Metagenome / Metatranscriptome Family F052960

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052960
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	99 residues
Representative Sequence	MSFRIGIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Number of Associated Samples	125
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.90 %
% of genes near scaffold ends (potentially truncated)	38.73 %
% of genes from short scaffolds (< 2000 bps)	83.80 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.085 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (37.324 % of family members)
Environment Ontology (ENVO)	Unclassified (36.620 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.408 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.71% β-sheet: 22.55% Coil/Unstructured: 62.75%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00213	OSCP	56.34
PF02874	ATP-synt_ab_N	7.75
PF00430	ATP-synt_B	5.63
PF00137	ATP-synt_C	2.11
PF00496	SBP_bac_5	1.41
PF00119	ATP-synt_A	1.41
PF00231	ATP-synt	0.70
PF00464	SHMT	0.70
PF08352	oligo_HPY	0.70
PF00528	BPD_transp_1	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0712	FoF1-type ATP synthase, delta subunit	Energy production and conversion [C]	56.34
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	5.63
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	2.11
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	1.41
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.70
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.70
COG0224	FoF1-type ATP synthase, gamma subunit	Energy production and conversion [C]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.79 %
Unclassified	root	N/A	35.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.79 %
Unclassified	root	N/A	35.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.08 %
Unclassified	root	N/A	35.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.23 %
Unclassified	root	N/A	35.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.52 %
Unclassified	root	N/A	35.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.44 %
Unclassified	root	N/A	35.21 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	11.27 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	38.73 %
Unclassified	root	N/A	35.21 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9.15 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.73 %
Unclassified	root	N/A	35.21 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.41 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.73 %
Unclassified	root	N/A	35.21 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.41 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.73 %
Unclassified	root	N/A	35.21 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.41 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_11049853	Not Available	545	Open in IMG/M
3300001361\|A30PFW6_1498455	Not Available	532	Open in IMG/M
3300001535\|A3PFW1_10082348	Not Available	624	Open in IMG/M
3300004156\|Ga0062589_100090916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1903	Open in IMG/M
3300004157\|Ga0062590_102566322	Not Available	541	Open in IMG/M
3300004480\|Ga0062592_100061329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2113	Open in IMG/M
3300005332\|Ga0066388_100325257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2184	Open in IMG/M
3300005334\|Ga0068869_100396668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
3300005337\|Ga0070682_102056813	Not Available	503	Open in IMG/M
3300005356\|Ga0070674_100594886	Not Available	934	Open in IMG/M
3300005439\|Ga0070711_100407304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300005440\|Ga0070705_100316370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300005444\|Ga0070694_100550158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300005457\|Ga0070662_100055035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2886	Open in IMG/M
3300005536\|Ga0070697_100276499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1440	Open in IMG/M
3300005549\|Ga0070704_100252347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1449	Open in IMG/M
3300005843\|Ga0068860_100467322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1256	Open in IMG/M
3300006577\|Ga0074050_11388317	Not Available	607	Open in IMG/M
3300006581\|Ga0074048_13004314	Not Available	702	Open in IMG/M
3300006871\|Ga0075434_100511140	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300007820\|Ga0104324_124191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1755	Open in IMG/M
3300009090\|Ga0099827_10545667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300009093\|Ga0105240_10886960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300009094\|Ga0111539_10473470	Not Available	1458	Open in IMG/M
3300009094\|Ga0111539_11080326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300009098\|Ga0105245_10036533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4364	Open in IMG/M
3300009100\|Ga0075418_10449988	Not Available	1380	Open in IMG/M
3300009147\|Ga0114129_12307085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300009147\|Ga0114129_12900581	Not Available	567	Open in IMG/M
3300009156\|Ga0111538_11667087	Not Available	803	Open in IMG/M
3300009162\|Ga0075423_10488758	Not Available	1294	Open in IMG/M
3300009789\|Ga0126307_10008624	All Organisms → cellular organisms → Bacteria	7330	Open in IMG/M
3300009789\|Ga0126307_11169171	Not Available	623	Open in IMG/M
3300010036\|Ga0126305_10098135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1755	Open in IMG/M
3300010039\|Ga0126309_10001596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8107	Open in IMG/M
3300010039\|Ga0126309_10165910	Not Available	1198	Open in IMG/M
3300010040\|Ga0126308_10235454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1186	Open in IMG/M
3300010040\|Ga0126308_10324150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1016	Open in IMG/M
3300010154\|Ga0127503_10438813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1572	Open in IMG/M
3300010360\|Ga0126372_11390114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300010371\|Ga0134125_10278784	Not Available	1857	Open in IMG/M
3300010375\|Ga0105239_11055740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300010396\|Ga0134126_10651491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1201	Open in IMG/M
3300011994\|Ga0120157_1013849	Not Available	2050	Open in IMG/M
3300012003\|Ga0120163_1035187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1316	Open in IMG/M
3300012005\|Ga0120161_1056744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1088	Open in IMG/M
3300012008\|Ga0120174_1014122	All Organisms → cellular organisms → Bacteria	2665	Open in IMG/M
3300012011\|Ga0120152_1002471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9428	Open in IMG/M
3300012014\|Ga0120159_1007457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4937	Open in IMG/M
3300012201\|Ga0137365_10372006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1055	Open in IMG/M
3300012204\|Ga0137374_10008997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11807	Open in IMG/M
3300012204\|Ga0137374_10014109	All Organisms → cellular organisms → Bacteria	9264	Open in IMG/M
3300012208\|Ga0137376_10804555	All Organisms → cellular organisms → Archaea	809	Open in IMG/M
3300012208\|Ga0137376_11133082	Not Available	669	Open in IMG/M
3300012211\|Ga0137377_11320437	Not Available	651	Open in IMG/M
3300012350\|Ga0137372_10727600	Not Available	716	Open in IMG/M
3300012356\|Ga0137371_10192232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1599	Open in IMG/M
3300012487\|Ga0157321_1024974	Not Available	574	Open in IMG/M
3300012488\|Ga0157343_1004380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300012507\|Ga0157342_1002188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1557	Open in IMG/M
3300012937\|Ga0162653_100023642	Not Available	845	Open in IMG/M
3300012938\|Ga0162651_100073288	Not Available	565	Open in IMG/M
3300012951\|Ga0164300_10163897	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300012957\|Ga0164303_10432010	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300012961\|Ga0164302_10639102	Not Available	778	Open in IMG/M
3300013763\|Ga0120179_1023872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1489	Open in IMG/M
3300013768\|Ga0120155_1085976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300013772\|Ga0120158_10003500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17294	Open in IMG/M
3300014058\|Ga0120149_1219433	Not Available	533	Open in IMG/M
3300014827\|Ga0120171_1019766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2653	Open in IMG/M
3300014829\|Ga0120104_1007947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1862	Open in IMG/M
3300015077\|Ga0173483_10627775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300015371\|Ga0132258_12641753	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1254	Open in IMG/M
3300018000\|Ga0184604_10145841	Not Available	776	Open in IMG/M
3300018027\|Ga0184605_10405219	Not Available	608	Open in IMG/M
3300018027\|Ga0184605_10429070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300018028\|Ga0184608_10087700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1284	Open in IMG/M
3300018061\|Ga0184619_10099282	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300018066\|Ga0184617_1086533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300018066\|Ga0184617_1171024	Not Available	644	Open in IMG/M
3300018076\|Ga0184609_10404162	Not Available	634	Open in IMG/M
3300018081\|Ga0184625_10013082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3856	Open in IMG/M
3300018465\|Ga0190269_11133658	Not Available	607	Open in IMG/M
3300019869\|Ga0193705_1033787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1094	Open in IMG/M
3300019869\|Ga0193705_1066948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300019873\|Ga0193700_1022709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1036	Open in IMG/M
3300019878\|Ga0193715_1016525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1596	Open in IMG/M
3300020018\|Ga0193721_1089131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300020059\|Ga0193745_1049703	Not Available	919	Open in IMG/M
3300021510\|Ga0222621_1126697	Not Available	543	Open in IMG/M
3300022694\|Ga0222623_10384555	Not Available	534	Open in IMG/M
3300022756\|Ga0222622_10039895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2578	Open in IMG/M
3300025934\|Ga0207686_10916631	Not Available	708	Open in IMG/M
3300025935\|Ga0207709_10146751	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300025972\|Ga0207668_10153956	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300026078\|Ga0207702_11782893	Not Available	608	Open in IMG/M
3300026118\|Ga0207675_100013194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7711	Open in IMG/M
3300028705\|Ga0307276_10021057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1279	Open in IMG/M
3300028708\|Ga0307295_10228353	Not Available	532	Open in IMG/M
3300028710\|Ga0307322_10167340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300028711\|Ga0307293_10136588	Not Available	780	Open in IMG/M
3300028711\|Ga0307293_10259406	Not Available	552	Open in IMG/M
3300028713\|Ga0307303_10021939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1229	Open in IMG/M
3300028716\|Ga0307311_10003452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3492	Open in IMG/M
3300028716\|Ga0307311_10114313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300028717\|Ga0307298_10135251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300028718\|Ga0307307_10244699	Not Available	572	Open in IMG/M
3300028719\|Ga0307301_10198344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300028720\|Ga0307317_10057957	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300028720\|Ga0307317_10265103	Not Available	580	Open in IMG/M
3300028722\|Ga0307319_10216685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300028755\|Ga0307316_10057719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1312	Open in IMG/M
3300028768\|Ga0307280_10036885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1486	Open in IMG/M
3300028771\|Ga0307320_10319064	Not Available	618	Open in IMG/M
3300028778\|Ga0307288_10056204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1365	Open in IMG/M
3300028782\|Ga0307306_10235847	Not Available	532	Open in IMG/M
3300028784\|Ga0307282_10451733	Not Available	623	Open in IMG/M
3300028787\|Ga0307323_10001031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8800	Open in IMG/M
3300028787\|Ga0307323_10258446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300028793\|Ga0307299_10102974	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300028793\|Ga0307299_10274996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300028807\|Ga0307305_10146052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300028810\|Ga0307294_10381447	Not Available	526	Open in IMG/M
3300028811\|Ga0307292_10016633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2553	Open in IMG/M
3300028811\|Ga0307292_10436497	Not Available	558	Open in IMG/M
3300028814\|Ga0307302_10023329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2814	Open in IMG/M
3300028824\|Ga0307310_10009256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3751	Open in IMG/M
3300028872\|Ga0307314_10013682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1782	Open in IMG/M
3300028875\|Ga0307289_10044054	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300028880\|Ga0307300_10162663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300028880\|Ga0307300_10214946	Not Available	627	Open in IMG/M
3300028884\|Ga0307308_10248466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300028885\|Ga0307304_10100994	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300030905\|Ga0308200_1063492	Not Available	718	Open in IMG/M
3300031058\|Ga0308189_10216660	Not Available	703	Open in IMG/M
3300031091\|Ga0308201_10041473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300031092\|Ga0308204_10112434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300031114\|Ga0308187_10347584	Not Available	571	Open in IMG/M
3300031938\|Ga0308175_100044326	All Organisms → cellular organisms → Bacteria	3800	Open in IMG/M
3300031996\|Ga0308176_10204455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1860	Open in IMG/M
3300032205\|Ga0307472_101841364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300033550\|Ga0247829_11213412	Not Available	625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.10%
Host-Associated	Host-Associated	16.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.94%
Plants	Host-Associated → Plants	16.90%
Aquatic	Environmental → Aquatic	9.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.27%
Sediment	Environmental → Aquatic → Sediment	8.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.63%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.41%
Freshwater	Environmental → Aquatic → Freshwater	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.45%
Loam	Environmental → Terrestrial → Soil → Loam	4.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.11%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.41%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.11%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.11%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	37.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	9.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.63%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.41%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.41%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007820	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-12-2 Soapdenovo	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_110498532	3300000953	Soil	MNAIVSFRIGFPGYLKAVTALCALFLLGGCGGSSSSTTSDVEKAIRVRNPDSSQITCENHGRYRGAKLYRCKMDVATSVREMRPESSCYTLEDGRLENVTRHVSC*
A30PFW6_14984552	3300001361	Permafrost	VLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
A3PFW1_100823482	3300001535	Permafrost	VLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPELSCYTFEHGKLDNVTRHVSC*
Ga0062589_1000909162	3300004156	Soil	VSFRIGFPGYLKAVAALCALFLLGGCGGSSASTTSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCSLDVATGVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0062590_1025663222	3300004157	Soil	VSFRIGFPGYLKAVAALCAFFLLGGCGGSSASTTSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCSLDVATGVREMRPESSCYTLEDGRLE
Ga0062592_1000613292	3300004480	Soil	VSFRIGFPGYLKAVAALCAFFLLGGCGGSSASTTSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCSLDVATGVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0066388_1003252572	3300005332	Tropical Forest Soil	MNRTVIFLIRPGGYRTVAAVFGAVLLLAGCGGSSSSSSISDVENAISVRSPDSSEVHCERHGTTDGKALYRCVLDVPVSVREMRPETSCYTFEDGKLDNVTRHVSC*
Ga0068869_1003966682	3300005334	Miscanthus Rhizosphere	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTTDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC*
Ga0070682_1020568131	3300005337	Corn Rhizosphere	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQVTCMQHGEYQGAKLYRCRMDVATSVREMRPDSSCYTLEDGRLENVTRHVSC*
Ga0070674_1005948862	3300005356	Miscanthus Rhizosphere	MNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQETCMRHGEYQGAKLYRCRMDVATSVREMRPDSSCYTLEDGRLENVTRHVSC*
Ga0070711_1004073042	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQVTCMRHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC*
Ga0070705_1003163702	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQVTCMQHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC*
Ga0070694_1005501581	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTSDVEKAILVRTPDSSQVTCMQHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC*
Ga0070662_1000550351	3300005457	Corn Rhizosphere	MPACAGAAASKASDTMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTSDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC
Ga0070697_1002764993	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPACAGAAANKPSETMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTTDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPDSSCYTLEDGRLENVTRHVSC
Ga0070704_1002523471	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	FRIGIPGYLKAVAALGAVLLLGGCGGSSASNTSDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0068860_1004673222	3300005843	Switchgrass Rhizosphere	MPACAGAAASKPSETMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQVTCMRHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC
Ga0074050_113883172	3300006577	Soil	MSFRIGIPGYLKAVAALGAVVLLGGCGGSSAVKTSDVEKAILVRSLDSSQATCELHGHYQGKTLYRCKSDVATSVRQMRPESSCYTFEDGRLENVTRHVSC*
Ga0074048_130043142	3300006581	Soil	MSFRIGIPGYLKAVAALGAVVLLGGCGGSSAVKTSDVEKAILVRSPDSSQATCELHGHYQGKTLYRCKSDVATSVRQMRPESSCYTFEDGRLENVTRHISC*
Ga0075434_1005111401	3300006871	Populus Rhizosphere	PGYLKAVTALCALFLLSGCGGSSASTTSDVEKAIRVRNPDSSQITCEDHGQYRGAKVYRCKMDVATSVREMRPESSCYTLVDGRLDNVTRHVSC*
Ga0104324_1241912	3300007820	Soil	MSFRIGIPGYLKAVTAFGALLLLAGCGGGSSTAKTSDVEKAILVRSPDSSQAICERHGSYQGKTLFRCKADVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0099827_105456672	3300009090	Vadose Zone Soil	MISFRIGSPGYRRAAAAIGALWLLAGCGSSGSSSKISDVERAVQVRSPDSSHVRCEARDTTAGKRFYRCHLDVPVSVREMRPEMSCYTFEHGRLQDVTRHVSC*
Ga0105240_108869602	3300009093	Corn Rhizosphere	MNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTSDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPDSSCYTLEDGRLENVTRHVSC*
Ga0111539_104734702	3300009094	Populus Rhizosphere	MNATVSFRIGFPGYLKAGAALCGFFLLGGCGGSSASTSSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCSLDVATGVREMRPESSCYTLEDGRLANVTRHVSC*
Ga0111539_110803261	3300009094	Populus Rhizosphere	MNATVSFRIGFPGYLKAVTALCALLLLGGCGGSSASTTSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCKVDVATSVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0105245_100365339	3300009098	Miscanthus Rhizosphere	ASDTMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTTDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPDSSCYTLEDGRLENVTRHVSC*
Ga0075418_104499882	3300009100	Populus Rhizosphere	MNATVSFRIGFPGYLKAVTALCALLLLGGCGGSSASTSSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCKVDVATSVREMRPESSCYTLVDGRLDNVTRHVSC*
Ga0114129_123070851	3300009147	Populus Rhizosphere	IAACAGAAASSASETMNATVSFRIGFPGYLKAVAALCAFFLLGGCGGSSASTTSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCSLDVATGVREMRPESSCYTLEDGRLANVTRHVSC
Ga0114129_129005812	3300009147	Populus Rhizosphere	LCALFLLSGCGGSSASTTSDVEKAIRVRNPDSSQITCEDHGQYRGAKVYRCKMDVATSVREMRPESSCYTLVDGRLDNVTRHVSC*
Ga0111538_116670872	3300009156	Populus Rhizosphere	MNATVSFRIGFPGYLKAVAALCAFFLLGGCGGSSASTTSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCRLDVATGVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0075423_104887583	3300009162	Populus Rhizosphere	MNATVSFRIGFPGYLKAGAALCGFFLLGGCGGSSASTSSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCRLDVATGVREMRPE
Ga0126307_1000862410	3300009789	Serpentine Soil	MSIRIGIPGYLKAVAVLGALLVLAGCGGRSSTAKTSDVEKAILVRSPDSSEVTCMRHGSYQGKALFRCQADVATSVREMRPESSCYTFEHGRLDNVTRHVSC*
Ga0126307_111691712	3300009789	Serpentine Soil	MNAIMSFRIRNPGYLKAVAVLGALLVLAGCGGGSSAAKTSDVEKAILVRSPDSSEVTCMRHGSYRGKTLFRCQTDVATSVREMRPESSCYTFEHGRLDNVTRHVSC*
Ga0126305_100981352	3300010036	Serpentine Soil	LGALLVLAGCGGRSSTAKTSDVEKAILVRSPDSSEVTCMRHGSYQGKALFRCQADVATSVREMRPESSCYTFEHGRLDNVTRHVSC*
Ga0126309_100015963	3300010039	Serpentine Soil	MSFRIGIPGYLKATVVLGVLVVLAGCGGGSSAAKTSDVEKAILVRSPDSSQVTCMRHGSYHGKVLFRCQADVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0126309_101659102	3300010039	Serpentine Soil	MNATVSFRIGTPGYLTAVAALSSFSLLVGCGGSSGSTVSDVEKAVGVRSPDSSDIRCEEHGDFDDQTLYRCRADVPSNNRAMRPAFSCYTFEDGRLENVT
Ga0126308_102354543	3300010040	Serpentine Soil	MNAIMSFRIGIPGYLKAVAALAALLVLAGCGGGSSASKTSDVEKAILVRSPDSSEVTCMRHGSYQGKTLFRCQTDVATSVREMRPESSCYTFEHGKLDNVTRH
Ga0126308_103241501	3300010040	Serpentine Soil	AGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0127503_104388132	3300010154	Soil	MKAIMSFRIGIPGYLKAVAALGAVLLLGGCGGSSAVKTSDVEKAILVRSPDSSQATCELHGHYQGKTLYRCKSDVATSVRQMRPESSCYTFEDGRLENVTRHVSC*
Ga0126372_113901142	3300010360	Tropical Forest Soil	MNAIVSFRIGFPGYLTAVAALCALFLLSGCGGSSASTTSDVEKAIRVRNPDSSRVTCEDHGHYRGAKLYRCRLDVATGVREMRPESSCYTLEDGKLENVTRHVSC*
Ga0134125_102787842	3300010371	Terrestrial Soil	MNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTTDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0105239_110557402	3300010375	Corn Rhizosphere	VSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTTDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0134126_106514911	3300010396	Terrestrial Soil	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKSSDVEKAILVRTPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC*
Ga0120157_10138492	3300011994	Permafrost	MSFRIGIPGYLKAVAVLVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPELSCYTFEHGKLDNVTRHVSC*
Ga0120163_10351872	3300012003	Permafrost	MNAIMSFRIGIPGYLKAVAALSALLLLAGCGGGSSASKTSDVEKAILVRSPDSSQVTCERHGSFQGKTLYRCQADVATSVKEMRPESSCYTFEHGRLDNVTRHVSC*
Ga0120161_10567442	3300012005	Permafrost	MNAIMSFRIGIPGYLKAVTAFGALLLLAGCGGGSSTAKTSDVEKAILVRSPDSSQAICERHGSYQGKTLFRCKADVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0120174_10141223	3300012008	Permafrost	LVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPELSCYTFEHGKLDNVTRHVSC*
Ga0120152_10024712	3300012011	Permafrost	MSFRIGIPGYLKAVAVLVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0120159_10074574	3300012014	Permafrost	MNAIMSFRIGIPGYLKAVAVLVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0137365_103720062	3300012201	Vadose Zone Soil	VIFRISAGGYRIAAAALGAVFLLAGCGGGASSSSTSDVEKAVRVRNPDSSQVRCEPHGSSGGKALYRCHIDVATNVREMRPESSCYTFERGRLEDVTRRVSC*
Ga0137374_100089972	3300012204	Vadose Zone Soil	LSALVVLAGCGGGSSTSSISDVEKAVRVRSPDSSSVRCERHGEYRGTALYRCRMDVPVSVREMRPESSCYTFEHGRLNDVTRHVSC*
Ga0137374_100141097	3300012204	Vadose Zone Soil	MNATVSFRIGIPGYLKAVAALSALLLLSGCGGSTASSTSDVEKAVGVRSPDSSDVRCERHGSFQGSALFRCRMDVPTSTREMRPESSCYTFEDGRLKNVTRHVSC*
Ga0137376_108045551	3300012208	Vadose Zone Soil	MNAIVSFRIGIPGYLKAVAVLGAVLLPAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVT
Ga0137376_111330821	3300012208	Vadose Zone Soil	MSFRIGIPGYLKAVAVLSALSLLGGCGGGSSASKTSDVEKAILVRSPDSSQVTCERHGSYQGKALYRCQADVATSVKEMRPESSCYTFEHSRLDNVTRHVSC*
Ga0137377_113204372	3300012211	Vadose Zone Soil	MSFRIGIPGYLKAVAVLSALLLLGGCGGGSSASKTSDVEKAILVRSPDSSQVTCERHGSYQGKALYRCQADVATSVKEMRPESSCYTF
Ga0137372_107276002	3300012350	Vadose Zone Soil	MDRIVIFRISAGGYRIAAAVLGVVFLLAGCGGGASSSSTSDVEKAVRVRNPDSSQVRCERHGTSGGKALYRCHIDVATNVREMRPESSCYTFEHGRLEDVTRHVSC*
Ga0137371_101922322	3300012356	Vadose Zone Soil	VIFRIRAPGYLKAAGLLSALLVLAGCGGGSSAPSSSDVEKAVRVRNPDSSRVSCERHGNYRGGAVFRCRMDVPVSVREMRPESSCYTLEHGRLENVTRQVSC*
Ga0157321_10249741	3300012487	Arabidopsis Rhizosphere	MNATVSFRIGFPGYLKAVTALCALFLLSGCGGSSASTTSDVEKAIRVRNPDSSQITCENHGQYRGAKVYRCKMDVATSVREMRPE
Ga0157343_10043802	3300012488	Arabidopsis Rhizosphere	FAGQLPLYRSGIAACAGAAASSPSETMNATVSFRIGFPGYLKAVTALCALFLLSGCGGSSASTTSDVEKAIRVRNPDSSQITCENHGQYRGAKVYRCKMDVATSVREMRPESSCYTLVDGRLDNVTRHISC*
Ga0157342_10021882	3300012507	Arabidopsis Rhizosphere	MNATVSFRIGFPGYLKAVTALCALFLLSGCGGSSASTTSDVEKAIRVRNPDSSQITCENHGQYRGAKVYRCKMDVATSVREMRPESSCYTLVDGRLDNVTRHVSC*
Ga0162653_1000236422	3300012937	Soil	MNATVSFRIGIPGYLTAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0162651_1000732882	3300012938	Soil	MNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGDYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC*
Ga0164300_101638971	3300012951	Soil	DVEKAILVRSPDSSQVTCMRHGSYEGKRLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0164303_104320102	3300012957	Soil	MNAIMSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0164302_106391022	3300012961	Soil	MSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0120179_10238723	3300013763	Permafrost	LVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPELSCYTFEHGKLDNVTRHVSC
Ga0120155_10859761	3300013768	Permafrost	PNEAMNAIMSFRIGIPGYLKAVAVLVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0120158_1000350015	3300013772	Permafrost	MNAIMSFRIGIPGYLKAVAALSALLLLAGCGGGSSASKTSDVEKAILVRSPDSSQVTCERHGSFQGKVLYRCQADVATSVKEMRPESSCYTFEHGRLDNVTRHVSC*
Ga0120149_12194332	3300014058	Permafrost	LVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0120171_10197661	3300014827	Permafrost	GIPGYLKAVAVLVALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPELSCYTFEHGKLDNVTRHVSC*
Ga0120104_10079472	3300014829	Permafrost	MSFRIGIPGYLKAVTAFGALLLLAGCGGGSSTAKTSDVEKAILVRSPDSSQAICERHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC*
Ga0173483_106277751	3300015077	Soil	KAVAALCAFFLLGGCGGSSASTTSDVEKAIRVRNPDSSQVTCEDHGRYRGAKLYRCSLDVATGVREMRPESSCYTLEDGRLENVTRHVSC*
Ga0132258_126417531	3300015371	Arabidopsis Rhizosphere	MNATVSFRIGFPGYLKAATALCALFLLNGCGGSSASTTSDVEKAIRVRNPDSSQISCEVHGNYRGAKLFRCKMDVATGVREMRPESSCYTLEDGRLANVTRHVSC*
Ga0184604_101458411	3300018000	Groundwater Sediment	MNAIMSFRIGIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0184605_104052192	3300018027	Groundwater Sediment	TMNAIISFRIGIPGYLKAVAALSALLLAGCGGGSGSSASKTSDVEKAVLVRSPDSSHVTCMRHGSYQGKALYRCKADVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0184605_104290702	3300018027	Groundwater Sediment	LAGCGGGSGSSASKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0184608_100877002	3300018028	Groundwater Sediment	LGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0184619_100992823	3300018061	Groundwater Sediment	GAAASSPSEPMIAIMSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0184617_10865331	3300018066	Groundwater Sediment	SPSETMNAIMSFRIGIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRTPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0184617_11710241	3300018066	Groundwater Sediment	VLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDN
Ga0184609_104041622	3300018076	Groundwater Sediment	MNAIVSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0184625_100130823	3300018081	Groundwater Sediment	MNAIVSFRIGIPGYLKAVAALGAFLLLGGCGGSSASNTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC
Ga0190269_111336582	3300018465	Soil	LGGLLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCEQHGEYQGATLYRCGMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC
Ga0193705_10337872	3300019869	Soil	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVKCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC
Ga0193705_10669482	3300019869	Soil	SETMKAIMSFRIGIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0193700_10227091	3300019873	Soil	MNAIMSFRIGIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0193715_10165251	3300019878	Soil	MSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGRLDNVTRHVSC
Ga0193721_10891312	3300020018	Soil	GIPACAGAAASSPSETMNAIMSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGRLENVTRHVSC
Ga0193745_10497032	3300020059	Soil	MSFRIGIPGYLKAVAALAALLVLAGCGGGSSASKTSDVEKAILVRSPDSSQVTCMKHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEQGKLDNVTRHVSC
Ga0222621_11266972	3300021510	Groundwater Sediment	LGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLD
Ga0222623_103845551	3300022694	Groundwater Sediment	AAASRASETMNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC
Ga0222622_100398955	3300022756	Groundwater Sediment	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHSDYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC
Ga0207686_109166312	3300025934	Miscanthus Rhizosphere	MPACAGAAASKPSETMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTSDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPDSSCYTLEDGRLENVTRHVSC
Ga0207709_101467511	3300025935	Miscanthus Rhizosphere	LKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQVTCMRHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC
Ga0207668_101539564	3300025972	Switchgrass Rhizosphere	MPACAGAAASKASDTMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTTDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC
Ga0207702_117828932	3300026078	Corn Rhizosphere	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQVTCMRHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC
Ga0207675_1000131944	3300026118	Switchgrass Rhizosphere	MPACAGAAASKPSETMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTSDVEKAILVRSPDSSQVTCERHGEYRGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC
Ga0307276_100210572	3300028705	Soil	MNAIMSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYHGKVLFRCQADVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307295_102283531	3300028708	Soil	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLDNVTRHVSC
Ga0307322_101673402	3300028710	Soil	LGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307293_101365881	3300028711	Soil	MNAIMSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307293_102594061	3300028711	Soil	ASKASETMNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASNTSDVEKAILVRSPDSSQVTCEQHGEYQGANLYRCRMDVATSVREMRPESSCYTFEDGRLNNVTRHVSC
Ga0307303_100219392	3300028713	Soil	VLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGRLDNVTRHVSC
Ga0307311_100034523	3300028716	Soil	VLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307311_101143132	3300028716	Soil	SETMNAIMSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRTPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307298_101352511	3300028717	Soil	LLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307307_102446992	3300028718	Soil	GGSSSAAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307301_101983442	3300028719	Soil	SSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307317_100579573	3300028720	Soil	GGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307317_102651031	3300028720	Soil	MKAIVSFRIGIPGYLKSVATLGAVLLLGGCGGSSAVKTSDVEKAILVRSPDSSQATCELHGHYQGKALYRCKSDVATSVREMRPESSCYTFEDDRLENVT
Ga0307319_102166851	3300028722	Soil	ALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGANLYRCRMDVATSVREMRPESSCYTFEDGRLNNVTRHVSC
Ga0307316_100577192	3300028755	Soil	MKAIVSFRIGIPGYLKSVATLGAVLLLGGCGGSSAVKTSDVEKAILVRSPDSSQATCELHGHYQGKALYRCKSDVATSVREMRPESSCYTFEDDRLENVTRHVSC
Ga0307280_100368853	3300028768	Soil	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307320_103190642	3300028771	Soil	NAIMSFRIGIPGYLKAVAVLGALLLLAGCGGDSSASKTSDVEKAILVRSPDSSQVTCMRHGSYQDKALFRCQADVATSVREMRPESSCYTYEHGRLDNVTRHVSC
Ga0307288_100562042	3300028778	Soil	LGALLLLAGCGGGSSAAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307306_102358472	3300028782	Soil	LGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLN
Ga0307282_104517332	3300028784	Soil	GIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307323_1000103114	3300028787	Soil	VLGALLLLAGCGGGSPSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307323_102584462	3300028787	Soil	LLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLNNVTRHVSC
Ga0307299_101029743	3300028793	Soil	YLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307299_102749962	3300028793	Soil	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEGGRLDNVTRHVSC
Ga0307305_101460522	3300028807	Soil	MSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307294_103814472	3300028810	Soil	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEGGRLDNV
Ga0307292_100166335	3300028811	Soil	MVLPGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307292_104364972	3300028811	Soil	MIAIMSFRIGIPGYLKAVAVLGALLVLAGCGGDSSAAKTSDVEKAILVRSPDSSQVTCMRHGNYKGKVLFRCQTDVATSVREMRPESSCYTFEHGRLDNVTRHVSC
Ga0307302_100233296	3300028814	Soil	SPSETMNAIMSFRIGIPGYLKAVAVLGALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307310_100092567	3300028824	Soil	VLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307314_100136825	3300028872	Soil	GGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307289_100440544	3300028875	Soil	MSFRIGIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307300_101626631	3300028880	Soil	LLGGCGGSSASKTSDVEKAILVRSPDSSQVTCERHGEYQGAKLYRCSMDVATSVREMRPESSCYTFEGGRLDNVTRHVSC
Ga0307300_102149462	3300028880	Soil	AIMSFRIGIPGYLKAVAVLGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307308_102484663	3300028884	Soil	AKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0307304_101009943	3300028885	Soil	SGIPACAGAAASSPSETMIAIMSFRIGIPGYLKAVAVLGALLVLAGCGGDSSAAKTSDVEKAILVRSPDSSQVTCMRHGNYKGKVLFRCQTDVATSVREMRPESSCYTFEHGRLDNVTRHVSC
Ga0308200_10634921	3300030905	Soil	MNAIVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRSPDSSQVTCEQHGEYQGAKLYRCRMDVATSVREMRPESSCYTFEDGRLNNVTRHVSC
Ga0308189_102166602	3300031058	Soil	VLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNV
Ga0308201_100414732	3300031091	Soil	LGALLLPAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0308204_101124341	3300031092	Soil	LGALLLLAGCGGDSSASKTSDVEKAILVRSPDSSQVTCMRHGSYLGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVS
Ga0308187_103475841	3300031114	Soil	LGALLLLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGRTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC
Ga0308175_1000443263	3300031938	Soil	MNATVSFLIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAIQVRSPDSSQVTCESHGEYQGAKLYRCKMDVATSVREMRPQSSCYTFEHGRLNNVTRHLSC
Ga0308176_102044552	3300031996	Soil	LLLGGCGGSSASKTSDVEKAIQVRSPDSSQVTCESHGEYQGAKLYRCKMDVATSVREMRPQSSCYTFEHGRLNNVTRHLSC
Ga0307472_1018413642	3300032205	Hardwood Forest Soil	MPACAGATASKASETMNATVSFRIGIPGYLKAVAALGAVLLLGGCGGSSASKTSDVEKAILVRTPDSSQVTCMRHGEYQGAKLYRCRMDVATSVREMRPESSCYTLEDGRLENVTRHVSC
Ga0247829_112134122	3300033550	Soil	MSFRIGIPGYLKAVAVLAALLVLAGCGGGSSSAKTSDVEKAILVRSPDSSQVTCMRHGSYQGKTLFRCQSDVATSVREMRPESSCYTFEHGKLDNVTRHVSC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences