NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F053149

Metagenome / Metatranscriptome Family F053149

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053149
Family Type Metagenome / Metatranscriptome
Number of Sequences 141
Average Sequence Length 97 residues
Representative Sequence MRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSDW
Number of Associated Samples 102
Number of Associated Scaffolds 141

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.60 %
% of genes near scaffold ends (potentially truncated) 26.95 %
% of genes from short scaffolds (< 2000 bps) 83.69 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (52.482 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.894 % of family members)
Environment Ontology (ENVO) Unclassified
(23.404 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.681 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122
12208726491
2JGI10216J12902_1053346912
3C688J35102_1191767811
4soilL1_100420613
5Ga0058897_111586662
6Ga0066677_103951602
7Ga0066680_100426533
8Ga0066673_103024532
9Ga0066688_100245421
10Ga0066684_101598302
11Ga0066671_103213771
12Ga0066675_108060221
13Ga0070703_105032102
14Ga0070714_1009520592
15Ga0070705_1000110995
16Ga0070700_1015161371
17Ga0070708_1003190602
18Ga0070708_1008823881
19Ga0066687_103247571
20Ga0070681_100376284
21Ga0070681_117370802
22Ga0070706_1000450041
23Ga0070707_1005548742
24Ga0070707_1012303632
25Ga0070707_1019365862
26Ga0070741_1000525311
27Ga0070741_100117009
28Ga0070741_100628525
29Ga0070741_101751473
30Ga0070704_1018470991
31Ga0066661_100582591
32Ga0066699_102058981
33Ga0070664_1016408421
34Ga0068856_1015004071
35Ga0066696_100084951
36Ga0066660_110286301
37Ga0079215_102839942
38Ga0079216_104446091
39Ga0079216_115138121
40Ga0079219_112705751
41Ga0079218_100478791
42Ga0079218_104790131
43Ga0079218_114300313
44Ga0066710_1003288892
45Ga0066710_1038559391
46Ga0105248_127888842
47Ga0126323_11401982
48Ga0126321_14218402
49Ga0134122_104220932
50Ga0150983_118908672
51Ga0137382_105391792
52Ga0137363_110937162
53Ga0150985_1007676372
54Ga0150985_1011446001
55Ga0150985_1014654022
56Ga0150985_1026191441
57Ga0150985_1058641531
58Ga0150985_1139725191
59Ga0134040_11236531
60Ga0134048_10012511
61Ga0134053_10525792
62Ga0150984_1033289003
63Ga0150984_1110759641
64Ga0137416_112125652
65Ga0137416_114946022
66Ga0137404_100552792
67Ga0137404_107569172
68Ga0137410_108971411
69Ga0134087_103830382
70Ga0157372_118723161
71Ga0134081_103785721
72Ga0132258_138796691
73Ga0184618_103325932
74Ga0184639_105831071
75Ga0190265_105643601
76Ga0190265_116616161
77Ga0190265_124362431
78Ga0190265_131968162
79Ga0190272_103278601
80Ga0190272_111564801
81Ga0190272_113076542
82Ga0190272_113458852
83Ga0066667_108658251
84Ga0190269_101570052
85Ga0190268_102007592
86Ga0190268_103323021
87Ga0066662_113580681
88Ga0190264_101024412
89Ga0190264_103829931
90Ga0190264_104420011
91Ga0187892_105509181
92Ga0206356_116552171
93Ga0206355_14204021
94Ga0206355_15447941
95Ga0179594_104326591
96Ga0196958_100077213
97Ga0196959_100233482
98Ga0196959_101183312
99Ga0196959_101861482
100Ga0242648_10599832
101Ga0242660_11121871
102Ga0242660_12345512
103Ga0196962_100051053
104Ga0196962_100147103
105Ga0209640_114088652
106Ga0207653_103755491
107Ga0207684_111950071
108Ga0207646_112930081
109Ga0207711_117944871
110Ga0207661_104477572
111Ga0207667_108146301
112Ga0209027_11955552
113Ga0209239_12262871
114Ga0209473_12786212
115Ga0209267_12202182
116Ga0209805_14014652
117Ga0256866_10132592
118Ga0209486_104843862
119Ga0247707_10244962
120Ga0247717_10204441
121Ga0137415_103413983
122Ga0307504_100739402
123Ga0299907_100915372
124Ga0299907_101583712
125Ga0299907_110755091
126Ga0073997_122183931
127Ga0299913_100643642
128Ga0307408_1004710692
129Ga0307408_1021414811
130Ga0307469_109617132
131Ga0307405_111212391
132Ga0307468_1008497181
133Ga0307473_105481192
134Ga0307411_113298052
135Ga0307471_1000147233
136Ga0307471_1001462374
137Ga0334913_147435_3_272
138Ga0372943_0036511_2445_2690
139Ga0372943_0406326_250_543
140Ga0372943_0735822_151_474
141Ga0334931_181916_219_476
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.98%    β-sheet: 16.67%    Coil/Unstructured: 56.35%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSDWSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
52.5%47.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Grasslands Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Sugarcane Root And Bulk Soil
Soil
Grasslands Soil
Sub-Biocrust Soil
Soil
Hardwood Forest Soil
Soil
Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Soil
Soil
Bio-Ooze
Speleothem And Rock Wall Surfaces
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
14.9%6.4%3.5%2.8%5.7%9.9%4.3%5.0%3.5%9.2%4.3%4.3%2.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
22087264912199352033Speleothem And Rock Wall SurfacesMRVVVWGTGVVESRMLWEQAEATEEAAHLAETLSLAWDDVAGPLRWAVEIECPEPDDVLRLVEETSGDDSVLGWSPAPRDVPADWFMVDEDEEENLPLEW
JGI10216J12902_10533469123300000956SoilMRIVVWGNGIVESRMLWERAESTLEAQHLAENLSLAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGSDW*
C688J35102_11917678113300002568SoilMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWEDIEGLERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPCPRDVPAAWYMAEDTSFGSEW*
soilL1_1004206133300003267Sugarcane Root And Bulk SoilMRIVVWGNGIVESRMLWERGESTLEAQHLAETLSMAWEDLEGLERWAVEIECPDPDDVLKLVEETSADDAVLGWSPAPKEIPAAWFMADEQYLPGADW*
Ga0058897_1115866623300004139Forest SoilMRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0066677_1039516023300005171SoilMRIVVWGNGIVESRMLWERGESTLEAHHLAETLSIAWEDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0066680_1004265333300005174SoilMRIVVWGNGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066673_1030245323300005175SoilMRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPTPKEIPAAWFMSDDAYLPGSEW*
Ga0066688_1002454213300005178SoilMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066684_1015983023300005179SoilMRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW*
Ga0066671_1032137713300005184SoilMRIVVWGNGIVESQMLWERGESTLEAQHLAETLSLAWDDLDGLERWALEIECPHPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066675_1080602213300005187SoilMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW*
Ga0070703_1050321023300005406Corn, Switchgrass And Miscanthus RhizosphereSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070714_10095205923300005435Agricultural SoilMRIVVWGNGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLPGSDW*
Ga0070705_10001109953300005440Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKE
Ga0070700_10151613713300005441Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGADW*
Ga0070708_10031906023300005445Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGVGAVESGMLWERAASTEDACLVAETLSLAWDDVEGPERWAVEIECADPDEVLRLVEETSGDDAVLGWSPAPKEIPTSWFMADEAENRW*
Ga0070708_10088238813300005445Corn, Switchgrass And Miscanthus RhizosphereMWGKGTVMRIVVWGSGIVESRMLWERGESTLEAHSVAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPTAWYMSDDASLPGSDW*
Ga0066687_1032475713300005454SoilIVESRMLWQRGEATLEAQSLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070681_1003762843300005458Corn RhizosphereMRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLHGSDW*
Ga0070681_1173708023300005458Corn RhizosphereSGESTLEAQHLAETLSMAWEDIDGLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPATWFMADEPFTPGADW*
Ga0070706_10004500413300005467Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070707_10055487423300005468Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDVEGLDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0070707_10123036323300005468Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGVGAVESGMLWARAEGTDDARQVAETLSLAWDDVEGPERWAVEIECADPDDVLRLVEETSGDDAVLGWSPAPKEIPTSWFMTDEAENLW*
Ga0070707_10193658623300005468Corn, Switchgrass And Miscanthus RhizosphereMWGKGTVMRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPTAWFMSDDASLPGSDW*
Ga0070741_10005253113300005529Surface SoilMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW*
Ga0070741_1001170093300005529Surface SoilMRIVVWGNGIVESRMLWERGESTLEARHLAETLSLAWDDLGGLERWALEVECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDASLPGSDW*
Ga0070741_1006285253300005529Surface SoilMRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLPGSDW*
Ga0070741_1017514733300005529Surface SoilMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSMAWDDIEGIDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGADW*
Ga0070704_10184709913300005549Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGNGIVESRMLWERGECTLEAQHLAESLSMAWEDLEGLERWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0066661_1005825913300005554SoilGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066699_1020589813300005561SoilMRIVVWGSGIVESRMLWERGESTLEAHHLAETLSIAWEDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSD
Ga0070664_10164084213300005564Corn RhizosphereVDKTIRLGSGGVPREKGPAMRIVVWGNGIVESRMLWERAESTLEAQHLAETLSLAWEDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGSDW*
Ga0068856_10150040713300005614Corn RhizosphereMRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW*
Ga0066696_1000849513300006032SoilIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0066660_1102863013300006800SoilMRIVVWGSGIVESRMLWERGESSLEAHHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMGEDTSFGNDW*
Ga0079215_1028399423300006894Agricultural SoilMRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW*
Ga0079216_1044460913300006918Agricultural SoilMRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWEDIEGLDRWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAAHQGNDW*
Ga0079216_1151381213300006918Agricultural SoilMLWERAESSLEAQHLAETLSIAWEDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDASHQGNDW*
Ga0079219_1127057513300006954Agricultural SoilMRIVVWGNGIVESRMLWERGESTLEAHHLAETLSLAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW*
Ga0079218_1004787913300007004Agricultural SoilMRIVVWGSGIVESRMLWERGEATLEAQSLAETLSMAWDDIEGLSRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADESFLPGADW*
Ga0079218_1047901313300007004Agricultural SoilREKGPAMRIVVWGSGIVESRMLWERGEATLEAQNLAETLSMAWDDIEGLNRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW*
Ga0079218_1143003133300007004Agricultural SoilMRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWEDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDA
Ga0066710_10032888923300009012Grasslands SoilMRIVVWGVGAVESGMLWERAAGTDEARLVAETLSLAWEDVEGPERWAVEIECTDSDDVLRLVEETSGDDAVLGWSPAPKEIPTSWFMADEAENLW
Ga0066710_10385593913300009012Grasslands SoilMRIVVWGSGIVESRMLWERAESTLEAHNLAETLSIAWEDLGGVERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLGNDW
Ga0105248_1278888423300009177Switchgrass RhizosphereMRIVVWGQGIVESKMLWERGESTLEAHDLAETLSIAWDDIDGPERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPSAWYMADDAFLQGNDW*
Ga0126323_114019823300010137SoilMRIVVWGSGIVESRMLWQRGEATLEAQSLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0126321_142184023300010145SoilMRIVVWGSGIVESRMLWERGETTLEAQHLAETLSMAWDDIEGLSRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFLPGADW*
Ga0134122_1042209323300010400Terrestrial SoilMRIVVWGSGIVESRMLWQRAEATLEAQTLAETLTMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW*
Ga0150983_1189086723300011120Forest SoilGKGTGMRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0137382_1053917923300012200Vadose Zone SoilMRIVVWGSGIVESRMLWERAESTLEAHNLAETLSIAWEDLGGVERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLGNDW*
Ga0137363_1109371623300012202Vadose Zone SoilMRIVVWGSGIVESRMLWERAESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0150985_10076763723300012212Avena Fatua RhizosphereMRIVVWGSGIVESRMLWERGETTLEAQHLAETLSLAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDASLPGSEW*
Ga0150985_10114460013300012212Avena Fatua RhizosphereMRIVVWGNGIVESRMLWERGESSLEAHHLAETLSMAWDDIDGLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWFMADEPFMPGADW*
Ga0150985_10146540223300012212Avena Fatua RhizosphereSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPATWFMADDASLGNDW*
Ga0150985_10261914413300012212Avena Fatua RhizosphereRKGPAMRIVVWGNGIVESRMLWERGESTLEAQHLAETLSMAWEDIEGLERWAVEIECPDPDDVLRLVEETSADDAVLGWSPAPKEIPAAWFMADEHFLPGADW*
Ga0150985_10586415313300012212Avena Fatua RhizosphereMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSLEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGGEW*
Ga0150985_11397251913300012212Avena Fatua RhizosphereEEPAMRIVVWGSGIVESRMLWERGEATLEAHHLAETLSIAWEDIEGIERWALEIECPEPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW*
Ga0134040_112365313300012389Grasslands SoilPEREEPAMRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0134048_100125113300012400Grasslands SoilMRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGVDW*
Ga0134053_105257923300012406Grasslands SoilMRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSADDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0150984_10332890033300012469Avena Fatua RhizosphereMRIVVWGSGIVESRMLWERGESTLDAHHLAENLSLAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMGEDAYLGNDW*
Ga0150984_11107596413300012469Avena Fatua RhizosphereMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWEDIEGLERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW*
Ga0137416_1121256523300012927Vadose Zone SoilMRIVVWGSGIVESKMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYFPGSDW*
Ga0137416_1149460223300012927Vadose Zone SoilMRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW*
Ga0137404_1005527923300012929Vadose Zone SoilMRIVVWGSGIVESRMLWERAESTLDAHHLAETLSIAWEDIEGLKRWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDSYLPGSDW*
Ga0137404_1075691723300012929Vadose Zone SoilMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSMEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW*
Ga0137410_1089714113300012944Vadose Zone SoilMRIVVWGSGIVESRMLWERGESSLDAHHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW*
Ga0134087_1038303823300012977Grasslands SoilMRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSD
Ga0157372_1187231613300013307Corn RhizosphereMRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLPGSDW*
Ga0134081_1037857213300014150Grasslands SoilMRIVVWGSGIVESRMLWERGESTLDAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGTDW*
Ga0132258_1387966913300015371Arabidopsis RhizosphereMRIVVWGSGIVESRMLWERGVSTLEAEHLAETLSIAWDDIDLFNRWAVEIECPNPDDVLRLVEETSGDDAVLGWSPAPREIPTAWFMADDTFLQGNDW*
Ga0184618_1033259323300018071Groundwater SedimentMRIVVWGNGIVESRMLWERGESTLEATNVAETLSLAWEDIEGLERWALEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAFLPGSDW
Ga0184639_1058310713300018082Groundwater SedimentMRVVVWGTGVMESRMLWEQAQATAEAARLAETLSLAWDDVEGPLRWAVEVECPEPDDVLRLVEETSGDDSVLGWSPAPRDVP
Ga0190265_1056436013300018422SoilMRVVVWGQGVMESRMLWEQAQATEEAARLAETLSLAWDDVDGPLRWAVEVECPEPDDVLRLVEETSGDDAVLGWSPAPRDVPADWFMVDEEEENTSLEW
Ga0190265_1166161613300018422SoilMRIVVWGSGIVESQMLWDRAQSTLEAQHLAESLSLAWEDIEGLDRWAVEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFLSDDAYQGNDW
Ga0190265_1243624313300018422SoilMRVVVWGIGVFESRMLWEDATATAEAAMLAETLSLAWDDIEGPERWAVEVECPESDDVLRLVEETAQDDSVLGWSPAPRTVPADWFMADEDEPVDW
Ga0190265_1319681623300018422SoilWGNGIVESRMLWERGEATLEAQNLAETLSMAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWFMADEPFGADWQ
Ga0190272_1032786013300018429SoilMRIVVWGNGIVESRMLWERAESTLEAQHLAETLSIAWDDIEGLDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWFMADEPFGADW
Ga0190272_1115648013300018429SoilMRVVVWGQGVMESRMLWEQAQATEEAAHLAETLSLAWDDVDGPLRWAVEVECPEPDDVLRLVEETSGDDAVLGWSPAPRDVPADWFLVDEEEENTSLEW
Ga0190272_1130765423300018429SoilMRIVVWGSGIVESRMLWQRAESTLEAHHLAETLSIAWDDIEGLDRWAVEIECPQPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYQGND
Ga0190272_1134588523300018429SoilMRIVVWGNGIVESRMLWERAEATLEAQNLAETLSMAWDDVEGLNRWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0066667_1086582513300018433Grasslands SoilMRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMGEDSSFGNDW
Ga0190269_1015700523300018465SoilMRIVVWGNGIVESRMLWERAESTLEAMHLAENLSMAWEDLEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADESYGADW
Ga0190268_1020075923300018466SoilMRVVVWGIGAFESRMLWEDATATAEAAMLAETLSLAWDDIEGPERWAVEIECPESDDVLRLVEETAQDDSVLGWSPAPRTVPADWFMADEDEPVD
Ga0190268_1033230213300018466SoilPAMRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADEPFLPGADW
Ga0066662_1135806813300018468Grasslands SoilMRIVVWGSGIVESRMLWQRGESTLEAHHLAETLSLAWDDLERLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0190264_1010244123300019377SoilMRVVVWGIGAFESRMLWEDATATAEAAMLAETLSLAWDDIEGPERWAVEIECPESDDVLRLVEETAQDDSVLGWSPAPRTVPADWFMADEDEPVDW
Ga0190264_1038299313300019377SoilMRIVVWGSGIVESRMVWERGEATLEAQSMAETLSMAWDDIEGLDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0190264_1044200113300019377SoilGPAMRIVVWGSGIVESRMLWERAEATLEAQNLAETLSMAWDDIEGLDRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0187892_1055091813300019458Bio-OozeMRVVVWGIGVFESRMLWEEATATAEAALLAETLSLAWDDIEGPQRWAVEIECPDSDDVLRLVEETSADDSVLGWSPAPRSIPADWYMADEETPADW
Ga0206356_1165521713300020070Corn, Switchgrass And Miscanthus RhizosphereWKGPAMRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0206355_142040213300020076Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGNGIVESRMLWERGESTLEAQHMAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0206355_154479413300020076Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMSDDAYLHGSDW
Ga0179594_1043265913300020170Vadose Zone SoilPPIPGTDRREGKGNPMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSMEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW
Ga0196958_1000772133300020181SoilMRIVVWGNGIVESRMLWEWAESTLEAMHLAETLSMAWDDLEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWFMADESYGADW
Ga0196959_1002334823300021184SoilMRIVVWGSGIVESRMVWERGEATLEAQSLAETLSMAWDDIEGLERWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADEHYLPGADW
Ga0196959_1011833123300021184SoilMRIVVWGSGIVESRMLWQRAEATREAQHLAETLSMAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADEPYRPGADW
Ga0196959_1018614823300021184SoilMRIVVWGNGIVESRMLWERAESTLEAMHLAETLSMAWDDLEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWFMADESYGADW
Ga0242648_105998323300022506SoilGTGMRIVVWGSGIVESRMLWERGESTLDAHHLAETLSIAWEDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW
Ga0242660_111218713300022531SoilGKGTGMRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTHFPGSDW
Ga0242660_123455123300022531SoilMRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSDW
Ga0196962_1000510533300024430SoilMRIVVWGNGIVESRMLWERAESTLEAMHLAETLSMAWDDIQGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPYGADW
Ga0196962_1001471033300024430SoilMRIVVWGSGIVESRMLWERAEASLEAQNLAETLSMAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMADEHYLPGADW
Ga0209640_1140886523300025324SoilMRVVVWGVGAVESAMLWERAEATAEASRLAETLSLAWDDIDGPERWAVEVECPEPDDVLRLVEETSGDDSVLGWSPAPREVPAAWYMADDDPLGF
Ga0207653_1037554913300025885Corn, Switchgrass And Miscanthus RhizosphereSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW
Ga0207684_1119500713300025910Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGSGIVESRMLWQRAEATLEAQTLAETLSMAWDDIESIDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFAPGADW
Ga0207646_1129300813300025922Corn, Switchgrass And Miscanthus RhizosphereMRIVVWGVGAVESGMLWARAEGTDDARQVAETLSLAWDDVEGPERWAVEIECADPDDVLRLVEETSGDDAVLGWSPAPKEIPTSWFMTDEAENLW
Ga0207711_1179448713300025941Switchgrass RhizosphereMRIVVWGQGIVESKMLWERGESTLEAHDLAETLSIAWDDIDGPERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPSAWYMADDAFLQGNDW
Ga0207661_1044775723300025944Corn RhizosphereMRIVVWGNGIVESRMLWESGESTLEAQHLAETLSMAWEDIDGLERWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPATWFMADEPFTPGADW
Ga0207667_1081463013300025949Corn RhizosphereMRIVVWGNGIVESRMLWERGESTLEAQNLAETLSLAWDDLEGLERWALEIDCPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWY
Ga0209027_119555523300026300Grasslands SoilMLWERAESTLEAHNLAETLSIAWEDLGGVERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLGNDW
Ga0209239_122628713300026310Grasslands SoilMRIVVWGNGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0209473_127862123300026330SoilMRIVVWGSGIVESRMLWERGESTMEAQHLAETLSIAWEDIEGLERWALEIECPESDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGSEW
Ga0209267_122021823300026331SoilMRIVVWGSGIVESRMLWERGESTLEAQHLAETLSLAWDDLEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWYMSDDAYLPGSDW
Ga0209805_140146523300026542SoilMRIVVWGSGIVESRMLWERGESTLEAHHLAETLSIAWEDIEGLERWALEIECPAPDDVLRLVEETSGDDAVLGWSPAPKE
Ga0256866_101325923300027650SoilMRVVVWGTGVMESRMLWEQARATEEAAHLAETLSMAWDDVQGPLRWAVEVDCPDPDDVLRLVEETSGDESVLGWSPAPRDVPADWFMVDEEEENLPLEW
Ga0209486_1048438623300027886Agricultural SoilMRIVVWGSGIVESRMLWERGEATLEAQSLAETLSMAWDDIEGLSRWAVEVECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADESFLPGADW
Ga0247707_102449623300028003SoilMRIVVWGSGIVESRMLWERAESTLEAQHLAETLSIAWEDIEGLDRWSVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMTDDAYHQGHDW
Ga0247717_102044413300028006SoilMRIVVWGSGIVESRMLWERAESTLDAQHLAETLSIAWDDIEGLDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWFLADDAYHQGNDW
Ga0137415_1034139833300028536Vadose Zone SoilMRIVVWGSGIVESRMLWERAESTLEAHHLAETLSIAWDDIEGLERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW
Ga0307504_1007394023300028792SoilMRIVVWGNGIVESRMLWERGESTLAATNVAETLSLAWDDIEGLERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYLPGSDW
Ga0299907_1009153723300030006SoilMRIVVWGSGIVESRMVWERGEATLEAQNMAETLSMAWDDIEGLDRWAIEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPTAWYMADEPFRLDADW
Ga0299907_1015837123300030006SoilMRIVVWGTGVVESRMLWELAEATEDAVRVAETLSIAWDDVEGPERWAVEVDCPDPDDVLRLVEETSADDSVLGWSPAPREIPAAWFMAD
Ga0299907_1107550913300030006SoilMRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWDDIEGLDRWAVEVECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDAYHQGNDW
Ga0073997_1221839313300030997SoilIVVWGSGIVESRMLWERGESTLEAQHLAETLSIAWDDIEGLERWSMEIECPEPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGSEW
Ga0299913_1006436423300031229SoilMRIVVWGSGIVESRMLWERAEATLEARNLAETLSMAWDDIEGLDRWAIEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADEPFLPGADW
Ga0307408_10047106923300031548RhizosphereMRIVVWGSGIVESRMLWERGEATLEAQNLAETLSMAWDDIEGLDRWAVEIECPDPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWYMADETFRLDADW
Ga0307408_10214148113300031548RhizosphereWGNGIVESRMLWERAESTLEAQHLAENLSLAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGADW
Ga0307469_1096171323300031720Hardwood Forest SoilMRIVVWGSGIVESRMLWERGESTLEAQNLAETLSIAWDDIEGIERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMADEPFLPGADW
Ga0307405_1112123913300031731RhizosphereMRIVVWGSGIVESRMLWERAESSLEAQHLAETLSIAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADDASHQANDW
Ga0307468_10084971813300031740Hardwood Forest SoilGPAMRIVVWGSGIVESRMLWERAESTLEAQNLAETLSMAWDDVEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPREIPAAWYMADEPFLPGADW
Ga0307473_1054811923300031820Hardwood Forest SoilMRIVVWGSGIVESRMLWERGESTLEAQNLAETLSIAWDDIEGIERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEVPAAWFMADDTYLPGSDW
Ga0307411_1132980523300032005RhizosphereMRIVVWGNGIVESRMLWERAESTLEAQHLAENLSLAWDDIEGLDRWAVEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFAPGSDW
Ga0307471_10001472333300032180Hardwood Forest SoilMRIVVWGSGIVESRMLWERGESTLEAQNLAETLSIAWDDIEGIERWALEIECPDPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMADEPFSPGADW
Ga0307471_10014623743300032180Hardwood Forest SoilMRIVVWGSGIVESRMLWERGESTLEAQNLAETLSMAWDDIEGLERWALEIECPEPDDVLQLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYFPGADW
Ga0334913_147435_3_2723300034172Sub-Biocrust SoilMRIVVWGVGAVESNMLWQRAEGTEDARRVAETLSMAWEDVAGPERWAVEIECRDSDDVLRLIEETASDDSVLGWSPAPREIPAAWFLADE
Ga0372943_0036511_2445_26903300034268SoilMRVVVWGSGIVESQMLWERGESTLEAQHLAETLSIAWDDIEGPERWSLEIECPQPDDVLRLVEETSGDDAVLGWSPCPRDVP
Ga0372943_0406326_250_5433300034268SoilMRIVVWGSGIVESNMLWERGESTLEAQHLAETLSIAWDDIEGPERWSLEIECPRPDDVLRLVEETSGDDAVLGWSPCPRDVPTAWYMAEDTSFGADW
Ga0372943_0735822_151_4743300034268SoilMPPEGEEPAMRIVVWGSGIVESRMLWERGEATLEAHHLAETLSIAWEDIEGIERWALEIECPEPDDVLRLVEETSGDDAVLGWSPAPKEIPAAWFMSDDAYLPGNDW
Ga0334931_181916_219_4763300034377Sub-Biocrust SoilMLWERAEGTEDARRVAEALSIAWDDVAGPERWAVEIDCTDPDEVLRLVEETSADDSVLGWSPAPREIPTAWFMADDAENLTAYDW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.