Metagenome / Metatranscriptome Family F052188

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Overview

Basic Information
Family ID	F052188
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	98 residues
Representative Sequence	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLVSLSGNNFTPIT
Number of Associated Samples	122
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.29 %
% of genes near scaffold ends (potentially truncated)	91.61 %
% of genes from short scaffolds (< 2000 bps)	99.30 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (65.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (35.664 % of family members)
Environment Ontology (ENVO)	Unclassified (76.224 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (87.413 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128. 1SI36aug09_100mDRAFT_10414461 2JGI20160J14292_101471251 3JGI20159J14440_101128853 4JGI20158J14315_101467453 5GOS2266_10389302 6GOS2216_100243611 7GOS2216_100637774 8GOS2216_100751831 9GOScombined01_1014377951 10GOScombined01_1042285651 11NAP4_11284152 12JGI26381J51731_10947843 13JGI26273J51734_100978421 14Ga0008648_101572073 15Ga0066866_102584501 16Ga0066861_101764871 17Ga0066865_103626343 18Ga0066865_103921182 19Ga0066377_102092523 20Ga0066370_102240201 21Ga0066370_103132133 22Ga0066836_109858251 23Ga0075446_101127181 24Ga0075446_101891763 25Ga0068495_16131113 26Ga0075444_101766503 27Ga0101667_10645233 28Ga0101671_10425461 29Ga0163111_102516674 30Ga0163111_120749411 31Ga0182063_13985982 32Ga0181428_10582431 33Ga0181397_11786673 34Ga0181382_11438981 35Ga0181382_11938082 36Ga0181410_11638461 37Ga0181413_12299452 38Ga0181423_13309862 39Ga0181380_13012832 40Ga0181379_12417771 41Ga0181565_107327361 42Ga0181569_110488531 43Ga0181559_107735132 44Ga0181568_113822793 45Ga0181564_105020413 46Ga0211492_10983681 47Ga0211534_10293683 48Ga0211619_10444531 49Ga0211520_10703822 50Ga0211517_10571402 51Ga0211593_10738883 52Ga0211508_11022681 53Ga0211674_101589011 54Ga0211682_101020933 55Ga0211682_102754671 56Ga0211590_102199933 57Ga0211678_103380221 58Ga0211636_102707391 59Ga0211499_103332602 60Ga0211532_104141022 61Ga0211659_104900931 62Ga0211496_103132171 63Ga0211575_103108163 64Ga0211651_102802433 65Ga0211702_101775131 66Ga0211521_101904981 67Ga0211622_104479032 68Ga0211565_105171531 69Ga0211708_100113841 70Ga0211708_103037871 71Ga0211708_103284463 72Ga0211708_103413563 73Ga0211539_103023491 74Ga0211576_104484191 75Ga0211558_103213841 76Ga0211558_105290183 77Ga0211559_103706851 78Ga0211564_104220191 79Ga0211638_101574281 80Ga0211473_103901811 81Ga0211473_106828033 82Ga0211548_105837832 83Ga0211664_101752973 84Ga0211551_106171691 85Ga0211643_103886401 86Ga0211535_103062231 87Ga0211676_105200963 88Ga0211640_102797422 89Ga0211640_106318091 90Ga0211714_104832383 91Ga0211547_104269493 92Ga0211541_103880723 93Ga0211503_104064853 94Ga0213862_103225011 95Ga0206681_102655533 96Ga0224906_11232232 97Ga0222652_10591182 98Ga0233432_103116263 99Ga0255743_104248721 100Ga0255759_105914901 101Ga0228636_11164691 102Ga0228658_11703632 103Ga0228670_11088613 104Ga0209494_11875041 105Ga0209505_11843632 106Ga0209715_10849053 107Ga0209362_12439123 108Ga0209832_11465791 109Ga0209308_103857521 110Ga0209308_104062551 111Ga0209630_103351671 112Ga0208624_11206861 113Ga0208959_10267143 114Ga0208963_10567341 115Ga0208437_11407603 116Ga0209710_11955913 117Ga0209710_12484663 118Ga0209036_11084181 119Ga0209192_102729781 120Ga0209709_102624351 121Ga0209502_102032933 122Ga0209502_104318651 123Ga0209830_101964621 124Ga0209091_102957623 125Ga0233397_11486681 126Ga0257114_11915963 127Ga0257110_11618643 128Ga0308022_12166291 129Ga0308025_12926291 130Ga0307488_107834673 131Ga0307488_108331501 132Ga0308007_102371672 133Ga0308004_103372923 134Ga0307986_104398341 135Ga0302122_102795971 136Ga0308013_102775953 137Ga0308013_102971141 138Ga0315332_109566903 139Ga0315331_111933191 140Ga0315316_107508291 141Ga0315316_115930651 142Ga0315315_110617991 143Ga0310345_123060522
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128. 1SI36aug09_100mDRAFT_10414461 2GOS2266_10389302 3GOS2216_100243611 4GOS2216_100637774 5GOS2216_100751831 6GOScombined01_1014377951 7JGI26381J51731_10947843 8Ga0066866_102584501 9Ga0066861_101764871 10Ga0066865_103921182 11Ga0066377_102092523 12Ga0066370_102240201 13Ga0066836_109858251 14Ga0163111_120749411 15Ga0181397_11786673 16Ga0181382_11438981 17Ga0181410_11638461 18Ga0181380_13012832 19Ga0211517_10571402 20Ga0211593_10738883 21Ga0211674_101589011 22Ga0211682_101020933 23Ga0211590_102199933 24Ga0211532_104141022 25Ga0211575_103108163 26Ga0211539_103023491 27Ga0211473_103901811 28Ga0211548_105837832 29Ga0211551_106171691 30Ga0211535_103062231 31Ga0211676_105200963 32Ga0211640_102797422 33Ga0211640_106318091 34Ga0213862_103225011 35Ga0206681_102655533 36Ga0209036_11084181 37Ga0209709_102624351 38Ga0209830_101964621 39Ga0209091_102957623 40Ga0308022_12166291 41Ga0315315_110617991
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100. 1Ga0307488_108331501 2GOS2266_10389302 3GOS2216_100243611 4GOS2216_100751831 5GOScombined01_1042285651 6JGI26381J51731_10947843 7Ga0066866_102584501 8Ga0066861_101764871 9Ga0066865_103626343 10Ga0066836_109858251 11Ga0163111_102516674 12Ga0163111_120749411 13Ga0181397_11786673 14Ga0181382_11438981 15Ga0181410_11638461 16Ga0181380_13012832 17Ga0211520_10703822 18Ga0211593_10738883 19Ga0211674_101589011 20Ga0211682_101020933 21Ga0211682_102754671 22Ga0211590_102199933 23Ga0211678_103380221 24Ga0211636_102707391 25Ga0211499_103332602 26Ga0211532_104141022 27Ga0211651_102802433 28Ga0211702_101775131 29Ga0211622_104479032 30Ga0211565_105171531 31Ga0211708_103284463 32Ga0211539_103023491 33Ga0211564_104220191 34Ga0211638_101574281 35Ga0211548_105837832 36Ga0211664_101752973 37Ga0211551_106171691 38Ga0211643_103886401 39Ga0211535_103062231 40Ga0211676_105200963 41Ga0211640_102797422 42Ga0211640_106318091 43Ga0211547_104269493 44Ga0206681_102655533 45Ga0224906_11232232 46Ga0255743_104248721 47Ga0209505_11843632 48Ga0209715_10849053 49Ga0209630_103351671 50Ga0209036_11084181 51Ga0209709_102624351 52Ga0308025_12926291 53Ga0302122_102795971 54Ga0308013_102775953 55Ga0315332_109566903 56Ga0310345_123060522
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.94% β-sheet: 0.00% Coil/Unstructured: 48.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF09699	Paired_CXXCH_1	2.80
PF00892	EamA	2.80
PF12525	DUF3726	1.40
PF12804	NTP_transf_3	0.70
PF08484	Methyltransf_14	0.70
PF00731	AIRC	0.70
PF08669	GCV_T_C	0.70
PF13578	Methyltransf_24	0.70
PF08547	CIA30	0.70

Showing 1 to 9 of 9 entries

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.03 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.34 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	55.94 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	55.94 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	55.24 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	23.08 %
Unclassified	root	N/A	34.27 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300023109\|Ga0233432_10311626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	722	Open in IMG/M
3300000238\|SI36aug09_100mDRAFT_1041446	Not Available	532	Open in IMG/M
3300001349\|JGI20160J14292_10147125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	744	Open in IMG/M
3300001353\|JGI20159J14440_10112885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	839	Open in IMG/M
3300001355\|JGI20158J14315_10146745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	727	Open in IMG/M
3300001956\|GOS2266_1038930	Not Available	1622	Open in IMG/M
3300001972\|GOS2216_10024361	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300001972\|GOS2216_10063777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1773	Open in IMG/M
3300001972\|GOS2216_10075183	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300002040\|GOScombined01_101437795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	848	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.30%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.70%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	4.90%
Inlet	Environmental → Aquatic → Marine → Inlet	1.40%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.48%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.50%
Oceanic	Environmental → Aquatic → Marine → Oceanic	18.88%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.50%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.70%
Strait	Environmental → Aquatic → Marine → Strait	6.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified	41.26%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.40%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.70%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.10%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	41.26%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	16.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.19%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.99%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.50%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.50%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.70%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.70%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	35.66%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	15.38%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	6.99%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.70%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.70%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.70%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.50%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.80%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.40%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.59%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.99%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.20%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.50%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.70%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.70%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.40%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.70%
Volcanic Co2 Seeps	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seeps	0.70%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000238	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 100m	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001956	Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051	Environmental	Open in IMG/M
3300001972	Marine microbial communities from the Sargasso Sea - GS000d	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300003474	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4	Environmental	Open in IMG/M
3300003618	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI36aug09_100mDRAFT_10414461	3300000238	Marine	MGRAFILLITNDIERKAIIKKAKKTIPKDLKLDFRFKTCFVEMINPANIQNVKNIIGIIKSGVTAKNLKSPGAANPTAVNTFLNETLVSLSGNN
JGI20160J14292_101471251	3300001349	Pelagic Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFL
JGI20159J14440_101128853	3300001353	Pelagic Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFLNETFVSLSG
JGI20158J14315_101467453	3300001355	Pelagic Marine	LLIGKAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVKNIIGIIKSGVTAKNLKSPGAANPTAVKTFLNETLVSLSGNNF
GOS2266_10389302	3300001956	Marine	VLIGIAFNLLITNEIDKNAIIKNDKKTIPNDFKFDFKFKICLVAIINEAKIQN*VRKIIKSTNSGVTAKNLISPGACAYPTAIRTLLNGIFLSL
GOS2216_100243611	3300001972	Marine	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNVRKIIGIIKSGVTAKNLNKPGAAKPTAVRTFLNDTLVCLSGKKFNTYYK
GOS2216_100637774	3300001972	Marine	MDKKAIIKNDKSTIPKDLKLDFKLNICLVEIIKPAKIQNWVRKIIGIIKSGVTAKNLNKPGACAKPTAVKTFLKETFVCLSGNNLTP
GOS2216_100751831	3300001972	Marine	MTKEIDKNAIIKKDKKTIPNALKLDFRLRTCFVAIISDAKIQNVKNIIGITKSGVTAKNLNKPGAAYPTATSTFLNVTLVSLSENSLTPTYINKN*PNKPS
GOScombined01_1014377951	3300002040	Marine	MNVIDKKAIIRKDKNTIPNDFKLDFKFKICLVDIIRDAKIQNVRKIIGRTKSGVTAKNLIKPGATYPTAIKIFLNGTLLPL
GOScombined01_1042285651	3300002040	Marine	MFILLITNEIDKNAIIKKDKSTIPKDLKLDFKLNICLVEIIKPAKIQNWVRKIIGIIKSGVTAKNLNKPGACANPTAVKTFLKETLVCLSGNSLTP
NAP4_11284152	3300003474	Estuarine	MFILLITKVIDRKAIIKKDNNTIPKDLKLDFKFKISFVEMIKPAKIQNVRKIIGIIKSGVTAKNLNKPGAAKPTAVRTFLNDTLVCLSGKSLTPITKIKIAHINQVT
JGI26381J51731_10947843	3300003618	Marine	MGSIFILLITKEIDKNAIIKNDKNTIPKDLILDFKPSTCFVEIINPAKIQNCVRNIIGIIIFGVTAKNLNKPGA*AKPTAVNTFLKGTFVCLSGKSLTPITYIKIAQ
JGI26273J51734_100978421	3300003620	Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEIINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFLN
Ga0008648_101572073	3300004110	Marine	MGSIFILLITKEIDKNAIIKNDKNTIPKDLILDFKPSTCFVEIINPAKIQNCVRNIIGIIIFGVTAKNLNKPGA*AKPTAVNTFLKGTFVCL
Ga0066866_102584501	3300005514	Marine	MTKDIDKKAIIKNDKNTTPKDLKFDLRFNICFVDIIRAAKIQNCVRKIIGIIKSGVIAKNLNRPGA*ANPTAVRTFLNGTFVCFSGKSF
Ga0066861_101764871	3300005522	Marine	VFAGRAFNLLITKDMEIKAIIKKDKITMPNALKLDFKFKVYLVEIINPAKIHN*VIKIIGITKSGVTAKNLNIPGACAYPTPIRIFLKGTLLSLSGNNLAPITYINTPQTNQVRI
Ga0066865_103626343	3300005523	Marine	MDKNTIIKNDKKTIPKDLILDFKPNTCFVEIINPAKIQNCVRKIIGIIILGVTAKNLSKPGA*ANPTAVKTFLKGTFAFLSGKSFT
Ga0066865_103921182	3300005523	Marine	LIGIAFILLITKDIDKKAIIKKDKKTIPKDLKFDFKLRICLVEIIKAAKIQNVKKIIGIIKSGVTAKNLNKPGAAKPTAVKTFLKGTFVCLSGNSFTPITNINIAHINHV
Ga0066377_102092523	3300005934	Marine	MNVIERKAIIRKDKNTTPKDFRLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGA*AYPTAINTFLNGTLLPLSGKIFTPITKIKIAQTN
Ga0066370_102240201	3300005971	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVDIINPAKIQNCVRKIIGIINSGVTAKNLNRPGA*AKPTAVNTFLNGTLLFLSGNSLTPITKINIAQTNQ
Ga0066370_103132133	3300005971	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLSRPGA*AKPTAVNTFLNGTLLFLSGNSFTPITK
Ga0066836_109858251	3300006166	Marine	MTKAIEMKAIIKKAKITIPNALKFDFKFKICLVEIINPAKIQNVIKITGIIKSGVTAKNLNIPGAAYPTPTRTLLKGILL
Ga0075446_101127181	3300006190	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFL
Ga0075446_101891763	3300006190	Marine	LLIGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFKFKICFVEIIKLANIQNVRNIIGIIKSGVTAKNLKRPGAAKPTAVNTFLNGTL
Ga0068495_16131113	3300006337	Marine	MTKEIDKNAIIKKDKSTIPKDLKLDFKLNICLVEIIKPAKIQNWVRKIIGIIKSGVTAKNLNKPGACANPTAVKTFLNETLVCLSGNNFTPIT
Ga0075444_101766503	3300006947	Marine	MGKAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNVRNIIGIIKSGVTAKNLKSPGAANPTAVNTFLN
Ga0101667_10645233	3300007116	Volcanic Co2 Seep Seawater	LIGKAFILLITNEIDKKTIIKNDIKTIPNDFKLDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLNKPGA*AKPTAVNTFLNGTLLF
Ga0101671_10425461	3300007133	Volcanic Co2 Seeps	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDIKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLKRPGA*AKPTAVNIFLNGTLLFLSGNSLTPITKINIAQTNQVNIA
Ga0163111_102516674	3300012954	Surface Seawater	LIGNSFILLITKEIDKKAIVKKDKKTIPKDLKLDLRFSICFVEIIKAAKIQNCVRKIIGIIKSGVIAKNLNKPGACAKPTAVKTFLKFTLVCLSGNNLTPITKINIAQTNQ
Ga0163111_120749411	3300012954	Surface Seawater	MINAIDRKAIIKKERKTTPKALKLDFKFNICFVEIIKPAKIQNCVIKIIGIIKSGVTAKNLNKPGACAKPTVVKTFLKEKEFKDLNDICDQF*
Ga0182063_13985982	3300016781	Salt Marsh	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEIIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTFVCLSGKSLTPITKMKIAHINQVTIAVR
Ga0181428_10582431	3300017738	Seawater	MNVIDRKAIIRNDKNTIPNDFKLDFKFKICLVDIIRDANIQNXVRKIMGRTRSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLSGKIF
Ga0181397_11786673	3300017744	Seawater	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPMTK
Ga0181382_11438981	3300017756	Seawater	MXLIGIASILLITKEIDKNAIIKNDKKTIPKDFKFDLRFNICLVEMIKAAKIQNXVKKIIGIIKSGVTAKNLNKPGAXAKPTATKTFL
Ga0181382_11938082	3300017756	Seawater	MXLIGIAFIRLITKEIDKKAIIKKDKKTIPNDLKFDFRFNICLVDIINAANIQNCVKKIIGIIKSGVTAKNLNKPGACAKPTAVKTFLNGTFVCLSGNNFT
Ga0181410_11638461	3300017763	Seawater	LFIGKTFILLITKDIDRKTIIRKDKNTIPKDFKLDFKFKICFVEIINPANIQNCVKKIIGIIKSGVTAKNLIKPGACAKPTAVNTFLNGTFVCFSGNSLTPIT
Ga0181413_12299452	3300017765	Seawater	MXLIGNAFILLITKEIDKKAIIKKDKKTIPKDFKFDLRFKICFVEIIKAAKIQNXVKKIIGIIKSGVTAKNLNKPGAXANPTAVKTFLKGTFVCLSGNSFTPITKINNAQI
Ga0181423_13309862	3300017781	Seawater	MTKEIDKKAIIKKDKNTIPNDLKFDLRFKTCFVEIISPAKIQNXVKKIIGIIKSGVTAKNLNKPGAXAKPTAVKTFLNGTLLCLSGN
Ga0181380_13012832	3300017782	Seawater	MRLITKEIDKKTIIKKDKNIIPKDLKFDLMFKTCFVDIINAAKIQNCVIKIIGIIKSGVMAKNLKRPGACAKPTAVNTFLKDTLTCLSGNNLTPITKTSIA
Ga0181379_12417771	3300017783	Seawater	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFKFKTSFVEIINPANIQNXDRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTFVSLSGN
Ga0181565_107327361	3300017818	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTLVCLSGKSLTPITKMKIAHINQVTI
Ga0181569_110488531	3300017986	Salt Marsh	MFILLITNVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPANIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTF
Ga0181559_107735132	3300018415	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIRPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTLVCLSGKSLTPITKMKIAHINQVTIAVRP
Ga0181568_113822793	3300018428	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFL
Ga0181564_105020413	3300018876	Salt Marsh	MFILLITKVIDRKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNDTLVCLSGKSLTPITKMKIAHIN
Ga0211492_10983681	3300020238	Marine	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVKTFLNDTFVCLSGKSLTPITKIKI
Ga0211534_10293683	3300020261	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICLVDIIRDANIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLS
Ga0211619_10444531	3300020288	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAINTFLNGTLLPLSG
Ga0211520_10703822	3300020294	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICLVEIIRDAKIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLSGKIFTPITKI
Ga0211517_10571402	3300020319	Marine	MTKEIDKKAIIKKDKNTIPNDLKFDLRFKTCFVEIISPAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTL
Ga0211593_10738883	3300020334	Marine	LTGRTSILLITKEIDRKAIIKKDKNTTPNDFKFDFKFKICFVAIIKAAKIQNXVKNMIGTINSGVTAKNLINPGACANPTAVKTFLKDTLVCLSG
Ga0211508_11022681	3300020337	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICLVEIIRDAKIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLPLSGKIFTPITKIKIAQTNHVKRAVKP
Ga0211674_101589011	3300020368	Marine	MTKEIDKKAIIKKDRNTIPKDLRLDLRFKICFVEIISPAKIQNCVKKIIGIINSGVTAKNLNKPGAXANPTAVKTFLKGTLLCLSGNNFTPITKINIAQISQVIIAVS
Ga0211682_101020933	3300020376	Marine	MLLIVKLSIXLITKDIDIKAIIKKDKNTTPNDLKLDFKFKICFVEIIKPANIQSXVKNIIGIIKFGVTAKNLRRPGECAKPTAIKTFLNDTFVSLSGNNLTPTTNIHKAQTNQVRIEV
Ga0211682_102754671	3300020376	Marine	MGKVSIXLITNDIDIKAIIKNDKNTIPNDLKLDFKPKICFVEIIKPANIQSXVKNIIGIIKSGVTAKNLMRPGEWAKPTAIKIFLKGTFVSLSGNSFTPTTNINKAHTNQVRI
Ga0211590_102199933	3300020387	Marine	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEMIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGACANPTAVRTFLNETLVCLSGKSLTPITKMKIAHINQVTIAV
Ga0211678_103380221	3300020388	Marine	MVKAFILLITKDIERKAIIKKDKKTTPNDLKLDFKFKICFVEIINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTPVNTFLNETFESLSGNNFTPIT
Ga0211636_102707391	3300020400	Marine	MFILLITNEIDKKAIIKKDKKTIPKDLKFDLRFKICFVEIIKPAKIQNCVKNIIGIIKSGVKAKNLKRPGAXAKPTAVKTFLKDTLVCLSG
Ga0211499_103332602	3300020402	Marine	LFTGRTFILLITNEIDKNAIIKKDKKTIPKDFKLDFKFKICLVDIIKPAKIQNCVKKIIGIIKSGVTAKKRIKPGACAKPTAVKTFLNGTFVCLSGKSFTPITNIKIAQMSHVNI
Ga0211532_104141022	3300020403	Marine	MDKKAMIRKDRNTIPKDLKFDLRLSICFVEIIKAANIQNXVRKIIGIINSGVIAKNLNNPGAXANPTAVKTFLKGILLVCLSGNSLTPITKINIAQTNHVIIAVNP
Ga0211659_104900931	3300020404	Marine	LTGSIFILLITNEIDKKAIIKKDNKTIPKDLKLDFKFKISFVEIIKPAKIQNXVRKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLNETLVCLSGKSLTPITKMK
Ga0211496_103132171	3300020405	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAINTFLNGTLLPLSGKIFTPITKIK
Ga0211575_103108163	3300020407	Marine	VLIGRAFILLITKDIDKKAIIRKDKKTIPKDFIFDFKFKICFVDIINPAKIQNXVRKIIGIIKSGVTAKNLNNPGEXAYPTAIKIFLNGTLVSLSGN
Ga0211651_102802433	3300020408	Marine	LIGIVSILLITKEIDKKAMIKKDKNTIPNDLMFDLRFKICFVDIIKAAKIQNXVKKIIGIIRSGVTAKNLNNPGAWANPTAVKTFLNDTLVCLSGNSFTPITKIKTAQ
Ga0211702_101775131	3300020422	Marine	MAFILLITKVIDKKAIIKKDKNTIPKDFKFDLRFKICFVDIINAAKIQNXVKKIIGIISSGVTAKNLNKPGACANPTAVRTFLKDTFVCLSGNNFTPITKIKIAQT
Ga0211521_101904981	3300020428	Marine	MWLIGIAFILLITKEIDKKAIIKKDKKTIPKDLKFDLRFNICLVDIIKAAKIQNCVRKIIGIIKSGVTAKNLNNPGAXANPTAVKTFLKGTLVCLSGKSFTPIT
Ga0211622_104479032	3300020430	Marine	MTKDIDKKAIIKKDKKTIPKDFIFDLSPRICLVAMIKAAKIQNXVKKIIGIIKSGVTAKNLIKPGACANPTAVKTFLNDTLVCLSGNSFTPITKINIAQINQVIIAVNPDI
Ga0211565_105171531	3300020433	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLNRPGAXAKPTAVSIFLNGTLLFLSGNSLTPITKINIAQTNQVNIAVTPD
Ga0211708_100113841	3300020436	Marine	LLTGRTFILLITKEIDKKAIIKKDKKTIPKDFKLDFKFKICLVDIIKPAKIQNCVKKIIGIIKSGVTAKKRIKPGACAKPTAVKTFLNGTFVCLSGKSFTPITNIKIAQMSHVNIAVR
Ga0211708_103037871	3300020436	Marine	MNVIERKAIIRNDKNTIPKDFKLDFKFNICLVDIIREAKIQNCVRKIIGKTKSGVTAKNLIRPGAXAYPTAIKTFLNGTLLPLSGKIFTPITNIKIAQTNHVK
Ga0211708_103284463	3300020436	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAIKTFLNGTLLPLSGKIFTPITNIKIAQTNHVKRAVKP
Ga0211708_103413563	3300020436	Marine	LIGKAFIRLITNEIDKKTIIKNDIKTIPNDFKFDLRLRTCRVEIINPAKIQNCVRKIIGIINSGVTAKNLNRPGAXAKPTAVNTFLNGTLLFLSGNSLTPI
Ga0211539_103023491	3300020437	Marine	MDKKAIIKKDKKIIPNDFKFDFKFKICFVAIINAAKIQNXVRNIIGTINSGVTAKNLSSPGEWAKPTAVKTFLKETF
Ga0211576_104484191	3300020438	Marine	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPMTKINIPQINQVRIAVNP
Ga0211558_103213841	3300020439	Marine	MNVIDRKAIIRKDKNTIPNDFKLDFKFKICFVEIIRDAKIQNXVRKIIGRTKSGVTAKNLIKPGAXAYPTAIKIFLKGTLLP
Ga0211558_105290183	3300020439	Marine	MNVIERKAIIRNDKNTIPKDFKLDFKFNICLVDIIREAKIQNCVRKIIGKTKSGVTAKNLIRPGAXAYPTAIKTFLNGTLLPL
Ga0211559_103706851	3300020442	Marine	LIGIVSILLITKEIDKKAMIKKDKNTIPNDLMFDLRFKICFVDIIKAAKIQNXVKKIIGIISSGVTAKNLNNPGAWANPTAVKTFLNDTLVCLSGNSFT
Ga0211564_104220191	3300020445	Marine	LTGSIFILLITKEIDKKAIIKKDKNTIPKDLKFDLRFRTCFVDIIRAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXANPTAVKTFLKGILICLSGNSFTPITYINSAQTN
Ga0211638_101574281	3300020448	Marine	MXLIGKAFILLITKDIDKKAIIKKDKNTIPKDLKFDLRFNICLVDIIKAAKIQNWVKKIIGIIKSGVTAKNLKSPGAXAKPTAVSTFLKGTLVCLSGNIFTPITNIKIAQINQVSIAVSPDI
Ga0211473_103901811	3300020451	Marine	MTKDIDKKAIIKKDKKTIPKDFIFDLSPRICFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLIKPGACAKPTAVKTFLNETLVCLSGNSFTPI
Ga0211473_106828033	3300020451	Marine	MXLTGITFILLITKEIDKKAIIKKDKKTIPKDLKFDLRFKTCFVEIIKAAKIQNXVKKIIGIIKLGVTAKNLNKPGAXAKPTAVKTFLK
Ga0211548_105837832	3300020454	Marine	MDKNTIIKKDKNTIPNDFKLDFKLRVCFVDIIKAAKIQNXVRKIIGIINSGVIAKNLIKPGAXAKPTAVKIFLNGIFVCLSGKSLTPITYMNMPQTNHVIIAVSP
Ga0211664_101752973	3300020455	Marine	MXLTGKAFILLITNEIDKKTIIKNDKKTIPKDLIFDLRFRISLVEIINAAKIQNCVKKIIGIINSGVKAKNLSKPGAXAKPTAVKTFLKETFVCFSGKSFTP
Ga0211551_106171691	3300020456	Marine	VLTGKESNLLITKDIDMKAIIKNDKITTPKALKFDFRFNVCLVAIINPANIQNXVIKIIGINKSGVTAKNLNIPGAXAYPTLIKTFLKGTLVSLSGNNL
Ga0211643_103886401	3300020457	Marine	MXLIGIAFIRLITKEIDKKAIIKKDKKTIPNDLKFDLRFNICLVEIIRAAKIQNCVKKIIGIIKSGVTAKNLNRPGAWAKPTAVKTFLKGTFVCLSGKSFTPITKMNIAQIN
Ga0211535_103062231	3300020461	Marine	MXLTGSTFILLITKEIDKKTINKKDKNTIPKDLKLDFRFKICLVAIINPANIQNCVKKIIGTINSGVIAKNLNNPGAWANPIAVKTFLKV
Ga0211676_105200963	3300020463	Marine	LIGKASILLITKEIDKKTIIKNDKKTIPNDLKLDLRFKICFVDIISAANIQNXVKKIIGIINSGVTAKNLNIPGACANPTAVNTFLKET
Ga0211640_102797422	3300020465	Marine	VLIGIASILLITNDIDRNAIIRKDKKIIPKDLKLDFILSICLVAIINDAKIQNCVIKMIGITSSGTTAKNLINPGACAYPTPINIFLNDTLVSLSGKSFT
Ga0211640_106318091	3300020465	Marine	VSILLMTNEIDKNIIIKNERKTIPNDFKLDLRFKICLVDKIKAAKIQNXVKKIIGIINSGVTAKNLNNPGACAKPTAVRTFLNETLVCL
Ga0211714_104832383	3300020466	Marine	MAFILLITKVIDKKAIIKKDKNTIPKDFKFDLRFKICFVDIINAAKIQNXVKKIIGIISSGVTAKNLNKPGACANPTAVKTFLKDTFVCLSGNNFTPITKIKIAQ
Ga0211547_104269493	3300020474	Marine	MXLIGIVFILLITKDIDKKAIIKKDKKTIPKDFKFDLKLRICLVEIIKAAKIQNXVKKIIGIIKSGVTAKNLNKPGAWAKPTAVKTFLNGTFVCLSGNSFTPITNINIAHIN
Ga0211541_103880723	3300020475	Marine	MXLIGIAFILLITKEIDKKAIIKKDRKTIPKDLKFDLRFNICLVEIIKAAKIQNCVKKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLKG
Ga0211503_104064853	3300020478	Marine	MNVIERKAIIRKDKNTTPKDFKLDFKFNICFVDIIKEANIQNCVRKIIGKTKSGVTAKNLIKPGAXAYPTAINTFLNGTLLPLSGKIFTPIT
Ga0213862_103225011	3300021347	Seawater	MTNDIDKNAIIKKDKKTIPNDLKFDFKFKICLVAIINAAKIQNXVRNIIGTINSGVTAKNLINPGAXAKPTAVKTFLKGTFVCLSGKILTPIT
Ga0206681_102655533	3300021443	Seawater	MGRASILLITNEIDKNAIIKKDKNTIPKALKLDFKFRICFVAIINDAKIQNXVKNTIGITKSGVTAKNLNKPGAXAYPTAISIFLNVTLVSLSENNLT
Ga0224906_11232232	3300022074	Seawater	MXLTGNTFILLMTKEIDKKAIIKKDKNTIPNDLKFDLRFKTCFVEIISPAKIQNXVKKIIGIIKLGVTAKNLSKPGAXAKPTAVKTFLNGTLL
Ga0222652_10591182	3300022853	Saline Water	MLLIGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFKFKTSFVEIIKLANIQNXVRNIIGIIKSGVTAKNLKRPGAXANPTAVKTFLNGTLLSLS
(restricted) Ga0233432_103116263	3300023109	Seawater	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLVSLSGNNFTPIT
Ga0255743_104248721	3300023110	Salt Marsh	MTNDIDKNAIIKKDKKTIPNDLKFDFKFKICFVAIINAAKIQNXVRNIIGTINSGVTAKNLINPGAXAKPTAVKTFLKGTFVCLSGKILTPIT
Ga0255759_105914901	3300023178	Salt Marsh	MDKKAIIKKDKNTIPKDLKFDLRFKICFVDIIKAAKIQNCVKKIIGIINSGVTAKNLISPGAXANPTAVKTFLNDTFVCLSGNNFTPITKINIAHTNQVRIA
Ga0228636_11164691	3300024191	Seawater	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKT
Ga0228658_11703632	3300024297	Seawater	MGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPITKINTPQI
Ga0228670_11088613	3300024319	Seawater	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDLKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCL
Ga0209494_11875041	3300025673	Methane Seep Mesocosm	MGSAFILLITKVIDKKAIIKKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLSNPGEXAYPTAIKIFLNGTLVSLSGNNLTPITK
Ga0209505_11843632	3300025690	Pelagic Marine	LTGRTFILLITKEIDKKAIIKKDKNTIPKDLKFDLRFKTCFVDIIKAAKIQNXVRKIIGTIKPGVTAKNLNRPGAXAKPTAVNTFLKGILVCLSGNNLTPMTN
Ga0209715_10849053	3300025699	Pelagic Marine	NDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETFCFFIWK
Ga0209362_12439123	3300025770	Marine	MGSIFILLITKEIDKNAIIKNDKNTIPKDLILDFKPSTCFVEIINPAKIQNCVRNIIGIIIFGVTAKNLNKPGAXAKPTAVNTFLKGTFV
Ga0209832_11465791	3300025830	Pelagic Marine	MXLIGSAFILLITNEIDKNAIIKKDKNTIPKDFKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLS
Ga0209308_103857521	3300025869	Pelagic Marine	MRLITKEIDKKTIIKNDKNIIPKDLKFDLMFKTCFVDIINAAKIQNCVIKIIGIIKSGVIAKNLKRPGACAKPTAVNTFLKDTLTCLSGNNLTPTTKTSIAQTN
Ga0209308_104062551	3300025869	Pelagic Marine	MXLIGSVFILLITNEIDKNAIIKKDKNTIPKDLKFDFRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTAVKTFLKGTLVCLSGNNFTPMTKINIPQINQVRIAVNP
Ga0209630_103351671	3300025892	Pelagic Marine	MXLTGNTSILLITKEIDKKAIIKKDKNTIPKDLKFDLRFKTCFVDIIKEAKIQNXVKKIIGIIKSGVTAKNLNNPGAXAKPTAVKTFLKGTFVCLSGNNFTPITKINIAQINH
Ga0208624_11206861	3300026093	Marine	MAFILLITKVIDKKAIIKKDKNTIPKDFKFDLRFKICFVDIINAAKIQNXVKKIIGIISSGVTAKNLNKPGACANPTAVRTFLKDTLVCLSGNN
Ga0208959_10267143	3300027062	Marine	MGRAFILLITKVIDKKAIIKKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLSNPGEXAYPTAIKIFLNGTLVSLSGNNLT
Ga0208963_10567341	3300027170	Marine	MGRAFILLITNDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNGT
Ga0208437_11407603	3300027525	Estuarine	MGRAFILLITNDIERKAIIKKAKKTIPKDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNET
Ga0209710_11955913	3300027687	Marine	MGRAFILLITKDIDKNAIIKKDKKTIPNDLKLDFKFKICFVEIINPANIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTPINIFLNGTLLSLSG
Ga0209710_12484663	3300027687	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVSNIIGIIKSGVTAKNLNKPGAXANPTAVKTFLNETLVSLSGN
Ga0209036_11084181	3300027702	Marine	MDKNAIIRKDKNTIPKDLKLDLRFKTCFVDIIKAAKIQNXVKKIIGIIKSGVTAKNLNNPGAXAKPTAVKTFLNDTLDCLSGNSFTPITKMKIAHINQV
Ga0209192_102729781	3300027752	Marine	LLITNDIERKAIIKKAKKTIPKDLKLDFRFKTCFVEMIKLANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETFVS
Ga0209709_102624351	3300027779	Marine	MGRAFILLITKDIDKNAIIKKDKKTIPNDLKLDFKFKICFVEIINPANIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTPINIFLNGILLSLSGNSFTPTTNINRAQ
Ga0209502_102032933	3300027780	Marine	MGRAFILLITKDIDKNAIIKKDKKTIPNDLKLDFKFKICFVEIINPANIQNXVKKIIGIIKSGVTAKNLSKPGAXAKPTPINIFLNGTLLSLSGN
Ga0209502_104318651	3300027780	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLNKPGAXANPTAVNTFLNGTFVSLSGNNFTPIT
Ga0209830_101964621	3300027791	Marine	MTKDIERKAIIKNDKKTTPNDLKLDFKFKTCFVQIIRLANIQNXVRNIIGIIKSGVTAKNLKRPGAXANPTAVNTFLKETLLSLSGNIFTPIT
Ga0209091_102957623	3300027801	Marine	MKDIERKAIIKKAKKTIPNDLKLDFKFKTCFVEMIKLANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLV
Ga0233397_11486681	3300028111	Seawater	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNEPLVSLSGNNFTPIT
Ga0257114_11915963	3300028196	Marine	LLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETFVSLSGNNFT
Ga0257110_11618643	3300028197	Marine	MGKAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNETLVSLSGNNFTPIT
Ga0308022_12166291	3300031142	Marine	MGKVSIXLITNDIDIKAIIKNDKNTIPNDLKLDFKPKICFVEIIKPANIQSXVKNIIGIIKSGVTAKNLMRPGEWAKPTAIKIFLKGTFVSLSGNSFTPTTNI
Ga0308025_12926291	3300031143	Marine	MTKDIERKAIIKKDKKTTPNDLKLDFKFKICFVQIIKLANIQNXVRNIIGIIKSGVTAKNLIRPGAXAKPTAVNTFLNGTFVSLSGNIFTPIT
Ga0307488_107834673	3300031519	Sackhole Brine	LLIGRTFILLTTKDIDKKAIIKKAKKTIPNDLKLDFKFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKRPGAXANPTAVKTFLN
Ga0307488_108331501	3300031519	Sackhole Brine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVRNIIGIIKSGVTAKNLKSPGAXANPTAVKTFLNGTLVSLSGNNFTPIT
Ga0308007_102371672	3300031599	Marine	MGKVSIXLITNDIDIKAIIKNDKNTIPNDLKLDFKPKICFVEIIKPANIQSXVKNIIGIIKSGVTAKNLMRPGEWAKPTAIKTFLKGTFISLSGKSFTPTTNINKAQTNQVR
Ga0308004_103372923	3300031630	Marine	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEIINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPTAVNTFLNET
Ga0307986_104398341	3300031659	Marine	MLLIVKLSIXLITKDIDIKAIIKKDKNTTPNDLKLDFKFKICFVEIIKPANIQSXVKNIIGIIKFGVTAKNLRRPGECAKPTAIKTFLN
Ga0302122_102795971	3300031675	Marine	MGKAFILLITKDIERKAIIRKAKKTIPNDLKLDFKFKTSFVEIIKLANIQNXVRNIIGIIKSGVTAKNLNKPGAXAKPTAVNTFLNETLVSLSGNNFTPIT
Ga0308013_102775953	3300031721	Marine	LPIGRAFILLMIKDIDKNAIIKKAKKTIPNDLKLDFKFKTCFVEIIKLANIQNXVRNIIGIIKSGVTAKNLNRPGAXAKPTAVNTFLNGAF
Ga0308013_102971141	3300031721	Marine	LLIGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMIKPANIQNXVINIIGIIKSGVTAKNLKSPGAWANPTAVSTFLNGTLVSLSGN
Ga0315332_109566903	3300031773	Seawater	MDKKAIIRKDKKTIPKDLRLDLRFNICLVEIIRAAKIQNXVKKIIGIIKSGVTAKNLNKPGAXAKPTAVRTFLKETFV
Ga0315331_111933191	3300031774	Seawater	MFILLITNDIDRKAIIKKDKSTIPKDLKLDLRFNICLVEIINPAKIQNXVRKIIGIIKSGVTAKNLNNPGAXANPTAVKTFLKETLVCLSGN
Ga0315316_107508291	3300032011	Seawater	MGRAFILLITKDIERKAIIKKAKKTIPNDLKLDFRFKTCFVEMINPANIQNXVKNIIGIIKSGVTAKNLKSPGAXANPIAVKTFLNGTLVSLSGNNFTPIT
Ga0315316_115930651	3300032011	Seawater	MGRAFILLITKVIDKKAIIRKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLNNPGEXAYPTAIKIFLNGTLVSLSGNNLTPTTKINND
Ga0315315_110617991	3300032073	Seawater	MIKKDKNTIPKDLKFDLRFKICFVDIIKPAKIQNXVRKIIGTIKSGVTAKNLNSPGAXAKPTAVNTFLKGTLVCLSGNNLAPITNIKTAQTNQVIIAVNPDIATAV
Ga0310345_123060522	3300032278	Seawater	MGRAFILLITKVIDKKAIIRKDKKTIPKDFIFDFKLKICFVDIINPAKIQNXVRKMIGIIKSGVTAKNLNNPGEXAYPTAIKIFLNGTLVSLSGNNLTPTTKINNAQINQVTIAVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters