Metagenome Family F052436

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052436
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	67 residues
Representative Sequence	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASAAFATTVHKRTYKHPTDVHFQAAGESSSGASHE
Number of Associated Samples	109
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.28 %
% of genes near scaffold ends (potentially truncated)	25.35 %
% of genes from short scaffolds (< 2000 bps)	82.39 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.296 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (11.268 % of family members)
Environment Ontology (ENVO)	Unclassified (35.915 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.775 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.58% β-sheet: 0.00% Coil/Unstructured: 68.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00248	Aldo_ket_red	37.32
PF00691	OmpA	19.01
PF14595	Thioredoxin_9	7.04
PF00069	Pkinase	2.11
PF01964	ThiC_Rad_SAM	1.41
PF13439	Glyco_transf_4	1.41
PF13620	CarboxypepD_reg	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	8.45
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	1.41

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.30 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.30 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.30 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	61.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.15 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	61.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.45 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.70 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.45 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.82 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.70 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.45 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.82 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.70 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.45 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.82 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.70 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.45 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	6.34 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.52 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.82 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.70 %
Unclassified	root	N/A	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.45 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	6.34 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.52 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.82 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.70 %
Unclassified	root	N/A	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_122020800	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	834	Open in IMG/M
3300001686\|C688J18823_10566207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	726	Open in IMG/M
3300004114\|Ga0062593_100022727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3365	Open in IMG/M
3300004114\|Ga0062593_101953193	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300004156\|Ga0062589_100092487	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1892	Open in IMG/M
3300004157\|Ga0062590_100066947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2098	Open in IMG/M
3300004157\|Ga0062590_101514794	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300004463\|Ga0063356_100206102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2326	Open in IMG/M
3300004463\|Ga0063356_100253701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2135	Open in IMG/M
3300004480\|Ga0062592_100859044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	812	Open in IMG/M
3300005290\|Ga0065712_10009651	All Organisms → cellular organisms → Bacteria	3078	Open in IMG/M
3300005293\|Ga0065715_10626893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	689	Open in IMG/M
3300005327\|Ga0070658_10217565	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1615	Open in IMG/M
3300005329\|Ga0070683_100044527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4092	Open in IMG/M
3300005331\|Ga0070670_100984501	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	766	Open in IMG/M
3300005337\|Ga0070682_101590897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	565	Open in IMG/M
3300005344\|Ga0070661_100195315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1544	Open in IMG/M
3300005347\|Ga0070668_102113224	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005354\|Ga0070675_100623863	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005355\|Ga0070671_100415774	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300005438\|Ga0070701_10321392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	958	Open in IMG/M
3300005455\|Ga0070663_101320231	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300005456\|Ga0070678_100396445	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300005457\|Ga0070662_100280646	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300005518\|Ga0070699_100778919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	875	Open in IMG/M
3300005530\|Ga0070679_101090047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	743	Open in IMG/M
3300005543\|Ga0070672_100458388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300005843\|Ga0068860_102859804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	500	Open in IMG/M
3300006031\|Ga0066651_10121249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1342	Open in IMG/M
3300006058\|Ga0075432_10572582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	513	Open in IMG/M
3300006853\|Ga0075420_101361435	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300006876\|Ga0079217_10007901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3295	Open in IMG/M
3300006876\|Ga0079217_10983700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	614	Open in IMG/M
3300006876\|Ga0079217_11486458	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	535	Open in IMG/M
3300006881\|Ga0068865_101547086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	595	Open in IMG/M
3300006894\|Ga0079215_10594255	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300006918\|Ga0079216_10728352	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	713	Open in IMG/M
3300006918\|Ga0079216_10792113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	694	Open in IMG/M
3300009094\|Ga0111539_10236779	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300009098\|Ga0105245_11014610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300009100\|Ga0075418_10417757	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300009148\|Ga0105243_10027426	All Organisms → cellular organisms → Bacteria	4364	Open in IMG/M
3300009156\|Ga0111538_10037401	All Organisms → cellular organisms → Bacteria	6270	Open in IMG/M
3300009174\|Ga0105241_12264680	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	540	Open in IMG/M
3300009177\|Ga0105248_10087374	All Organisms → cellular organisms → Bacteria	3509	Open in IMG/M
3300009553\|Ga0105249_10328838	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300009789\|Ga0126307_10032792	All Organisms → cellular organisms → Bacteria	4004	Open in IMG/M
3300009840\|Ga0126313_10029601	All Organisms → cellular organisms → Bacteria	3737	Open in IMG/M
3300009840\|Ga0126313_10492467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	981	Open in IMG/M
3300010036\|Ga0126305_10665201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	703	Open in IMG/M
3300010037\|Ga0126304_10136028	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300010038\|Ga0126315_10644649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	687	Open in IMG/M
3300010039\|Ga0126309_10443226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	787	Open in IMG/M
3300010040\|Ga0126308_10057521	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300010041\|Ga0126312_10247723	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300010044\|Ga0126310_10965863	Not Available	668	Open in IMG/M
3300010045\|Ga0126311_10050335	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2675	Open in IMG/M
3300010045\|Ga0126311_10190113	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300010045\|Ga0126311_11585334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300010166\|Ga0126306_10273346	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300010166\|Ga0126306_10361005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1130	Open in IMG/M
3300010166\|Ga0126306_10501110	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	960	Open in IMG/M
3300010399\|Ga0134127_11276450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	803	Open in IMG/M
3300011119\|Ga0105246_10471010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1060	Open in IMG/M
3300012046\|Ga0136634_10088214	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300012212\|Ga0150985_121519450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1111	Open in IMG/M
3300012910\|Ga0157308_10126474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	788	Open in IMG/M
3300012911\|Ga0157301_10404563	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300012913\|Ga0157298_10205856	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	635	Open in IMG/M
3300012914\|Ga0157297_10247547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	643	Open in IMG/M
3300012989\|Ga0164305_11798050	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	553	Open in IMG/M
3300013308\|Ga0157375_12412413	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	628	Open in IMG/M
3300014326\|Ga0157380_10743535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300015262\|Ga0182007_10133448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300015262\|Ga0182007_10349841	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	554	Open in IMG/M
3300015371\|Ga0132258_10419544	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300015371\|Ga0132258_10808601	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300015371\|Ga0132258_11115870	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300017792\|Ga0163161_11042579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	700	Open in IMG/M
3300018073\|Ga0184624_10141441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300018469\|Ga0190270_11226967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	789	Open in IMG/M
3300018476\|Ga0190274_10749031	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1028	Open in IMG/M
3300018476\|Ga0190274_10848648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	975	Open in IMG/M
3300018476\|Ga0190274_13160972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	554	Open in IMG/M
3300018482\|Ga0066669_11577101	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300019362\|Ga0173479_10164280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300021384\|Ga0213876_10170010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1160	Open in IMG/M
3300021445\|Ga0182009_10311044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	796	Open in IMG/M
3300022756\|Ga0222622_10041918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2528	Open in IMG/M
3300022756\|Ga0222622_10133109	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300022756\|Ga0222622_10273324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1153	Open in IMG/M
3300022756\|Ga0222622_10357652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1019	Open in IMG/M
3300025315\|Ga0207697_10012128	All Organisms → cellular organisms → Bacteria	3625	Open in IMG/M
3300025893\|Ga0207682_10510986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	569	Open in IMG/M
3300025907\|Ga0207645_10028275	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300025925\|Ga0207650_10214398	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300025930\|Ga0207701_10242829	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300025931\|Ga0207644_10014647	All Organisms → cellular organisms → Bacteria	5252	Open in IMG/M
3300025933\|Ga0207706_10514125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1033	Open in IMG/M
3300025937\|Ga0207669_10460949	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1009	Open in IMG/M
3300025940\|Ga0207691_10426280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300025942\|Ga0207689_10810492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	790	Open in IMG/M
3300025944\|Ga0207661_10184146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1827	Open in IMG/M
3300025945\|Ga0207679_10048013	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3105	Open in IMG/M
3300025945\|Ga0207679_10154091	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300025945\|Ga0207679_11444527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300025945\|Ga0207679_11885584	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300025972\|Ga0207668_10957527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	764	Open in IMG/M
3300026095\|Ga0207676_11201962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300026121\|Ga0207683_11151868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	719	Open in IMG/M
3300026142\|Ga0207698_10049644	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300027637\|Ga0209818_1161825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	634	Open in IMG/M
3300028754\|Ga0307297_10050637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300028778\|Ga0307288_10095398	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300028812\|Ga0247825_11115384	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	575	Open in IMG/M
3300030336\|Ga0247826_10581435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	857	Open in IMG/M
3300030496\|Ga0268240_10019293	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300030496\|Ga0268240_10026545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1136	Open in IMG/M
3300031548\|Ga0307408_101310054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	679	Open in IMG/M
3300031824\|Ga0307413_10485797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	988	Open in IMG/M
3300031852\|Ga0307410_12085130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300031901\|Ga0307406_10137820	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1723	Open in IMG/M
3300031901\|Ga0307406_11793590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300031938\|Ga0308175_100070127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3118	Open in IMG/M
3300031938\|Ga0308175_100337584	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300031938\|Ga0308175_100495264	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1298	Open in IMG/M
3300031938\|Ga0308175_100591477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1193	Open in IMG/M
3300031939\|Ga0308174_10021835	All Organisms → cellular organisms → Bacteria	3978	Open in IMG/M
3300031943\|Ga0310885_10621074	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300031995\|Ga0307409_102553081	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031996\|Ga0308176_11309941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	770	Open in IMG/M
3300031996\|Ga0308176_11544600	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	707	Open in IMG/M
3300032002\|Ga0307416_100949670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300032002\|Ga0307416_101624675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	751	Open in IMG/M
3300032002\|Ga0307416_102685380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	595	Open in IMG/M
3300032002\|Ga0307416_102765274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	587	Open in IMG/M
3300032005\|Ga0307411_11863021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	559	Open in IMG/M
3300032005\|Ga0307411_12333400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	503	Open in IMG/M
3300032074\|Ga0308173_10210072	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300032074\|Ga0308173_10803775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300032126\|Ga0307415_102191872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	541	Open in IMG/M
3300033551\|Ga0247830_11205627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.82%
Host-Associated	Host-Associated	47.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.59%
Plants	Host-Associated → Plants	47.18%
Aquatic	Environmental → Aquatic	4.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.97%
Sediment	Environmental → Aquatic → Sediment	3.52%
Freshwater	Environmental → Aquatic → Freshwater	0.70%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.34%
Loam	Environmental → Terrestrial → Soil → Loam	4.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.52%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.41%
Ice	Environmental → Aquatic → Freshwater → Ice	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.41%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.41%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1220208002	3300000956	Soil	MHDAPTGSRTDRYVPFKQEGWGVALFIVLLAVGSAAMATYVHKTTYRPPTDVHFRAAGSAASHE*
C688J18823_105662072	3300001686	Soil	MHDSSPPHVDRHIPYKQEGWGIALFVVLLAAASAGFATFVHKKTYLHPTDTHFHAAGTTQTTGSHE*
Ga0062593_1000227273	3300004114	Soil	MPAANPRSHVDRYVPFKQEGWGVALFIVLLAAASVAFATVVHKRTYKHPTDVHFQAAGTSSSGASHE*
Ga0062593_1019531932	3300004114	Soil	MHDAKVRPHVARYVPFKQEGWGIALFIVLLALASATFATIVHKRTYLHPTDVHFQAAGASSTGASHE*
Ga0062589_1000924871	3300004156	Soil	MPAANPRSHVDRYVPFKQEGWGVALFIVLLAAASVAFATVVHKRTYKHPTDVHFQAAGTSSSG
Ga0062590_1000669471	3300004157	Soil	PRSHVDRYVPFKQEGWGVALFIVLLAAASVAFATVVHKRTYKHPTDVHFQAAGTSSSGASHE*
Ga0062590_1015147942	3300004157	Soil	MHGPNTRPHVDRYVPFKQEGWGVALFIVLLAIASVAFATTVHKRTYKHPTDVHFQAAGESSPGASHE*
Ga0063356_1002061022	3300004463	Arabidopsis Thaliana Rhizosphere	MHAHNARPHVDRHIPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGHSSSGAAH*
Ga0063356_1002537012	3300004463	Arabidopsis Thaliana Rhizosphere	MHVPPARPHVDRHIPFKQEGWGVALAIVLLAIASVAFATTVHKRTYKHPTDVHFQAAGHSSSDAAH*
Ga0062592_1008590441	3300004480	Soil	VALVITVLLGAFMSDVKTRPHVDRYVPFKQEGWGIALFIVLLALASATFATIVHKRTYLHPTDVHFQAAGASSTGASHE*
Ga0065712_100096514	3300005290	Miscanthus Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLALASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0065715_106268932	3300005293	Miscanthus Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHKRTFKHPTDVHFQAAGTSSSDAAH*
Ga0070658_102175652	3300005327	Corn Rhizosphere	MHGPNTRPHVDRYVPFKQEGWGIALLIVLLAAASVAFATTVHHRTYKHPTDVRFQAAGTSSAGASHE*
Ga0070683_1000445274	3300005329	Corn Rhizosphere	MHGPNTRPHVDRYVPFKQEGWGIALLIVLLAAASVAFATTVHKRTYKHPTDVRFQAAGTSSAGASHE*
Ga0070670_1009845012	3300005331	Switchgrass Rhizosphere	MHGPNTRPHVDRYVPFKQEGWGVALFIVLLAAASVAFATTVHHRTYKHPTDVRFQAAGTSSAGASHE*
Ga0070682_1015908971	3300005337	Corn Rhizosphere	MSDVKTRPHVERYVPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYKHPTDVRFRAAGSAGAHE*
Ga0070661_1001953152	3300005344	Corn Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0070668_1021132242	3300005347	Switchgrass Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHKRTFKHPTDVHFQAAGTSSS
Ga0070675_1006238631	3300005354	Miscanthus Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHKRTYKHPTDVHFQAAGTSSSDAAH*
Ga0070671_1004157741	3300005355	Switchgrass Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASAAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0070701_103213921	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	GAFMHGPNTRPHVDRYIPFKQEGWGVALFIVLLALASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0070663_1013202312	3300005455	Corn Rhizosphere	VLLGAFMHDAKVRPHVARYVPFKQEGWGIALFVVFLAIASAAFATIVHKRTYLHPTDVHFQATGASSTGASHE*
Ga0070678_1003964452	3300005456	Miscanthus Rhizosphere	MHDASPRPHVDRYVPFKQEGWGIALFIVLLAVASATFATIVHKRTYKHPTDVHFQAAGTSNSGASHE*
Ga0070662_1002806462	3300005457	Corn Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0070699_1007789191	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HDAPAGSRADRHVPFKQEGWGVALFIVLLAAGSVAMATYVHKTTYRPPTDVHFRAAGSAASHE*
Ga0070679_1010900471	3300005530	Corn Rhizosphere	MHDASPRPHVDRYVPFKQEGWGIALFIVLLAVASATFATIVHKRTYKHPTDVHFQAAGTSSSGASHE*
Ga0070672_1004583882	3300005543	Miscanthus Rhizosphere	MQDNAAPHVDRHIPFKQEGWGVALFIVLLALGSAAFATYVHKTTYKAPTDVHFRAAGSAATH*
Ga0068860_1028598041	3300005843	Switchgrass Rhizosphere	VALEIPVLLGAFMHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASAAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0066651_101212492	3300006031	Soil	MHDPNVRPHVDRYVPFKQEGWGVALFIVLLAIGSAAFATIVHQRTYKHPTDVRFRAAGESSSGTSHE*
Ga0075432_105725821	3300006058	Populus Rhizosphere	FMHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0075420_1013614351	3300006853	Populus Rhizosphere	MHAPNARPHVDRHIPFKQEGWGVALFIVLLAVASAAFATTVHKRTYKHPTDVHFQ
Ga0079217_100079013	3300006876	Agricultural Soil	MHDANARPHVDRYIPFKREGWGIALFIVVLAIASAAFATVVHKRTYKHPTDVHFQAAGSAAGGASHGAASASH*
Ga0079217_109837001	3300006876	Agricultural Soil	MHDANVRPHVDRHIPFKREGWGIALFIVVLAIGSAAFATVVHQRTYKHPTDVQFRAAGAASGGAAHGAASASH*
Ga0079217_114864582	3300006876	Agricultural Soil	MHAHNARPHVDRHIPFKQEGWGIALVIVLLAAASIAFATTVHKRTYKRPTDVHFQAVGRSSSGGAH*
Ga0068865_1015470861	3300006881	Miscanthus Rhizosphere	VALVIPVLLGAFMHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASAAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0079215_105942552	3300006894	Agricultural Soil	MHVPNARPHADRHIPFKQEGWGIALVIVLLAVASVVFATTVHKRTYKHPTDVHFQAAGSSSSGGAH*
Ga0079216_107283522	3300006918	Agricultural Soil	MHDANARPHVDRHIPFKREGWGIALFIVGLAIASAVFATVVHKRTYKHPTDVHFQAAGSAAGGASHGAASASH*
Ga0079216_107921133	3300006918	Agricultural Soil	MHAQNSRPHVDRHIPFKQEGWGIALAIVLLAAASIAFATTVHKRTYKHPTDVHFQAAGRSSSGGAH*
Ga0111539_102367792	3300009094	Populus Rhizosphere	MHGPNTRPHVDRYVPFKQEGWGVALFIVLLAAAAVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0105245_110146102	3300009098	Miscanthus Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGASSSDAAH*
Ga0075418_104177572	3300009100	Populus Rhizosphere	MHAPNARPHVDRHIPFKQEGWGVALFIVLLAVASAAFATTVHKRTYKHPTDVHFQAAGHSSSDGSH*
Ga0105243_100274263	3300009148	Miscanthus Rhizosphere	MHGPNTRPHVDRYVPFKQEGWGIALLIVLLAAASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0111538_100374012	3300009156	Populus Rhizosphere	LVIPVLLGAFMHGPNTRPHVDRYIPFKQEGWGVALFIVLLALASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0105241_122646802	3300009174	Corn Rhizosphere	LGITVLLGAFMHDAKTPHVERYVPFKQEGWGIALFIVLLAVASATFATIVHKRTYLHPTDVHFQAAGASSTGASHE*
Ga0105248_100873741	3300009177	Switchgrass Rhizosphere	LVIPVLLGAFMHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0105249_103288382	3300009553	Switchgrass Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLALASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHA*
Ga0126307_100327924	3300009789	Serpentine Soil	MVRVACHHAAIGVALSTTISTGAFMHDSNARPHVDRYVPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYKHPTDTHFRAAGAGSSSASHD*
Ga0126313_100296014	3300009840	Serpentine Soil	MHDSTSRPHVDRHVPFQQEGWGIALFIVLLAVGSAAFATYVHKTTYKHPTDTHFRAAGTASSSASHE*
Ga0126313_104924671	3300009840	Serpentine Soil	LVITVLLGAFMHDANTRPHVDRYVPFKQEGWGIALFIVLLAIASAAFATVVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0126305_106652011	3300010036	Serpentine Soil	ANARPHVDRHIPFKQEGWGIALLIVLLAVGSAAFATVVHKRTYKHPTDVHFQAAGQASAGASH*
Ga0126304_101360283	3300010037	Serpentine Soil	MHAPNARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHTRTYKHPTDVHFQAAGASSSDAAH*
Ga0126315_106446491	3300010038	Serpentine Soil	LVITVLLGAFMHDANTRPHVDRYVPFKQEGWGIALFIVLLAIASAAFATYVHKTTYKHPTDTHFRAA
Ga0126309_104432261	3300010039	Serpentine Soil	DRYVPFKQEGWGTALFIVLLAVGSAAFATYVHKTTYKHPTDTQFRAAGTGSSNASHE*
Ga0126308_100575212	3300010040	Serpentine Soil	MECGPCHRAAIEVALTITVILGAFMHDSNTRPHVDRYVPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYLHPTDTHFRAAGTGSSTASHD*
Ga0126312_102477232	3300010041	Serpentine Soil	MHDSTARPHVDRHVPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYKHPTDTHFRAAGTGSSSASHD*
Ga0126310_109658632	3300010044	Serpentine Soil	MHDSTARPHVDRHVPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYRHPTDTRFQAAGSSSASASHE*
Ga0126311_100503351	3300010045	Serpentine Soil	HVDRHVPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYKHPTDTHFRAAGTASSSASHE*
Ga0126311_101901132	3300010045	Serpentine Soil	MHDSNARPHVDRYVPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYKHPTDTHFRAAGTGSSSASHD*
Ga0126311_115853341	3300010045	Serpentine Soil	SSFDHHRLLGAFMHAPNARPHVDRHTPFKQEGWGIALLIVLLAVASAAFATTVHKRTYKHPTDVHFQAAGHSSSGASH*
Ga0126306_102733462	3300010166	Serpentine Soil	MHHPNVRPHVDRFIPFKQEGWGIALFIVVLAIASAAFATVVHKRTYKQPTDVHFQAAGSATGGASHGAASASH*
Ga0126306_103610052	3300010166	Serpentine Soil	MHDANVRPHVDRHIPFKQEGWGVALFIVLLAVASAAMATYVHKTTYRHPTDVRFQAAGSATPTASH*
Ga0126306_105011102	3300010166	Serpentine Soil	LRITVILGAFMHDSHTRPHVDRHVPFKQEGWGIALFIVLLAVSSAAFATYVHKTTYKHPTDTRFQAAGSSSPSASH*
Ga0134127_112764502	3300010399	Terrestrial Soil	VALVITVLLGALMHGPNTRPHVDRYVPFKQEGWGIALLIVLLAAASVAFATTVHHRTYKHPTDVRFQAAGTSSAGASHE*
Ga0105246_104710102	3300011119	Miscanthus Rhizosphere	LVITVLLGAFMHDAKVRPHVARYVPFKQEGWGIALFIVLLALASATFATIVHKRTYLHPTDVHFQAAGASSTGASHE*
Ga0136634_100882142	3300012046	Polar Desert Sand	MHDNSPAPHVDRYIPFKQEGWGIALIVVLLAVATAGWATYVHKTTYKAPTDVHFRAAGSSSPAAAH*
Ga0150985_1215194502	3300012212	Avena Fatua Rhizosphere	MHDTNPQPHVARYVPFKQEGWGVALFIVLLAIASAAFAATVHNKTYKHPTDLRFRAAGESSSGTSHE*
Ga0157308_101264742	3300012910	Soil	MHAHNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGQSSSGVAH*
Ga0157301_104045631	3300012911	Soil	MHDANARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHKRTYKHPTDVHFQAAGTSSSDAAH*
Ga0157298_102058561	3300012913	Soil	MHAPNARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0157297_102475472	3300012914	Soil	GAFMHAPNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGHSSSGAAH*
Ga0164305_117980501	3300012989	Soil	LVITVLLGAIMSDVKTRPHVERYVPFKQEGWGIALFIVFLAVASAAFATIVHKRTYLHPTDVHFQAAGASSTGASHE*
Ga0157375_124124132	3300013308	Miscanthus Rhizosphere	FSLENSMQQNAAPHVDRHIPFKQEGWGVALFIVLLAVGSAAFATYVHKTTYKHPTDVRFRAAGSAGAHE*
Ga0157380_107435352	3300014326	Switchgrass Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGQSSSGVAH*
Ga0182007_101334482	3300015262	Rhizosphere	LVITVLLGAFMHDANVRSHTDRYVPFKQEGWGVALFIVLLAIASAAFATVVHKRTYKHPTDVRFQAAG
Ga0182007_103498411	3300015262	Rhizosphere	MSDVKTRPHVERYVPFKQEGWGIALFVVFLAIASAAFATIVHKRTYLHPTDVHFQAAGASSTGASHE*
Ga0132258_104195442	3300015371	Arabidopsis Rhizosphere	MHDSSPPHVDRHIPYKQEGWGFALFIVLLAAASAGFATFVHKKTYLHPTDTHFHAAGTTQTTGSHE*
Ga0132258_108086012	3300015371	Arabidopsis Rhizosphere	MQQNATPHVDRHIPFKQEGWGVALFIVLLAVGSAAFATYVHKTTYKAPTDVHFRAAGSATTH*
Ga0132258_111158702	3300015371	Arabidopsis Rhizosphere	LVIPVLLGAFMHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASAAFATTVHKRTYKHPTDVHFQAAGESSSGASHE*
Ga0163161_110425792	3300017792	Switchgrass Rhizosphere	MHDSSPPHVDRHIPYKQEGWGVALFIVLLAAASAGFATFVHKKTYLHPTDTHFHAAGTTQTTGSHE
Ga0184624_101414412	3300018073	Groundwater Sediment	MHAPNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGQSSSGVAH
Ga0190270_112269672	3300018469	Soil	RHVPFKQEGWGVALFVVLLVIASVALATTVHKRTYKHPTDVHFQAAGHSSSSASH
Ga0190274_107490312	3300018476	Soil	MHAHNARPHVDRHTPFKQEGWGIALFIVLLAVASAAFATTVHKRTYKHPTDVHFQAAGHSSSGASH
Ga0190274_108486481	3300018476	Soil	MHAPNARPHVDRHTPFKQEGWGIALFIVLLAVGSAAFATTMHKRTYKHPTDVHFQAAGHSSSGASH
Ga0190274_131609722	3300018476	Soil	MHDPNVRPHVDRYVPFKQEGWGIALFVVLLAVGSAAMATYVHKSTYKHPTDVHFRAAGAATSGGSHE
Ga0066669_115771011	3300018482	Grasslands Soil	MHAPNVRPHVDRYVPFKQEGWGVALFIVLLAIGSAAFATIVHQRTYKHPTDVRFRAAGESSSGTSHE
Ga0173479_101642802	3300019362	Soil	MHGPNTRPHVDRYVPFKQEGWGIALFIVLLAIASVAFATTVHKRTYKHPTDVRFQAAGESSSGASHE
Ga0213876_101700102	3300021384	Plant Roots	MHDSSAHHAPRHTPFKQEGWGIALFIVLLAVATAGWATYVHKTTYKHPTDVRFHAAGSAGAHE
Ga0182009_103110442	3300021445	Soil	MSDVKTRPHVERYVPFKQEGWGIALFVVFLAIASAAFATIVHKRTYLHPTDVHFQAAGASSTGASHE
Ga0222622_100419184	3300022756	Groundwater Sediment	MHGPNTRPHVDRYVPFKQEGWGIALLIVLLAAASVAFATTVHKRTYKHPTDVRFQAAGTSSAGASHE
Ga0222622_101331092	3300022756	Groundwater Sediment	MHAPNARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHKRTYKHPTDVHFQAAGTSSSDAAH
Ga0222622_102733241	3300022756	Groundwater Sediment	MHAPNARPHVDRYTPFKQEGWGIALLIVLLAVGSAAFATTMHKRTYKHPTDVHFQAAGHSSSGASH
Ga0222622_103576522	3300022756	Groundwater Sediment	MHDSSPPHVDRHIPYKQEGWGIALFVVLLAAASAGFATFVHKKTYLHPTDTHFHAAGTTQTTGSHE
Ga0207697_100121282	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLALASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE
Ga0207682_105109862	3300025893	Miscanthus Rhizosphere	MHDSSPPHVDRHIPYKQEGWGVALFIVLLAAASAGFATYVHKQTYLHPTDTHFHAAGTTQATGSHE
Ga0207645_100282754	3300025907	Miscanthus Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGHSSSGAAH
Ga0207650_102143981	3300025925	Switchgrass Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE
Ga0207701_102428292	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHAHNARPHVDRHIPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGQSSSGVAH
Ga0207644_100146472	3300025931	Switchgrass Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLAIASAAFATTVHKRTYKHPTDVHFQAAGESSSGASHE
Ga0207706_105141252	3300025933	Corn Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALLIVLLAIGSIAFATTVHKRTYKHPTDVHFQAAGTSSSDAAH
Ga0207669_104609491	3300025937	Miscanthus Rhizosphere	YIPFKQEGWGVALFIVLLAIASAAFATTVHKRTYKHPTDVHFQAAGESSSGASHE
Ga0207691_104262802	3300025940	Miscanthus Rhizosphere	MQDNAAPHVDRHIPFKQEGWGVALFIVLLALGSAAFATYVHKTTYKAPTDVHFRAAGSAATH
Ga0207689_108104921	3300025942	Miscanthus Rhizosphere	HVDRYIPFKQEGWGVALFIVLLALASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE
Ga0207661_101841461	3300025944	Corn Rhizosphere	LMHGPNTRPHVDRYVPFKQEGWGVALFIVLLAAASVAFATTVHRRTYKHPTDVRFQAAGTSSAGASHE
Ga0207679_100480135	3300025945	Corn Rhizosphere	RPHVARYVPFKQEGWGIALFIVLLALASATFATIVHKRTYLHPTDVHFQAAGASSTGASH
Ga0207679_101540911	3300025945	Corn Rhizosphere	MHDAKVRPHVARYVPFKQEGWGIALFIVLLALASATFATIVHKRTYLHPTDVHFQAAGASSTGASHE
Ga0207679_114445272	3300025945	Corn Rhizosphere	MSDVKTRPHVDRYVPFKQEGWGIALFVVFLAIASAAFATIVHKRTYLHPTDVHFQAAGASNTGASHE
Ga0207679_118855841	3300025945	Corn Rhizosphere	MQQNAAPHVDRHIPFKQEGWGIALFVVLLAVGSAAFATYVHKTTYKHPTDVRFRAAGSAAAHE
Ga0207668_109575271	3300025972	Switchgrass Rhizosphere	MHAPNARPHVDRHVPFKQEGWGVALFIVLLAIASIAFATTVHKRTYKHPTDVHFQAAGQSSSGVAH
Ga0207676_112019622	3300026095	Switchgrass Rhizosphere	MHGPNTRPHVDRYIPFKQEGWGVALFIVLLALASVAFATTVHKRTYKHPTDVHFQAAGE
Ga0207683_111518682	3300026121	Miscanthus Rhizosphere	CATEVALVITVLLGAFMHGPNTRPHVDRYVPFKQEGWGVALFIVLLAIASVAFATTVHKRTYKHPTDVHFQAAGESSSGASHE
Ga0207698_100496443	3300026142	Corn Rhizosphere	MHDTSNVTQPGRYVPFKQEGWGVALFIVLLAVASAATAAYIHHRTYHPPTDVRFQAAGSAGSRE
Ga0209818_11618251	3300027637	Agricultural Soil	MHDANARPHVDRYIPFKREGWGIALFIVVLAIASAAFATVVHKRTYKHPTDVHFQAAGSAAGGASHGAASASH
Ga0307297_100506372	3300028754	Soil	MHAPNARPHVDRHTPFKQEGWGIALLIVLLAVGSAAFATTMHKRTYKHPTDVHFQAAGHSSSGASH
Ga0307288_100953982	3300028778	Soil	MHGPNTRPHVDRYVPFKQEGWGIALLIVLLAAASVAFATTVHKRTYKHPTDVRFQ
Ga0247825_111153842	3300028812	Soil	MHAHNARPHVDRHIPFKQEGWGVALVIVLLAVASIAFATTVHKRTYKHPTDVHFQAAGRSSSGGSH
Ga0247826_105814352	3300030336	Soil	MHAPNARPHVDRHIPFKQEGWGVALFIVLLAAASVVFATTVHKRTYKHPTDVHFQAAGRSSSEGSH
Ga0268240_100192932	3300030496	Soil	MHDATPRPQVERYVPFKQEGWGIALFIVFLAIASAAFATIVHKRTYLHPTDVHFQAAGASSAGASHE
Ga0268240_100265452	3300030496	Soil	MHDAKTRPHVERYVPFKQEGWGIALFVVFLAVASATFATIVHKRTYLHPTDVHFQAAGASSTGASHE
Ga0307408_1013100542	3300031548	Rhizosphere	MHGNARSHVDRHIPFKREGWGIALFIVGLAVASAAFATVVHKRTYKHPTDVHFQAAGSAAGSASHGAAGAAH
Ga0307413_104857971	3300031824	Rhizosphere	MHDNSPAPHVDRHIPFKQEGWGIALLVVLLAVATAGWAGYVHKTTYKPPTDVHFRSAGSSSPAAAH
Ga0307410_120851302	3300031852	Rhizosphere	MHDSARPHVDRHIPFRQEGWGIALFIVLLAVGSAAFATVVHKRTYKHPTDVHFRAAGAASAGGGHGAASASH
Ga0307406_101378202	3300031901	Rhizosphere	MHDSARPHVDRHIPFRQEGWGITLFIVLLAVGSAAFATVVHKRTYKHPTDVHFRAAGAASAGGGHGAASASH
Ga0307406_117935902	3300031901	Rhizosphere	MHDNSPAPHVDRYIPFKQEGWGIALLVVLLAVATAGWAGYVHKTTYKPPTDVHFRSAGSSSPAAAH
Ga0308175_1000701271	3300031938	Soil	MHDSSATHVDRHIPFKQEGWGIALLVILLAAGFASWATYVHKTTYLHPTDVHFRAAGSATAHE
Ga0308175_1003375842	3300031938	Soil	MHDANVRPHVARYVPFKQEGWGIALFIVLLALGSATIATIVHKRTYLHPTDVHFQAAGASNTGASHE
Ga0308175_1004952643	3300031938	Soil	MHDSLPPHVDRYVPFKQEGWGIALFVVLLAAASAGFATYVHKKTYLHPTDTHFHAAGTTGSSASHD
Ga0308175_1005914772	3300031938	Soil	MHESPAPHVDRHVPFKQEGWGAALFIVLLAAAAAGWATYVHKTTYKPPTDVHFRAAGSATAHE
Ga0308174_100218352	3300031939	Soil	MHDTNVRPHADRHVPFKQEGWGVALFIVLLALGSVAFATVVHNRTYKHPTDVRFQAAGEATTGASHE
Ga0310885_106210741	3300031943	Soil	MHAHNARPHVDRHTPFKQEGWGIALVIVLLAVASAAFATTVHKRTYKHPTDVHFQAAGHSSSEASH
Ga0307409_1025530812	3300031995	Rhizosphere	MHGNARSHVDRHIPFKREGWGIALFIVGLAVASAAFATVVHKRTYRHPTDVHFQAAGAAA
Ga0308176_113099411	3300031996	Soil	MHDTNVRPHADRHVPFKQEGWGVALFIILLALGSVAFATVVHNRTYKHPTDVRFQAAGEATTGASHE
Ga0308176_115446002	3300031996	Soil	MHDAKVRPHVERYVPFKQEGWGIAAFIVLLALASAAFATIVHKRTYLHPTDVHFQAAGASTAGASHE
Ga0307416_1009496701	3300032002	Rhizosphere	MHAHNARPHVDRHTPFKQEGWGIALVIVLLAVASAAFATTVHKRTYKHPTDVHFQAAGHS
Ga0307416_1016246751	3300032002	Rhizosphere	MHGNARSHVDRHIPFKREGWGIALFIVGLAVASAAFATVVHKRTYKHPTDVHFQAAGSAAGSASHGSAGAAH
Ga0307416_1026853802	3300032002	Rhizosphere	MHVPNARPHVDRHIPFKQEGWGIALLIVLLAVASAAFATTVHKKTYKHPTDVHFQAAGQSSSGGSH
Ga0307416_1027652741	3300032002	Rhizosphere	RPHVDRHIPFRQEGWGIALFIVLLAVGSAAFATVVHKRTYKHPTDVHFRAAGAASAGGGHGAASASH
Ga0307411_118630212	3300032005	Rhizosphere	MHGNARSHVDRHIPFKREGWGIALFIVGLAVASAAFATVVHKRTYKQPTDVHFQAAGSAAGSASHGA
Ga0307411_123334001	3300032005	Rhizosphere	MHDNAHPHVDRHVPFKQEGWGIALFIVLLAVGSATFATVVHKRTYRAPTDVQMRAAGSST
Ga0308173_102100722	3300032074	Soil	MQQNAPPHVDRHIPFKQEGWGIALFIVLLAVGSAAFATYVHKTTYKHPTDVRFHAAGSASAHE
Ga0308173_108037752	3300032074	Soil	MHDANVRPQADRYVPFKQEGWGIALFIVLLAIASATFATVVHKRTYKHPTDVRFQAAGEATSGASHE
Ga0307415_1021918721	3300032126	Rhizosphere	ITVLRGALMHVSARPHVDRHIPFRQEGWGIALFIVLLAVGSAAFATVVHKRTYKHPTDVHFRAAGAASAGGGHGAASASH
Ga0247830_112056272	3300033551	Soil	MHAPNARPHVDRHIPFKQEGWGVALFIVLLAAASVVFATTVHKRTYKHPTDVHFQAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052436

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences