Metagenome Family F052639

Overview

Basic Information

• Family ID: F052639
• Family Type: Metagenome
• Number of Sequences: 142
• Average Sequence Length: 51 residues
• Representative Sequence: MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
• Number of Associated Samples: 81
• Number of Associated Scaffolds: 142

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 54.93 %
• % of genes near scaffold ends (potentially truncated): 35.21 %
• % of genes from short scaffolds (< 2000 bps): 92.25 %
• Associated GOLD sequencing projects: 62
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (62.676 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (76.056 % of family members)
• Environment Ontology (ENVO): Unclassified (88.732 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (95.070 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 62.75%
  β-sheet: 0.00%
  Coil/Unstructured: 37.25%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF03592	Terminase_2	2.82
PF13730	HTH_36	0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	2.82

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	37.32 %
Unclassified	root	N/A	62.68 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	23.24 %
Unclassified	root	N/A	62.68 %
Viruses	superkingdom	All Organisms → Viruses	14.08 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.24 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	8.45 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Unclassified	root	N/A	62.68 %

Level 4

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	13.38 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	8.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.63 %
Unclassified	root	N/A	62.68 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	13.38 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Unclassified	root	N/A	62.68 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.70 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	8.45 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.63 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	13.38 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8.45 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Unclassified	root	N/A	62.68 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.70 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %

Level 7

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.70 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.75 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	13.38 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Unclassified	root	N/A	62.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.63 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %

Level 8

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.63 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.70 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	0.70 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	13.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Unclassified	root	N/A	62.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.04 %
uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	0.70 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.63 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.70 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	13.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Unclassified	root	N/A	62.68 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	0.70 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.04 %
uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	0.70 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %

Level 10

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.63 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.70 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Unclassified	root	N/A	62.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.04 %
uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	0.70 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %
Winogradskyella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella	13.38 %

Level 11

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.63 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.70 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Unclassified	root	N/A	62.68 %
unclassified Winogradskyella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella	13.38 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.04 %
uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	0.70 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %

Level 12

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.63 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.70 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Unclassified	root	N/A	62.68 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.04 %
uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD10-C281	0.70 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.70 %
Winogradskyella sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	13.38 %

Associated Scaffolds

Scaffold	Taxonomy	Length
(restricted) 3300027881|Ga0255055_10331638	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	821
3300002231|KVRMV2_100409513	All Organisms → cellular organisms → Bacteria	829
3300002483|JGI25132J35274_1001891	Not Available	5552
3300002484|JGI25129J35166_1073099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626
3300002514|JGI25133J35611_10028371	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2117
3300002514|JGI25133J35611_10041321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	1629
3300002514|JGI25133J35611_10136440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685
3300002514|JGI25133J35611_10191034	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	541
3300002518|JGI25134J35505_10077016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767
3300006027|Ga0075462_10051490	Not Available	1308

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.82%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.41%
Inlet	Environmental → Aquatic → Marine → Inlet	0.70%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.11%
Oceanic	Environmental → Aquatic → Marine → Oceanic	83.80%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.70%
Strait	Environmental → Aquatic → Marine → Strait	3.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.52%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.41%

Subtype

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.70%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.70%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.41%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.11%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.70%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	81.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.52%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.52%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.82%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.70%

Habitat

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.82%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.11%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.41%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	76.06%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.52%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.70%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	1.41%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.11%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.52%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.41%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.70%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.70%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.70%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.41%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
KVRMV2_1004095132	3300002231	Marine Sediment	MQKKKVKFKPYKPTATIEDYQEAIQILMVDYADVWEKTKTFKEVDKKLKKLGI*K*
JGI25132J35274_10018914	3300002483	Marine	MQKKKKHRYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKRLGI*
JGI25129J35166_10730991	3300002484	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYDKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*
JGI25133J35611_100283711	3300002514	Marine	QKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDEKLKKLGI*
JGI25133J35611_100413211	3300002514	Marine	KKIEPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLNKLGI*
JGI25133J35611_101364403	3300002514	Marine	KYMQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*
JGI25133J35611_101910341	3300002514	Marine	NDNRIIKEKYMQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
JGI25134J35505_100770162	3300002518	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*
Ga0075462_100514902	3300006027	Aqueous	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0075466_11388362	3300006029	Aqueous	MQRKKKPKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0068502_14450962	3300006336	Marine	MTKKKKQIYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098038_10527253	3300006735	Marine	MQRNKKTKPKPTIEDYKEAIQILIVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0098038_12245691	3300006735	Marine	KPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0098037_10376823	3300006737	Marine	MQRNKKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0098037_12276913	3300006737	Marine	MQRKKKHIYKPTATLKDYKEAIQILMVDYADVWEKTKTYKEV
Ga0098035_10572762	3300006738	Marine	MKKKKKQKLYEYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI*
Ga0098035_12577071	3300006738	Marine	MGYYKIMKKKKKHKYKPTATLKGYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098035_13218491	3300006738	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098042_10205723	3300006749	Marine	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTKTY
Ga0098042_10922131	3300006749	Marine	MQKKKKHIYKPTATLKDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI*
Ga0098042_11313872	3300006749	Marine	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI*
Ga0098058_10933902	3300006750	Marine	MGYYKIMKKKKKQKLYQYKPTATIEDYQEAIQILMVDYGDVWEKNGTFKEVDKKLKKLGI
Ga0098058_11122772	3300006750	Marine	MQKKKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEV
Ga0098058_12046761	3300006750	Marine	KKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*
Ga0098040_10306142	3300006751	Marine	MQKKKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098040_10719152	3300006751	Marine	MKKKKKTKTKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098040_10870863	3300006751	Marine	MKKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*
Ga0098040_11728211	3300006751	Marine	MKKKKKKKIEPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLNKLGI*
Ga0098040_12359142	3300006751	Marine	MKKKKKVKFKPYEPTATLKDYKEAIQILMIDYADVWEKTKTFKEVDKKLRKLGI*
Ga0098048_10496852	3300006752	Marine	MQKKKKHIYKPTATLKDYKEAIQILMVDYADVREKTKTYKEVDKKLRKLGI*
Ga0098048_11570032	3300006752	Marine	MQKKKKHKYKPTATLKGYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098048_11817581	3300006752	Marine	DNRIIKEKYMQKKKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0098044_11791942	3300006754	Marine	MKKKKKHKYKPTATLKGYKEAIQILMVDYADVWEKTGTFKEVDKKLKQLGI*
Ga0098044_11912653	3300006754	Marine	MPRKKQTKKQHKQPTLKDYQEAIQILMVDYADVWEKTRTFKEVDKKLRKLGI*
Ga0098044_12776451	3300006754	Marine	MSALRKKKKKIEPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLNKLGI*
Ga0098044_13024711	3300006754	Marine	MQKNKKVKFKPYKPTATLEDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098044_14101011	3300006754	Marine	MQKKKLKFKPYKPIARLKDYQEAIQILMVDYADVWEETGTFKEVDKKLKKLGI*
Ga0098054_11395421	3300006789	Marine	MKKKKKHKYKPTATLKGYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098054_11629243	3300006789	Marine	MKKKKKVKFKPYEPTATLKDYKEAIQVLMVDYADVWEKTKTFKEVDKKLRKLGI*
Ga0098054_12063823	3300006789	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*K*QQLKK
Ga0098054_12974211	3300006789	Marine	PRPALILTQLNDNRIIKEKYMPKKKKVKFKPYKPTATLEDYKEASQILMVDYADVWEKTGTFKEVDKKLRKLGI*
Ga0098054_13254402	3300006789	Marine	MKKKKKHKYKPTATLKGYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGK*
Ga0098054_13628922	3300006789	Marine	MQKNKKPKPKPTIEDYKEAIQILMVDYADVWEKTKTFKEVDKKLKRLGI*
Ga0098055_10091117	3300006793	Marine	MKKKKKQKLYQYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI*
Ga0098055_12188582	3300006793	Marine	EKYMQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*
Ga0098055_12610492	3300006793	Marine	MKKKKKSKPTIEDYKEAIQILMVDYADVWEKTKTFKEVDKKLKKLNI*
Ga0098055_13017571	3300006793	Marine	MQKNKKVKFKPYKPTATLEDYKEAIQILMVGYADVWEKTGTFKEVDKKLKKLGI*
Ga0098060_11574671	3300006921	Marine	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*KQMK
Ga0098053_10359821	3300006923	Marine	KTKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098050_10744492	3300006925	Marine	MGYYKIMKKKKKQKLYEYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI
Ga0098050_11161671	3300006925	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDKKLKQLGI*
Ga0098050_11702162	3300006925	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDEKLKKLGI*
Ga0098057_11213202	3300006926	Marine	MQKKKKHKYRPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDKKLKKLGI*
Ga0098041_12213442	3300006928	Marine	EKYMQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098041_13106761	3300006928	Marine	KKKIEPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLNKLGI*
Ga0098036_10303463	3300006929	Marine	MKKKKKTKTKPTIEDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098036_10918143	3300006929	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEV
Ga0098036_12098141	3300006929	Marine	KKQKLYEYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI*
Ga0098052_10109373	3300008050	Marine	MGYYKIMKKKKKQKLYQYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI
Ga0098052_10984632	3300008050	Marine	MGIYKKGYMQKKKLKFKPYKPIARLKDYQEAIQILMVDYADVWEETGTFKEVDKKLKKLGI*
Ga0098052_13076201	3300008050	Marine	MPKKKKVKFKPYKPIATLEDYKEAIQILMVDYADVWEKTGTFKEVDKKLRKLGI*
Ga0114898_10824433	3300008216	Deep Ocean	HLYKPTATLENYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0114898_12272882	3300008216	Deep Ocean	MQRKKKTKPTIEDYKEAIQILMVDYADVWEKTNTFKEVNKKLRKLGI*
Ga0114910_11412054	3300008220	Deep Ocean	VKKTKQKPTPTIKDYKEAIQILMVDYADVWEKTKTFKEVDKKLKKL
Ga0114932_106490762	3300009481	Deep Subsurface	LTAQGPSDSSRIIKEKYMPKKKKVKFKPYKPTATLEDYKEAIQILMVDYADVWENTGTFKEVDKKLKKLGI*
Ga0115011_106368602	3300009593	Marine	MKTKKTKVKFNPYRPIGTLEDYKEAIQILLVDYADVWNEKIYKEVDKKLRKLGI*
Ga0115011_109559012	3300009593	Marine	MQKNKKPKPKPTIEDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0105236_10072302	3300009619	Marine Oceanic	MPRKKQTKKQHKQPTLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLRKLGI*
Ga0114933_106771702	3300009703	Deep Subsurface	MQRKKKHVYKPTATLKDYKEAIQILMVDYADVWEKTKTFK
Ga0115012_102937632	3300009790	Marine	MPKKKKVKFKPYKPTARLKDYQEAIQILMVDYADVWENTGTFKEVDKKLRKLGI*
Ga0115012_118380321	3300009790	Marine	MQRKKKHIYKPTPTIEDYKEAIQILMVDYADVWEKTKTFKEVDKKLKRLGI*
Ga0115012_120622632	3300009790	Marine	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTKTFKEVDKKLRKLGI*
Ga0098043_10770741	3300010148	Marine	KLKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0098043_11377941	3300010148	Marine	MQRKKKTKLKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDK
Ga0098049_12369981	3300010149	Marine	PKPTIEDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI*
Ga0098056_10495722	3300010150	Marine	MMKKKKKQKLYQYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI*
Ga0098056_11136123	3300010150	Marine	LTQLNDNRIIKEKYMPKKKKVKFKPYKPTATLEDYKEAIQILMVDYADVWEKTGTFKEVDKKL
Ga0098056_11743172	3300010150	Marine	MKKKKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI*
Ga0098056_12110072	3300010150	Marine	MKTKKTKVKFNPYRPIGTLEDYKEAIQILLVDYADVWSEKIYKEVDKKLRKLGI*
Ga0098061_11134661	3300010151	Marine	IIKEKYMQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI*
Ga0098059_12662912	3300010153	Marine	MSALRKKKKKKKIEPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLNKLGI*
Ga0098047_102599181	3300010155	Marine	QAIDKRQASSYNRIIKEKKAMQKKKVKFNPYTPEARLKDYQEAIQILMVDYADVWEETGTFKEVDEKLKKLGI*
Ga0160423_106248612	3300012920	Surface Seawater	MQRKKKTKPKPTPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0163109_109633261	3300012936	Surface Seawater	KTKPKPTIEDYNEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI*
Ga0163179_102961764	3300012953	Seawater	VKKTKQKPTPTIKDYKEAIQILMVDYADVWEKTKTFKEVNKKLRKLGI*
Ga0181372_10357593	3300017705	Marine	MQKKKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0181369_10931931	3300017708	Marine	RIMQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI
Ga0181387_10538341	3300017709	Seawater	MQRKKKHIYKPTATLKDYKEAIQILMVDYADVWEKTK
Ga0181373_10733561	3300017721	Marine	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTKTYKEVNKKLRKLGI
Ga0181382_11463492	3300017756	Seawater	MQRKKKHIYKPTIEDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI
Ga0187221_11816701	3300017769	Seawater	MQRKKKTKPTIEDYKEAIQILMVDYADVWEKTKTYKEVDK
Ga0181558_106755052	3300018417	Salt Marsh	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTKTFKEVDKKLKKLGI
Ga0181563_101718322	3300018420	Salt Marsh	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLKKLGI
Ga0181556_12293802	3300020176	Salt Marsh	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI
Ga0211658_11042382	3300020274	Marine	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI
Ga0211512_100219975	3300020419	Marine	VKKTKQKPTPTIKDYKEAIQILMVDYADVWEKTKTFKEVNKKLRKLGI
Ga0211585_102489463	3300020477	Marine	MKKKKKPKPTPTIEDYKEAIQILMVDYADVWEKTGTFKEVDKKLRKLGI
Ga0226832_101357752	3300021791	Hydrothermal Vent Fluids	MPKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFK
Ga0224906_10614082	3300022074	Seawater	MQRKKKTKPTIEDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI
Ga0224906_11867492	3300022074	Seawater	MQRKKKHIYKPTATLKDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI
Ga0208012_10022637	3300025066	Marine	MKKKKKQKLYEYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI
Ga0208012_10123591	3300025066	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0208012_10203001	3300025066	Marine	MKKKKKSKPTIEDYKEAIQILMVDYADVWEKTKTFKEVDKKLKKLNI
Ga0208667_10063983	3300025070	Marine	MQRNKKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI
Ga0208667_10687641	3300025070	Marine	MQRKKKHIYKPTATLKDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGIXK
Ga0208668_10652841	3300025078	Marine	MQKKKKHKYRPTATLKDYKEAIQILMVDYADVWEKTDTFKEVD
Ga0208298_10395923	3300025084	Marine	QKKKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0208792_10449075	3300025085	Marine	KKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0208792_10551032	3300025085	Marine	MKTKKTKVKFNPYRPIGTLEDYKEAIQILLVDYADVWSEKIYKEVDKKLRKLGI
Ga0208157_11109281	3300025086	Marine	MQKKKKHIYKPTATLKDYKEAIQILMVDYADVWEKTKTYKEVDKKLRKLGI
Ga0208011_10443814	3300025096	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEK
Ga0208011_10963031	3300025096	Marine	MKKKKKVKFKPYEPTATLKDYKEAIQILMIDYADVWEKTKTFKEVDKKLRKLGI
Ga0208011_11041231	3300025096	Marine	MKKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI
Ga0208666_10603433	3300025102	Marine	TKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI
Ga0208013_10609322	3300025103	Marine	MKKKKKVKFKPYEPTATLKDYKEAIQVLMVDYADVWEKTKTFKEVDKKLRKLGI
Ga0208013_11284171	3300025103	Marine	MSALRKKKKKIEPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLNKLGI
Ga0208013_11748031	3300025103	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDEKLKKLGI
Ga0208793_11008643	3300025108	Marine	MQKKKLKFKPYKPIARLKDYQEAIQILMVDYADVWEETGTFKEVD
Ga0208158_11074881	3300025110	Marine	MKKKKKTKTKPTIEDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0208158_11424881	3300025110	Marine	YMQKKKKHKYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0209349_10941823	3300025112	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVD
Ga0208790_11218141	3300025118	Marine	MQKNKKVKFKPYKPTATLEDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0208919_10774331	3300025128	Marine	KKQKLYEYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI
Ga0208919_11771191	3300025128	Marine	MQRKKKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDK
Ga0208299_10318732	3300025133	Marine	MGYYKIMKKKKKHKYKPTATLKGYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0208299_10321882	3300025133	Marine	MQKKKKHKYKPTATLKDYKEAIQILMVDYADVWEKTDTFKEVDKKLKQLGI
Ga0208299_11465082	3300025133	Marine	MPKKKKVKFKPYKPIATLEDYKEAIQILMVDYADVWEKTGTFKEVDKKLRKLGI
Ga0209756_10877852	3300025141	Marine	MMKKKKKQKLYEYKPTATIEDYQEAIQILMVDYGDVWEKTGTFKEVDKKLKKLGI
Ga0209756_11149963	3300025141	Marine	MQKNKVKFKPYKPTATLEDYKEAIQILMVDYADVWEKTKTFKEVDKKLKKLGI
Ga0209756_11830702	3300025141	Marine	NKMQKKKKHRYKPTATLKDYKEAIQILMVDYADVWEKTNTFKEVDKKLKKLGI
Ga0209756_12158421	3300025141	Marine	MQKNKKPKPKPTIEDYKEAIQILMVDYADVWEKTKTFKEVDKKLKKLNI
Ga0209756_12550102	3300025141	Marine	KPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI
Ga0208148_11268682	3300025508	Aqueous	MQRKKKPKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI
Ga0208425_10052411	3300025803	Aqueous	QRKKKTKTKPKPTIEDYKEAIQILMVDYADVWEKTNTFKEVDKKLRKLGI
Ga0208560_10122213	3300026115	Marine Oceanic	MKKKKKHKYKPTATLEDYKEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
(restricted) Ga0255055_103316381	3300027881	Seawater	MTKKKKQIYKPTATLKDYREAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0209404_108292151	3300027906	Marine	MKTKKTKVKFNPYRPIGTLEDYKEAIQILLVDYADVWNEKIYKEVDKKLRKLGI
Ga0256382_11484741	3300028022	Seawater	MQKKKVKFKPYKPTATIEDYQEAIQILMVDYADVWEKTKTFKEVDKKLKKLGI
Ga0185543_10669272	3300029318	Marine	MQRKKKTKPTIKDYKEAIQILMVDYADVWEKTKTFKEVDKKLKKLGI
Ga0183755_10320763	3300029448	Marine	MQRKKKTKPTIEDYKEAIQILMVDYADVWEKTNTFKEVNKKLRKLGI
Ga0310344_101427065	3300032006	Seawater	MRKKKTKKIYKPTATLKDYQEAIQILMVDYADVWEKTGTFKEVDKKLKKLGI
Ga0310342_1022107962	3300032820	Seawater	MTKKKKQIYKPTATLKDYKEAIQILMVDYADVWEKTRTFKEVDKKLKKLGI