Metagenome / Metatranscriptome Family F053115

Overview

Basic Information

• Family ID: F053115
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 141
• Average Sequence Length: 47 residues
• Representative Sequence: MRIFVRGHSLGIPARLTMLALVTALPLVAVGSFAILRTVDDQRAQIQ
• Number of Associated Samples: 113
• Number of Associated Scaffolds: 141

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 96.45 %
• % of genes near scaffold ends (potentially truncated): 97.87 %
• % of genes from short scaffolds (< 2000 bps): 90.07 %
• Associated GOLD sequencing projects: 112
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (63.830 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.808 % of family members)
• Environment Ontology (ENVO): Unclassified (37.589 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (46.099 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 48.00%
  β-sheet: 0.00%
  Coil/Unstructured: 52.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01738	DLH	33.33
PF00296	Bac_luciferase	6.38
PF00135	COesterase	4.96
PF07690	MFS_1	2.13
PF05199	GMC_oxred_C	2.13
PF07452	CHRD	1.42
PF13701	DDE_Tnp_1_4	1.42
PF01425	Amidase	0.71
PF13193	AMP-binding_C	0.71
PF05992	SbmA_BacA	0.71
PF06627	DUF1153	0.71
PF06833	MdcE	0.71
PF00496	SBP_bac_5	0.71
PF00486	Trans_reg_C	0.71
PF00672	HAMP	0.71
PF02843	GARS_C	0.71
PF01575	MaoC_dehydratas	0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	6.38
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	4.96
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	2.13
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.71
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.71

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.83 %
Unclassified	root	N/A	36.17 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.83 %
Unclassified	root	N/A	36.17 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.83 %
Unclassified	root	N/A	36.17 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.74 %
Unclassified	root	N/A	36.17 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.23 %
Unclassified	root	N/A	36.17 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.38 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.93 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	9.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.38 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2.13 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.71 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.93 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	9.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.38 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.13 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.71 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.93 %
unclassified Reyranella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella	9.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.38 %
Mesorhizobium prunaredense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	2.13 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.71 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.93 %
Reyranella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	9.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.38 %
Mesorhizobium prunaredense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	2.13 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.71 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459005|F1BAP7Q02JQ9D2	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521
3300005166|Ga0066674_10381763	Not Available	657
3300005167|Ga0066672_10386354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916
3300005332|Ga0066388_107145548	Not Available	561
3300005434|Ga0070709_11242479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	600
3300005518|Ga0070699_101038795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751
3300005554|Ga0066661_10538971	Not Available	700
3300005554|Ga0066661_10867666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	528
3300005560|Ga0066670_10950158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	524
3300005576|Ga0066708_10757483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611
3300005764|Ga0066903_100385589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2294
3300005764|Ga0066903_100729548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1754
3300006032|Ga0066696_10546169	Not Available	757
3300006847|Ga0075431_101243202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707
3300006871|Ga0075434_102455284	Not Available	523
3300006893|Ga0073928_10163906	All Organisms → cellular organisms → Bacteria → Proteobacteria	1779
3300009143|Ga0099792_10385963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	854
3300009792|Ga0126374_11801232	Not Available	512
3300010048|Ga0126373_10707984	Not Available	1065
3300010048|Ga0126373_12095802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	627
3300010358|Ga0126370_10304333	Not Available	1266
3300010361|Ga0126378_10794611	Not Available	1056
3300010361|Ga0126378_10917665	Not Available	982
3300010376|Ga0126381_100107741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3574
3300010376|Ga0126381_101036663	Not Available	1184
3300010376|Ga0126381_101900564	Not Available	859
3300010376|Ga0126381_104235816	Not Available	556
3300010398|Ga0126383_12486370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	602
3300011269|Ga0137392_10320152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	1283
3300011270|Ga0137391_10392313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	1187
3300011270|Ga0137391_10901483	Not Available	724
3300011270|Ga0137391_10963399	All Organisms → cellular organisms → Bacteria → Proteobacteria	696
3300011270|Ga0137391_11308198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	572
3300011271|Ga0137393_10413158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1156
3300011271|Ga0137393_10544011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	996
3300012202|Ga0137363_11088113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679
3300012202|Ga0137363_11735077	Not Available	517
3300012210|Ga0137378_11628314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	554
3300012363|Ga0137390_10699223	All Organisms → cellular organisms → Bacteria	976
3300012363|Ga0137390_10972165	Not Available	802
3300012469|Ga0150984_116196399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600
3300012918|Ga0137396_10862149	Not Available	665
3300012922|Ga0137394_11588196	Not Available	511
3300012923|Ga0137359_10979195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726
3300012927|Ga0137416_11972219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	535
3300012971|Ga0126369_10047416	All Organisms → cellular organisms → Bacteria → Proteobacteria	3651
3300012971|Ga0126369_10333877	Not Available	1531
3300012971|Ga0126369_11906154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683
3300016319|Ga0182033_10041089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3053
3300016319|Ga0182033_10834145	All Organisms → cellular organisms → Bacteria	814
3300016404|Ga0182037_10875749	All Organisms → cellular organisms → Bacteria	778
3300016445|Ga0182038_10614756	Not Available	939
3300018482|Ga0066669_11516596	All Organisms → cellular organisms → Bacteria	609
3300020580|Ga0210403_11394202	All Organisms → cellular organisms → Bacteria → Proteobacteria	531
3300020583|Ga0210401_10685427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	885
3300021170|Ga0210400_11611238	All Organisms → cellular organisms → Bacteria	512
3300021178|Ga0210408_10134510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1954
3300021180|Ga0210396_10602109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	955
3300021362|Ga0213882_10395168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	584
3300021406|Ga0210386_11479880	All Organisms → cellular organisms → Bacteria → Proteobacteria	567
3300021432|Ga0210384_10568854	Not Available	1019
3300021432|Ga0210384_10611456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979
3300021432|Ga0210384_10658501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	938
3300021432|Ga0210384_11008945	Not Available	734
3300021474|Ga0210390_10202231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1680
3300021478|Ga0210402_10957965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	783
3300021479|Ga0210410_10538375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1041
3300021559|Ga0210409_10893116	All Organisms → cellular organisms → Bacteria → Proteobacteria	762
3300021560|Ga0126371_10122080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2631
3300022508|Ga0222728_1013661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1095
3300022529|Ga0242668_1089350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	610
3300022532|Ga0242655_10189546	All Organisms → cellular organisms → Bacteria → Proteobacteria	624
3300022708|Ga0242670_1023126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	757
3300022712|Ga0242653_1011334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1116
3300022722|Ga0242657_1144400	Not Available	622
3300022726|Ga0242654_10006443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2358
3300025915|Ga0207693_10063182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2901
3300025928|Ga0207700_10285709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1420
3300026489|Ga0257160_1004574	Not Available	1705
3300026508|Ga0257161_1029890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067
3300026538|Ga0209056_10431885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	774
3300026557|Ga0179587_10512806	Not Available	787
3300027502|Ga0209622_1056816	Not Available	711
3300027680|Ga0207826_1123889	Not Available	708
3300029636|Ga0222749_10823943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	507
3300031231|Ga0170824_102778857	Not Available	809
3300031231|Ga0170824_107011505	Not Available	517
3300031231|Ga0170824_108344736	Not Available	519
3300031546|Ga0318538_10730957	Not Available	537
3300031572|Ga0318515_10569057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	603
3300031573|Ga0310915_10323259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	1092
3300031679|Ga0318561_10412378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	742
3300031680|Ga0318574_10010725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4156
3300031713|Ga0318496_10389005	Not Available	771
3300031715|Ga0307476_10677665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764
3300031719|Ga0306917_11346977	All Organisms → cellular organisms → Bacteria → Proteobacteria	551
3300031724|Ga0318500_10422722	All Organisms → cellular organisms → Bacteria → Proteobacteria	664
3300031747|Ga0318502_10059381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2034
3300031751|Ga0318494_10912086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	515
3300031754|Ga0307475_10842419	Not Available	726
3300031763|Ga0318537_10281544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	616
3300031765|Ga0318554_10011174	All Organisms → cellular organisms → Bacteria → Proteobacteria	4483
3300031793|Ga0318548_10081554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1530
3300031797|Ga0318550_10168777	All Organisms → cellular organisms → Bacteria	1055
3300031797|Ga0318550_10386498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium prunaredense	678
3300031798|Ga0318523_10495569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	604
3300031805|Ga0318497_10425618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743
3300031819|Ga0318568_10453969	Not Available	799
3300031845|Ga0318511_10020921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2393
3300031845|Ga0318511_10426766	Not Available	609
3300031846|Ga0318512_10476859	Not Available	631
3300031846|Ga0318512_10702816	Not Available	518
3300031879|Ga0306919_10882094	All Organisms → cellular organisms → Bacteria	686
3300031880|Ga0318544_10188388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	795
3300031880|Ga0318544_10432906	Not Available	512
3300031890|Ga0306925_10140005	All Organisms → cellular organisms → Bacteria	2601
3300031896|Ga0318551_10939658	Not Available	505
3300031897|Ga0318520_10891620	Not Available	560
3300031910|Ga0306923_10359180	All Organisms → cellular organisms → Bacteria	1661
3300031912|Ga0306921_11456401	All Organisms → cellular organisms → Bacteria	750
3300031941|Ga0310912_11140743	All Organisms → cellular organisms → Bacteria → Proteobacteria	595
3300031942|Ga0310916_10695487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860
3300031946|Ga0310910_11156483	Not Available	601
3300031947|Ga0310909_10053871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3101
3300031959|Ga0318530_10344718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	617
3300031981|Ga0318531_10423715	Not Available	602
3300031981|Ga0318531_10555594	Not Available	520
3300032043|Ga0318556_10146708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1216
3300032052|Ga0318506_10400605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	609
3300032054|Ga0318570_10294320	Not Available	738
3300032055|Ga0318575_10029409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2391
3300032059|Ga0318533_10554913	Not Available	842
3300032060|Ga0318505_10498246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	575
3300032063|Ga0318504_10448961	Not Available	616
3300032065|Ga0318513_10452474	All Organisms → cellular organisms → Bacteria → Proteobacteria	628
3300032076|Ga0306924_10557486	Not Available	1300
3300032180|Ga0307471_101203604	Not Available	922
3300032180|Ga0307471_102283240	Not Available	682
3300032261|Ga0306920_101008164	Not Available	1212
3300033289|Ga0310914_10308055	Not Available	1429
3300033289|Ga0310914_10414643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp.	1219

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.87%
Host-Associated	Host-Associated	2.13%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.16%
Plants	Host-Associated → Plants	2.13%
Aquatic	Environmental → Aquatic	0.71%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.13%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.71%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.07%
Loam	Environmental → Terrestrial → Soil → Loam	6.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.42%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.42%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.71%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07019170	2170459005	Grass Soil	MRLFVRGRSLGIQARLTVLALATALPLVALVGFAILRMV
Ga0066674_103817631	3300005166	Soil	MKRFLRRHSLGIPARLTMLAVVTALPLVAVGSFAILRTVDDQRA
Ga0066672_103863542	3300005167	Soil	MRLFVRRRSFGIQARLTMLAVATALPLVALASFAILRTVDDQRTQIQQ
Ga0066388_1071455482	3300005332	Tropical Forest Soil	MKILLRRHSLGIPARLTLLALVTALPLVAVGSFAILRTVDDQRAQIQ
Ga0070709_112424792	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFVRRRSFGVQARLTMLAVVTALPLVALASWAILRMVDDQRTQIQ
Ga0070699_1010387952	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFVRGRSLGIQARLTVLAVATALPLVALASFAILRMVDDQRTQIKQDVEHRVE
Ga0066661_105389711	3300005554	Soil	MKRFLRRHSLGIPARLTMLAVVTALPLVAVGSFAILR
Ga0066661_108676661	3300005554	Soil	MRLFVRGRSLGIQARLTVLAVATALPLVVLAGFAILRMVDDQRTQIKQDVERQVEN
Ga0066670_109501581	3300005560	Soil	MGLFVRCRTFGIQARLMMLVVVTGLPLVALASLAILRMVEDQRAQ
Ga0066708_107574832	3300005576	Soil	MRLFVRRRSFGIQARLTMLAVATALPLVALASFATLRMVDDQRLQIQQDVQQKVEDL
Ga0066903_1003855895	3300005764	Tropical Forest Soil	MQKLLRRHSLGIQARLTLMALVTALPLVAVASFAILRTVDDERAQIQ
Ga0066903_1007295482	3300005764	Tropical Forest Soil	MKILLRGHSLGIPARLTLLALVTALPLVAVGSFAILRTVDDQRAQIQGSQANGREFPG*
Ga0066696_105461691	3300006032	Soil	MKILLRGHSLGIPARLTMLALVTALPLVAGGSFAILRSVD
Ga0075431_1012432022	3300006847	Populus Rhizosphere	MRLFVRRRSLGIQARLTMLAAATALPLLALVGFSILRMVDDQRTQIKQ
Ga0075434_1024552841	3300006871	Populus Rhizosphere	MKRFLGRHSLGIPARLTMLAVVTALPLVAVGSFAIL
Ga0073928_101639061	3300006893	Iron-Sulfur Acid Spring	MRLFVRCRSFGIQARLTMLAVATALPLVALASFDILRT
Ga0099792_103859631	3300009143	Vadose Zone Soil	MVIFARRRTLGIQARLTLLTLVTALPLVALASFAILRTVDDQRAQIQRDV
Ga0126374_118012321	3300009792	Tropical Forest Soil	MKILLRGHSLGIPARLTLLALVTALPLVAVGSFAILRTVDDQRAQIQN
Ga0126373_107079842	3300010048	Tropical Forest Soil	MKILLRRHSLGIPARLTLLALVTALPLVAVGSFAILRTVDDQR
Ga0126373_120958021	3300010048	Tropical Forest Soil	MPILLRRYSWGIQARLTVLALVTALPLVALASFAVLRT
Ga0126370_103043331	3300010358	Tropical Forest Soil	MKISLRGHSLGIPARLTMLALVTALPLVAVGSFAILRTVDDQRAQIQGDLKQMVESF
Ga0126378_107946112	3300010361	Tropical Forest Soil	MKILLRRHSLGIPARLTMLAVVTALPLVAVGSFAILRAVED
Ga0126378_109176651	3300010361	Tropical Forest Soil	MQILLRQHSWGIQARLTMLALVTAVPLVVGASFAI
Ga0126381_1001077411	3300010376	Tropical Forest Soil	MRIFVRGHSLGIPARLTMLALVTALPLVAVGSFAILRTVDDQRAQIQ
Ga0126381_1010366631	3300010376	Tropical Forest Soil	MKILLRRHSLGIPARLTMLAVVTALPLVAVGSFAILRTVDDERAQMQNDVTQMVE
Ga0126381_1019005641	3300010376	Tropical Forest Soil	MKRLLRRHSLGIPARLTMLAVVTALPLVAVGSFAILRTVDDERAQMQNDVTQMVE
Ga0126381_1042358162	3300010376	Tropical Forest Soil	MKIFLRRHSLGIPARLNMLAVVTALPLVAVGSFAILRTVDDQRTQMQSDLKQ
Ga0126383_124863701	3300010398	Tropical Forest Soil	MGLFVRRTFGIQARLMMLAVVTALPLVALGSLFILRMVE
Ga0137392_103201521	3300011269	Vadose Zone Soil	MKIFLRPHSLGIQARLTMLALVTALPLVAVGSFAILRTVDDQRAQIQNDVKQMVESF
Ga0137391_103923131	3300011270	Vadose Zone Soil	MMIFAPRRTLGIQARLTLLTLVTALPLVALASFAILRTVDDQRAQIQRDVR
Ga0137391_109014831	3300011270	Vadose Zone Soil	MRLFVRRRSLGIQARLTMLAVATALPLVVLVGFAILQM
Ga0137391_109633991	3300011270	Vadose Zone Soil	MKRFLRRHSLGIPARLTMLAVVTALPLVAVGSFAILRTVDDQRAQIQN
Ga0137391_113081982	3300011270	Vadose Zone Soil	MVIFARRRTLGIQARLTLLTLVTALPLVALASFAILRTVDDQRAQIQRDVR
Ga0137393_104131583	3300011271	Vadose Zone Soil	MRLFVRGRSLGIQARLTVLAVATALPLVVLAGFAILRMVDDQRTQIKQDV
Ga0137393_105440111	3300011271	Vadose Zone Soil	MKTFLRRHSLGIPARLTMLALVTALPLVAVGSFAIL
Ga0137363_110881131	3300012202	Vadose Zone Soil	MRLFVRGRSLGIQARLTVLAVATALPLVALAGFAILRMVDDQRTQIKQDVEHR
Ga0137363_117350771	3300012202	Vadose Zone Soil	MKRFLRRNSLGIPARLTMLAVVTALPLVAVGSFAILRTVDDQRVQIKNDVKQMVE
Ga0137378_116283142	3300012210	Vadose Zone Soil	MKILLRRHSLGIQARLTMLVLVTALPLVAVGSFAILRTVDD
Ga0137390_106992233	3300012363	Vadose Zone Soil	MRLFVRGRSLGIQARLTVLAVATALPLVALAGFAILR
Ga0137390_109721652	3300012363	Vadose Zone Soil	MPILLRRHSWGIQARLTMLALVTALPLVAAASFAILRTVDDQRT
Ga0150984_1161963991	3300012469	Avena Fatua Rhizosphere	MRLFVRRRSFGVQARLTMLAVVTALPLVALASWAILRMVDDQRTQIQLEVKQ
Ga0137396_108621491	3300012918	Vadose Zone Soil	MQIWRRHTLGIQARLTMLALMTALPLVVLASFAILRTVDDQRAQLQ
Ga0137394_115881962	3300012922	Vadose Zone Soil	MKILLRGYSLGIPARLTMLALVTALPLVAVGSFAI
Ga0137359_109791951	3300012923	Vadose Zone Soil	MRLFVRGRSLGIQARLTVLAVATALPLVALAGFAILRMVDDQRTQ
Ga0137416_119722192	3300012927	Vadose Zone Soil	MRLFVRRRSFGVQARLTMLAVVTALPLVALASWAI
Ga0126369_100474164	3300012971	Tropical Forest Soil	MQIVSRRRTLGIQARLTVMALVTALPLVAVASFAILRTVDDQRAQIQSDVRQMV
Ga0126369_103338771	3300012971	Tropical Forest Soil	MKILLRGHSLGIPARLTLLALVTALPLVAVGSFAILRTVDDQRAQIQNDVK
Ga0126369_119061541	3300012971	Tropical Forest Soil	MQILLRQHSWGIQARLTMLALVTAVPLVVGASFAILRTVDDQRAQIQSNV
Ga0182033_100410891	3300016319	Soil	MQIFARPHSVGIQARLTILALVTALPLVALASFAILRTVDDQRAQVQRDVRERAEGL
Ga0182033_108341451	3300016319	Soil	MTMFQRGHSLGIPARLTMLALVTALPLVAVGSFAI
Ga0182037_108757492	3300016404	Soil	MKILLRRHSLGIPARLTILALVTALPLVAVGSFAILRTVDDQRAQI
Ga0182038_106147561	3300016445	Soil	MKILLRSHSLGIPARLTMLALVTALPLVAVGSFAI
Ga0066669_115165963	3300018482	Grasslands Soil	VRGRSLGIQARLTVLAVATALPLVALSRFAILRMVEDERTQITPDIEH
Ga0210403_113942021	3300020580	Soil	MRLFVRSRSFGIQARLTMLAVATALPLVALASFAV
Ga0210401_106854272	3300020583	Soil	MRLFVRRRSFGIQARLTMLAVVTAMPLVALASFAILRTVDDQRTQIQQDIRQRA
Ga0210400_116112382	3300021170	Soil	MKIFLRRHSLGIPARLTMLAVVTALPLVAMGSFAILRTVDDQRAQI
Ga0210408_101345101	3300021178	Soil	MKILLRRHSLGIQARLTMLVLVTALPLVAVGSFAILRTVDDQ
Ga0210396_106021091	3300021180	Soil	MRLFVRRRSFGIQARLTMLAVVTALPLVALASFAI
Ga0213882_103951682	3300021362	Exposed Rock	MRVSLRRHTVGIQARLTMLVLVTALPLLGLASFAVLRTVDDHRAELQRDI
Ga0210386_114798802	3300021406	Soil	MRLFVRRRSFGVQARLTMLAVVTALPLVALAGWAILRMVDDQRTQIQLDVKQRVEDLL
Ga0210384_105688541	3300021432	Soil	MKRFLRRHSLGIPARLTMLAVVTALPLVVVGSFAILRTVDDQRAQIQ
Ga0210384_106114562	3300021432	Soil	MRLFVRGRSLGIQARLTVLAVATALPLVVLAGFAILRMVDDQRTQIKHDVERQVENLLWD
Ga0210384_106585012	3300021432	Soil	MKLFVERRTFGIQARLAMLAVVTAMPLFALASFAVLRMVDHQRAQ
Ga0210384_110089452	3300021432	Soil	MKIFLRGYSLGIPARLTMLALVTALPLVAVGSFAI
Ga0210390_102022311	3300021474	Soil	MRLFVRRRSFGIQARLTMLAVATALPLVALASWAILRMVDDQRTQ
Ga0210402_109579651	3300021478	Soil	MMIFARRRTLGIQARLTLLTLVTALPLVALASFAILRTVDDQRAQIQRDVKDRVEGM
Ga0210410_105383752	3300021479	Soil	MKILLRGHSLGILARLSMLALVTALPLVAVGSFAILRTVHDQRAQIQNDVKQMV
Ga0210409_108931162	3300021559	Soil	MKILLRGHSLGILARLSMLALVTALPLVAVGSFAILRTVH
Ga0126371_101220801	3300021560	Tropical Forest Soil	MGLFVRRTFGIQARLMMLAVVTALPLVALGSLFILRMVED
Ga0222728_10136613	3300022508	Soil	MRLFVRRRSFGIQARLTMLAVVTALPLVALASFAILRVVDNQRTQIQ
Ga0242668_10893501	3300022529	Soil	MRLFVRSRSFGIQARLTMLAVATALPLVALASFAVLRMV
Ga0242655_101895461	3300022532	Soil	MRLFVRRRSFGIQARLTMLAVATALPLVALASWAILRMVDDQRTQIQLDVKQRVED
Ga0242670_10231262	3300022708	Soil	MRLFVRRRSFGIQARLTMLAVVTALPLVALAGFAIL
Ga0242653_10113343	3300022712	Soil	MRLCVRRRSFGIQARLTMLAVATALPLVALASWAILRMVDDQRTQIQLDVKQRV
Ga0242657_11444002	3300022722	Soil	MRLFVRRRSFGIQARLTMLAVVTALPLAGFAILRVVD
Ga0242654_100064434	3300022726	Soil	MKLFVERRTFGIQARLAMLAVVTAMPLFALASFAVLRMVDHQRAQIKQDVR
Ga0207693_100631824	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFVRRRSFGIQARLTMLAVVTALPLVALASFAILHVVDNQRTQIQLDVKQRVEDLLA
Ga0207700_102857091	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFVRRRSFGVQARLTMLAVVTALPLVALASWAILRMVDDQRTQIQLDVKQRVEDLLAD
Ga0257160_10045741	3300026489	Soil	MKIFLRGYSLGIPARLTMLALVTALPLVAVGSFAILRSVDDERAQIQ
Ga0257161_10298903	3300026508	Soil	MKIFLRGYSLGIPARLTMLALVTALPLVAVGSFAILRSVDDERAQIQSDVKQMVE
Ga0209056_104318852	3300026538	Soil	MRLFVRRRTFGIQAWLTMLAVVTALPLVSLASFTILRM
Ga0179587_105128061	3300026557	Vadose Zone Soil	MQIWRRHTLGIQARLTMLALMTALPLVVLASFAILRTVDD
Ga0209622_10568162	3300027502	Forest Soil	MRLFVRRRSFGIQARLTMLAVVTAMPLVALASFAILRTV
Ga0207826_11238891	3300027680	Tropical Forest Soil	MQVFLLRHSWGIQARLTMLALATALPLVALASFAILQAVDDQRTQIQRDVQQTVESFL
Ga0222749_108239432	3300029636	Soil	MRLFVRRRSFGIQARLTMLAVATALPLVALASWAILRMVDDQRTQIQL
Ga0170824_1027788571	3300031231	Forest Soil	MKILLRGHSLGIPARLTMLALVTALPLVAVGSFPILRSVDDQRAK
Ga0170824_1070115051	3300031231	Forest Soil	MKILLRGHSLGIPARLTMLALVTALPLVAVGSFAILRTVDDQRA
Ga0170824_1083447361	3300031231	Forest Soil	MKIFLRRYSLGIPARLTMLAVVTALPLVAVGSFAILRTVDDQRVQIQNDVKQMVESF
Ga0318538_107309571	3300031546	Soil	MRLLVRRRSFSIQARLTMLAVATALPLVALVGFGILRVVDDERTQIQQGV
Ga0318515_105690572	3300031572	Soil	MQIFARPHSVGIQARLTILALVTALPLVALASSAILRTVDDQRAQVQRDVRERAEGLLA
Ga0310915_103232591	3300031573	Soil	MRLFVRRRSFGIQARLIMLAVATALPLVALASFAILRTVDDQRTQIQRDVRERAED
Ga0318561_104123782	3300031679	Soil	MKILLRGHRLGIPARLTMLALVTALPLAAVGSFAILRSV
Ga0318574_100107251	3300031680	Soil	MQIFLRRHSFGIQARLTLQALVTALPLVGLASFAILRTV
Ga0318496_103890053	3300031713	Soil	MKILQRGHSSGIPARLTMLALVTALPLVAVGSFAILRAVDD
Ga0307476_106776651	3300031715	Hardwood Forest Soil	MRLFVRRRSFGIQARLTMLAVVTAMPLVALASFAILRTVDDQRTQIQQDIR
Ga0306917_113469772	3300031719	Soil	MRVFRRRHSLGIPTRLTMLALVTALPLVAVGSFAILR
Ga0318500_104227222	3300031724	Soil	MQIFARPHSVGIQARLTILALVTALPLVALASSAILRTVDDQRAQVQRDVRER
Ga0318502_100593811	3300031747	Soil	MQIFARPHSVGIQARLNILALVTALPLVALASSAILRTVDDQRAQVQRDVRERAEG
Ga0318494_109120861	3300031751	Soil	MQIFARPHSVGIQARLTILALVTALPLVALASSAILRTVDDQRAQVQRD
Ga0307475_108424192	3300031754	Hardwood Forest Soil	MKILLCCHTPGIQARLTMLALVTALPLFALACFAILRTVDDQRAKM
Ga0318537_102815441	3300031763	Soil	MKILLRGHSLGIPARLTMLALVTALPLVAVGSFAILRSVDDQRAQMQ
Ga0318554_100111741	3300031765	Soil	VTRILRRRHTLGIQARLTLLTLVTVLPLVALASITMLRMVDDRRAQIESDVRQRIGSFLA
Ga0318548_100815541	3300031793	Soil	MQIFLRRHSFGIQARLTLQALVTALPLVGLASFAILRTVDDQRAQIESDVKQMAES
Ga0318550_101687773	3300031797	Soil	MQVFLLRHSWGIQARLTMLALATALPLVALASFAILQAVDDQRTQIQRDVQQTV
Ga0318550_103864981	3300031797	Soil	MKILLRGHRLGIPARLTMLALVTALPLVAVGSFAILRSVDDQRAQMQSDV
Ga0318523_104955691	3300031798	Soil	MQIFLRRHSFGIQARLTLQALVTALPLVGLASFAILRTVDDQRAQIESDVK
Ga0318497_104256182	3300031805	Soil	MKILQRGHGLGIPARLTMLALVTALPLVAVGSFAILRAVDDQRAQMQSDVK
Ga0318568_104539691	3300031819	Soil	MKILLRRHSLGIPARLTILAVVTALPLVAVGSFAILRTVDDERAQIQNDVT
Ga0318511_100209214	3300031845	Soil	MRVFRRRHSLGIPTRLTMLALVTALPLVAVGSFAILRTVDNQRVQMQ
Ga0318511_104267661	3300031845	Soil	MQVFLLRHSWGIQARLTMLALATALPLVALASFAILQAVDDQRTQIQRDVQQTVESFLAD
Ga0318512_104768592	3300031846	Soil	MQVFLLRHSWGIQARLTMLALATALPLVALASFAILQAVDDQRTQIQR
Ga0318512_107028162	3300031846	Soil	MKIFLRRHTLGIQARLTMLALVTALPLVALASFSILRTVDDQRALMQRDVRERV
Ga0306919_108820941	3300031879	Soil	MKILLRRHSLGIPARLTILALVTALPLVAVGSFAILRTVDDQRAQ
Ga0318544_101883882	3300031880	Soil	MQIFLRRHSFGIQARLTLQALVTALPLVGLASFAILRTVDD
Ga0318544_104329062	3300031880	Soil	MKILLRRHSLGIPARLTILAVVTALPLVAVGSFAILR
Ga0306925_101400053	3300031890	Soil	MTMFQRGHSLGIPARLTMLALVTALPLVAVGSFAILRSV
Ga0318551_109396581	3300031896	Soil	MKILLRGHSLGIPARLTMLALVTALPLVAVGSFAILRTVDDQRAQIQSDVKQMVE
Ga0318520_108916201	3300031897	Soil	MKILLRRHSLGIPARLTILAVVTALPLVAVGSFAILRTVDD
Ga0306923_103591801	3300031910	Soil	MTILFRRHTLSVAARLTMLALSTALPLVALAGFVILRAVDDQRAQIQRDVRER
Ga0306921_114564011	3300031912	Soil	MTMFQRGHSLGIPARLTMLALVTALPLVAVGSFAILRSVDDQRA
Ga0310912_111407432	3300031941	Soil	MRLFVRRRSFGIQARLIMLAVATALPLVALASFAILRTVDDQRTQIQRDVRERAEDLLAD
Ga0310916_106954872	3300031942	Soil	MTILFRRHTLSIAARLTMLALSTALPLVALAGFFILRAVDDQRAQIQRD
Ga0310910_111564832	3300031946	Soil	MKIFLRRHTLGIQARLTMLALVTALPLVALASFSILRTVDDQRA
Ga0310909_100538711	3300031947	Soil	MRVFRRRHSLGIPTRLTMLALVTALPLVAVGSFAILRT
Ga0318530_103447182	3300031959	Soil	MQIFARPHSVGIQARLTILALVTALPLVALASSAIL
Ga0318531_104237151	3300031981	Soil	MNIVPRHHNLGIPARLTMLALVTALPLVAGGSFAILRTVDDERAQIQSDVK
Ga0318531_105555941	3300031981	Soil	MKILLRGHSLGIPARLTMLALVTALPLVAVGSFAILRTVDDQRAQI
Ga0318556_101467083	3300032043	Soil	MQIFLRRHSFGIQARLTLQALVTALPLVGLASFAILRTVDDQRAQIE
Ga0318506_104006051	3300032052	Soil	MQIFARPHSVGIQARLNILALVTALPLVALASSAILRTVDDQRAQVQRDVRERAE
Ga0318570_102943202	3300032054	Soil	MQVFLLRHSWGIQARLTMLALATALPLVALASFAILQ
Ga0318575_100294091	3300032055	Soil	MRVFRRRHSLGIPTRLTMLALVTALPLVAVGSFAILRTVDNQRVQIQNDVRQM
Ga0318533_105549131	3300032059	Soil	MKILQRGHSLGIPARLTMLALVTALPLVAVGSFAIL
Ga0318505_104982462	3300032060	Soil	MRLFVRRRSFGIQARLIMLAVATALPLVALASFAILRTVDDQRTQ
Ga0318504_104489611	3300032063	Soil	MKILLRGHSLGIPARLTMLALVTALPLVAVGSFAILRTVDDQRAQIQS
Ga0318513_104524742	3300032065	Soil	VTRILRRRHTLGIQARLTLLTLVTVLPLVALASITMLRMVDDRRAQIESDVRQ
Ga0306924_105574861	3300032076	Soil	MKILLRRHSLGIPARLTILALVTALPLVAVGSFAILRTVDDQRAQIQNDVKQMVESFL
Ga0307471_1012036041	3300032180	Hardwood Forest Soil	MKILLRGHRLGIPARLTMLALVTALPLVAVGSFAILRTVDE
Ga0307471_1022832401	3300032180	Hardwood Forest Soil	MRLFVRRRSFGIQARLTMLAVVTALPLVALASFAILRVVDDQRTQIQLD
Ga0306920_1010081641	3300032261	Soil	MKIFLRRHTLGIQARLTMLALVTALPLVALASFSILRTVDDQRALMQRDVRER
Ga0310914_103080551	3300033289	Soil	VRRRSFSIQARLTMLAVATALPLVALVGFGILRVVD
Ga0310914_104146433	3300033289	Soil	MRLFVRRRSFGIQARLIMLAVATALPLVALASFAILRTVDD