Metagenome Family F051955

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051955
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	87 residues
Representative Sequence	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA
Number of Associated Samples	105
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.22 %
% of genes near scaffold ends (potentially truncated)	33.57 %
% of genes from short scaffolds (< 2000 bps)	80.42 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (14.685 % of family members)
Environment Ontology (ENVO)	Unclassified (58.741 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (78.322 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 10.26% β-sheet: 28.21% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF07238	PilZ	25.87
PF13185	GAF_2	9.09
PF01590	GAF	8.39
PF03060	NMO	6.99
PF05524	PEP-utilisers_N	4.90
PF13492	GAF_3	2.80
PF13840	ACT_7	2.10
PF02784	Orn_Arg_deC_N	1.40
PF13413	HTH_25	1.40
PF13489	Methyltransf_23	0.70
PF13464	DUF4115	0.70
PF00278	Orn_DAP_Arg_deC	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	6.99
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	6.99
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	2.10
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	2.10

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.45 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	27.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	24.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	13.99 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	7.69 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples	5.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Sphingomonas sp. URHD0057	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	6.29 %
uncultured Sphingopyxis sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	5.59 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1.40 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001977\|JGI24746J21847_1016588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	1051	Open in IMG/M
3300001990\|JGI24737J22298_10089475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	913	Open in IMG/M
3300001990\|JGI24737J22298_10202227	Not Available	586	Open in IMG/M
3300001991\|JGI24743J22301_10046514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	878	Open in IMG/M
3300002244\|JGI24742J22300_10087061	Not Available	595	Open in IMG/M
3300002568\|C688J35102_119009367	Not Available	625	Open in IMG/M
3300003267\|soilL1_10157975	Not Available	1508	Open in IMG/M
3300003319\|soilL2_10195550	Not Available	1313	Open in IMG/M
3300004114\|Ga0062593_102970153	Not Available	542	Open in IMG/M
3300005093\|Ga0062594_100699769	Not Available	914	Open in IMG/M
3300005093\|Ga0062594_101082323	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300005093\|Ga0062594_103391699	Not Available	501	Open in IMG/M
3300005178\|Ga0066688_10882169	Not Available	553	Open in IMG/M
3300005179\|Ga0066684_10053612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2322	Open in IMG/M
3300005184\|Ga0066671_10249212	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300005293\|Ga0065715_10079422	Not Available	610	Open in IMG/M
3300005327\|Ga0070658_10011743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	7027	Open in IMG/M
3300005327\|Ga0070658_10559229	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300005328\|Ga0070676_10599969	Not Available	794	Open in IMG/M
3300005329\|Ga0070683_100490841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1173	Open in IMG/M
3300005329\|Ga0070683_102376711	Not Available	508	Open in IMG/M
3300005331\|Ga0070670_100025139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	5124	Open in IMG/M
3300005331\|Ga0070670_100447168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1145	Open in IMG/M
3300005331\|Ga0070670_100523490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1056	Open in IMG/M
3300005334\|Ga0068869_101649881	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300005335\|Ga0070666_10354883	Not Available	1050	Open in IMG/M
3300005337\|Ga0070682_100098309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	1928	Open in IMG/M
3300005337\|Ga0070682_100335658	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300005338\|Ga0068868_100026405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	4425	Open in IMG/M
3300005339\|Ga0070660_100553551	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M
3300005341\|Ga0070691_10830267	Not Available	565	Open in IMG/M
3300005343\|Ga0070687_100317613	Not Available	994	Open in IMG/M
3300005347\|Ga0070668_100078849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2577	Open in IMG/M
3300005355\|Ga0070671_100006899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	9096	Open in IMG/M
3300005355\|Ga0070671_100011836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	7018	Open in IMG/M
3300005355\|Ga0070671_100079975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	2732	Open in IMG/M
3300005356\|Ga0070674_100600923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	929	Open in IMG/M
3300005367\|Ga0070667_100010882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	7523	Open in IMG/M
3300005367\|Ga0070667_101044587	Not Available	763	Open in IMG/M
3300005367\|Ga0070667_101169576	Not Available	720	Open in IMG/M
3300005451\|Ga0066681_10402026	Not Available	842	Open in IMG/M
3300005454\|Ga0066687_10119686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1356	Open in IMG/M
3300005455\|Ga0070663_100100580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	2157	Open in IMG/M
3300005456\|Ga0070678_100028421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	3813	Open in IMG/M
3300005456\|Ga0070678_100427809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1155	Open in IMG/M
3300005456\|Ga0070678_100504089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1068	Open in IMG/M
3300005466\|Ga0070685_10919945	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300005539\|Ga0068853_100459992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300005542\|Ga0070732_10422158	Not Available	805	Open in IMG/M
3300005543\|Ga0070672_100027563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	4239	Open in IMG/M
3300005543\|Ga0070672_100240796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	1521	Open in IMG/M
3300005561\|Ga0066699_10584500	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300005564\|Ga0070664_100017319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	5915	Open in IMG/M
3300005564\|Ga0070664_100071345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	2976	Open in IMG/M
3300005568\|Ga0066703_10464361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	757	Open in IMG/M
3300005576\|Ga0066708_10297948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1032	Open in IMG/M
3300005578\|Ga0068854_102097141	Not Available	522	Open in IMG/M
3300005834\|Ga0068851_10704398	Not Available	622	Open in IMG/M
3300005843\|Ga0068860_102171491	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300006358\|Ga0068871_101884934	Not Available	568	Open in IMG/M
3300006881\|Ga0068865_100310777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1265	Open in IMG/M
3300009177\|Ga0105248_10304886	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300009177\|Ga0105248_10470106	All Organisms → cellular organisms → Bacteria → Proteobacteria	1417	Open in IMG/M
3300010373\|Ga0134128_10655848	All Organisms → cellular organisms → Bacteria → Proteobacteria	1166	Open in IMG/M
3300010375\|Ga0105239_13155139	Not Available	537	Open in IMG/M
3300010400\|Ga0134122_11318469	Not Available	731	Open in IMG/M
3300011119\|Ga0105246_10978426	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300012212\|Ga0150985_113803511	Not Available	555	Open in IMG/M
3300012212\|Ga0150985_115234572	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300012469\|Ga0150984_102744405	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300012923\|Ga0137359_10228448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1661	Open in IMG/M
3300012951\|Ga0164300_10634608	Not Available	636	Open in IMG/M
3300012955\|Ga0164298_10586023	Not Available	763	Open in IMG/M
3300012955\|Ga0164298_11217923	Not Available	571	Open in IMG/M
3300012958\|Ga0164299_10054587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1887	Open in IMG/M
3300012958\|Ga0164299_11520203	Not Available	523	Open in IMG/M
3300012961\|Ga0164302_11684087	Not Available	531	Open in IMG/M
3300012977\|Ga0134087_10150816	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300012984\|Ga0164309_10312191	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300012986\|Ga0164304_11725541	Not Available	523	Open in IMG/M
3300013102\|Ga0157371_10299373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300013296\|Ga0157374_10887656	Not Available	909	Open in IMG/M
3300013296\|Ga0157374_12477796	Not Available	546	Open in IMG/M
3300013297\|Ga0157378_10266605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1645	Open in IMG/M
3300013297\|Ga0157378_10704250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300013306\|Ga0163162_12026431	Not Available	660	Open in IMG/M
3300013308\|Ga0157375_11205830	Not Available	888	Open in IMG/M
3300014325\|Ga0163163_12504294	Not Available	574	Open in IMG/M
3300014497\|Ga0182008_10541911	Not Available	645	Open in IMG/M
3300014745\|Ga0157377_11025943	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300015371\|Ga0132258_10059298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	8807	Open in IMG/M
3300017792\|Ga0163161_10548870	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300025315\|Ga0207697_10089743	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300025321\|Ga0207656_10694854	Not Available	521	Open in IMG/M
3300025321\|Ga0207656_10747544	Not Available	501	Open in IMG/M
3300025893\|Ga0207682_10015216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2994	Open in IMG/M
3300025893\|Ga0207682_10058536	Not Available	1608	Open in IMG/M
3300025899\|Ga0207642_10169881	Not Available	1179	Open in IMG/M
3300025901\|Ga0207688_10035506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	2762	Open in IMG/M
3300025903\|Ga0207680_10407407	Not Available	961	Open in IMG/M
3300025903\|Ga0207680_11169647	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300025904\|Ga0207647_10019401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	4574	Open in IMG/M
3300025904\|Ga0207647_10035085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3199	Open in IMG/M
3300025904\|Ga0207647_10580237	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300025904\|Ga0207647_10665245	Not Available	570	Open in IMG/M
3300025907\|Ga0207645_10959317	Not Available	580	Open in IMG/M
3300025908\|Ga0207643_10088346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	1804	Open in IMG/M
3300025911\|Ga0207654_10399132	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300025911\|Ga0207654_10769025	Not Available	694	Open in IMG/M
3300025919\|Ga0207657_10108204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2298	Open in IMG/M
3300025919\|Ga0207657_10124773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	2115	Open in IMG/M
3300025919\|Ga0207657_10381452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1110	Open in IMG/M
3300025920\|Ga0207649_10437803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	984	Open in IMG/M
3300025925\|Ga0207650_11615562	Not Available	550	Open in IMG/M
3300025927\|Ga0207687_10341232	Not Available	1218	Open in IMG/M
3300025930\|Ga0207701_10364228	Not Available	1249	Open in IMG/M
3300025931\|Ga0207644_10000729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	20845	Open in IMG/M
3300025931\|Ga0207644_10356132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1189	Open in IMG/M
3300025932\|Ga0207690_10649789	All Organisms → cellular organisms → Bacteria → Proteobacteria	864	Open in IMG/M
3300025933\|Ga0207706_10095418	Not Available	2616	Open in IMG/M
3300025934\|Ga0207686_10216437	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300025935\|Ga0207709_10782755	Not Available	769	Open in IMG/M
3300025936\|Ga0207670_11232429	Not Available	634	Open in IMG/M
3300025940\|Ga0207691_10112444	Not Available	2420	Open in IMG/M
3300025940\|Ga0207691_10372120	Not Available	1220	Open in IMG/M
3300025940\|Ga0207691_10421616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1137	Open in IMG/M
3300025945\|Ga0207679_10295050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1395	Open in IMG/M
3300025960\|Ga0207651_10288466	Not Available	1359	Open in IMG/M
3300025960\|Ga0207651_10721616	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300025972\|Ga0207668_11037738	Not Available	734	Open in IMG/M
3300025972\|Ga0207668_12111677	Not Available	507	Open in IMG/M
3300025986\|Ga0207658_10713843	Not Available	907	Open in IMG/M
3300026035\|Ga0207703_11890805	Not Available	573	Open in IMG/M
3300026035\|Ga0207703_12295898	Not Available	515	Open in IMG/M
3300026118\|Ga0207675_102187545	Not Available	568	Open in IMG/M
3300026121\|Ga0207683_10383207	Not Available	1293	Open in IMG/M
3300026142\|Ga0207698_12512441	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300031938\|Ga0308175_100344850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → environmental samples → uncultured Sphingopyxis sp.	1536	Open in IMG/M
3300031938\|Ga0308175_101256444	Not Available	824	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	70.63%
Environmental	Environmental	29.37%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	70.63%
Terrestrial	Environmental → Terrestrial	29.37%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	43.36%
Soil	Environmental → Terrestrial → Soil	29.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.87%
Roots	Host-Associated → Plants → Roots	1.40%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	31.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.89%
Loam	Environmental → Terrestrial → Soil → Loam	6.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.50%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.40%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	31.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.40%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	14.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	9.09%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.40%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24746J21847_10165882	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	LLEKNSSAAPPLRNGVIDMIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA*
JGI24737J22298_100894753	3300001990	Corn Rhizosphere	MIMNAVLAVALGLTPVKPGIDTQVIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEG
JGI24737J22298_102022271	3300001990	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPXDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA*
JGI24743J22301_100465142	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYXGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA*
JGI24742J22300_100870611	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	MIMNAVLAVALGLTPVKPGIDTQVIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVE
C688J35102_1190093672	3300002568	Soil	MIMNAVLAVALGLAPVKPGQEAQVIHYNAADYAGLTGRFSQSTDRSGVTHLRGFDRMTGRPFDIAVASNGRV
soilL1_101579752	3300003267	Sugarcane Root And Bulk Soil	MILNAVLAVALGLAPVKSGQQVQVIQYNPSDYAGLIGKYNQSTDRKGNTHLTGYDRLTGRPFDIAVASDGRVEGTVGETYVTFTVSQGA*
soilL2_101955502	3300003319	Sugarcane Root And Bulk Soil	MILNAVLAVALGLAPVKSGQQVQVIQYNPSDYAGLIGKYNQSTDRNGNTHLTGYDRLTGRPFDIAVASDGRVEGTVGETYVTFTVSQGA*
Ga0062593_1029701532	3300004114	Soil	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA*
Ga0062594_1006997691	3300005093	Soil	MIMNAVLAVALGLTPVKPGIDTQVIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGTVGETFITFTVSEAA*
Ga0062594_1010823231	3300005093	Soil	MIPAQRPRCETEYLKMIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAELIGRYQQSTDRRGNTHLTGYDRLTGRPFDIAVARDGRVEGTVGETYVTFTVSQAA*
Ga0062594_1033916991	3300005093	Soil	MLMNAVLAVALGLAPVKADKAVIHYNPSDYAGMIGRYSQSIDKAGVTHLRGYDRLTGKPFDIAVRQDGRVEGSVGDSYITFTVSEAA*
Ga0066688_108821691	3300005178	Soil	MIMNAVLAVALGLAPVKPGQQVQVIQYEPSAYAGLIGRYNQSTDKRGTTHLTGFDRLTGRPFDIAVARDGRVEGSVGEMYVTFTVSEGA*
Ga0066684_100536122	3300005179	Soil	MIMNAVLAVALGLAPVKPGQQVQVIQYEPSAYAGLIGRHYQSTDKRGTTHLTGFDRLTGRPFDIAVARDGRVEGRVGEMYVTFTVSEGA*
Ga0066671_102492122	3300005184	Soil	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSAYAGLIGRYNQSTDRTGTTHLSGFDRVSGRPFDIAVASNGRVEGTVGEMYVTFNVAEGA*
Ga0065715_100794221	3300005293	Miscanthus Rhizosphere	MIMNAVLAVALGLAXVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA*
Ga0070658_100117434	3300005327	Corn Rhizosphere	MTPAQRPRCETEYLKMIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAELIGRYQQSTDRRGNTHLTGYDRLTGRPFDIAVARDGRVEGTVGETYVTFTVSQAA*
Ga0070658_105592291	3300005327	Corn Rhizosphere	MQRPRCEKGSMLMLMNAILAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070676_105999692	3300005328	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQFNPTDYSGLIGRYQQSTDRHGVTHLIGYDRLTGRPFDIAVAKNGHVEGTVGETYVTFTVSEGA*
Ga0070683_1004908412	3300005329	Corn Rhizosphere	MILNAVLAVALGLAPIKPGQEVQVINYNPSDYAGLIGRYNRSTDRGGTTHLTGFDRVTGRPFDIAVAKDGRVEGTVGETYVAFSVSERA*
Ga0070683_1023767111	3300005329	Corn Rhizosphere	MLMLMNAILAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070670_1000251397	3300005331	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA*
Ga0070670_1004471682	3300005331	Switchgrass Rhizosphere	NAVLAVALGLAPIKPGQEVQVINYNPSDYAGLIGRYNRSTDRGGTTHLTGFDRVTGRPFDIAIAKDGRVEGTVGETYVAFSVSERA*
Ga0070670_1005234902	3300005331	Switchgrass Rhizosphere	MIMNAVLAVALGLTPVKPGVDTQVIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGTVGETFITFTVSEAA*
Ga0068869_1016498811	3300005334	Miscanthus Rhizosphere	KSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA*
Ga0070666_103548832	3300005335	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA*
Ga0070682_1000983092	3300005337	Corn Rhizosphere	NAVLAVALGLAPIKPGQEVQVINYNPSDYAGLIGRYNRSTDRGGTTHLTGFDRVTGRPFDIAVAKDGRVEGTVGETYVAFSVSERA*
Ga0070682_1003356582	3300005337	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA*
Ga0068868_1000264052	3300005338	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQFNPTDYSGLIGRYQQSTDRHGVTHLIGYDRLTGRPFDIAVAKNGQVEGTVGETYVTFTVSEGA*
Ga0070660_1005535512	3300005339	Corn Rhizosphere	NAVLAVALGLAPAKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVGETYITFHVSEA*
Ga0070691_108302672	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA*
Ga0070687_1003176131	3300005343	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKAGQEVQTIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGTVGETFITFTVSEAA*
Ga0070668_1000788491	3300005347	Switchgrass Rhizosphere	MQRPRCEKGSMLMLMNAILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070671_1000068992	3300005355	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKTGQEVQVIQVNPSDYAGLIGRYNRTTDRSGNTHLTGFDRVTGRPFDIAVAKDGRVEGTVGNTYVTFTVSQRA*
Ga0070671_1000118369	3300005355	Switchgrass Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGITHLRGYDRMTGKPFDIAVRQDGRVEGSVGDTYVTFTVTEAA*
Ga0070671_1000799752	3300005355	Switchgrass Rhizosphere	MNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070674_1006009232	3300005356	Miscanthus Rhizosphere	MLMNAILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070667_1000108827	3300005367	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVGETYITFHVSEA*
Ga0070667_1010445871	3300005367	Switchgrass Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070667_1011695761	3300005367	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYITFNVSEGA*
Ga0066681_104020262	3300005451	Soil	MIMNAVLAVALGLAPVKPGQQVQVIQYEPSAHAGLIGRHYQSTDKRGTTHLTGFDRLTGRPFDIAVARDGRVEGRVGEMYVTFTVSEGA*
Ga0066687_101196861	3300005454	Soil	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSAYAGLIGRYNQSTDRTGTTHLSGFDRVSGRPFDIAVASNGRVE
Ga0070663_1001005803	3300005455	Corn Rhizosphere	MILNAVLAVALGLAPIKPGQEVQVINYNPSDYAGLIGRYNQSTDRRGTTRLTGFDRVTGRPFDIAVAKDGRVEGTVGETYVAFSVSERA*
Ga0070678_1000284212	3300005456	Miscanthus Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDITVRQDGRVEGSVGDTYVTFTLTEAA*
Ga0070678_1004278092	3300005456	Miscanthus Rhizosphere	MQRPRCEKGSMLMLMNAILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGFDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070678_1005040891	3300005456	Miscanthus Rhizosphere	MLMNAVLAVALGLAPVKADKAVIHYNPSDYAGMIGRYSQSIDKAGVTHLRGYDRLTGKPFDIAVRQDGRVEGSV
Ga0070685_109199452	3300005466	Switchgrass Rhizosphere	AVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0068853_1004599921	3300005539	Corn Rhizosphere	NSNAAPPLRNGVIDMIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA*
Ga0070732_104221581	3300005542	Surface Soil	MLMDAVLAVALGLAPIKAGHDAQVIFYRPRDYAGLIGRYSQSTDRRGTTHLRGFDRLTGKPFDIAVAQDGQVEGRVGDMYVTFHVSQGA*
Ga0070672_1000275633	3300005543	Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFSVSEAA*
Ga0070672_1002407962	3300005543	Miscanthus Rhizosphere	MLMNAVLAVALGLAPVKADKAVIHYNPSDYAGMIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0066699_105845002	3300005561	Soil	MIMNAVLAVALGLAPVKPGQQVQVIQYEPSAYAGLIGRHYQSTDKRGTTHLTGFDRLTGRPFDIAVARDGRVEGSVGEMYVTFTVSEGA*
Ga0070664_1000173192	3300005564	Corn Rhizosphere	MLMNAILAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0070664_1000713453	3300005564	Corn Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAELIGRYQQSTDRRGNTHLTGYDRLTGRPFDIAVARDGRVEGTVGETYVTFTVSQAA*
Ga0066703_104643612	3300005568	Soil	MIMNAVLAVALGLAPVKSGQQVQVIQYNATDYAGLIGRYHQSTDRSGTTHLTGFDRLTGRPFDIAVADNGRVEGTVGELYVTFKVSQRA*
Ga0066708_102979482	3300005576	Soil	MIMNAVLAVALGLAPVKPGQQVQVIQYEPSAYAGLIGRHYQSTDKRGTTRLTGFDRLTGRPFDIAVARDGRVEGRVGEMYVTFTVSEGA*
Ga0068854_1020971411	3300005578	Corn Rhizosphere	MIMNAVLAVALGLTPVKAGQEVQVIQYNPTDYAGLIGRYNQSTDRGGTTHLTGFDRLTGRPFDIAVARDGRVEGTVGDTYVTFSVSERA*
Ga0068851_107043982	3300005834	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLISRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA*
Ga0068860_1021714912	3300005843	Switchgrass Rhizosphere	LAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0066696_103022091	3300006032	Soil	MIMNAVLAVALGLAPVKPGQQVQVIQYEPSAYAGLIGRHYQSTDKRGTTHLTGFDRLTGRPFDIAVA
Ga0068871_1018849341	3300006358	Miscanthus Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDITVRQDGRVEGSVGDTYVTFT
Ga0068865_1003107773	3300006881	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVT
Ga0105248_103048863	3300009177	Switchgrass Rhizosphere	MHMLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDITVRQDGRVEGSVGDTYVTFTLTEAA*
Ga0105248_104701062	3300009177	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFSVSEAA*
Ga0134128_106558482	3300010373	Terrestrial Soil	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYITFNVSEGA*
Ga0105239_131551392	3300010375	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVG
Ga0134122_113184691	3300010400	Terrestrial Soil	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRIV
Ga0105246_109784262	3300011119	Miscanthus Rhizosphere	MIMNAVLAVALGLTPVKPGVDTQVIQYNPTEYAGLIGRYQKSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGTVGETFITFTVSEAA*
Ga0150985_1138035111	3300012212	Avena Fatua Rhizosphere	MIMNAVLAVALGLAPVKTGQEVQAIQVNPSDYAGLIGRYNRTTDRSGNTHLTGFDRVTGRPFDIAVTKDGRVEGTVGNTYVTFTVSERA*
Ga0150985_1152345722	3300012212	Avena Fatua Rhizosphere	MIMNAVLPVALGLAPVKPGQEAQVIHYNAADYAGLTGRFSQSTDRSGVTHLRGFDRMTGRPFDIAVASNGRVEGTVGGTYVTFQVSEGA*
Ga0150984_1027444051	3300012469	Avena Fatua Rhizosphere	MIMNAVLAVALGLAPVKPGQEAQVIHYNAADYAGLTGRFSQSTDRSGVTHLRGFDRMTGRPFDIAVASNGRVEGTVGETYVTFQVSEGA*
Ga0137359_102284482	3300012923	Vadose Zone Soil	MLMNAVLAVALGLAPIKAGHDAQVIHYRPGDYAGLIGRYSQATDSRGTTYLRGFDRLTGRPFDIAVAKDGQVEGSVGDMYVTFHVSEGA*
Ga0164300_106346081	3300012951	Soil	MHMLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDTYVTFTVTEAA*
Ga0164298_105860232	3300012955	Soil	MIMNAVLAVALGLTPVKPGIDTQVIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGT
Ga0164298_112179232	3300012955	Soil	MIMNAVLAVALGLAPVKPGQDVQVLQVNPSDYAGLIGRYNRTTDRSGNTHLTGFDRVTGRPFDIAVAKDGRVEGTVGNTYVTFTVSQRA*
Ga0164303_103848111	3300012957	Soil	MIMNAVLAVALGLAPVKTGQEVQVIQVNPSDYAGLIGRYNRTTDRSGNTHLTGFDRVTGRPFDIAVAK
Ga0164299_100545872	3300012958	Soil	MIMNAVLAVALGLAPVKTGQEVQVIQVNPSDYAGLIGHYNRTTDRSGNTHLTGFDRVTGRPFDIAVAKDGRVEGTVGNTYVTFTVSQRA*
Ga0164299_115202033	3300012958	Soil	LAPVKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVGETYITFHVSEA*
Ga0164302_116840872	3300012961	Soil	MIMNAVLAVALGLAPVKTGQEVQVIQVNPSDYAGLIGRYNRTTDRSGNTHLTGFDRVTGRPFDIAVAKDGRVEGTVGNTYVPFTVSQRACPP
Ga0134087_101508162	3300012977	Grasslands Soil	MIMNAVLAVALGLAPVKPGQQVQVIQYEPSAHAGLIGRHYQSTDKRGTTHLTGFDRLTGRPFDIAVARDGRVEGSVGEMYVTFTVSEGA*
Ga0164309_103121911	3300012984	Soil	MIRNAVLAVALGLAPVKTGQEVQVIQVNPSDYAGLIGRYNRTTDRSGNTHLTGFDRVTGRPFDIAVAKDGRVEGTVGNTYVTFTVSQRA*
Ga0164304_117255411	3300012986	Soil	VKPGIDTQVIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGTVGETFITFTVSEAA*
Ga0157371_102993732	3300013102	Corn Rhizosphere	ILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0157374_108876563	3300013296	Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSE
Ga0157374_124777963	3300013296	Miscanthus Rhizosphere	MIMNAVLAVALGLAPAKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVGETYITFHVSEA*
Ga0157378_102666053	3300013297	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVG*
Ga0157378_107042502	3300013297	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQYNPSDYSGLIGRYQQSTDRRGTTHLIGYDRLTGRPFDIAVAKSGRVEGTVGETYITFIVSEGA*
Ga0163162_120264312	3300013306	Switchgrass Rhizosphere	VLTNAFLAVALGIAPVKADKAVIHYNPSDYAGMIGRYSQSIDKAGVTHLRGYDRLTGKPFDIAVRQDGRVEG
Ga0157375_112058302	3300013308	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEG
Ga0163163_125042941	3300014325	Switchgrass Rhizosphere	MLMNAILAVALGLAPVKTDKAVIHYNPRDYAGLIGRYSQSIDKAGVTHLRGFDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0182008_105419111	3300014497	Rhizosphere	MIMNAVLAVALGLTPVKPGVDTQVIQYNSTEYAGLIGRYRQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGTVGETFITFTVSE
Ga0157377_110259431	3300014745	Miscanthus Rhizosphere	MLVNAILAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA*
Ga0132258_1005929810	3300015371	Arabidopsis Rhizosphere	MHMLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDITVRQDGRVEGSVGDTYVTFTVTEAA*
Ga0132257_1037448412	3300015373	Arabidopsis Rhizosphere	MHMLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGITHLRGYDRMTGKPFDIAVR
Ga0163161_105488702	3300017792	Switchgrass Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGITHLRGYDRMTGKPFDIAVRQDGRVEGSVGDTYVTFTLTEAA
Ga0207697_100897433	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA
Ga0207656_106948542	3300025321	Corn Rhizosphere	LNAVLAVALGLAPIKPGQEVQVINYNPSDYAGLIGRYNRSTDRGGTTHLTGFDRVTGRPFDIAVAKDGRVEGTVGETYVAFSVSERA
Ga0207656_107475442	3300025321	Corn Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAELIGRYQQSTDRRGNTHLTGYDRLTGRPFDIAVARDGRVEGTVGETYVTFTVSQAA
Ga0207682_100152162	3300025893	Miscanthus Rhizosphere	MLMNAVLAVALGLAPVKADKAVIHYNPSDYAGMIGRYSQSIDKAGVTHLRGYDRLTGKPFDIAVRQDGRVEGSVGDSYITFTVSEAA
Ga0207682_100585361	3300025893	Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA
Ga0207642_101698812	3300025899	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVGETYITFHVSEA
Ga0207688_100355062	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MLMNAILAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA
Ga0207680_104074071	3300025903	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYITFNVSEGA
Ga0207680_111696471	3300025903	Switchgrass Rhizosphere	VLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGITHLRGYDRMTGKPFDIAVRQDGRVEGSVGDTYVTFTVTEAA
Ga0207647_100194014	3300025904	Corn Rhizosphere	MIMNAVLAVALGLAPVKAGQEVQTIQYNPTEYAGLIGRYQQSTDRRGVTHLRGFDRLTGRPFDIAVASNGQVEGTVGETYITFHVSEA
Ga0207647_100350855	3300025904	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFSVSEAA
Ga0207647_105802372	3300025904	Corn Rhizosphere	MQRPRCEKGSMLMLMNAILAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA
Ga0207647_106652452	3300025904	Corn Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAGLIGRYQQSTDRRGNTHLTGYDRLTGRPFDIAVARDGRVEGTVGETYVTFTVSQAA
Ga0207645_109593171	3300025907	Miscanthus Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQFNPTDYSGLIGRYQQSTDRHGVTHLIGYDRLTGRPFDIAVAKNGQVEGTVGETYVTF
Ga0207643_100883462	3300025908	Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYWGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA
Ga0207654_103991322	3300025911	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA
Ga0207654_107690251	3300025911	Corn Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQFNPTDYSGLIGRYQQSTDRHGVTHLIGYDRLTGRPFDIAVAKNGHVEGTVGETYVTFTVSEGA
Ga0207707_102686513	3300025912	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDG
Ga0207657_101082042	3300025919	Corn Rhizosphere	MILNAVLAVALGLAPIKPGQEVQVINYNPSDYAGLIGRYNRSTDRGGTTHLTGFDRVTGRPFDIAVAKDGRVEGTVGETYVAFSVSERA
Ga0207657_101247732	3300025919	Corn Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA
Ga0207657_103814521	3300025919	Corn Rhizosphere	NAVLAVALGLAPAKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVGETYITFHVSEA
Ga0207649_104378032	3300025920	Corn Rhizosphere	MTPAQRPRCETEYLKMIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAELIGRYQQSTDRRGNTHLTGYDRLTGRPFDIAVARDGRVEGTVGETYVTFTVSQAA
Ga0207650_116155622	3300025925	Switchgrass Rhizosphere	MIMNAVLAVALGLTPVKPGVDTQVIQYNPTEYAGLIGRYQQSTDRRGTTHLTGYDRLTGRPFDIAVRQNGQVEGTVGE
Ga0207687_103412323	3300025927	Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA
Ga0207701_103642282	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLMNAILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA
Ga0207644_1000072915	3300025931	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKTGQEVQVIQVNPSDYAGLIGRYNRTTDRSGNTHLTGFDRVTGRPFDIAVAKDGRVEGTVGNTYVTFTVSQRA
Ga0207644_103561322	3300025931	Switchgrass Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGVTHLRGYDRMTGKPFDITVRQDGRVEGSVGDTYVTFTLTEAA
Ga0207690_106497892	3300025932	Corn Rhizosphere	MIPAQRPRCETEYLKMIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAELIGRYQQSTDRRGNTHLTGYDRLTGRPFDIAVARDGRVEGTVGETYVTFTVSQAA
Ga0207706_100954184	3300025933	Corn Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGITHLRGYDRMTGKPFDIAVRQDGRVEG
Ga0207686_102164371	3300025934	Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVG
Ga0207709_107827551	3300025935	Miscanthus Rhizosphere	MIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTV
Ga0207670_112324292	3300025936	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA
Ga0207691_101124441	3300025940	Miscanthus Rhizosphere	MLMNAILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFARTR
Ga0207691_103721201	3300025940	Miscanthus Rhizosphere	MLMNAVLAVALGLAPVKADRAVIHYNPSDYAGLIGRYSQSTDKAGITHLRGYDRMTGKPFDIAVRQDGRVEGSVGDTYVTFTVTEAA
Ga0207691_104216161	3300025940	Miscanthus Rhizosphere	DNGVFDMIMNAVLAVALGLAPVKAGQEVQTIQYNPTEYAGLIGRYSQSTDRRGVTHLRGFDRVTGRPFDIAVASNGQVEGTVGETYITFHVSEA
Ga0207679_102950502	3300025945	Corn Rhizosphere	MILNAVLAVALGLAPIKPGQEVQVINYNPSDYAGLIGRYNRSTDRGGTTHLTGFDRVTGRPFDIAIAKDGRVEGTVGETYVAFSVSERA
Ga0207651_102884661	3300025960	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEG
Ga0207651_107216162	3300025960	Switchgrass Rhizosphere	MQRPRCEKGSMLMLMNAILAVALGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDITVRQDGRVEGSVGDTYVTFTLTEAA
Ga0207668_110377381	3300025972	Switchgrass Rhizosphere	MQRPRCEKGSMLMLMNAILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA
Ga0207668_121116772	3300025972	Switchgrass Rhizosphere	MIMNAVLAVALGLAPVKPGLETQVIQFNPTDYSGLIGRYQQSTDRHGVTHLIGYDRLTGRPFDIAVAKNGQVEGTVGETYVTFTVSEGA
Ga0207658_107138431	3300025986	Switchgrass Rhizosphere	MQRPRCEKGSMLMLMNAILAVAIGLAPVKADKVVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGYDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA
Ga0207703_118908051	3300026035	Switchgrass Rhizosphere	SGLLQSGMLLEKNSNAAPPLRNGVIDMIMNAVLAVALGLAPVKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA
Ga0207703_122958982	3300026035	Switchgrass Rhizosphere	GTLLEMTPAQRPRCETEYLKMIMNAVLAVALGLAPVKPGLETQVIQVNPTKYAELIGRYQQSTDRHGVTHLIGYDRLTGRPFDIAVAKNGQVEGTVGETYVTFTVSEGA
Ga0207675_1021875451	3300026118	Switchgrass Rhizosphere	VNSNAAPPLRNGVIDMIMNAVLAVALGLAPMKSGQEVQVIQYNPSDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGETYVTFNVSEGA
Ga0207683_103832072	3300026121	Miscanthus Rhizosphere	MLMNAILAVALGLAPVKTDKAVIHYNPSDYAGLIGRYSQSIDKAGVTHLRGFDRMTGKPFDIAVRQDGRVEGSVGDAYVTFTVSEAA
Ga0207698_125124412	3300026142	Corn Rhizosphere	AVLAVALGLAPVKSGQEVQVIQYNPGDYSGLIGRYNQSTDRGGTTHLSGFDRLTGRPFDIAVAKDGRVEGTVGDTYVTFRVSEAA
Ga0308175_1003448502	3300031938	Soil	MILNAVLAVALGLAPINPGQEVQVINYNPSDYAGLIGRYNRSTDRGGTTHLTGFDRVTGRPFDIAVAKDGRVEGTVGETYVAFSVSERA
Ga0308175_1012564442	3300031938	Soil	MIMNAVLAVALGLAPIKPGVDHQVIQYNPTDYAGLIGRYQQSTDRRGVTHLTGYDRLTGRPFDITVASNGRVEGTVGEMYITFNVSEAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051955

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences