Metagenome / Metatranscriptome Family F053119

Basic Information
Family ID	F053119
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	110 residues
Representative Sequence	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR
Number of Associated Samples	114
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.35 %
% of genes near scaffold ends (potentially truncated)	56.03 %
% of genes from short scaffolds (< 2000 bps)	92.91 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (11.348 % of family members)
Environment Ontology (ENVO)	Unclassified (26.950 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.482 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.20% β-sheet: 0.00% Coil/Unstructured: 41.80%
Feature Viewer

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Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF04392	ABC_sub_bind	3.55
PF02627	CMD	2.84
PF03401	TctC	1.42
PF12536	DUF3734	1.42
PF00313	CSD	0.71
PF05193	Peptidase_M16_C	0.71
PF04226	Transgly_assoc	0.71
PF12071	DUF3551	0.71
PF00890	FAD_binding_2	0.71
PF01471	PG_binding_1	0.71
PF00589	Phage_integrase	0.71
PF00903	Glyoxalase	0.71
PF02518	HATPase_c	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.55
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	2.84
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	2.84
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.42
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.48 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.13 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.13 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.13 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.71 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	5.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.13 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	0.71 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.71 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	4.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.13 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	0.71 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.71 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.71 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111006\|2214746245	Not Available	500	Open in IMG/M
2228664022\|INPgaii200_c0738404	Not Available	607	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102003808	Not Available	651	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1020625	Not Available	1045	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10020080	Not Available	1834	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10021250	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300004463\|Ga0063356_106476474	Not Available	501	Open in IMG/M
3300004479\|Ga0062595_101018133	Not Available	714	Open in IMG/M
3300005163\|Ga0066823_10005115	Not Available	1696	Open in IMG/M
3300005165\|Ga0066869_10005448	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300005277\|Ga0065716_1012745	Not Available	591	Open in IMG/M
3300005289\|Ga0065704_10503300	Not Available	665	Open in IMG/M
3300005332\|Ga0066388_100671971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1647	Open in IMG/M
3300005332\|Ga0066388_100802728	Not Available	1533	Open in IMG/M
3300005332\|Ga0066388_103500999	Not Available	801	Open in IMG/M
3300005332\|Ga0066388_105294263	Not Available	654	Open in IMG/M
3300005332\|Ga0066388_108399590	Not Available	515	Open in IMG/M
3300005334\|Ga0068869_100270365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1363	Open in IMG/M
3300005334\|Ga0068869_101001128	Not Available	728	Open in IMG/M
3300005335\|Ga0070666_10974233	Not Available	629	Open in IMG/M
3300005337\|Ga0070682_100475408	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300005337\|Ga0070682_100865868	Not Available	740	Open in IMG/M
3300005339\|Ga0070660_100439967	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300005340\|Ga0070689_100110716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2183	Open in IMG/M
3300005340\|Ga0070689_101977167	Not Available	533	Open in IMG/M
3300005345\|Ga0070692_10870661	Not Available	620	Open in IMG/M
3300005365\|Ga0070688_100469923	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300005367\|Ga0070667_101333336	Not Available	672	Open in IMG/M
3300005436\|Ga0070713_100010557	All Organisms → cellular organisms → Bacteria → Proteobacteria	6677	Open in IMG/M
3300005439\|Ga0070711_100369780	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005439\|Ga0070711_101759145	Not Available	544	Open in IMG/M
3300005440\|Ga0070705_100161318	Not Available	1499	Open in IMG/M
3300005546\|Ga0070696_100529287	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300005713\|Ga0066905_100369044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300005764\|Ga0066903_102112136	Not Available	1084	Open in IMG/M
3300005764\|Ga0066903_102890383	Not Available	931	Open in IMG/M
3300005764\|Ga0066903_105051664	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300005764\|Ga0066903_109092753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	502	Open in IMG/M
3300005843\|Ga0068860_100087969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2957	Open in IMG/M
3300006844\|Ga0075428_102701768	Not Available	506	Open in IMG/M
3300006854\|Ga0075425_100747072	Not Available	1122	Open in IMG/M
3300006854\|Ga0075425_101412017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	787	Open in IMG/M
3300006854\|Ga0075425_101655243	Not Available	721	Open in IMG/M
3300006871\|Ga0075434_100788430	Not Available	967	Open in IMG/M
3300006904\|Ga0075424_101117851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	839	Open in IMG/M
3300009036\|Ga0105244_10196919	Not Available	951	Open in IMG/M
3300009092\|Ga0105250_10206646	Not Available	829	Open in IMG/M
3300009094\|Ga0111539_11786014	Not Available	713	Open in IMG/M
3300009098\|Ga0105245_10367148	Not Available	1430	Open in IMG/M
3300009098\|Ga0105245_12572603	Not Available	562	Open in IMG/M
3300009147\|Ga0114129_11038593	Not Available	1030	Open in IMG/M
3300009148\|Ga0105243_10159242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1945	Open in IMG/M
3300009156\|Ga0111538_10685972	Not Available	1298	Open in IMG/M
3300009174\|Ga0105241_10670992	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009176\|Ga0105242_12127671	Not Available	605	Open in IMG/M
3300009553\|Ga0105249_10794991	Not Available	1010	Open in IMG/M
3300009792\|Ga0126374_11856925	Not Available	505	Open in IMG/M
3300010043\|Ga0126380_10530496	Not Available	911	Open in IMG/M
3300010043\|Ga0126380_10715070	Not Available	807	Open in IMG/M
3300010046\|Ga0126384_10852991	Not Available	819	Open in IMG/M
3300010047\|Ga0126382_11118545	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010358\|Ga0126370_11043958	Not Available	749	Open in IMG/M
3300010358\|Ga0126370_11920715	Not Available	576	Open in IMG/M
3300010359\|Ga0126376_10464700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300010359\|Ga0126376_11246694	Not Available	761	Open in IMG/M
3300010361\|Ga0126378_13246828	Not Available	517	Open in IMG/M
3300010362\|Ga0126377_10193951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1941	Open in IMG/M
3300010362\|Ga0126377_11675365	Not Available	711	Open in IMG/M
3300010366\|Ga0126379_10207674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1890	Open in IMG/M
3300010366\|Ga0126379_11042036	Not Available	923	Open in IMG/M
3300010371\|Ga0134125_10918721	Not Available	961	Open in IMG/M
3300010375\|Ga0105239_11265849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	851	Open in IMG/M
3300010375\|Ga0105239_11611090	Not Available	751	Open in IMG/M
3300010401\|Ga0134121_12650647	Not Available	545	Open in IMG/M
3300010403\|Ga0134123_10313105	Not Available	1398	Open in IMG/M
3300010863\|Ga0124850_1038760	Not Available	1518	Open in IMG/M
3300011119\|Ga0105246_10368964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	1182	Open in IMG/M
3300012285\|Ga0137370_10764962	Not Available	599	Open in IMG/M
3300012489\|Ga0157349_1008623	Not Available	782	Open in IMG/M
3300012498\|Ga0157345_1035056	Not Available	580	Open in IMG/M
3300012503\|Ga0157313_1007044	Not Available	864	Open in IMG/M
3300012508\|Ga0157315_1024170	Not Available	666	Open in IMG/M
3300012510\|Ga0157316_1001915	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300012514\|Ga0157330_1005924	Not Available	1056	Open in IMG/M
3300012948\|Ga0126375_10407372	Not Available	985	Open in IMG/M
3300012948\|Ga0126375_11333299	Not Available	605	Open in IMG/M
3300012955\|Ga0164298_11141608	Not Available	586	Open in IMG/M
3300012957\|Ga0164303_10037624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2048	Open in IMG/M
3300012957\|Ga0164303_10674079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	693	Open in IMG/M
3300012958\|Ga0164299_11554173	Not Available	519	Open in IMG/M
3300012960\|Ga0164301_10577423	Not Available	826	Open in IMG/M
3300012961\|Ga0164302_10214918	Not Available	1194	Open in IMG/M
3300012986\|Ga0164304_11697733	Not Available	528	Open in IMG/M
3300012987\|Ga0164307_10001490	All Organisms → cellular organisms → Bacteria → Proteobacteria	10633	Open in IMG/M
3300012988\|Ga0164306_11746006	Not Available	540	Open in IMG/M
3300013102\|Ga0157371_10780997	Not Available	719	Open in IMG/M
3300013105\|Ga0157369_10697989	Not Available	1045	Open in IMG/M
3300013296\|Ga0157374_11642477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	667	Open in IMG/M
3300013308\|Ga0157375_11242833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	874	Open in IMG/M
3300014969\|Ga0157376_12835957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	524	Open in IMG/M
3300015372\|Ga0132256_100144539	Not Available	2378	Open in IMG/M
3300015372\|Ga0132256_100254167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1828	Open in IMG/M
3300015373\|Ga0132257_100369742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1737	Open in IMG/M
3300015373\|Ga0132257_100413015	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300015373\|Ga0132257_102195559	Not Available	714	Open in IMG/M
3300015374\|Ga0132255_100433758	Not Available	1920	Open in IMG/M
3300015374\|Ga0132255_101536391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1008	Open in IMG/M
3300016371\|Ga0182034_11783939	Not Available	542	Open in IMG/M
3300017792\|Ga0163161_11355401	Not Available	620	Open in IMG/M
3300017947\|Ga0187785_10225281	Not Available	828	Open in IMG/M
3300025899\|Ga0207642_10070905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1658	Open in IMG/M
3300025904\|Ga0207647_10636571	Not Available	586	Open in IMG/M
3300025906\|Ga0207699_10367387	Not Available	1019	Open in IMG/M
3300025911\|Ga0207654_10991434	Not Available	611	Open in IMG/M
3300025916\|Ga0207663_10303088	Not Available	1194	Open in IMG/M
3300025916\|Ga0207663_11689644	Not Available	509	Open in IMG/M
3300025919\|Ga0207657_10366402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300025934\|Ga0207686_11242033	Not Available	611	Open in IMG/M
3300025936\|Ga0207670_11504037	Not Available	572	Open in IMG/M
3300025940\|Ga0207691_10896707	Not Available	742	Open in IMG/M
3300025972\|Ga0207668_11559696	Not Available	596	Open in IMG/M
3300026118\|Ga0207675_100985723	Not Available	861	Open in IMG/M
3300026802\|Ga0207511_104463	Not Available	659	Open in IMG/M
3300027907\|Ga0207428_11212605	Not Available	525	Open in IMG/M
3300028819\|Ga0307296_10634863	Not Available	584	Open in IMG/M
3300030916\|Ga0075386_12066843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1024	Open in IMG/M
3300031170\|Ga0307498_10183004	Not Available	719	Open in IMG/M
3300031573\|Ga0310915_10000301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23508	Open in IMG/M
3300031744\|Ga0306918_10013978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4659	Open in IMG/M
3300031770\|Ga0318521_10261588	Not Available	1012	Open in IMG/M
3300031892\|Ga0310893_10048921	Not Available	1395	Open in IMG/M
3300031908\|Ga0310900_11769253	Not Available	525	Open in IMG/M
3300031913\|Ga0310891_10034189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	1353	Open in IMG/M
3300031940\|Ga0310901_10040845	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300031943\|Ga0310885_10336218	Not Available	789	Open in IMG/M
3300031944\|Ga0310884_10020613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2651	Open in IMG/M
3300032003\|Ga0310897_10196697	Not Available	876	Open in IMG/M
3300032012\|Ga0310902_10430540	Not Available	846	Open in IMG/M
3300032013\|Ga0310906_10017247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2980	Open in IMG/M
3300032075\|Ga0310890_10902608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	705	Open in IMG/M
3300032211\|Ga0310896_10373257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	756	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.28%
Host-Associated	Host-Associated	39.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.28%
Plants	Host-Associated → Plants	39.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.86%
Loam	Environmental → Terrestrial → Soil → Loam	18.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.51%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2213756417	2209111006	Arabidopsis Rhizosphere	MSEVLGAFMKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMSGVPIDVQKKFVLNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR
INPgaii200_07384042	2228664022	Soil	LMKSICGIAFVLGLLSQTTNSIADPALMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNIMETTGTYRDMAAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHYKLPLKKTAPASSR
INPhiseqgaiiFebDRAFT_1020038082	3300000364	Soil	MKSICGIAFVLGLLSQTTNSIADPALMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNIMETTGTYRDMAAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHYKLPLKKTAPASSR*
AF_2010_repII_A01DRAFT_10206252	3300000580	Forest Soil	MKSICGIASVLGLLSQTTNSVADPAIMGPGSVTCGKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQHPSLEXAKAVMELYHYKLPLKKTEHQ*
AF_2010_repII_A1DRAFT_100200802	3300000597	Forest Soil	MGPGSVTCGKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQHPSLEXAKAVMELYHYKLPLKKAAPASSR*
AF_2010_repII_A001DRAFT_100212503	3300000793	Forest Soil	MKSICGIASVLGLLSQTTNSVADPAIMGPGSVTCGKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKAAPASSR*
Ga0063356_1064764741	3300004463	Arabidopsis Thaliana Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0062595_1010181332	3300004479	Soil	LLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0066823_100051153	3300005163	Soil	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0066869_100054481	3300005165	Soil	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0065716_10127451	3300005277	Arabidopsis Rhizosphere	MKSICGIAVLLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMSGVPIDVQKKFVLNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR
Ga0065704_105033001	3300005289	Switchgrass Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0066388_1006719713	3300005332	Tropical Forest Soil	MKSICGITFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQIDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKQFILNYCNRNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0066388_1008027283	3300005332	Tropical Forest Soil	MKSISGIALVLGLLSQTTNSMADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDTQKKFILDYCNKNPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0066388_1035009991	3300005332	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0066388_1052942632	3300005332	Tropical Forest Soil	PGSVTCAKFAADYRQNPDQIDNLFFTWAQGFMSGFNITEISGTYRDMAAVPIDTQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0066388_1083995901	3300005332	Tropical Forest Soil	ADYRQNPDQVDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0068869_1002703651	3300005334	Miscanthus Rhizosphere	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYK
Ga0068869_1010011282	3300005334	Miscanthus Rhizosphere	SVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070666_109742331	3300005335	Switchgrass Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070682_1004754082	3300005337	Corn Rhizosphere	AIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070682_1008658681	3300005337	Corn Rhizosphere	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0070660_1004399672	3300005339	Corn Rhizosphere	VTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070689_1001107163	3300005340	Switchgrass Rhizosphere	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0070689_1019771671	3300005340	Switchgrass Rhizosphere	DYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070692_108706611	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070688_1004699232	3300005365	Switchgrass Rhizosphere	GPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070667_1013333361	3300005367	Switchgrass Rhizosphere	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKA
Ga0070713_10001055710	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070711_1003697802	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0070711_1017591451	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0070705_1001613182	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVME
Ga0070696_1005292873	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	CGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0066905_1003690442	3300005713	Tropical Forest Soil	MGPGSVTCGKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDTQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0066903_1021121361	3300005764	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDSLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0066903_1028903832	3300005764	Tropical Forest Soil	ICWIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0066903_1050516641	3300005764	Tropical Forest Soil	KFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDTQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0066903_1090927531	3300005764	Tropical Forest Soil	FTLLFAKELDCQKRWERFMKSISGIALVLGLLSQTTNSMADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDTQKKFILDYCNKNPSLEYAKAVMELYHYKLPLKKTPPASPR*
Ga0068860_1000879691	3300005843	Switchgrass Rhizosphere	LLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0075428_1027017682	3300006844	Populus Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMTAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHHKLPLKKTPPASSR*
Ga0075425_1007470721	3300006854	Populus Rhizosphere	MKSICGIALVLGLLSQTTNSMADYAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGLMSGFNITETTGTYRDMTAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHHKLPLKKTPPASSR*
Ga0075425_1014120172	3300006854	Populus Rhizosphere	MKSICGIAFVLGLLSETTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0075425_1016552432	3300006854	Populus Rhizosphere	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0075434_1007884302	3300006871	Populus Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYH
Ga0075424_1011178512	3300006904	Populus Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0105244_101969191	3300009036	Miscanthus Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVM
Ga0105250_102066462	3300009092	Switchgrass Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0111539_117860141	3300009094	Populus Rhizosphere	IADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0105245_103671483	3300009098	Miscanthus Rhizosphere	ERFMKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0105245_125726031	3300009098	Miscanthus Rhizosphere	IMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0114129_110385932	3300009147	Populus Rhizosphere	MADYAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGLMSGFNITETTGTYRDMTAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHHKLPLKKTPPASSR*
Ga0105243_101592422	3300009148	Miscanthus Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0111538_106859722	3300009156	Populus Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0105241_106709922	3300009174	Corn Rhizosphere	GLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0105242_121276711	3300009176	Miscanthus Rhizosphere	FVLGLLSQTTNSIADPAIMGPGSVTCGKFAAEYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0105249_107949912	3300009553	Switchgrass Rhizosphere	AFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0126374_118569251	3300009792	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0126380_105304961	3300010043	Tropical Forest Soil	MGPGSVTCGKFAADYRQNPDQIDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKQFILNYCNRNPSLEYAKAVMELY
Ga0126380_107150702	3300010043	Tropical Forest Soil	MGPGSVTCGKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0126384_108529912	3300010046	Tropical Forest Soil	MKSIYGIAFVLGLLSQTTNSVADPAIMGPGSVTCAKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKAPPASSR*
Ga0126382_111185452	3300010047	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQLDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0126370_110439581	3300010358	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFIWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYA
Ga0126370_119207151	3300010358	Tropical Forest Soil	SICGIAFVLGLLSQTTNSIADPVIMGPGSVTCSKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDTQKKFILDYCNKNPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0126376_104647003	3300010359	Tropical Forest Soil	PGSVTCGKFAADYRQNPDQIDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKQFILNYCNRNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0126376_112466941	3300010359	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSMADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCDQHPSLEYAKAVME
Ga0126378_132468281	3300010361	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0126377_101939513	3300010362	Tropical Forest Soil	MGPGSVTCGKFAADYRQNPDQIDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKQFILNYCNRNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0126377_116753651	3300010362	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPALMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0126379_102076742	3300010366	Tropical Forest Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0126379_110420361	3300010366	Tropical Forest Soil	MKSISGIALVLGLLSQTTNSMADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0134125_109187212	3300010371	Terrestrial Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTPPASSR*
Ga0105239_112658491	3300010375	Corn Rhizosphere	IADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0105239_116110901	3300010375	Corn Rhizosphere	TCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0134121_126506471	3300010401	Terrestrial Soil	NPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0134123_103131051	3300010403	Terrestrial Soil	MKSICGIAFVLGLLIRTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0124850_10387601	3300010863	Tropical Forest Soil	MSEVLGGFMKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDSLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0105246_103689642	3300011119	Miscanthus Rhizosphere	GKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0137370_107649621	3300012285	Vadose Zone Soil	MKSICGIALVLGLLSQTTNSMADYAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSVFNITETTGTYRDITAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHYKLPLKKTPPGSSR*
Ga0157349_10086231	3300012489	Unplanted Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTETYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0157345_10350561	3300012498	Arabidopsis Rhizosphere	MKSICGIAFVLGLLSETTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0157313_10070442	3300012503	Arabidopsis Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKSAPASSR*
Ga0157315_10241702	3300012508	Arabidopsis Rhizosphere	MKSICGLAFILGLLSQTINSIADPAIIGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPVSSR*
Ga0157316_10019152	3300012510	Arabidopsis Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0157330_10059242	3300012514	Soil	MKSICGIAVLLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFVLNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0126375_104073721	3300012948	Tropical Forest Soil	MKSIYGIAFVLGLLSQTTNSVADPAIMGPGSVTCGKFAADYRQNPDQIDNLFFTWAQGFMSGFNITETSGTYRDMAAVPIDAQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0126375_113332991	3300012948	Tropical Forest Soil	MKSICGIAFVLGFLSQPTNSIADPALMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYK
Ga0164298_111416081	3300012955	Soil	GLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNTTETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0164303_100376241	3300012957	Soil	MKAICGIALVLGLLSQTTNSRADYAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0164303_106740791	3300012957	Soil	ADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0164299_115541731	3300012958	Soil	GLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0164301_105774231	3300012960	Soil	KFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0164302_102149182	3300012961	Soil	MKSICGIALVLGLLSQTTYSMADAVIMGPGSVPCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0164304_116977331	3300012986	Soil	MKSICGIAFVLGLLGQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPL
Ga0164307_100014901	3300012987	Soil	LGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR*
Ga0164306_117460061	3300012988	Soil	QTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVAIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0157371_107809971	3300013102	Corn Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKDIMELYHYKLPLKKTAPASSR*
Ga0157369_106979892	3300013105	Corn Rhizosphere	MGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0157374_116424772	3300013296	Miscanthus Rhizosphere	ADPAIMGPGSVTCGKFAADYRQNPDQVYNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR*
Ga0157375_112428331	3300013308	Miscanthus Rhizosphere	MKLICGIAFVLGLLSQTTIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0157376_128359571	3300014969	Miscanthus Rhizosphere	GIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKSAPASSR*
Ga0132256_1001445396	3300015372	Arabidopsis Rhizosphere	TCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMSGVPIDVQKKFVLNYCNQNPSLEYAKAVMELYHYKLLES*
Ga0132256_1002541673	3300015372	Arabidopsis Rhizosphere	GSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0132257_1003697422	3300015373	Arabidopsis Rhizosphere	GPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR*
Ga0132257_1004130154	3300015373	Arabidopsis Rhizosphere	GPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMSGVPIDVQKKFVLNYCNQNPSLEYAKAVMELYHYKLLES*
Ga0132257_1021955591	3300015373	Arabidopsis Rhizosphere	MKSICGIAFTLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIM
Ga0132255_1004337581	3300015374	Arabidopsis Rhizosphere	MKLICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQYPSLEYAKAVMELYHYKLPLKKTPPASSR*
Ga0132255_1015363911	3300015374	Arabidopsis Rhizosphere	GPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMSGVPIDVQKKFVLNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR*
Ga0182034_117839391	3300016371	Soil	GSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTAPASSR
Ga0163161_113554012	3300017792	Switchgrass Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0187785_102252812	3300017947	Tropical Peatland	MGPGSVTCGKFAADYRQNPDQVDNLFFIWAQGFMSGFNITETTGTYRDMAAVPVDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0207642_100709051	3300025899	Miscanthus Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR
Ga0207647_106365712	3300025904	Corn Rhizosphere	MKSICGLTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0207699_103673871	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0207654_109914341	3300025911	Corn Rhizosphere	LLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0207663_103030882	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FMKSICGIAVVLVLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0207663_116896441	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	IMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR
Ga0207657_103664022	3300025919	Corn Rhizosphere	VTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR
Ga0207686_112420331	3300025934	Miscanthus Rhizosphere	LTFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0207670_115040371	3300025936	Switchgrass Rhizosphere	GPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR
Ga0207691_108967072	3300025940	Miscanthus Rhizosphere	TFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAPASSR
Ga0207668_115596962	3300025972	Switchgrass Rhizosphere	AFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNVTETTGTYRDMTAVPIDVQKKFILNYCNQHPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0207675_1009857231	3300026118	Switchgrass Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCSQNPALEYAKAVMELYHYKLPLKKTAP
Ga0207511_1044632	3300026802	Soil	LVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0207428_112126051	3300027907	Populus Rhizosphere	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKSAPASSR
Ga0307296_106348631	3300028819	Soil	CGIALVLGLLGQTTNSMADYAIMGPSSVTCGKFAADYRQNPDQVNNLFFTWAQGFMSGFNITETTGSYRDMTAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0075386_120668432	3300030916	Soil	MKSICGIAFVLGLLSQTTNSMADYAIMGPGSVTCGKFTADYRQNPDQVDDLFFTWAQGFMSGFNITEATGTYRDMTAVPIDAQKKFILNYCDQHPSLEYAKAVMELYHYKLPLKKTPPASSR
Ga0307498_101830042	3300031170	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAIMGLYHYKLPLKKTAPA
Ga0310915_100003011	3300031573	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR
Ga0306918_100139785	3300031744	Soil	MSEVLGGVMKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR
Ga0318521_102615882	3300031770	Soil	MCVEARSHLGACVREQSTIYGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDSLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR
Ga0310893_100489211	3300031892	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELY
Ga0310900_117692532	3300031908	Soil	RQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKSAPASSR
Ga0310891_100341892	3300031913	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTALASSR
Ga0310901_100408453	3300031940	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMEL
Ga0310885_103362182	3300031943	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKSAPASSR
Ga0310884_100206134	3300031944	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0310897_101966971	3300032003	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDAQKKFILNYCNQNPSLEYAKAVMELYH
Ga0310902_104305402	3300032012	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYH
Ga0310906_100172474	3300032013	Soil	MKSICGIAFVLGLLSQTTNSIADPAIMGPGSVTCGKFAADYRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLH
Ga0310890_109026082	3300032075	Soil	QNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAIMELYHYKLPLKKTAPASSR
Ga0310896_103732571	3300032211	Soil	YRQNPDQVDNLFFTWAQGFMSGFNITETTGTYRDMAAVPIDVQKKFILNYCNQNPSLEYAKAVMELYHYKLPLKKTAPASSR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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