFVERMWGSQASLVVFLALYFIFLWVAWVVAVKLTEPRDETKTA*
Ga0066905_1004046871	3300005713	Tropical Forest Soil	VWLLIVYLVLVILGDVADYAISLMVEQMWGSQASLIVFLALYFVFLYVAWVAAVKLTEPRGAAARA*
Ga0066905_1007775321	3300005713	Tropical Forest Soil	MWLLIVYIALVLVGDVADYLIGLAVERMWGSQASLVVFLLLYFVFLWVAWVAAVKLTAPRDETKTA*
Ga0066905_1014573491	3300005713	Tropical Forest Soil	MYLLIVYVGLVLVGDVADYLIGLVIERMWGPQASLVVFLALYFTFLWVAWVAAVKITEPRGEPKTA*
Ga0066903_1001177432	3300005764	Tropical Forest Soil	MYLLIVYIALVLVGDLIDYFIGLFVERMWGPQASLVVFLALYFIFLWVAWVVAVKITEPRGEAKTA*
Ga0066903_1001393412	3300005764	Tropical Forest Soil	MYLLIIYVGLVLVGDIADYLIGLVVERLWGSQASLVVFLALYFLFLWVAWVVAVKITEPPREQPKTA*
Ga0066903_1010727032	3300005764	Tropical Forest Soil	VQLLAYYVVFMVLGDLASYLIGLFVERMWPQASLVVFLALYFFFLWLAWVLAVKVTEPKKELAPAPAR*
Ga0074472_103385442	3300005833	Sediment (Intertidal)	MWLLIVYLALVIVGDIADYMIGLVIESMWGSQASLVVFLLLYFVFLYVAWVAAVKITEPRAVAKAA*
Ga0074472_111954999	3300005833	Sediment (Intertidal)	MWLLIVYLVLVIVGDVADYLIGLFVERMWGSQASLIVFLALYFLFLWLAWIAAVKITAPRVEAKAA*
Ga0074472_113896934	3300005833	Sediment (Intertidal)	MWLLIVYLVLVVLGQFAGYLIGLLVEHMWGMQASLIAFLALYFVFMWVAWVGAVKITAPRAVAKAA*
Ga0081540_11241821	3300005983	Tabebuia Heterophylla Rhizosphere	MWLLIVYIGLVLVGDVADYLIGLAVERMWGPQASLIVFLGLYFVFLWVAWVVAVKLTEPRDEAKAA*
Ga0075366_107775962	3300006195	Populus Endosphere	YIGLVLVGDAIDYVIGLAVERMWGPQASLVVFLVLYFVFLWIAWLVAVKITEPRGEAKVA
Ga0079222_102470832	3300006755	Agricultural Soil	MWLLIVYVGLVLVGDIADYLIGLFVEQMWGQQASLVVFLVLYFVFLWVAWVAAVKITQPSPEPKTA*
Ga0075428_1022031502	3300006844	Populus Rhizosphere	VWLLSIYVVLMIVGDVADYLIGLLVERVWPEASLAVFLGLYFLFLWLAWVAAVKLTEPKKPVEAQGAAPH*
Ga0075421_1023125981	3300006845	Populus Rhizosphere	RRGDAIHHRSGIVWLLSIYVVLMIVGDVADYLIGLLVERVWPEASLAVFLGLYFLFLWLAWVAAVKLTEPKKPVEAQGAAPH*
Ga0075430_1001691033	3300006846	Populus Rhizosphere	VWLLSIYVVLMIVGDVADYLIGLLVERVWPEASLAIFLGLYFLFLWLAWVAAVKLTEPKKPVEAQGAAPH*
Ga0075425_1001160666	3300006854	Populus Rhizosphere	VWLIIVYLVLMVLGDIADYLIGLVIERLWGQQVSLIVFLVLYFLFLWFSWLGAVKLTEPRKAATASPA
Ga0075434_1003745613	3300006871	Populus Rhizosphere	MWLLIVYIGLVLVGDAIDYVIGLAVERMWGPQASLVVFLVLYFVFLWIAWLVA
Ga0075419_100430924	3300006969	Populus Rhizosphere	VWLLSIYVVLMIVGDVADYLIGLLVERVWPEASLADFLGLYFLFLWLAWVAAVKLTEPKKPVEAQGAAPH*
Ga0099791_103562512	3300007255	Vadose Zone Soil	ARSGLRAGGDNTMWLLIVYVGLVLVGDVADYLIGLVVEQMWGSQASLVVFLALYFIFLWVAWVAAVKITEPRAEPKIA*
Ga0099795_101381622	3300007788	Vadose Zone Soil	MWLLIVYVGLVLVGDIADYLIGLVVEQMWGQQASLVVFLALYFVFLWVAWVVAVKITEPPAEPKVA*
Ga0099827_106443542	3300009090	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGQQASLVVFLALYFIFLWLAWVVAVKI
Ga0099792_100044877	3300009143	Vadose Zone Soil	MWLLIVYVGLVLVGDIADYLIGLVVEQMWGQQASLVVFLARYFVFLWVAWVVAVKITEPPAEPKVA*
Ga0114129_114373492	3300009147	Populus Rhizosphere	VWLLIIYVGLMLLGDIADYLIGLVVERMWGSQVSLIVFLVLYFVFLWLAWVAAVKLTEPRDAASAAR*
Ga0126374_101434432	3300009792	Tropical Forest Soil	MWLLIVYIGLVLVGDIADYLIGLFVERMWGQQASLVVFLALYFLFLWVAWVVAVKITEPRDETKTA*
Ga0126305_104026573	3300010036	Serpentine Soil	VGLLIVYVALVILGDVAAYLIGLSVEYYRPQLSLPIFLFLYFFFLWVAWVAAVKITAPRHAASTAAT*
Ga0126315_100124754	3300010038	Serpentine Soil	VGLLIVYVALVILGDVAAYLIGLGVEYYRPQLSLPIFLFLYFFFLWVAWVAAVKITAPRHGASTAAT*
Ga0126308_101386325	3300010040	Serpentine Soil	VGLLIVYVALVILGDVAAYLIGLGVEHYRPQLSLPIFLFLYFFFLWVAWVAAVKITAPRHAASTAAT*
Ga0126312_106230552	3300010041	Serpentine Soil	VGLLIVYVALVILGDVAAYLIGLSVEYYRPQLSLPIFLFLYFFFLWVAWVAAVKITAPRHGASTAAT*
Ga0126314_105743321	3300010042	Serpentine Soil	VGLLIVYVALVILGDVAAYLIGLGVEHYRPQLSLPIFLFLYFFFLWVAWVAAVKITAPRHGASTAAT*
Ga0126380_109773112	3300010043	Tropical Forest Soil	MWLLIVYIALVLVGDVADYLIGLAVERMWGAQASLIVFLALYFIFLWVAWVVAVKVPGPRDETKTA*
Ga0126384_104980541	3300010046	Tropical Forest Soil	AALGPGRQATMYLLVLYVGLVLVGDIIDYLIGLFVERMWGSQASLVVFLALYFIFLWVAWVVAVKLTEPRDETKTA*
Ga0126384_107722022	3300010046	Tropical Forest Soil	MYLLIVYVGLVLVGDVADYLIGLVIERMWGAQASLVIFLALYFIFLWVAWVVAVKITEPRGEPKTA*
Ga0126384_111438071	3300010046	Tropical Forest Soil	MWLLIVYIALVLVGDIADYLIGLAVERMWGPQASLIVFLALYFVFLWVAWVVAVKLTEPRDETKTA*
Ga0126384_117213712	3300010046	Tropical Forest Soil	LNGWQHTGEKSAVWLLIVYVGLVVVGDVADYLIGLVVERMWGQEASLVVFLLLYFLFLWIAWVVAVKITEPRAEIAPAQH*
Ga0126382_100067531	3300010047	Tropical Forest Soil	MYLLIVYVGLVLVGDVADYLIGLVIERMWGPQASLVVFLALYFTFLWLAWVVA
Ga0126382_100628602	3300010047	Tropical Forest Soil	MYLLIVYIGLVLVGDLIDYFIGLFVERMWGPQASLVVFLALYFIFLWVAWVVAVKLTEPRDEVKTA*
Ga0126382_113059011	3300010047	Tropical Forest Soil	MYLLIVYIALVLVGDVIDYFIGLFVERMWGPQASLVAFLALYFIFLWVAWVVAVKITEPRGDAKTA*
Ga0126306_111834761	3300010166	Serpentine Soil	VGLLIVYVALVIVGDVAAYLIGLSVEHYRPQLSLPIFLFLYFFFLWVAWVAAVKITAPR
Ga0126370_103873252	3300010358	Tropical Forest Soil	MYLLIIYVGLVLVGDIADYLIGLVVERMWGSQASLVVFLALYFLFLWVAWVVAVKITEPPREQPKTA*
Ga0126376_100060298	3300010359	Tropical Forest Soil	MWLLIVYVGLVLVGDIADYLIGLFVERMWGPQASLVVFLALYFVFLWVAWVVAVKITEPRAEPKVA*
Ga0126376_105631571	3300010359	Tropical Forest Soil	MWLLIVYIALVLVGDVADYLIGLAVERMWGPQASLIVFLALYFVFLWVAWVVAVKLTEPRDETKTA*
Ga0126376_109176022	3300010359	Tropical Forest Soil	MYLLIVYVGLVLVGDVADYLIGLVIERMWGPQASLVVFLALYFTFLWLAWVVAVKITEPRGEPKTA*
Ga0126376_113690792	3300010359	Tropical Forest Soil	MWLLIVYIALVLVGDVADYLIGLAVERMWGAQASLVVFLLLYFVFLWVAWVVAVKITEPRAEPKVA*
Ga0126376_132128441	3300010359	Tropical Forest Soil	MWLLIVYIGLVLVGDAIDYIIGLAVERMWGPQASLVVFLVLYFVFLWIAWLVAVKVTEPRGEAKVA*
Ga0126372_101392544	3300010360	Tropical Forest Soil	MWLLIVYVGLVLVGDVADYLIGLFVERMWGPQASLVVFLALYFIFLWVAWVVAVKITEPRAEPKVA*
Ga0126377_100130334	3300010362	Tropical Forest Soil	MWLLIVYIALVLVGDVADYIIGLAVERMWGQQASLVVFLLLYFVFLWVAWVVAVKLTAPRDETKTA*
Ga0126377_102256342	3300010362	Tropical Forest Soil	VWLLIVYLVLVILGDVADYAISLMVEQMWGSQASLIVFLALYFLFLYVAWVAAVKLTEPRGAAARA*
Ga0126377_103624932	3300010362	Tropical Forest Soil	MYLLIVYIALVLVGDIADYLIGLFVERMWGSQASLVVFLALYFIFLWVAWVVAVKVTEPRSEAKTA*
Ga0126377_105729212	3300010362	Tropical Forest Soil	MWLLIVYIALVLVGDVADYLIGLAVERMWGPQASLIVFLGLYFLFLWVAWVVAVKLTEPRDETKTA*
Ga0126377_111490762	3300010362	Tropical Forest Soil	VWLLIVYVALVMLGDIADYLIGLVVERMWGPQISLVVFLALYFLFLWLAWVVAVMITKPSPTERPAQA*
Ga0126377_118177891	3300010362	Tropical Forest Soil	MYLLIVYVGLVLVGDVADYLIGLVIERMWGAQASLVIFLALYFVFLWVAWVVAVKITEPRGEPKTA*
Ga0126377_125326002	3300010362	Tropical Forest Soil	GPGRQATMYLLVLYVGLVLVGDIIDYLIGLFVERMWGSQASLVVFLALYFIFLWVAWVVAVKLTEPKSEAKTA*
Ga0126379_103267021	3300010366	Tropical Forest Soil	MYLLIIYVGLVLVGDIADYLIGLVVERLWGSQASLVVFLALYFLFLWVAWVVAEKITEPPREQPKTA*
Ga0126379_128089162	3300010366	Tropical Forest Soil	MWLMVVYVGLVIVGDVADYLIGLVVEQMWGPQASLVVFLALYFIFLWVAWVVAVKITAPPAEAKTA*
Ga0134124_100894701	3300010397	Terrestrial Soil	MWLLIVYVGLVLVGDVADYLIGLFVERMWGQQASLVVFLALYFVFLWVAWVAAVKITQPSAEPKVA*
Ga0126383_130731122	3300010398	Tropical Forest Soil	MYLLIIYVGLVLVGDIADYLIGLVVERMWGSQASLVVFLALYFLFLWVAWVVAVKI
Ga0134123_103061072	3300010403	Terrestrial Soil	MWLLIVYVGLVLVGDLADYLIGLFVERMWGQQASLVVFLVLYFVFLWVAWVAAVKLTEPPAEPKVA*
Ga0137438_12063301	3300011431	Soil	MWLLVIYIALMLTGQGASYLIGLFVERMWGQQASLIVFLALYFLILWLAWVVAVKLTAPRAAFVAKRT*
Ga0137383_108003372	3300012199	Vadose Zone Soil	IVYVGLVLVGDVADYLIGLVVEQMWGQQASLVVFLALYFIFLWLAWVVAVKITEPPAEPKTA*
Ga0137374_100652324	3300012204	Vadose Zone Soil	VWLLIIYVGLVLVGDVADYLIGLAVERMWGSQASLVVFLALYFVLLWAAWVAAVKITAPRGAGSAPAR*
Ga0137380_103207553	3300012206	Vadose Zone Soil	MWLLIVYVGLVLVGDVVDYLIGLLVEQMWGAQASLVVFLALYFVFLWLAWVVAVKITEPPAEPKTA*
Ga0137381_102410721	3300012207	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGQQASLVVFLALYFIFLWLAWVVAVKITEPPAEPKTA*
Ga0150985_1001089312	3300012212	Avena Fatua Rhizosphere	GRRDSTMWLLIVYVGLVLVGDVADYLIGLVVEQMWGAQASLVVFLVLYFLFLWVAWVAAVKITEPRAEPKVA*
Ga0150985_1051966603	3300012212	Avena Fatua Rhizosphere	MELEAAFRAGGDNTMWLLIVYVGLVLVGDVADYLIGLVVEQMWGQQASLVVFLALYFIFLWVAWVAAVKITEPRAEPKVA*
Ga0137370_109596681	3300012285	Vadose Zone Soil	ADVLPMGSRSGLQAGETNTMWLLIVYVGLVLVGDVADYLIGLVVEQMWGPQASLVVFLALYFIFLWVAWVVAVKITEPPAEPKTA*
Ga0137387_102646302	3300012349	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGPQASFVVFLALYFIFLWLAWVVAVKITEPPAEPKTA*
Ga0137387_106277841	3300012349	Vadose Zone Soil	MWLLIVYVGLVLVGDLADYLIGLVVEQMWGAQASLVVFLVLYFVFLWVAWVVAVKITEPRAEPKVA*
Ga0137369_103427141	3300012355	Vadose Zone Soil	VWLLIIYVGLVLVGDVADYLIGLAVERMWGSQASLVVFLALYFVLLWLAWVAAVKITEPRRIASAPAR*
Ga0137385_107016652	3300012359	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGPQASLVVFLALYFIFLWLAWVVAVKITEPPAEPKTA*
Ga0137375_100538236	3300012360	Vadose Zone Soil	VWLLIIYVGLVLVGDVADYLIGLAVERMWGSQASLVVFLALYFVLLWLAWVAAVKITEPRRSASAPAR*
Ga0137361_105719132	3300012362	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGSQASLVVFLALYFIFLWVAWVVAVKITEPRAEPKVA*
Ga0137373_105303601	3300012532	Vadose Zone Soil	WLLIIYVGLVLVGDVADYLIGLAVERMWGSQASLVVFLALYFVLLWSAWVAAVKITAPRGAGSAPAR*
Ga0137397_1000374511	3300012685	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGSQASLVVFLALYFIFLWVAWVAAVKITEPRAEPKIA*
Ga0137419_111929082	3300012925	Vadose Zone Soil	GLVLVGDVADYLIGLVVEQMWGQQASLVVFLVLYFLFLWVAWVAAVKITEPPAEPKVV*
Ga0137404_103547613	3300012929	Vadose Zone Soil	MWLLIVYIGLVLVGDVADYLIGLVVEQMWGQQASLVVFLALYFIFLWVAWVAAVKITEPRAEPKIA*
Ga0137407_101883234	3300012930	Vadose Zone Soil	MWLLIVYIGLVLVGDVADYLIGLVVEQMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPRAEPKIA*
Ga0126375_107086072	3300012948	Tropical Forest Soil	YIGLVLVGDLIDYFIGLFVERMWGPQASLVVFLALYFIFLWVAWVVAVKLTEPRDEVKTA
Ga0126375_111527871	3300012948	Tropical Forest Soil	MYLLIVYVGLVLVGDVADYLIGLVIERMWGPQASLVIFLALYFIFLWVAWVVAVKITEPRGEPKTA*
Ga0126369_125618701	3300012971	Tropical Forest Soil	MWLLIVYVGLVIVGDIADYLIGLVVEQMWGSQASLVVFLALYFIFLWVAWVVAVKITEPGAEPKTV*
Ga0126369_130993221	3300012971	Tropical Forest Soil	MALKRPGGRGDNTMWLLIVYIGLVLVGDVADYLIGLVVEQMWGQQASLVIFLVLYFVFLWVAWVVAVKITEPPAEPKVA*
Ga0164307_116400031	3300012987	Soil	VWLIIVYLVLMILGDIADYLIGLVIERVWGQQVSLIVFLVLYFLFLWFSWLGAVKLTEPRKAGMASPAA*
Ga0157376_103507393	3300014969	Miscanthus Rhizosphere	PKRPAAGETNTMWLLIVYVGLVLVGDLADYLIGLFVERMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPSAEPKTA*
Ga0137418_101474531	3300015241	Vadose Zone Soil	VGLVLVGDVADYLIGLVVERMWGPQASLVVFLALYFIFLWVAWVVAVKITEPPAEPKVV*
Ga0137403_1000248813	3300015264	Vadose Zone Soil	MWLLIVYVGLVLVGDLADYLIGLVVEQMWGAQASLVVFLALYFIFLWVAWVVAVKITEPRAEPKVA*
Ga0132258_121423431	3300015371	Arabidopsis Rhizosphere	MWLLIVYVGLVLVGDVADYLIGLFVERMWGQQASLVVFLALYFVFLWVAWVAAVKITQPSA*
Ga0132255_1041510011	3300015374	Arabidopsis Rhizosphere	MWLLIVYIGLVLVGDAIDYVIGLAVERMWGPQASLVVFLVLYFVFLWIAWLVAVKITEPRGEAKAA*
Ga0184610_12549751	3300017997	Groundwater Sediment	MLLIIYFVALVLIGDLSAYFIGLAVERMWGSQASLLVFLALYFVTLYVAWILAVWLTKPKVAAALPTGG
Ga0184605_103502681	3300018027	Groundwater Sediment	MWLLIVYIGLVLVGDVADYLIGLVVEQMWGAQASLVVFLVLYFVFLWVAWVAAVKITEPRAEPKIA
Ga0184608_100223403	3300018028	Groundwater Sediment	MWLLIVYIGLVLVGDVADYLIGLVVEQMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPRAEPKIA
Ga0184626_102801952	3300018053	Groundwater Sediment	MWLLIVYIALVLVGDAADYLIGLFIEQMFGPQVSLVVFLVLYFVFLWVAWVAAVKITAPRGEAKAAA
Ga0184621_101499281	3300018054	Groundwater Sediment	MGSKRLEGRGDDTMWLLIVYIGLVLVGDVADYLIGLVVEQMWGQQASLVVFLVLYFVFLWVAWVAA
Ga0184635_100897222	3300018072	Groundwater Sediment	MWLLIVYIALVLVGDAVDYLIGLFIEQMWGSQASLVVFLALYFVFLWVAWVAAVKITAPRGEAKAAA
Ga0184632_103285792	3300018075	Groundwater Sediment	VWLLSIYVVLMIVGDVADYLIGLLVERVWPEASLAIFLGLYFLFLWLAWVAAVKLTEPKKPVEAAGAAPH
Ga0184609_100949902	3300018076	Groundwater Sediment	MWLLIVYIALVLVGDAADYLIGLFIEQMWGPQVSLVVFLVLYFVFLWVAWVAAVKITAPRGEAKAAA
Ga0066662_114991472	3300018468	Grasslands Soil	MYLLVLYVGLVLVGDIIDYLIGLFVERMWGSQASLVVFLALYFVFLWVAWVVAVKLTEPRGETKTA
Ga0179594_101337382	3300020170	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGSQASLVVFLALYFIFLWVAWVVAVKITEPRAEPKVA
Ga0222622_108216791	3300022756	Groundwater Sediment	MWLLIVYVALVLVGDVADYLIGLVVERMWGPQASLVVFLLLYFVFLWVAWVAAVKITQPRAEPKIA
Ga0222622_111189722	3300022756	Groundwater Sediment	VGRGDNTMWLLIVYIGLVLVGDVADYLIGLVVEQMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPRAEPKIA
Ga0207670_112607751	3300025936	Switchgrass Rhizosphere	MWLLIVYVGLVLVGDLADYLIGLFVERMWGQQASLVVFLGLYFVFLWVAWVAAVKITEPSAEPKT
Ga0207678_115529862	3300026067	Corn Rhizosphere	VGLVLVGDLADYLIGLFVERMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPSAEPKTA
Ga0207641_101654963	3300026088	Switchgrass Rhizosphere	MWLLIVYVGLVLVGDLADYLIGLFVERMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPSAEPKTA
Ga0257171_10839401	3300026377	Soil	MWLLIVYVGLVLVGDIVDYLIGLVVEQMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPSAEPKTA
Ga0209179_10229233	3300027512	Vadose Zone Soil	MWLLIVYVGLVLVGDIADYLIGLVVEQMWGQQASLVVFLALYFVFLWVAWVVAVKITEPPAEPKVA
Ga0209261_100022125	3300027735	Wetland Sediment	MWLLIVYLVLVIVGDVADYLIGLFVERMWGSQASLIVFLALYFLFLWLAWIAAVKITAPRVEAKAAA
Ga0209261_101273472	3300027735	Wetland Sediment	SGVLPIDLKAAAGPVETRTMWLLIVYLALVIVGDLADYLIGLFVERMWGSQASLIVFLALYFLFLWLAWVAAVKITAPREEAKAAA
Ga0209464_101198651	3300027778	Wetland Sediment	MWLLIVYLVLVIVGDVADYLIGLFVERMWGSQASLIVFLALYFLFLWLARIAAVKITAPRVEAKAAA
Ga0209797_102509501	3300027831	Wetland Sediment	MWLLIVYLALVIVGDLADYLIGLFVERMWGSQASLIVFLALYFLFLWLAWVAAVKITAPREEAKAAA
Ga0209814_103517841	3300027873	Populus Rhizosphere	VWLLSIYVVLMIVGDVADYLIGLLVERVWPEASLAIFLGLYFLFLWLAWVAAVKLTEPKKPVEAQGAAPH
Ga0207428_103872101	3300027907	Populus Rhizosphere	MWLLIVYIGLVLVGDAIDYVIGLAVERMWGPQASLVVFLVLYFVFLWIAWLVAVKITEPRGEAKVA
Ga0137415_103055293	3300028536	Vadose Zone Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGQQASLVVFLALYFIFLWLAWVVAVKITEPPAEPKTA
Ga0307287_102029401	3300028796	Soil	MGSKRLEGRGDDTMWLLIVYIGLVLVGDVADYLIGLVVEQMWGQQASLVVFLVLYFVFLWVAWVAAVKITEPRTEPKIA
Ga0308189_100242281	3300031058	Soil	VEGSVWLLCVYVVLMIVGDVADYLIGLVVERIWGPQASLVVFLVLYFLFLWISWVVAVRVTKPEAQPVRA
Ga0307499_102872261	3300031184	Soil	MWLLIVYVGLVLVGDVADYLIGLVVEQMWGQQASLVVFLALYFIFLWAAWVVAVKITEPPAEAKVA
Ga0307468_1007205441	3300031740	Hardwood Forest Soil	MWLLIVYIGLVLVGDAVDYLIGLAVERMWGAQASLVVFLLLYFVFLWVAWVAAVKITEPRAEPKVA
Ga0307470_100383533	3300032174	Hardwood Forest Soil	MWLLIVYIGLVLVGDVVDYLIGLAVERMWGAQASLVVFLLLYFVFLWVAWVAAVKITEPRAEPKVA
Ga0307471_1007951452	3300032180	Hardwood Forest Soil	MWLLIVYIALVLVGDAADYLIGLAVERMWGSQASLVVFLLLYFVFLWVAWVAAVKITEPRAEAKTA
Ga0307472_1007835721	3300032205	Hardwood Forest Soil	MWLLIVYIGLVLVGDVVDYLIGLAVERMWGAQASLVVFLLLYFVFLWVAWVAAVKITEPRAEAKTA
Ga0247829_106340301	3300033550	Soil	VWLLTIYVVLMIVGDVADYLIGLVVERIWPEASLAIFLGLYFLFLWLAWVAAVKLTEPRKPLAEGAASH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053378

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences