Metagenome / Metatranscriptome Family F052211

Basic Information
Family ID	F052211
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	45 residues
Representative Sequence	PVDCSAGEDVYHEQYATFHLAKGGPVGVTSNVTLTRSTMIKF
Number of Associated Samples	118
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.10 %
% of genes near scaffold ends (potentially truncated)	93.71 %
% of genes from short scaffolds (< 2000 bps)	93.71 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Most Common Taxonomy
Group	Bacteria (83.217 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.776 % of family members)
Environment Ontology (ENVO)	Unclassified (28.671 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.245 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.71% β-sheet: 0.00% Coil/Unstructured: 54.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF10049	DUF2283	6.29
PF00903	Glyoxalase	3.50
PF13531	SBP_bac_11	3.50
PF06707	DUF1194	2.80
PF01594	AI-2E_transport	2.10
PF00296	Bac_luciferase	1.40
PF01208	URO-D	1.40
PF00857	Isochorismatase	1.40
PF03404	Mo-co_dimer	0.70
PF09587	PGA_cap	0.70
PF13744	HTH_37	0.70
PF08924	DUF1906	0.70
PF04964	Flp_Fap	0.70
PF02656	DUF202	0.70
PF07298	NnrU	0.70
PF07690	MFS_1	0.70
PF05973	Gp49	0.70
PF11185	DUF2971	0.70
PF00171	Aldedh	0.70
PF13518	HTH_28	0.70
PF17137	DUF5110	0.70
PF13620	CarboxypepD_reg	0.70
PF01042	Ribonuc_L-PSP	0.70
PF06100	MCRA	0.70
PF07859	Abhydrolase_3	0.70
PF05598	DUF772	0.70
PF02423	OCD_Mu_crystall	0.70
PF12680	SnoaL_2	0.70
PF13410	GST_C_2	0.70
PF01794	Ferric_reduct	0.70
PF00501	AMP-binding	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.10
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	1.40
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.40
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.40
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.40
COG4716	Myosin-crossreactive antigen (function unknown)	Function unknown [S]	0.70
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.70
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.70
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.70
COG4094	Uncharacterized membrane protein	Function unknown [S]	0.70
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.70
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.70
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.70
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.70
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.70
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.70
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.22 %
Unclassified	root	N/A	16.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.37 %
Unclassified	root	N/A	16.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.99 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.70 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.98 %
Unclassified	root	N/A	16.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.59 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.59 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.10 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.70 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.70 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.70 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.10 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.70 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.70 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.70 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.70 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.70 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.70 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.10 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.40 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.70 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.70 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.70 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.70 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.70 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.10 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.40 %
Bradyrhizobium genosp. B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. B	1.40 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1.40 %
Lewinellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae	0.70 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.70 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.70 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.70 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.70 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.70 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.10 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.40 %
Bradyrhizobium genosp. B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. B	1.40 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1.40 %
Flavilitoribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter	0.70 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.70 %
Rhodopseudomonas palustris BisA53	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris BisA53	0.70 %
Pseudomonas sp. GW704-F3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW704-F3	0.70 %
Agrobacterium rhizogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes	0.70 %
Clostridium botulinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	0.70 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.10 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.40 %
Bradyrhizobium genosp. B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. B	1.40 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1.40 %
Flavilitoribacter nigricans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter → Flavilitoribacter nigricans	0.70 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.70 %
Rhodopseudomonas palustris BisA53	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris BisA53	0.70 %
Pseudomonas sp. GW704-F3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW704-F3	0.70 %
Agrobacterium rhizogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes	0.70 %
Clostridium botulinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	0.70 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.10 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.40 %
Bradyrhizobium genosp. B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. B	1.40 %
Mesorhizobium loti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1.40 %
Flavilitoribacter nigricans DSM 23189 = NBRC 102662	strain	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter → Flavilitoribacter nigricans → Flavilitoribacter nigricans DSM 23189 = NBRC 102662	0.70 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.70 %
Rhodopseudomonas palustris BisA53	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris BisA53	0.70 %
Pseudomonas sp. GW704-F3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW704-F3	0.70 %
Agrobacterium rhizogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes	0.70 %
Clostridium botulinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	0.70 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.70 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.70 %
uncultured bacterium BLR3	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10003544	All Organisms → cellular organisms → Bacteria → Proteobacteria	4520	Open in IMG/M
3300004091\|Ga0062387_101224985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300004092\|Ga0062389_101618341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	830	Open in IMG/M
3300004635\|Ga0062388_102741716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300005343\|Ga0070687_100537519	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005406\|Ga0070703_10552366	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005530\|Ga0070679_100357990	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300005533\|Ga0070734_10347397	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005610\|Ga0070763_10036665	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300005712\|Ga0070764_10324163	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005712\|Ga0070764_10482566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	743	Open in IMG/M
3300005712\|Ga0070764_10831183	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005712\|Ga0070764_10978944	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005764\|Ga0066903_103076604	Not Available	903	Open in IMG/M
3300005890\|Ga0075285_1038087	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300005921\|Ga0070766_10644902	Not Available	714	Open in IMG/M
3300005921\|Ga0070766_11192358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300006050\|Ga0075028_100296876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	900	Open in IMG/M
3300006059\|Ga0075017_101004087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	650	Open in IMG/M
3300006102\|Ga0075015_100766161	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006162\|Ga0075030_100668383	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300006163\|Ga0070715_11052409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	510	Open in IMG/M
3300006176\|Ga0070765_100200252	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300006176\|Ga0070765_100354281	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300006804\|Ga0079221_10479164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300007255\|Ga0099791_10090613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium rhizogenes	1400	Open in IMG/M
3300007788\|Ga0099795_10099905	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300009098\|Ga0105245_10353137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1457	Open in IMG/M
3300009521\|Ga0116222_1188344	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300009700\|Ga0116217_10107299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	1905	Open in IMG/M
3300009792\|Ga0126374_11390668	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010046\|Ga0126384_11625100	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300010159\|Ga0099796_10079415	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300010360\|Ga0126372_12197860	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300010361\|Ga0126378_11737732	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010362\|Ga0126377_13271293	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010373\|Ga0134128_10764061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1072	Open in IMG/M
3300010376\|Ga0126381_102668989	All Organisms → cellular organisms → Bacteria → Proteobacteria	714	Open in IMG/M
3300010376\|Ga0126381_103909314	Not Available	581	Open in IMG/M
3300010379\|Ga0136449_103890030	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300010379\|Ga0136449_104344015	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010400\|Ga0134122_11419093	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010859\|Ga0126352_1070742	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300011445\|Ga0137427_10416400	Not Available	558	Open in IMG/M
3300012361\|Ga0137360_11809671	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012469\|Ga0150984_100300768	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300012469\|Ga0150984_107127809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1446	Open in IMG/M
3300012685\|Ga0137397_10834317	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR3	684	Open in IMG/M
3300012922\|Ga0137394_10862216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300012924\|Ga0137413_11637463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012927\|Ga0137416_10770835	Not Available	849	Open in IMG/M
3300012929\|Ga0137404_11798667	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012930\|Ga0137407_10798512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300012948\|Ga0126375_11374376	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	597	Open in IMG/M
3300012971\|Ga0126369_10588640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1181	Open in IMG/M
3300013308\|Ga0157375_12415226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	627	Open in IMG/M
3300014158\|Ga0181521_10127977	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1500	Open in IMG/M
3300014164\|Ga0181532_10563437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300014489\|Ga0182018_10203438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris → Rhodopseudomonas palustris BisA53	1106	Open in IMG/M
3300016270\|Ga0182036_10069869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2285	Open in IMG/M
3300016270\|Ga0182036_10528939	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300016319\|Ga0182033_11538952	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300017924\|Ga0187820_1306361	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300017927\|Ga0187824_10137116	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300017933\|Ga0187801_10345253	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300017936\|Ga0187821_10094403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1099	Open in IMG/M
3300017936\|Ga0187821_10204218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300017943\|Ga0187819_10495344	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300017946\|Ga0187879_10073424	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300017955\|Ga0187817_10676231	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300017970\|Ga0187783_10444153	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300017970\|Ga0187783_11188451	Not Available	549	Open in IMG/M
3300018012\|Ga0187810_10475693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300018020\|Ga0187861_10432836	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300018058\|Ga0187766_10412452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	895	Open in IMG/M
3300018090\|Ga0187770_11174818	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300020581\|Ga0210399_10887443	Not Available	724	Open in IMG/M
3300020581\|Ga0210399_11585952	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300021171\|Ga0210405_10271414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1341	Open in IMG/M
3300021178\|Ga0210408_11004754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300021180\|Ga0210396_10442155	Not Available	1141	Open in IMG/M
3300021181\|Ga0210388_10567371	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300021402\|Ga0210385_11521136	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021404\|Ga0210389_10405658	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300021404\|Ga0210389_10667582	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300021404\|Ga0210389_11512338	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300021404\|Ga0210389_11532640	Not Available	506	Open in IMG/M
3300021407\|Ga0210383_10075235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti	2824	Open in IMG/M
3300021407\|Ga0210383_10549459	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300021407\|Ga0210383_10991402	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300021420\|Ga0210394_11252735	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter → Flavilitoribacter nigricans → Flavilitoribacter nigricans DSM 23189 = NBRC 102662	635	Open in IMG/M
3300021420\|Ga0210394_11623704	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300021433\|Ga0210391_10389182	Not Available	1094	Open in IMG/M
3300021474\|Ga0210390_10248190	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300021474\|Ga0210390_10735832	Not Available	820	Open in IMG/M
3300021476\|Ga0187846_10184168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300021476\|Ga0187846_10370313	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300021477\|Ga0210398_11220035	Not Available	594	Open in IMG/M
3300021478\|Ga0210402_11812356	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300021479\|Ga0210410_10099060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2573	Open in IMG/M
3300022522\|Ga0242659_1142299	Not Available	504	Open in IMG/M
3300022523\|Ga0242663_1125251	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300022557\|Ga0212123_10067268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	3115	Open in IMG/M
3300025500\|Ga0208686_1017857	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300025885\|Ga0207653_10102740	Not Available	1012	Open in IMG/M
3300025915\|Ga0207693_10398394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300025960\|Ga0207651_11169712	Not Available	690	Open in IMG/M
3300026359\|Ga0257163_1076343	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300026555\|Ga0179593_1238888	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300026557\|Ga0179587_10063317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2161	Open in IMG/M
3300027591\|Ga0209733_1049422	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300027625\|Ga0208044_1016087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2741	Open in IMG/M
3300027884\|Ga0209275_10180231	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300027903\|Ga0209488_10733833	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300027908\|Ga0209006_11298447	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300028047\|Ga0209526_10625272	Not Available	687	Open in IMG/M
3300028806\|Ga0302221_10326598	Not Available	669	Open in IMG/M
3300028906\|Ga0308309_10399625	Not Available	1178	Open in IMG/M
3300028906\|Ga0308309_10443732	Not Available	1117	Open in IMG/M
3300031236\|Ga0302324_102639815	Not Available	609	Open in IMG/M
3300031525\|Ga0302326_13174563	Not Available	556	Open in IMG/M
3300031595\|Ga0265313_10289813	Not Available	660	Open in IMG/M
3300031708\|Ga0310686_103174563	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031708\|Ga0310686_113157686	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031708\|Ga0310686_114494476	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300031715\|Ga0307476_10981913	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300031747\|Ga0318502_10712493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. B	607	Open in IMG/M
3300031751\|Ga0318494_10162174	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300031768\|Ga0318509_10408689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300031792\|Ga0318529_10334608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300031792\|Ga0318529_10401362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium genosp. B	638	Open in IMG/M
3300031797\|Ga0318550_10054800	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300031823\|Ga0307478_11230957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW704-F3	623	Open in IMG/M
3300031823\|Ga0307478_11784032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	506	Open in IMG/M
3300031835\|Ga0318517_10501124	Not Available	547	Open in IMG/M
3300031910\|Ga0306923_12411651	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031942\|Ga0310916_11073100	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300032052\|Ga0318506_10099860	Not Available	1239	Open in IMG/M
3300032076\|Ga0306924_12454194	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032160\|Ga0311301_11387605	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300032892\|Ga0335081_10578791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1391	Open in IMG/M
3300033158\|Ga0335077_11604834	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300034090\|Ga0326723_0423116	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.80%
Host-Associated	Host-Associated	4.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.42%
Aquatic	Environmental → Aquatic	15.38%
Plants	Host-Associated → Plants	4.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.22%
Freshwater	Environmental → Aquatic → Freshwater	11.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.20%
Sediment	Environmental → Aquatic → Sediment	3.50%
Peat	Environmental → Terrestrial → Peat	2.80%
Cave	Environmental → Terrestrial → Cave	1.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.24%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.19%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.70%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.10%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.40%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.70%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.70%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052211

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_100035444	3300002914	Grasslands Soil	VIVPVDCSAGEDVYREQYATYHLGGGGPAVITNNITLTRSSMIKF*
Ga0062387_1012249853	3300004091	Bog Forest Soil	VPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIRFL*
Ga0062389_1016183413	3300004092	Bog Forest Soil	IVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKF*
Ga0062388_1027417161	3300004635	Bog Forest Soil	DCSAGEDVYHEQYAAFHLAKGGPVGVTSNVTLTRSTMIKF*
Ga0070687_1005375191	3300005343	Switchgrass Rhizosphere	PVDCSAGDSPYHEQYAAFHLAKGGPVAVTSNVTLTRSTMVKF*
Ga0070703_105523661	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	PVDCSAGESIYNEQYAAFHLTKGGPVGVTSNVTATRSTMIKY*
Ga0070679_1003579901	3300005530	Corn Rhizosphere	QRGYKVIVPVDCSAGEDVYNEQYATYHLAKSGPTYLTSVVTLTRSTMIKY*
Ga0070734_103473973	3300005533	Surface Soil	YKVIVPVDCSAGEDEYHEQYAAYHLAKGSWVGVTSNVTLTRSTMMKY*
Ga0070763_100366655	3300005610	Soil	QEAVQRGYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSTMVRFLGP*
Ga0070764_103241631	3300005712	Soil	VQRGYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIKF*
Ga0070764_104825662	3300005712	Soil	AQEAVQRGYKVIVPVDCSAGEDVYHEQYATFQLAKGGPVGITSNVTLTRSGMIKFQGP*
Ga0070764_108311831	3300005712	Soil	QEAVQRGYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNITLTRSTMIRFLSP*
Ga0070764_109789441	3300005712	Soil	QEAVQRGYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIKF*
Ga0066903_1030766041	3300005764	Tropical Forest Soil	DCSAGEDVYNEQYAAYHLAKGGPAVVTSKVKMTRSPMVKFGS*
Ga0075285_10380871	3300005890	Rice Paddy Soil	AQRGYKVILPVDCSAGEAVYNEQYAAFHLTKGGPVGVTSNVTATRSTMIKYQ*
Ga0070766_106449022	3300005921	Soil	GEDVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIKF*
Ga0070766_111923581	3300005921	Soil	SAGEDEYHEQYAAFHLAKGGPVVVTDKVTLTRSTMIKF*
Ga0075028_1002968762	3300006050	Watersheds	PVDCSAAESVYNEQYAAFHLAKGGPVGVTGQVTLTRSTMIKF*
Ga0075017_1010040871	3300006059	Watersheds	YKVIVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSSMIKF*
Ga0075015_1007661611	3300006102	Watersheds	DCSAGEDVYHEQYAAFHLAKGGPAGVTSNVTLTRSTMIKF*
Ga0075030_1006683832	3300006162	Watersheds	LRIPGLAAAVPVDCSAGEDVYHEQYAAFQLAKGGPLGITSNVTLTRSMMIKF*
Ga0070715_110524091	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PVDCSAGEDVYHEQYATFHLAKGGPVGVTSNVTLTRSTMIKF*
Ga0070765_1002002521	3300006176	Soil	GYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKFQGP*
Ga0070765_1003542814	3300006176	Soil	VGTSQEAVQRGYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIKF*
Ga0079221_104791641	3300006804	Agricultural Soil	VDCSAGEDEFHELYATYHLAKGGPANLTSNVTVTRTTMIKF*
Ga0099791_100906133	3300007255	Vadose Zone Soil	AGEDVYREQYATYHLGGGGPAVITNNITLTRSSMIKF*
Ga0099795_100999051	3300007788	Vadose Zone Soil	YKVIVPVDCSAAEDVYHEQYAAFHLAKGGPAGVTSNVTMTRSSMIKF*
Ga0105245_103531371	3300009098	Miscanthus Rhizosphere	VDCSAGDSPYHEQYAAFHLAKGGPVAVTSNVTLTRSTMVKF*
Ga0116222_11883441	3300009521	Peatlands Soil	DCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIRFLSP*
Ga0116217_101072995	3300009700	Peatlands Soil	EDVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIRFLSP*
Ga0126374_113906681	3300009792	Tropical Forest Soil	QRGYKVIVPVDCSAGEDVYHEQYAAFHLAKGGPAGVTSNVTITRSTMMKF*
Ga0126384_116251001	3300010046	Tropical Forest Soil	YQVIVPVDCSAAEDGYREQYAMFHLAKGGPVIVTSKLTTTRSTMVKF*
Ga0099796_100794152	3300010159	Vadose Zone Soil	DCSAGEDAYHEQYAAFHLAKGGPAGVTSNVTMTRTTMVKF*
Ga0126372_121978601	3300010360	Tropical Forest Soil	AQRGYKVIVPVDCSAGEDVYHEQYAAFHLAKGGPAGVTSNVTMTRSTMMKF*
Ga0126378_117377321	3300010361	Tropical Forest Soil	GEDVYHEQYAAFHLAKGGPAGITSNVTMTRSTMIKF*
Ga0126377_132712932	3300010362	Tropical Forest Soil	PVDCSAGESVYNEQYAAFHLTKGGPAGVTSNVTATRSTMIKY*
Ga0134128_107640611	3300010373	Terrestrial Soil	VIVPVDCSAGEDVYNEQYATYHLAKSGPTYLTSVVTLTRSTMIKY*
Ga0126381_1026689891	3300010376	Tropical Forest Soil	GYKIIVPVDCSAGEDEYHEQYAAFHLAKGSWVGVTSNVTLTRSSMIKF*
Ga0126381_1039093141	3300010376	Tropical Forest Soil	GEDEYHEQYAAFHLAKGSWAGVTNNVTLTRSTMIKF*
Ga0136449_1038900301	3300010379	Peatlands Soil	RGYKVIVPVDCSAGEDEYHEQYAAYHLAVGSWVGVTSNVTLTRAAMMKF*
Ga0136449_1043440151	3300010379	Peatlands Soil	DCSAGETVYHEQYAAFHLAKGGPVGITSNVTLTRSTMIKF*
Ga0134122_114190931	3300010400	Terrestrial Soil	VIIPVDCSAGDSPYHEQYAAFHLAKGGPVAVTSNVTLTRSTMVKF*
Ga0126352_10707422	3300010859	Boreal Forest Soil	VPVDCSAGEDEYHEQYAAFHLAKGSWVGVTSNVTLTRSAMMKF*
Ga0137427_104164002	3300011445	Soil	SIYNEQYAAFHLTKGGPVGVTSNVTATRSTMIKY*
Ga0137360_118096711	3300012361	Vadose Zone Soil	KVIVPVDCSAGEDVYHEQYAAFHLAKGGPAGVTNNVTMTRSTLIKF*
Ga0150984_1003007681	3300012469	Avena Fatua Rhizosphere	EDMYNEQYATYHLAKGGPAIITSAVTMTRSAMIKF*
Ga0150984_1071278091	3300012469	Avena Fatua Rhizosphere	IVPVDCSAGEDEYHEQYATFHLAKVSWVGVTSNVTLTRSTMIKF*
Ga0137397_108343172	3300012685	Vadose Zone Soil	DCSAGEDVYHEQYAAFHLAKGGPAGVTSNVTMTRTTMIKF*
Ga0137394_108622161	3300012922	Vadose Zone Soil	VVVPVDCSAGEDIYNEQYATYHLAKGGPAIITSAVTMTRSAMIKF*
Ga0137413_116374631	3300012924	Vadose Zone Soil	DCSAGEDAYHEQYAAFHLAKGGPVGVTSNVTMTRTTMIKF*
Ga0137416_107708352	3300012927	Vadose Zone Soil	AAEGVYNEQYAAFHLAKGGPVGVTSQVTLTRSTMIKF*
Ga0137404_117986671	3300012929	Vadose Zone Soil	AGEDAYHEQYAAFHLAKGGPAGVTSNVTMTRTTMVKF*
Ga0137407_107985122	3300012930	Vadose Zone Soil	SAGEDIYREQYATFHLTKGGPAIVTSKVTTTRSTMIKF*
Ga0126375_113743761	3300012948	Tropical Forest Soil	VILPVDCSAGEAIYNEQYAAFHLTKGGPVGVTSNVTATRSTMIKYQ*
Ga0126369_105886402	3300012971	Tropical Forest Soil	YKVIVPVDCSAGEDVYHEQYAAFHLAKGGPAGVTSNVTMTRSTMIKF*
Ga0157375_124152263	3300013308	Miscanthus Rhizosphere	DCSAGEDEYHEQYATFHLAKGSWVGVTSNVTLTRSTMIKF*
Ga0181521_101279771	3300014158	Bog	AQRGYKVIVPVDCSAGEDAYRERYAAFHLAKGGPAQVTGNVTLTRSTMIKF*
Ga0181532_105634372	3300014164	Bog	VRRSAATKVIVPVDCSAGETVYHEQYAAFHLAKGGPVGITSNITLTRSTMIKFQGP*
Ga0182018_102034383	3300014489	Palsa	DCSAGDSVYNEQYAAFQLTKGGPAGITSNVTLTRTSMVKF*
Ga0182036_100698695	3300016270	Soil	YKIILPVDCSAGENEYQEQYATYHLTKGSWVGVTSNVTPTRSTMVKF
Ga0182036_105289391	3300016270	Soil	PVDCSAGEDEYHEQYAVFHLAKGSWVGVTSNVTITRSAMIKF
Ga0182033_115389521	3300016319	Soil	GEDEYHEQYAAFHLAKGSWAGVTSNVTLTRSTMMKF
Ga0187820_13063611	3300017924	Freshwater Sediment	SAGEDVYHEQYATFHLAKGGPAGITGNVTMTRSTMIKF
Ga0187824_101371161	3300017927	Freshwater Sediment	IIPVDCSAAEDEYHEQYAAFHLGKGGPVNVTSATTLTRTTMIKF
Ga0187801_103452531	3300017933	Freshwater Sediment	EDTYMEQYAAFHLFKGGPAGVTSQVTVTRSSMMKF
Ga0187821_100944032	3300017936	Freshwater Sediment	VPVDCSAGRSAYREQYVAYELGVGGPDPVTSNVTLTRTTMLKFK
Ga0187821_102042182	3300017936	Freshwater Sediment	LPVDCSAAENEFHEQYATYHLAKGGPVNVTSATTITRTTMIKF
Ga0187819_104953441	3300017943	Freshwater Sediment	CLSSEDTYMEQYAAFHLFKAGPNVVTSQVTMTRSTMVKF
Ga0187879_100734241	3300017946	Peatland	KVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIRFLSP
Ga0187817_106762311	3300017955	Freshwater Sediment	LSSEDTYMEQYAAFHLFKAGPNVVTSQVTMTRSTMVKF
Ga0187783_104441531	3300017970	Tropical Peatland	VIVPVDCSAGEDVYHEQYAAFDLAKGGPAGVTQNVTLTRSTMMKF
Ga0187783_111884511	3300017970	Tropical Peatland	VQRGYKVVFPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSSMMKF
Ga0187810_104756931	3300018012	Freshwater Sediment	CLSSEDTYMEQYAAFHLFKGGPAGVTSQVTVTRSSMMKF
Ga0187861_104328361	3300018020	Peatland	FKVIVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIRFLSP
Ga0187766_104124521	3300018058	Tropical Peatland	VDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRAAMIKF
Ga0187770_111748181	3300018090	Tropical Peatland	IVPVDCSAGESVYNEQYAAFHLAKGGPVGVTSNVTLTRTGMIKF
Ga0210399_108874432	3300020581	Soil	YKVVVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKFLSP
Ga0210399_115859522	3300020581	Soil	TSQEAVQRGYKVIVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSGMIKF
Ga0210405_102714141	3300021171	Soil	RGYKIIVPVDCSAGEDEYHEQYAAYHLAKGSWVGVTSNVTLTRSTMIKY
Ga0210408_110047542	3300021178	Soil	DCSAGEDEYHEQYAAFHLAKGGPTIVTDKVTLTRSTMIKF
Ga0210396_104421552	3300021180	Soil	VIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAIIRFLSP
Ga0210388_105673711	3300021181	Soil	EASQRGYKVIVPVDCSAGESVYHEQYAAFHLAKGGPVNMTNNVTLTRTTMIKF
Ga0210385_115211361	3300021402	Soil	IVPVDCSAGETVYHEQYAAFHLAKGGPVGITSNITLTRSTMIKF
Ga0210389_104056581	3300021404	Soil	ETVYHEQYAAFHLAKGGPVGITSNVTLTRSTMIKF
Ga0210389_106675821	3300021404	Soil	EDVYHEQYAAFQLAKGGPVGITSNVTLTRSSMIKF
Ga0210389_115123381	3300021404	Soil	VIVPVDCSAGEDAYHEQYAAFHLAKGGPVIVTGQVTLTRSAMIKF
Ga0210389_115326402	3300021404	Soil	REDVYHEQYAAFQLAKGGPVGITSNVTLTRSGMIKF
Ga0210383_100752351	3300021407	Soil	IVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKFQGP
Ga0210383_105494593	3300021407	Soil	QRGYKVIVPVDCSAGETVYHEQYAAFHLAKGGPVGITSNVTLTRSTMIKF
Ga0210383_109914022	3300021407	Soil	AGEDVYNEQYAAIHLAKGGPVGVTSNVTMTRSTMIKF
Ga0210394_112527352	3300021420	Soil	LRILAWLAADPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRCTMIKF
Ga0210394_116237042	3300021420	Soil	YKVIVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIKF
Ga0210391_103891823	3300021433	Soil	GYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKFQGP
Ga0210390_102481904	3300021474	Soil	TSQEAVQRGYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKFQGP
Ga0210390_107358321	3300021474	Soil	DCSAGESVYHEQYAAFHLAKGGPVNMTNNITLTRTTMLKF
Ga0187846_101841681	3300021476	Biofilm	AEDVYHEQYAAFHLAKGGPVGVTGNVTMTRSNMIKF
Ga0187846_103703131	3300021476	Biofilm	VPVDCSAGEDEYHEQYAVFHLAKGSWVGVTSNVTITRSAMIKF
Ga0210398_112200351	3300021477	Soil	VDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIRFLSP
Ga0210402_118123562	3300021478	Soil	YKVIVPVEAEDVYHEQYAAFHLAKGGPVGVTNNVTMTRSTMIKF
Ga0210410_100990603	3300021479	Soil	VVPVDCSAGEDEYHEQYAAFHLAKGGPTIVTDKVTLTRSTMIKF
Ga0242659_11422992	3300022522	Soil	GEDEYHEQYAAFHLAKGGPVQVTSQVTLTRSAMIKF
Ga0242663_11252512	3300022523	Soil	VIIPVDCSAGENVYNEQYAAFHLAKGGPVGVTGNVTMTRSTMIKF
Ga0212123_100672681	3300022557	Iron-Sulfur Acid Spring	GYKVIVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSSMIRFLSQ
Ga0208686_10178575	3300025500	Peatland	AGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIRFLSP
Ga0207653_101027402	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	PVDCSAGESIYNEQYAAFHLTKGGPVGVTSNVTATRSTMIKY
Ga0207693_103983941	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GYKVIIPVDCSAAEDEYHEQYAAFHLGKGGPVNVTSATTLTRTTMVKF
Ga0207651_111697122	3300025960	Switchgrass Rhizosphere	SAGEDAYHEQYAAFHLAKGGPVGVTSNVTMTRSTMIKF
Ga0257163_10763431	3300026359	Soil	DCSAAEDVYHEQYAAFHLAKGGPAGVTSNVTMTRSSMIKF
Ga0179593_12388886	3300026555	Vadose Zone Soil	VIVPVDCSAGEDVYREQYATYHLGGGGPAVITNNITLTRSSMIKF
Ga0179587_100633171	3300026557	Vadose Zone Soil	PVDCSASEDVYREQYATYHLGSGGPASITRNITLTRSSMIKF
Ga0209733_10494221	3300027591	Forest Soil	GYKVIIPVDCSAAESVYNEQYATFHLAKGGPVGVTSQVTLTRSAMIKF
Ga0208044_10160877	3300027625	Peatlands Soil	GFKVIVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIRFLSP
Ga0209275_101802311	3300027884	Soil	RGYKVIVPVDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKF
Ga0209488_107338331	3300027903	Vadose Zone Soil	VDCSAGEDVYNEQYATWHLAKGGPQGVTSNVTLTRTTMVKFQ
Ga0209006_112984471	3300027908	Forest Soil	GTASGAAQRDYKVIIPVDCSAAEDVYHEQYAAFHLAKGGPLQVTNQVTNSFTNTPSK
Ga0209526_106252722	3300028047	Forest Soil	TVGTSQEAVQRGYKVIVPVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKFQGP
Ga0302221_103265982	3300028806	Palsa	GTSQEAVQRGFKVIVPVDCSAGDSVYSEQYAAFQLTKGGPVPITSNVTLTRSTMVKF
Ga0308309_103996251	3300028906	Soil	PVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSAMIKFQGP
Ga0308309_104437321	3300028906	Soil	PVDCSAGETVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIKF
Ga0302324_1026398151	3300031236	Palsa	FKVIVPVDCSAGDSVYSEQYAAFQLTKGGPVPITSNVTLTRSTMVKF
Ga0302326_131745632	3300031525	Palsa	QESVQRGYKVIVPVDCSAGESVYHEQYAAFQLAKGGPVSITANVTLTRTTMVKF
Ga0265313_102898133	3300031595	Rhizosphere	VIVPIDCSAGESVYHEQYAAFQLAKGGPVGITSNVTLTRSTMIKFLSP
Ga0310686_1031745632	3300031708	Soil	YKVIVPVDCSAGEDVYHEQYAAFQLAKGGPTGITSNVTLTRTTMVKF
Ga0310686_1131576862	3300031708	Soil	MCGNSFQGATVGTAQGSGEAVQRGYKVIVPMDCSAGEDVYHEQYAAFQLAKGGPVGITSNVTLTRTGVVKF
Ga0310686_1144944762	3300031708	Soil	VIIPVDCSEGEEVDHEQYAAFQLAKGGLIGITRNVTLRRTTMVKF
Ga0307476_109819133	3300031715	Hardwood Forest Soil	EDVYHEQYAAFHLAKGGPAGITSNVTMTRSTMIKF
Ga0318502_107124931	3300031747	Soil	IILPVDCSAGENEYQEQYATYHLTKGSWVGVTSNVTPTRSTMVKF
Ga0318494_101621741	3300031751	Soil	SAGENEYQEQYATYHLTKGSWVGVTSNVTPTRSTMVKF
Ga0318509_104086891	3300031768	Soil	QRGYKVIVPVDCSAGEDEYHEQYAAFHLAKGGPVGVTGNVTMTRSTMIKF
Ga0318529_103346081	3300031792	Soil	VIVPVDCSAAEDVYHEQYAAFHLAKGGPVGVTNNVTMTRSTMIKF
Ga0318529_104013622	3300031792	Soil	ILPVDCSAGENEYQEQYATYHLTKGSWVGVTSNVTPTRSTMVKF
Ga0318550_100548001	3300031797	Soil	AQRGYKIILPVDCSAGENEYQEQYATYHLTKGSWVGVTSNVTPTRSTMVKF
Ga0307478_112309572	3300031823	Hardwood Forest Soil	VQRGYKVIVPVDCPAGDSVYHEQCAAFQLAKGGPVGITANVTLTRTTMVKF
Ga0307478_117840321	3300031823	Hardwood Forest Soil	CSAGEDEYHEQYAAFHLAKGSWAGVTMNVTLTRSTMMKF
Ga0318517_105011241	3300031835	Soil	DVYNEQYAAYHLAKGGPAVVTSKVKMTRSPMVKFGS
Ga0306923_124116511	3300031910	Soil	VDCSAGEDVYHEQYAAFHLAKGGPAGVTMNVTMTRTTMIKFQ
Ga0310916_110731001	3300031942	Soil	GEDVYHEQYAAFHLAKGGPAGVTMNVTMTRTTMIKFQ
Ga0318506_100998603	3300032052	Soil	AEDVYHEQYAAFHLAKGGPVGVTNNVTMTRSTMIKF
Ga0306924_124541941	3300032076	Soil	IVPVDCSAGEDVYNEQYAAYHLAKGGPAVVTNKVTMTRSSMVKFGA
Ga0311301_113876051	3300032160	Peatlands Soil	AQRGYKVIIPVDCSAGENVYNEQYAAFHLAKGGPVAVTGNVTMTRSTMIKF
Ga0335081_105787912	3300032892	Soil	VIVPVDCSAGEDEYHEQYAAFHLAKGGPAGVTNNVTLTRSTMIKF
Ga0335077_116048341	3300033158	Soil	GYKVIVPVDCSAGEDVYHEQYAAFHLAKGGPAGITSNVTMTRSTMLKF
Ga0326723_0423116_1_132	3300034090	Peat Soil	VPVDCSAGEDAYHEQYAAFHLAKGGPAGVTSNVTMTRSTMIKF

Hidden Markov Model


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