NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F052577

Metagenome / Metatranscriptome Family F052577

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F052577
Family Type Metagenome / Metatranscriptome
Number of Sequences 142
Average Sequence Length 67 residues
Representative Sequence MTILRRFRAWWNKDALTRAEEETRMTEAERDVAKEDYEARKDDVAVRSDVLAGGAADYERDSEPPRP
Number of Associated Samples 114
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 41.48 %
% of genes near scaffold ends (potentially truncated) 19.72 %
% of genes from short scaffolds (< 2000 bps) 79.58 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (61.972 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.085 % of family members)
Environment Ontology (ENVO) Unclassified
(36.620 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.
1Iowa-Corn-GraphCirc_03781850
24MG_03821850
3INPhiseqgaiiFebDRAFT_1013307982
4JGI1027J12803_1077789641
5JGI10216J12902_1039190973
6JGI10216J12902_1070531452
7JGI10216J12902_1159794872
8A10PFW1_103823683
9JGI25404J52841_100759813
10Ga0062593_1000759923
11Ga0062590_1008105212
12Ga0063356_1009934092
13Ga0062595_1002945362
14Ga0066823_101509362
15Ga0066809_101419742
16Ga0065705_107687211
17Ga0070677_106030872
18Ga0070682_1005059472
19Ga0070668_1017647012
20Ga0070668_1018489872
21Ga0070688_1003314401
22Ga0070714_1000128332
23Ga0070713_1000705772
24Ga0070705_1005776671
25Ga0070705_1008282262
26Ga0070708_1010262242
27Ga0066689_105368531
28Ga0066698_103166241
29Ga0066654_108320881
30Ga0068864_1021155282
31Ga0066905_1000454053
32Ga0068866_109045252
33Ga0066903_1032152373
34Ga0075365_112675251
35Ga0074056_110296231
36Ga0074056_114777301
37Ga0075421_1008179722
38Ga0075433_100447534
39Ga0075433_112579661
40Ga0075434_1009240772
41Ga0075434_1014599692
42Ga0068865_1001312243
43Ga0068865_1013164191
44Ga0075424_1001475482
45Ga0075424_1011459991
46Ga0075418_111977191
47Ga0066709_1021485112
48Ga0114129_103797663
49Ga0114129_108503603
50Ga0114129_117143581
51Ga0105243_104250321
52Ga0105242_110576292
53Ga0105249_102647853
54Ga0126313_106836392
55Ga0126380_101118783
56Ga0126382_103941162
57Ga0134071_104979761
58Ga0134062_103024732
59Ga0126376_113058612
60Ga0126377_101210182
61Ga0134125_127571151
62Ga0134128_112072532
63Ga0105239_106273922
64Ga0134127_126975372
65Ga0105246_100679332
66Ga0120159_10321872
67Ga0120192_100612701
68Ga0137364_112537351
69Ga0137374_1000173212
70Ga0137374_100205503
71Ga0137374_100384936
72Ga0137374_103121321
73Ga0137374_105145152
74Ga0137367_100213042
75Ga0137367_102885821
76Ga0137369_100080542
77Ga0137369_100733672
78Ga0137369_103756483
79Ga0137368_100163462
80Ga0137375_105950732
81Ga0137375_114167682
82Ga0134045_11600361
83Ga0157350_10494121
84Ga0157327_10022572
85Ga0137373_103664694
86Ga0137358_107578931
87Ga0164300_108272762
88Ga0164299_103050973
89Ga0164299_107453532
90Ga0164302_112908341
91Ga0164305_115099702
92Ga0164305_120371202
93Ga0120150_11040902
94Ga0157378_128202831
95Ga0157375_109455441
96Ga0120111_10988582
97Ga0120155_11614963
98Ga0157380_102079353
99Ga0120171_10814671
100Ga0120193_100767472
101Ga0120193_100781842
102Ga0157379_105712641
103Ga0157376_127973511
104Ga0173483_105935661
105Ga0132258_126803772
106Ga0132256_10000344212
107Ga0132256_1033318011
108Ga0132257_1000490665
109Ga0132257_1016696942
110Ga0184605_100059563
111Ga0184623_100984052
112Ga0184623_101424001
113Ga0184619_100760582
114Ga0184618_100002956
115Ga0184632_103811831
116Ga0066669_121261072
117Ga0066669_123678032
118Ga0184643_10438992
119Ga0193739_10582202
120Ga0193721_11075111
121Ga0193737_10333441
122Ga0207642_105165122
123Ga0207688_105512232
124Ga0207643_101434372
125Ga0207646_114351582
126Ga0207700_1000002485
127Ga0207670_100381873
128Ga0207704_104796632
129Ga0207704_118985461
130Ga0207661_114835701
131Ga0307293_100382492
132Ga0307311_100800592
133Ga0307318_101428721
134Ga0307320_101915662
135Ga0307287_103815991
136Ga0307305_105106022
137Ga0307312_101416772
138Ga0307312_110305112
139Ga0307278_100035497
140Ga0247826_106378862
141Ga0310812_103402151
142Ga0247830_109452132
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.74%    β-sheet: 0.00%    Coil/Unstructured: 45.26%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035404550556065MTILRRFRAWWNKDALTRAEEETRMTEAERDVAKEDYEARKDDVAVRSDVLAGGAADYERDSEPPRPSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
62.0%38.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Terrestrial
Unplanted Soil
Switchgrass Rhizosphere
Soil
Permafrost
Soil
Grasslands Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Arabidopsis Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Populus Endosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Switchgrass, Maize And Mischanthus Litter
4.2%14.1%2.8%11.3%2.8%4.2%6.3%4.2%4.9%7.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_037818502140918013SoilMNLVQRLRAWWNKDAVELAEEETRMTAAERDIAQEDFEGRKDDVATGSGFLAGGAADYERDSERP
4MG_038218502170459019Switchgrass, Maize And Mischanthus LitterRQAGGMSWLDRLRAWWNKDARDVAEEEGRMTQAERDVTEEDYEGRKDDVATRSDYPYADGAVADFERDSEPPPPDDKPQ
INPhiseqgaiiFebDRAFT_10133079823300000364SoilMPVSVFRKFRAWWSKDDLEVANEEARMKPAERDVAEEDYEGRKDDIAVRSGYLQGGQADYERDSEPPR*
JGI1027J12803_10777896413300000955SoilWWSKDDLEVANEEARMKPAERDVAEEDYEGRKDDIAVRSGYLQGGQADYERDSEPPR*
JGI10216J12902_10391909733300000956SoilMALIRRIRGWWNKDAVALASEETRMTEAERDIAEEDYEARKDDVAARSGLLAGGAADYDRDSEPPRP*
JGI10216J12902_10705314523300000956SoilMSVFSKLRAWWSKDALETADEETRMTDAERDLAERDYEAMKDDTAVQSGRFMGGVADYERDSEPPR*
JGI10216J12902_11597948723300000956SoilMAILRRFRAWWNKDAFERAEEETGMSEHERDLAEADYEARKDDVAVRSGYLAGGAADYEGDSGPPRP*
A10PFW1_1038236833300001538PermafrostMAGFIQRFRAWWSTDKLERASEETRMTQAERDLAEEDYEGRKDDVLVKGEIFAGGAADYERDSEPPRDPAP*
JGI25404J52841_1007598133300003659Tabebuia Heterophylla RhizosphereMSFASKIRSWWSKDKLELADEETHMTESERDVAEEDYEARKDDVAVRSGRFMGGVADYERDSEPPRY*
Ga0062593_10007599233300004114SoilMSFASKIRGWWTKDRLELADEETHMTEAERDVADEDYEARKDDVAVRSGRFMGGVADYERDSEPPR*
Ga0062590_10081052123300004157SoilMPVSVFRKFRDWWSKDDLEVANEEARMKPAERDVAEEDYEGRKDDIAVRSGYLQGGQADYERDSEPPR*
Ga0063356_10099340923300004463Arabidopsis Thaliana RhizosphereMNLVQRLRAWWNKDAVELAEEETRMTPAERDIAQEDFEGRKDDVATGSGFLAGGAADYERDSERP*
Ga0062595_10029453623300004479SoilMALLARFRAWWNKDAVELAEEETRMTQAERDFAEQDYLTRKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0066823_1015093623300005163SoilMAFLARLRSWWNKDAVELAEEETRMTQAERDSVEQDFQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0066809_1014197423300005168SoilMSFVSKVRAWWTKDRLELSDEETHMTEGERDIADEDYEARKDDVAVRSGRFMGGVADYERDSEPPR*
Ga0065705_1076872113300005294Switchgrass RhizosphereSMSLLRRIRTWWSKDAAETAELETGMTQAERDVAEEDYEARKDDVSARSGLLGGGAADYERDSEPPRS*
Ga0070677_1060308723300005333Miscanthus RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQVERDSAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0070682_10050594723300005337Corn RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQAERDFAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0070668_10176470123300005347Switchgrass RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGADYERDSEPPGP*
Ga0070668_10184898723300005347Switchgrass RhizosphereSWWNKDAVELAEEETRMTQVERDSAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0070688_10033144013300005365Switchgrass RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQAERDSVEQDFQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0070714_10001283323300005435Agricultural SoilMAVALLRRLRDWWYKDKLERAQEETRMTPAERDTAEEDYEARKDDVTAQEYLAGGVADYERDSEPPPNH*
Ga0070713_10007057723300005436Corn, Switchgrass And Miscanthus RhizosphereMAVALLRRLRDWWYKDKLERAQEETRMTPAERDTAEEDYEARKDDVTAQEYLAGGVADYERNSEPPPNH*
Ga0070705_10057766713300005440Corn, Switchgrass And Miscanthus RhizosphereMALLGRLRSWWNKDAVELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGADYERDSEPPGP*
Ga0070705_10082822623300005440Corn, Switchgrass And Miscanthus RhizosphereVVAVLRRLLDWWKKDDLERAQEETRMTAAERDAAEEDYEARKDDVASRSYLAGGVADYERDSESPPDH*
Ga0070708_10102622423300005445Corn, Switchgrass And Miscanthus RhizosphereMASVLQRLRAWWNKDALEKAEKETRMTAAERDLAEEDYEGRKDDQYVSGDRLAGGTADYERDSEPPRDETP*
Ga0066689_1053685313300005447SoilMAGFLNRVRAWWNKDALEKAEKETRMTAAERDVAEEDYEGRKDDDYVSRDRLAGGTADYERDSEPPPDPTP*
Ga0066698_1031662413300005558SoilMSFFRRLRAWWHKDELERAEEETRMTAGERAAAEEDFEARKDDTRARSSYLAGGVTDYERDSEP
Ga0066654_1083208813300005587SoilVAGLFRRLRAWWNKDSLVKAEEETGMTQAERDLADEDYEGRKDDRHVSGERLAGGVADYERDSEPPPDPAP*
Ga0068864_10211552823300005618Switchgrass RhizosphereMAFLARFRAWWNKDAVELAEEETRMTQAERDFAEQDYLTRKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0066905_10004540533300005713Tropical Forest SoilMSVFDKIRAWWSKDALETADEETRMTASERDLAERDYEAMKDDTAVQSGRFMGGVADYERDSEPPR*
Ga0068866_1090452523300005718Miscanthus RhizosphereGGAIGSGGMAFLARFRSWWNKDAVELAEEETRMTQAERDSVEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0066903_10321523733300005764Tropical Forest SoilMSFFDRITAWWSKDKLELADEETHMSESERDVADEDYEARKDDVAVQSGRFMGGVADYERDSEPPRY*
Ga0075365_1126752513300006038Populus EndosphereLQRIRGWWNKDAVTRAEEETRMTQAERDIAEEDYEARKDDVAARSGLLGGGAADYERDEEPPRP*
Ga0074056_1102962313300006574SoilMSFVSKVRAWWTKDRLELTDEETHMTEGERDVADEDYEARKDDVAVRSGRLMGGVADYERDSEPPRY*
Ga0074056_1147773013300006574SoilMAFLGRLRSWWNKDAVELAEEETRMTQAERDSAEQDYQGRKDDSALLQRPLGGDTDYERDSEPPRP*
Ga0075421_10081797223300006845Populus RhizosphereMSWLDRLRAWWNKDARDVAEEEGRMTQAERDVAEEDYEGRKDDVATRSDYPYADGAVADFERDSEPPPPDDKPQ*
Ga0075433_1004475343300006852Populus RhizosphereMSLLQRLRAWWNKDAVELAKEETRMTEAERDAAKEDYEARKDDVAASSGYFAGGVADYESDSEPPRP*
Ga0075433_1125796613300006852Populus RhizosphereLRRLLDWWKKDDLERAQEETRMTPAERDAAEEDYEARKDDVASRSYLAGGVADYERDSEPPPDH*
Ga0075434_10092407723300006871Populus RhizosphereMALLRRLRAWWDKDALARAEEETRGTAGERDVAEEDYEARKDDVSTGTSYLGGGAADYERDSEPPRP*
Ga0075434_10145996923300006871Populus RhizosphereMVVALLRRLLDWWKKDDLERAQEETRMTPAERDAAEEDYEARKDDVASRSYLAGGVADYERDSEPPPDH*
Ga0068865_10013122433300006881Miscanthus RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQAERDFAEQDYLTRKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0068865_10131641913300006881Miscanthus RhizosphereMAFLGRLRSWWNKDAIELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGADYERDSEPPGP*
Ga0075424_10014754823300006904Populus RhizosphereMSLLQRLRAWWNKDAVELAKEETRMTEAERDAAKEDYEARKDDVAASSGYFAGGVADYESDSETPRP*
Ga0075424_10114599913300006904Populus RhizosphereVVAVLRRLLDWWKKDDLERAQEETRMTPAERDAAEEDYEARKDDVASRSYLAGGVADYERDSEPPPDH*
Ga0075418_1119771913300009100Populus RhizosphereMSLVRRIRAWWNKDALELAEEETRMTESERDIAEEDYEGRKDDMSLRSGRLLGGAGDYERDSEPPRR*
Ga0066709_10214851123300009137Grasslands SoilVAGLLQRLRAWWNKDALVKGEEETGMTQAERDLAEEDYEGRKDDRYVSGERLAGGVADYERDSEPPPDPAP*
Ga0114129_1037976633300009147Populus RhizosphereMSWLDRLRAWWNKDARDVAEEEGRMTQAERDVAEEDYEGRKDDVATRSDYPYADGAVADFERVSEPPPPDDKPQ*
Ga0114129_1085036033300009147Populus RhizosphereMALLQRIRGWWNKDAVTRAEEETRMTQAERDIAEEDYEARKDDVAARSGLLGGGAADYERDEEPPRP*
Ga0114129_1171435813300009147Populus RhizosphereMNLVRRIRAWWNKDALELAEEETRMTESERDIAEEDYEGRKDDMSLRSGRLLGGAGDYERDSEPPRR*
Ga0105243_1042503213300009148Miscanthus RhizosphereMAFLGRLRSWWNKDAIELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGDAEYERDSEPPGP*
Ga0105242_1105762923300009176Miscanthus RhizosphereMALLGRLRSWWNKDAVELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGAEYERDSEPPEP*
Ga0105249_1026478533300009553Switchgrass RhizosphereMALLARFRAWWNKDAVELAEEETRMTQAERDFAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0126313_1068363923300009840Serpentine SoilMALLRRLRAWWNKDALERADEETHMTEAERDVAEEDFEGQKDDVAARSDILAGGVTDYEGDSEPPRR*
Ga0126380_1011187833300010043Tropical Forest SoilDKLELADEETHMNESERDVAEEDYEARKDDVAVQSGRFMGGVADYERDSEPPRY*
Ga0126382_1039411623300010047Tropical Forest SoilMSFFDRITAWWSKDKLELADEETHMSESERDVAAEDYEARKDDVAVQSGRFMGGVADYERDSEPPRY*
Ga0134071_1049797613300010336Grasslands SoilMALLQRLRAWWSKDAVAQAAEEARMTESERDVAEEDFEARKDDVATQSGFFAGGAADYERDSEPPRP*
Ga0134062_1030247323300010337Grasslands SoilMSFFRRLRAWWHKDELERAEEETRMTAGERAAAEEDFEARKDDTRARSSYLAGGVTDYERDSEPTDR*
Ga0126376_1130586123300010359Tropical Forest SoilVSLFRKLSAWWNRDAVERADEETRMTPQERDVAEEDFEARKDDVATGSGFLAGGVADYERDSEPPQHP*
Ga0126377_1012101823300010362Tropical Forest SoilVSLFRKLTGWWSRDAVERAGEETRMTPQERDVAEEDFEARKDDIATGSGFLAGGVADYERDSEPPQNP*
Ga0134125_1275711513300010371Terrestrial SoilGVMAFLGRLRSWWNKDAIELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGADYERDSEPPGP*
Ga0134128_1120725323300010373Terrestrial SoilMAFLGRLRSWWNKDAVELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGADYERDSEPPGP*
Ga0105239_1062739223300010375Corn RhizosphereMAFLARFRAWWNKDAVELAEEETRMTQAERDFAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0134127_1269753723300010399Terrestrial SoilSKDAVELAEEETRMTQVERDSAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0105246_1006793323300011119Miscanthus RhizosphereMAFLGRLRSWWNKDAVELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGAEYERDSEPPEP*
Ga0120159_103218723300012014PermafrostMARLRQRLRAWWNKDALVTAEEETRMTQAERDVAEEDYEARKDDVSVSERLAGGVADYERDSEPPPDPTP*
Ga0120192_1006127013300012021TerrestrialMALLQRLRAWWNKDKLERADEETRMTTEAERDMAEEAYEGHKGDVAPRGDLLAGGAADYERDSEPPQR*
Ga0137364_1125373513300012198Vadose Zone SoilMSAFRRLKAWWSKDDLEVAEEVTRMTAAERDVAEEDYEARKDDTAVQSGRFLGGRADYERDSEPPR*
Ga0137374_10001732123300012204Vadose Zone SoilMAGLFQRLRSWWNKDAAEVAEEETRMTQAERDVAEEDYEARKDDVASHGDYLGGTIGADFERDSETPR*
Ga0137374_1002055033300012204Vadose Zone SoilMTILRRFRAWWNKDALTRAEEETRMTEAERDVAKEDYEARKDDVAVRSDVLAGGAADYERDSEPPRP*
Ga0137374_1003849363300012204Vadose Zone SoilMAGFLNRLRAWWNKDALAKAEEETRMSPLERDVADEDYEARKEDQSISGGRLAGGTADYERDSEPPRDPAP*
Ga0137374_1031213213300012204Vadose Zone SoilNCGMALLRRFRAWWNKDALERAEEETRMTEGERDTAEEDFELCKVDVAMRSKRLGGGADYERDSEPPRR*
Ga0137374_1051451523300012204Vadose Zone SoilMALFRRLSAWWNRDALERAEQETLMSQSERDVADEDYEARKEDLAARSGPLSGGAADFERDSEPPRP*
Ga0137367_1002130423300012353Vadose Zone SoilMAGFLNRLRAWWNKDALAKAEEETRMSPLGRDVAEEDYEARKEDQSISGGRLAGGTADYERDSEPPRDPAP*
Ga0137367_1028858213300012353Vadose Zone SoilTAKEEARMTQAERDVAEEDYEARKDDVAAERRWVGGTADYERDSETPQRSDLPD*
Ga0137369_1000805423300012355Vadose Zone SoilMAGFLKRLSAWWNKDVLVKANEETRMTQAERDVAEEDYEGRKDDVLTSDEILAGGTADYERDSEPPRDPAP*
Ga0137369_1007336723300012355Vadose Zone SoilMAAFLNRLRAWWNKDALAKAEEETRMSPLERDVADEDYEARKEDQSISGGRLAGGTADYERDSEPPRDPAP*
Ga0137369_1037564833300012355Vadose Zone SoilMAGLFSRLRAWWSKDKLARADEGTHMTEAERDIEEEDFEGQKDDVAIKGDFYAGGVADYERDSEPPR*
Ga0137368_1001634623300012358Vadose Zone SoilMSLLRRFRASWNKDALERAEEETRMTEGERDTAEEDFELRKVDVAMRSKRLGGGADYERDSEPPRR*
Ga0137375_1059507323300012360Vadose Zone SoilMALLRRFRAWWNKDALERAEEETRMTEGERDTAEEDFELCKVDVAMRSKRLGGGADYERDSEPPRR*
Ga0137375_1141676823300012360Vadose Zone SoilMAGLFQRLRSWWNRDAAEVAEEETRMNQVERDVAEEDYEARKDDVASHGDYLGGTIGTDFERDSE
Ga0134045_116003613300012409Grasslands SoilMSFFRRLRAWWHKDELERAEEETRMAAGERAAAEEDFEARKDDTRARSSYLAGGVTDYERDSEPPTRS*
Ga0157350_104941213300012499Unplanted SoilMTLLQKVRSWWNRDAVERAEEETRMTPHERDVAEEDFEGLKDDVATGSGFLAGGAADYER
Ga0157327_100225723300012512Arabidopsis RhizosphereMTLLQKVRSWWNRDAVERAEEETRMTPHERDVAEEDFEGLKDDVATGSGFLAGGAADYERDSEPPR*
Ga0137373_1036646943300012532Vadose Zone SoilRFRAWWNKDALTRAEEETRMTEAERDVAKEDYEARKDDVAVRSDVLAGGAADYERDSEPPRP*
Ga0137358_1075789313300012582Vadose Zone SoilMSVFRRFKAWWRKDDLKVASEETRMKPAERDVAEEDYEGRKDDTAVQSGILAGGQGDYERDSEPPG*
Ga0164300_1082727623300012951SoilMSFVDKIRSWWGKDEVELADEETHMTEGERDVADEDYEARKDDVAVRSGRLMGGVGDYERDSEPPR*
Ga0164299_1030509733300012958SoilMAFLGRLRSWWNKDAIELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGSADYERDSEPPGP*
Ga0164299_1074535323300012958SoilMAFLARFRSWWNKDAVELAEEETRMTQVERDSAEQDYQARKDDSALLQRPLGGDTDYERDSEPPRP*
Ga0164302_1129083413300012961SoilMAFLGRLRSWWNKDAVELAEEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGAEYERDSEPPEP*
Ga0164305_1150997023300012989SoilMSFVDKIRSWWGKDELALADEETHMTESERDVAEEDYEARKDDVAMRSGRFMGGVADYERDSEPPR*
Ga0164305_1203712023300012989SoilMSFVSKVRAWWGKDELELADEETHMTEGERDVADEDYEARKDDVAVRSGRLMGGVGDYERDSEPPR*
Ga0120150_110409023300013294PermafrostRGSVLTMAGFIQRFRAWWSTDKLERASEETRMTQAERDLAEEDYEGRKDDVLVKGEIFAGGAADYERDSEPPRDPAP*
Ga0157378_1282028313300013297Miscanthus RhizosphereMAFLGRLRSWWNKDAVELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGDAEYERDSEPPGP*
Ga0157375_1094554413300013308Miscanthus RhizosphereMAFLGRLRSWWNKDAAELAEEETRMTQAERDSAEQDYQARKDDSAVRQRPLGGDTDY
Ga0120111_109885823300013764PermafrostMAGFIQRFRAWWSRDKLERASEETRMTQAERDLAEEDYEGRKDDVLVKGEIFAGGAAHYERDSEPPRDPAP*
Ga0120155_116149633300013768PermafrostMAGFLQRLSAWWSRDKLERASEETRMTQAERDLAEEDYEGRKDDVLVKGEIFAGGAADYERDSEPPRDPTP*
Ga0157380_1020793533300014326Switchgrass RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQAERDSVEQDYQARKDDSAARQRPLGGDTDYERDSEPPRP*
Ga0120171_108146713300014827PermafrostMARLRQWLRARWNKDALVTAEEETRMTQAERDVAEEDYEARKDDVSVSERLAGGVADYERDSEPPPDPTP*
Ga0120193_1007674723300014965TerrestrialMGFLRRIRAWWNKDELDRAELETRMTAAERDVAEEDYEARKDDEAARSGLLSGGTADYKRDSEPPRP*
Ga0120193_1007818423300014965TerrestrialMDLLRRLRGWWNKDALERAEQETRMTPAERDAAEEDYEGRKDDLAARSDLLGGGAADYERDSEPPRP*
Ga0157379_1057126413300014968Switchgrass RhizosphereLPDFDLGGTKDAVELAEQETRMTQAERDFAEQDYQARKDDSAVRQRPLGGDTD
Ga0157376_1279735113300014969Miscanthus RhizosphereMAFLGRLRSWWNKDAAELAEEETRMTQAARDSAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0173483_1059356613300015077SoilMPVSVFRKFRAWWSKDDLEVANEEARMKPAERDVAEEDYEGRKDDIAVRSGYLQGGQADYERD
Ga0132258_1268037723300015371Arabidopsis RhizosphereVAGLLQRLRAWWNRDALDAAEEETHMTPHERDLAQEDYEARKDDLDARSGYLAGGAGDFERDSERPR*
Ga0132256_100003442123300015372Arabidopsis RhizosphereMTLLQKVRSWWNRDAVERADEETRMTPHERDVAEEDFEGLKDDVATGSGFLAGGAADYERDSEPPR*
Ga0132256_10333180113300015372Arabidopsis RhizosphereMAFLGRLRSWWNKDAIELADEETRMTQAERDSAEQDYQARKDDLAVHQHRLGGGAEYERDSEPPEP*
Ga0132257_10004906653300015373Arabidopsis RhizosphereMALLGRLRSWWNKDAVELADEETRMTQAERDSAERDYEARKDDLAVHQHRLGGGAEYERDSEPPEP*
Ga0132257_10166969423300015373Arabidopsis RhizosphereLPDFDLGGTKDAVELAEQETRMTQAERDFAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP*
Ga0184605_1000595633300018027Groundwater SedimentMALLRRLRAWVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVASRSDTLAGGAADYERDSEPPPR
Ga0184623_1009840523300018056Groundwater SedimentMTSLLNKLRTWWSRDTLEKADEETRMTQAERDVAEEDYEGRKDDVLTSDELLAGGTADYERDSEPPRDPAP
Ga0184623_1014240013300018056Groundwater SedimentMAGLIQRLRAWWSKDATEVAEEETRMTQAERDVADEDYEARKDDLSIRGSYEAGGITDYEADSEKPPRSDLPD
Ga0184619_1007605823300018061Groundwater SedimentMTVFSKLRAWLAKDDLEVAEEESRMTPAERDVAEEDYEASKDDVAVEGGRLAGGQADYEADSEPPR
Ga0184618_1000029563300018071Groundwater SedimentVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVASRSDTLAGGAADYERDSEPPPR
Ga0184632_1038118313300018075Groundwater SedimentMSLLRRLSAWWNRDALERAEDETRMTASERDVAEEDYEARKDDVVARDGLLGGGATDYEADSERPRRQDSS
Ga0066669_1212610723300018482Grasslands SoilMSFFRRLRAWWHKDELERAEEETRMTAGERAAAEEDFEARKDDTRARSSYLAGGVTDYERDSEPPTRS
Ga0066669_1236780323300018482Grasslands SoilMSAFRRLKAWWSKDDLEVAEEVTRMTAAERDVAEEDYEARKDDTAVQSGRFLGGRADYERDSEPPR
Ga0184643_104389923300019255Groundwater SedimentALEPAVGFGHSQAARSGGSVAYCRMALLRRLRAWVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVASRSDTLAGGAADYERDSEPPPR
Ga0193739_105822023300020003SoilMALLRRLSAWWNRDALERAEEETRMTPIERDVAEEDYEGRKDDVTVRDGLLGGGAADYEADSERPEPPRS
Ga0193721_110751113300020018SoilVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVASRSDTLAGGAADYERDSEPPP
Ga0193737_103334413300021972SoilMALLRRLSAWWNRDALERAEDETRMTASERDVAEEDYEARKDDVVARDGLLGGGATDYEADSERPRRQDSS
Ga0207642_1051651223300025899Miscanthus RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQAERDFAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP
Ga0207688_1055122323300025901Corn, Switchgrass And Miscanthus RhizosphereMALLARFRAWWNKDAVELAEEETRMTQAERDFAEQDYLTRKDDSAVRQRPLGGDTDYERDSEPPRP
Ga0207643_1014343723300025908Miscanthus RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQVERDSAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP
Ga0207646_1143515823300025922Corn, Switchgrass And Miscanthus RhizosphereLEKAGEETSMTAAERDVAEEDYEGRKDDDYVSRDRLAGGTADYERDSEPPPDPTP
Ga0207700_10000024853300025928Corn, Switchgrass And Miscanthus RhizosphereMAVALLRRLRDWWYKDKLERAQEETRMTPAERDTAEEDYEARKDDVTAQEYLAGGVADYERNSEPPPNH
Ga0207670_1003818733300025936Switchgrass RhizosphereMAFLARFRSWWNKDAVELAEEETRMTQAERDSVEQDFQARKDDSAVRQRPLGGDTDYERDSEPPRP
Ga0207704_1047966323300025938Miscanthus RhizosphereMAFLGRLRSWWNKDAVELADEETRMTQAERDSAEQDYEARKDDLAVHQHRLGGGADYERDSEPPGP
Ga0207704_1189854613300025938Miscanthus RhizosphereKDAAELAEEETRMTQAERDSAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP
Ga0207661_1148357013300025944Corn RhizosphereKDAVELAEEETRMTQAERDFAEQDYLTRKDDSAVRQRPLGGDTDYERDSEPPRP
Ga0307293_1003824923300028711SoilMALLRRFRAWVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVAARSDTLAGGAADYERDSEPPPR
Ga0307311_1008005923300028716SoilMALLRRFRAWVTKDALGRAEEETRMTQSERDVAEEDYEARKDDVASRSDTLAGGAADYERDSEPPPR
Ga0307318_1014287213300028744SoilAGFLHRLRGWWNKDALAKAEEEAHMTQAERDVADEDYEGRKEDVLISDQLLPGGSADYERDSEPPKPY
Ga0307320_1019156623300028771SoilVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVAARSDTLAGGAADYERDSEPPPR
Ga0307287_1038159913300028796SoilMALLRRLRAWVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVAARSDTLAGGAADYERDSEPPPR
Ga0307305_1051060223300028807SoilHESARSGGSVAYCRMALLRRFRAWVNKDTLGRAEEETRMTQSERDVAEEDYEARKDDVAARSDTLAGGAADYERDSEPPPR
Ga0307312_1014167723300028828SoilVNKDALGRSEEETRMTQSERDVAEEDYEARKDDVAARSDTLAGGAADYERDSEPPPR
Ga0307312_1103051123300028828SoilMAGFLSRLRAWWSKDTLERASEETRMTQAERDLAEEDYEGRKADVLAKGERFAGGAADYERDSEPPRDPTP
Ga0307278_1000354973300028878SoilMALLRRFRAWWNKDALELAEEEPRMTEGERDIAEEDYEARKDDVALRSNRLAGGVADYERDSEPPRR
Ga0247826_1063788623300030336SoilMALLQRLRAWWNKDAVEQAEGEASMTPAERDVAEEDFEARKDDVAAETFLGGAADYERDLEAPPPEDDPDR
Ga0310812_1034021513300032421SoilMAVALLRRLRDWWYKDKLERAQEETRMTPAERDTAEEDYEARKDDVTAQEYLAGGVAD
Ga0247830_1094521323300033551SoilMSKISLPRWNKDAVELAEEETRMTQAERDLAEQDYQARKDDSAVRQRPLGGDTDYERDSEPPRP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.