Metagenome / Metatranscriptome Family F051447

Basic Information
Family ID	F051447
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	66 residues
Representative Sequence	MCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA
Number of Associated Samples	129
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.25 %
% of genes near scaffold ends (potentially truncated)	35.42 %
% of genes from short scaffolds (< 2000 bps)	78.47 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (64.583 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.750 % of family members)
Environment Ontology (ENVO)	Unclassified (35.417 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.97% β-sheet: 34.33% Coil/Unstructured: 59.70%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF02737	3HCDH_N	31.25
PF00725	3HCDH	13.89
PF00171	Aldedh	8.33
PF00486	Trans_reg_C	5.56
PF13185	GAF_2	2.78
PF00072	Response_reg	2.08
PF12773	DZR	1.39
PF01702	TGT	1.39
PF08240	ADH_N	0.69
PF14261	DUF4351	0.69
PF13280	WYL	0.69
PF13011	LZ_Tnp_IS481	0.69
PF02518	HATPase_c	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	45.14
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	31.25
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	31.25
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	31.25
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	31.25
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	31.25
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	31.25
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	8.33
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	8.33
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	8.33
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	1.39
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	1.39

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.58 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.58 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.58 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.78 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.75 %
Unclassified	root	N/A	35.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.50 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.81 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.69 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.69 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000042\|ARSoilYngRDRAFT_c04688	Not Available	516	Open in IMG/M
3300000953\|JGI11615J12901_11789591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300000956\|JGI10216J12902_101562109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300000956\|JGI10216J12902_102308402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1721	Open in IMG/M
3300003267\|soilL1_10189987	Not Available	1284	Open in IMG/M
3300003319\|soilL2_10057696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2702	Open in IMG/M
3300003324\|soilH2_10162312	Not Available	1244	Open in IMG/M
3300003998\|Ga0055472_10211686	Not Available	600	Open in IMG/M
3300004156\|Ga0062589_100373530	Not Available	1144	Open in IMG/M
3300004157\|Ga0062590_100819739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300004463\|Ga0063356_100763164	Not Available	1342	Open in IMG/M
3300004463\|Ga0063356_101219366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1094	Open in IMG/M
3300005093\|Ga0062594_100089870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1784	Open in IMG/M
3300005294\|Ga0065705_10003678	All Organisms → cellular organisms → Bacteria	5782	Open in IMG/M
3300005332\|Ga0066388_107538930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300005339\|Ga0070660_100589453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300005341\|Ga0070691_10943148	Not Available	535	Open in IMG/M
3300005343\|Ga0070687_101466886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300005345\|Ga0070692_10403214	Not Available	864	Open in IMG/M
3300005353\|Ga0070669_101611980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300005356\|Ga0070674_101301104	Not Available	648	Open in IMG/M
3300005364\|Ga0070673_101251946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300005438\|Ga0070701_10261497	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1049	Open in IMG/M
3300005441\|Ga0070700_101610958	Not Available	555	Open in IMG/M
3300005444\|Ga0070694_100373385	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1110	Open in IMG/M
3300005445\|Ga0070708_101162872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	722	Open in IMG/M
3300005455\|Ga0070663_100340372	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1212	Open in IMG/M
3300005457\|Ga0070662_100084093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2376	Open in IMG/M
3300005530\|Ga0070679_100686242	Not Available	967	Open in IMG/M
3300005535\|Ga0070684_100050670	All Organisms → cellular organisms → Bacteria	3607	Open in IMG/M
3300005544\|Ga0070686_100523129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300005546\|Ga0070696_101122139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300005549\|Ga0070704_100545796	Not Available	1012	Open in IMG/M
3300005549\|Ga0070704_100549249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300005563\|Ga0068855_100898367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300005564\|Ga0070664_100491156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1131	Open in IMG/M
3300005564\|Ga0070664_100677016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	960	Open in IMG/M
3300005577\|Ga0068857_100169227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1986	Open in IMG/M
3300005577\|Ga0068857_100442912	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1214	Open in IMG/M
3300005843\|Ga0068860_102722528	Not Available	513	Open in IMG/M
3300005937\|Ga0081455_10044053	All Organisms → cellular organisms → Bacteria	3897	Open in IMG/M
3300005981\|Ga0081538_10018884	All Organisms → cellular organisms → Bacteria	5153	Open in IMG/M
3300005985\|Ga0081539_10024188	All Organisms → cellular organisms → Bacteria	3951	Open in IMG/M
3300006046\|Ga0066652_101367749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300006237\|Ga0097621_102015588	Not Available	551	Open in IMG/M
3300009094\|Ga0111539_10027719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6919	Open in IMG/M
3300009101\|Ga0105247_10346243	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1044	Open in IMG/M
3300009137\|Ga0066709_101819425	Not Available	853	Open in IMG/M
3300009148\|Ga0105243_12260471	Not Available	581	Open in IMG/M
3300009174\|Ga0105241_10987616	Not Available	787	Open in IMG/M
3300009840\|Ga0126313_10279784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300010037\|Ga0126304_10007780	All Organisms → cellular organisms → Bacteria	5715	Open in IMG/M
3300010038\|Ga0126315_10212821	Not Available	1168	Open in IMG/M
3300010041\|Ga0126312_11184174	Not Available	563	Open in IMG/M
3300010166\|Ga0126306_10004240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8457	Open in IMG/M
3300010166\|Ga0126306_10110587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1999	Open in IMG/M
3300010400\|Ga0134122_10016986	All Organisms → cellular organisms → Bacteria	5444	Open in IMG/M
3300011000\|Ga0138513_100003928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1587	Open in IMG/M
3300012022\|Ga0120191_10029872	Not Available	841	Open in IMG/M
3300012208\|Ga0137376_10027574	All Organisms → cellular organisms → Bacteria	4470	Open in IMG/M
3300012212\|Ga0150985_113144816	Not Available	503	Open in IMG/M
3300012355\|Ga0137369_10020782	Not Available	6198	Open in IMG/M
3300012901\|Ga0157288_10100945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300012902\|Ga0157291_10047451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300012904\|Ga0157282_10119511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300012911\|Ga0157301_10060799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300012938\|Ga0162651_100056475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300013308\|Ga0157375_10525013	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1347	Open in IMG/M
3300014325\|Ga0163163_10775451	Not Available	1022	Open in IMG/M
3300015201\|Ga0173478_10188414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300015371\|Ga0132258_10784913	Not Available	2401	Open in IMG/M
3300015373\|Ga0132257_103228629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300017965\|Ga0190266_10079261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300017997\|Ga0184610_1016537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1938	Open in IMG/M
3300018027\|Ga0184605_10126751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300018028\|Ga0184608_10015725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2667	Open in IMG/M
3300018028\|Ga0184608_10073438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1390	Open in IMG/M
3300018056\|Ga0184623_10009971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4085	Open in IMG/M
3300018061\|Ga0184619_10000501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13445	Open in IMG/M
3300018061\|Ga0184619_10002450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6683	Open in IMG/M
3300018072\|Ga0184635_10008993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3418	Open in IMG/M
3300018077\|Ga0184633_10095200	Not Available	1537	Open in IMG/M
3300018081\|Ga0184625_10105728	Not Available	1456	Open in IMG/M
3300018429\|Ga0190272_10583427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300018466\|Ga0190268_10303449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	960	Open in IMG/M
3300018466\|Ga0190268_10859749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300019356\|Ga0173481_10290785	Not Available	755	Open in IMG/M
3300019361\|Ga0173482_10324403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300021073\|Ga0210378_10308876	Not Available	593	Open in IMG/M
3300021080\|Ga0210382_10446490	Not Available	573	Open in IMG/M
3300022694\|Ga0222623_10067723	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300022694\|Ga0222623_10152719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300022756\|Ga0222622_10100865	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1775	Open in IMG/M
3300022883\|Ga0247786_1002689	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3341	Open in IMG/M
3300023064\|Ga0247801_1062937	Not Available	584	Open in IMG/M
3300023266\|Ga0247789_1020335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1111	Open in IMG/M
3300025918\|Ga0207662_10297388	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1072	Open in IMG/M
3300025919\|Ga0207657_10769368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300025921\|Ga0207652_11836225	Not Available	511	Open in IMG/M
3300025922\|Ga0207646_10917594	Not Available	776	Open in IMG/M
3300025927\|Ga0207687_10155992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1747	Open in IMG/M
3300025932\|Ga0207690_10109823	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1984	Open in IMG/M
3300025938\|Ga0207704_11663448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300025941\|Ga0207711_10743848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300026078\|Ga0207702_10911139	Not Available	871	Open in IMG/M
3300026116\|Ga0207674_11786497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300026799\|Ga0207485_102570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300027614\|Ga0209970_1093061	Not Available	573	Open in IMG/M
3300027907\|Ga0207428_10388058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300028596\|Ga0247821_10711494	Not Available	656	Open in IMG/M
3300028710\|Ga0307322_10043253	Not Available	1087	Open in IMG/M
3300028711\|Ga0307293_10023320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1838	Open in IMG/M
3300028717\|Ga0307298_10042321	Not Available	1235	Open in IMG/M
3300028718\|Ga0307307_10011710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2338	Open in IMG/M
3300028719\|Ga0307301_10068229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300028768\|Ga0307280_10071602	Not Available	1116	Open in IMG/M
3300028771\|Ga0307320_10000807	All Organisms → cellular organisms → Bacteria	11282	Open in IMG/M
3300028784\|Ga0307282_10008191	Not Available	4153	Open in IMG/M
3300028796\|Ga0307287_10047785	Not Available	1566	Open in IMG/M
3300028807\|Ga0307305_10110577	Not Available	1269	Open in IMG/M
3300028814\|Ga0307302_10371609	Not Available	706	Open in IMG/M
3300028819\|Ga0307296_10001220	All Organisms → cellular organisms → Bacteria	12849	Open in IMG/M
3300028824\|Ga0307310_10018630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2709	Open in IMG/M
3300028876\|Ga0307286_10005264	All Organisms → cellular organisms → Bacteria	3858	Open in IMG/M
3300028881\|Ga0307277_10000583	All Organisms → cellular organisms → Bacteria	13618	Open in IMG/M
3300028881\|Ga0307277_10148457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015	Open in IMG/M
3300030336\|Ga0247826_10095704	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300030336\|Ga0247826_10629934	Not Available	826	Open in IMG/M
3300031548\|Ga0307408_100167742	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300031548\|Ga0307408_100232683	Not Available	1510	Open in IMG/M
3300031548\|Ga0307408_101084865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300031731\|Ga0307405_10499762	Not Available	974	Open in IMG/M
3300031854\|Ga0310904_10170648	Not Available	1284	Open in IMG/M
3300031892\|Ga0310893_10571760	Not Available	514	Open in IMG/M
3300031901\|Ga0307406_10031198	All Organisms → cellular organisms → Bacteria	3243	Open in IMG/M
3300031903\|Ga0307407_11164235	Not Available	601	Open in IMG/M
3300031938\|Ga0308175_100069724	All Organisms → cellular organisms → Bacteria	3126	Open in IMG/M
3300031944\|Ga0310884_10110871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1360	Open in IMG/M
3300032002\|Ga0307416_100483290	Not Available	1299	Open in IMG/M
3300032002\|Ga0307416_100657316	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1133	Open in IMG/M
3300033407\|Ga0214472_10138277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2393	Open in IMG/M
3300033550\|Ga0247829_10271284	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1370	Open in IMG/M
3300034664\|Ga0314786_046145	Not Available	807	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.75%
Host-Associated	Host-Associated	31.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.64%
Plants	Host-Associated → Plants	31.25%
Aquatic	Environmental → Aquatic	11.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.42%
Sediment	Environmental → Aquatic → Sediment	9.03%
Roots	Host-Associated → Plants → Roots	2.08%
Freshwater	Environmental → Aquatic → Freshwater	1.39%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.39%
Marine	Environmental → Aquatic → Marine	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.44%
Loam	Environmental → Terrestrial → Soil → Loam	11.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.08%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.08%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.39%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.39%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.39%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.39%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.86%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.08%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.08%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.08%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.08%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.08%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.39%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.39%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000042	Arabidopsis rhizosphere soil microbial communities from the University of North Carolina - sample from Arabidopsis soil young	Host-Associated	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026799	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06.2A2a-12 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARSoilYngRDRAFT_046882	3300000042	Arabidopsis Rhizosphere	MCAVCRRNLLAGESFRTWQVRHDHSAGRIVCLLCEREAAQEGWQRSSDPLRHENAVGLRGSVRRVA*
JGI11615J12901_117895912	3300000953	Soil	VTMCAVCRRNLLAGESFRTWQIRHERTGGRIVCLLCETEAVREGWQRSGDPLRHENATGLRGSVRRVA*
JGI10216J12902_1015621093	3300000956	Soil	MCAVCRRNLLAGERFRYWRSREDRPTGRVVCFLCEREAARDGWLRDNQDASHENAVGLRNSVRRVA*
JGI10216J12902_1023084023	3300000956	Soil	VNPVRPGTYHVRAVTMCAVCRRNLLAGERFRHWRPREDRPTGRVVCFLCEREAARDGWLRDDQDVSQENAVGLRNSVRRVA*
soilL1_101899873	3300003267	Sugarcane Root And Bulk Soil	MCAVCRRNLLAGESFRYWRAREEGPGGRVVCLLCERNAAQEGWQKSSEPPRHENANGLLRNSVRRVA*
soilL2_100576963	3300003319	Sugarcane Root And Bulk Soil	VTMCAVCRRNLLAGESFRTWQVRHDHSAGRIVCLLCEREAAQEGWQRSRDPLRHENAVGLRGSVRRVA*
soilH2_101623121	3300003324	Sugarcane Root And Bulk Soil	VTMCAVCRRNLLAGESFRTWQVRHDHSAGRIVCLLCEREAAQEGWQRSSDPLRHENAVGLRGSVRRVA*
Ga0055472_102116862	3300003998	Natural And Restored Wetlands	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCERDAAREGWQRSGNALRHENATGLRGSVRRVA*
Ga0062589_1003735301	3300004156	Soil	SPVTMCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0062590_1008197392	3300004157	Soil	MCAVCRRNLLAGESFRTWQVRHEQTGGRIVCLLCETDAAREGWQRSGDPLRHENAVGLRGSVRRVA*
Ga0063356_1007631642	3300004463	Arabidopsis Thaliana Rhizosphere	MCVVCRRNLLAGESYRYWRTRRDQPSGRVVCFLCEAEAVREGWLRDSRQAGHENAMGLRNSVRRVA*
Ga0063356_1012193662	3300004463	Arabidopsis Thaliana Rhizosphere	MCAVCRRNLLAGESFRTWQVRHEQTGGRIVCLLCETEAAREGWQRSADPLRHENAVGLRGSVRRVA*
Ga0062594_1000898703	3300005093	Soil	VTMCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCEHDAAREGWQRSGDPLRHEN
Ga0065705_100036787	3300005294	Switchgrass Rhizosphere	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGSTLRHENATGLRGSVRRVA*
Ga0066388_1075389301	3300005332	Tropical Forest Soil	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHDAAREGWRRSDDPLRQENAVGLRGSVRRVA*
Ga0070660_1005894531	3300005339	Corn Rhizosphere	VTMCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVG
Ga0070691_109431482	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MCRRNLLAGESFRTWQVRHDHSAGRIVCLLCEREAAQEGWQRSSDPLRHENAVGLRGSVRRVA*
Ga0070687_1014668862	3300005343	Switchgrass Rhizosphere	MCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSV
Ga0070692_104032141	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0070669_1016119801	3300005353	Switchgrass Rhizosphere	VTMCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCEHDAAREGWQRSGDPLRHENAVGLRNTVRRVA*
Ga0070674_1013011041	3300005356	Miscanthus Rhizosphere	GESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0070673_1012519462	3300005364	Switchgrass Rhizosphere	MCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSV
Ga0070701_102614971	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHDAAREGWLRSGDPLRHEN
Ga0070700_1016109582	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0070694_1003733852	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LLAGESFRTWQVRHERTAGRIVCLLCEHEAVREGWLRSGDPLRHENAVGLRGSVRR
Ga0070708_1011628722	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTMCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEATREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0070663_1003403722	3300005455	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0070662_1000840932	3300005457	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEATREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0070679_1006862421	3300005530	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEATREGWLRSGDPLRHENAAGFEDPFAESA*
Ga0070684_1000506706	3300005535	Corn Rhizosphere	QSPVTMCAVCRRNLLAGESFLTWQVRHDHSAGRIVCLLCEREAAQEGWQRSSDPLRHENAVGLRGSVRRVA*
Ga0070686_1005231291	3300005544	Switchgrass Rhizosphere	VTMCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHEN
Ga0070696_1011221392	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0070704_1005457961	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ARLFQLRDVGPTSGLRPTILERVTMCAVCRRNLLAGERFRYWRSRLDRPSGRVVCFLCEREAIRDGWLRDDQHASHENAMGLGNSVRRVA*
Ga0070704_1005492492	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCEHDAAREGWQRSGDPLRHENAVGLRNTVRRVA*
Ga0068855_1008983671	3300005563	Corn Rhizosphere	MCAMCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0070664_1004911562	3300005564	Corn Rhizosphere	VTMCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVR
Ga0070664_1006770162	3300005564	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVGLRGSVR
Ga0068857_1001692272	3300005577	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHDAAREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0068857_1004429123	3300005577	Corn Rhizosphere	MCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRV
Ga0068860_1027225282	3300005843	Switchgrass Rhizosphere	QSPVTMCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHDAAREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0081455_100440534	3300005937	Tabebuia Heterophylla Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTGGRIVCLLCERDAAREGWLRSGDPLRQENAVGLRGSVRRVA*
Ga0081538_100188845	3300005981	Tabebuia Heterophylla Rhizosphere	MCAVCRRNLLAGESFRFWRARTDRPTRIVCFLCEREAAHEGWFRDARRPQHENAVGLRNSVRRVA*
Ga0081539_100241885	3300005985	Tabebuia Heterophylla Rhizosphere	MCVVCRRNLLAGESYRYWRSRHDQPLGRVVCFLCESEAARDGWRRDSRQAGHENAMGLRNSVRRVA*
Ga0066652_1013677492	3300006046	Soil	VTSGVRPTILERVTMCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCERDAIREGWLRDDQHTSHENAMGLGNSVRRVA*
Ga0082029_10074652	3300006169	Termite Nest	MCAVCRRNLLAGESFRTWQVRHERTSGRIVCFLCEHEAAREGWQRSGDPLRHEN
Ga0097621_1020155881	3300006237	Miscanthus Rhizosphere	NLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0111539_100277192	3300009094	Populus Rhizosphere	MCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGSTLRHENATGLRGSVRRVA*
Ga0105247_103462431	3300009101	Switchgrass Rhizosphere	MCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATG
Ga0066709_1018194251	3300009137	Grasslands Soil	AQERAGLLQLRDVAVTSGVRPTILERVTMCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCGRDAIGEGWLRDDQHTSHENAMGLGNSVRRVA*
Ga0105243_122604712	3300009148	Miscanthus Rhizosphere	CAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0105241_109876161	3300009174	Corn Rhizosphere	PVTMCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0126313_102797842	3300009840	Serpentine Soil	VTMCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDQRRPSHENAVGLRNSVRRVA*
Ga0126304_100077808	3300010037	Serpentine Soil	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCEREATREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0126315_102128211	3300010038	Serpentine Soil	DLRAVTMCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDPRRLSHENAVGLRNSVRRVA*
Ga0126312_111841742	3300010041	Serpentine Soil	TMCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSVRRVA*
Ga0126306_100042406	3300010166	Serpentine Soil	MCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDPRRLSHENAVGLRNSVRRVA*
Ga0126306_101105874	3300010166	Serpentine Soil	MCAVCRRNLLAGESYRYWRSRRDQPLGRIVCFLCESEAVREGWMRDPRQAGHENAMGLRNSVRRVA*
Ga0134122_100169863	3300010400	Terrestrial Soil	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAVREGWLRSGDLLRHENAVGLRGSVRRVA*
Ga0138513_1000039282	3300011000	Soil	MCAVCRRNLLAGESYRYWRMRRDQPSGRVVCFLCEAEAVREGWMRDSRQAGHENAVGLRNSVRRVA*
Ga0120191_100298722	3300012022	Terrestrial	MCAVCRRNLLAGESYRYWRVRRDQAMGRVVCFLCEAEAVREGWLRDPRQAVHENAMGLRNSVRRVA*
Ga0137376_100275744	3300012208	Vadose Zone Soil	MCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCERDAIREGWLRDDQHTSHENAMGLGNSVRRVA*
Ga0150985_1131448162	3300012212	Avena Fatua Rhizosphere	DLCAMCRRNLLAGESFRYWRVRRNEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0137369_100207829	3300012355	Vadose Zone Soil	MCAVCRRNLLAGESYRYWRARWDLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSVRRVA*
Ga0157288_101009452	3300012901	Soil	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAVREGWLRSGDPLRHENAVRLRGSVRRVA*
Ga0157291_100474511	3300012902	Soil	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWSRSADPLRHENA
Ga0157282_101195112	3300012904	Soil	MCAVCRRNLLAGESFRHWQVRRHEGPGGRIVCLLCEGEAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0157301_100607992	3300012911	Soil	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWSRSADPLRHENAVGLRGSVRRVA*
Ga0162651_1000564752	3300012938	Soil	MCAVCRRNLLAGESFRYWQVRRLEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0157375_105250132	3300013308	Miscanthus Rhizosphere	MCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0163163_107754511	3300014325	Switchgrass Rhizosphere	QSPVTMCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0173478_101884141	3300015201	Soil	MCAVCRRNLLAGESFRYWQVRRNEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA*
Ga0132258_107849131	3300015371	Arabidopsis Rhizosphere	LAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVGLRGSVRRVA*
Ga0132257_1032286291	3300015373	Arabidopsis Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAVREGWLRSGDPLRHENAV
Ga0190266_100792613	3300017965	Soil	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGSTLRHENATGLRGSVRRVA
Ga0184610_10165372	3300017997	Groundwater Sediment	VRSRPNRLLPSKSVTMCALCRRNLLAGERFRYWRAGTGRTPGRVVCFLCEREAALGGWERSDRLTGVENAVGLRSSVRRVA
Ga0184605_101267513	3300018027	Groundwater Sediment	MRAVTMCVVCRRNLLAGESYRFWRARRDQLSGRVVCFLCESEAAREGWMRDPRQVGQENAVGLRNSVRRVA
Ga0184608_100157253	3300018028	Groundwater Sediment	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0184608_100734383	3300018028	Groundwater Sediment	MCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESQAAREGWMRDPRRPSHENAVGLRNSVRRVA
Ga0184623_100099714	3300018056	Groundwater Sediment	MCALCRRNLLAGERFRYWRAGTGRTPGRVVCFLCEREAALGGWERSDRLTGVENAVGLRSSVRRVA
Ga0184619_1000050110	3300018061	Groundwater Sediment	MCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSVRRVA
Ga0184619_100024505	3300018061	Groundwater Sediment	MRAVTMCVVCRRNLLAGESYRFWRARRDQPSGRVVCFLCESEAAREGWMRDPRRPGHENAVGLRNSVRRVA
Ga0184635_100089933	3300018072	Groundwater Sediment	MCAVCRRNLLAGESYRYWRMRRDQPSGRVVCFLCEAEAVREGWMRDSRQAGHENAVGLRNSVRRVA
Ga0184633_100952001	3300018077	Groundwater Sediment	MCALCRRNLLAGERFRYWRAGTGRTPGRVVCFLCEREAALGGWQRSDRLTGVENAVGLRSSVRRVA
Ga0184625_101057282	3300018081	Groundwater Sediment	VTMCAVCRRNLLAGESYRYWRMRRDQPSGRVVCFLCEAEAVREGWMRDSRQAGHENAVGLRNSVRRVA
Ga0190272_105834272	3300018429	Soil	VTMCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSVRRVA
Ga0190268_103034492	3300018466	Soil	MCALCRRNLLAGERFRYWRPGIGRTPGRVVCFLCEREAALGGWQRSERLTGVENAVGLRSSVRRVA
Ga0190268_108597492	3300018466	Soil	VTMCAVCRRNLLAGESYRYWRARWDLPLGRVVCFLCESEAAREGWMRDARRPSHENAVGLRNSVRRVA
Ga0173481_102907853	3300019356	Soil	CAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAVREGWLRSGDPLRHENAVGLRGSVRRVA
Ga0173482_103244032	3300019361	Soil	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVGLRGSVRRVA
Ga0210378_103088762	3300021073	Groundwater Sediment	VTMCAVCRRNLLAGESYRYWRARQGLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSVRRVA
Ga0210382_104464901	3300021080	Groundwater Sediment	RRNLLAGESYRYWRARWDLPSGRVVCFLCESEAARGGWMRDPRRPSHENAVGLRNSVRRV
Ga0222623_100677231	3300022694	Groundwater Sediment	MCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSV
Ga0222623_101527192	3300022694	Groundwater Sediment	VTMCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESQAAREGWMRDPRRPSHENAVGLRNSVRRVA
Ga0222622_101008653	3300022756	Groundwater Sediment	MCAVCRRNLLAGESFRYWQVRRYEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0247786_10026893	3300022883	Soil	VTMCAVCRRNLLAGESFRHWQVRRHEGPGGRIVCLLCEGEAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0247801_10629372	3300023064	Soil	MCAVCRRNLLAGESFRHWQVRRHEGPGGRIVCLLCEGEAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0247789_10203352	3300023266	Soil	MCAVCRRNLLAGESFRTWQVRHDHSAGRIVCLLCEREAAQEGWQRSSDPLRHENAVGLRGSVRRVA
Ga0207662_102973882	3300025918	Switchgrass Rhizosphere	MCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCEHDAAREGWQRSGDPLRHEN
Ga0207657_107693681	3300025919	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAAREGWLRSGDPLRHENAVGLRG
Ga0207652_118362252	3300025921	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEATREGWLRSGDPLRHENAVGLRGSVRRVA
Ga0207646_109175942	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTMCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCEHDAAREGWQRSGDPLRHENAVGLRNTVRRVA
Ga0207687_101559921	3300025927	Miscanthus Rhizosphere	MCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0207690_101098233	3300025932	Corn Rhizosphere	MCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0207704_116634482	3300025938	Miscanthus Rhizosphere	MCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCEHDAAREGWQRSGDPLRHENAVGLRNTVRRVA
Ga0207711_107438481	3300025941	Switchgrass Rhizosphere	VTMCAMCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENAT
Ga0207702_109111391	3300026078	Corn Rhizosphere	DQSPVTMCAVCRRNLLAGESFRYWQIRRHEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0207674_117864972	3300026116	Corn Rhizosphere	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHDAAREGWLRSGDPLRHENAVGLRGSVRRVA
Ga0207485_1025702	3300026799	Soil	MCAVCRRNLLAGESFRTWQVRHERTAGRIVCLLCEHEAVREGWLRSGDPLRHENAVGLRGSVRRVA
Ga0209970_10930611	3300027614	Arabidopsis Thaliana Rhizosphere	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRG
Ga0207428_103880582	3300027907	Populus Rhizosphere	MCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEATREGWQRSGSTLRHENATGLRGSVRRVA
Ga0247821_107114943	3300028596	Soil	PVTMCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCERDAAREGWQRSGDPLRHENAVGLRNTVRRVA
Ga0307322_100432533	3300028710	Soil	VTMCAMCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0307293_100233203	3300028711	Soil	MCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCEREAIREGWLRDDQRASHENAMGLRNSVRRVA
Ga0307298_100423214	3300028717	Soil	SLTSERGPSMLERVTMCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCEREAIREGWLRDDQRASHENAMGLRNSVRRVA
Ga0307307_100117101	3300028718	Soil	MCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCEREAIREGWLRDDQRASHENAM
Ga0307301_100682292	3300028719	Soil	VTMCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESQAAREGWMRDPRRPSHENAV
Ga0307280_100716023	3300028768	Soil	PTSERGPSMLERVTMCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCEREAIREGWLRDDQRASHENAMGLRNSVRRVA
Ga0307320_1000080714	3300028771	Soil	VTMCAVCRRNLLAGESFRYWQVRRYEGPGGRIVCLLCESEAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0307282_100081917	3300028784	Soil	GPVLDPTSERGPSMLERVTMCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCEREAIREGWLRDDQRASHENAMGLRNSVRRVA
Ga0307287_100477852	3300028796	Soil	MCAVCRRNLLAGESYRYWRMRRDQPSGRVVCFLCEAEAVREWWMRDSRQAGHENAVGLRNSVRRVA
Ga0307305_101105774	3300028807	Soil	MCAVCRRNLLAGERFRYWRARLDRPSGRVVCFLCEREAIREGWLRDDQHTSHENAMGLGNSVRRVA
Ga0307302_103716092	3300028814	Soil	VTMCAVCRRNLLAGESYRYWRARTDQPLGRVVCFLCESEAAREGWMRDPRQVGQENAVGLRNSVRRVA
Ga0307296_100012201	3300028819	Soil	RNLLAGERFRYWRARLDRPSGRVVCFLCEREAIREGWLRDDQRASHENAMGLRNSVRRVA
Ga0307310_100186302	3300028824	Soil	MCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWVRDPRRPSHENAVGLRNSVRRVA
Ga0307286_100052645	3300028876	Soil	MCAVCRRNLLAGESYRYWRMRRDQPSGRVVCFLCEAEAVREGWMRDSRQAGHENAVCLRNSVRRVA
Ga0307277_100005834	3300028881	Soil	MCAVCRRNLLAGESYRYWRARTDQPLGRVVCFLCESEAAREGWMRDPRQVGQENAVGLRNSVRRVA
Ga0307277_101484571	3300028881	Soil	MRAVTMCVVCRRNLLAGESYRFWRARRDQLSGRVVCFLCESEAAREGWMRDPRRPGHENAVGLRNSV
Ga0247826_100957041	3300030336	Soil	MCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRSGSTLRHENATGLRGSVRRVA
Ga0247826_106299342	3300030336	Soil	MCAVCRRNLLAGESFRHWQVRHEGPGGRIVCLLCERDAAREGWQRSGDPLRHENAVGLRNTVRRVA
Ga0307408_1001677424	3300031548	Rhizosphere	MCAVCRRNLLAGESFRYWQVRRHDGPGGRIVCLLCESDAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0307408_1002326834	3300031548	Rhizosphere	MCAMCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCEREATREGWQRSGDPLRHENATGLRGSVRRVA
Ga0307408_1010848652	3300031548	Rhizosphere	VTMCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDTRRPSHENAVGLRNSVRRVA
Ga0307405_104997623	3300031731	Rhizosphere	CRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSVRRVA
Ga0310904_101706484	3300031854	Soil	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRTGDPLRHENATGLRGSVRRVA
Ga0310893_105717601	3300031892	Soil	RRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRTGDPLRHENATGLRGSVRRVA
Ga0307406_100311983	3300031901	Rhizosphere	MCAVCRRNLLAGESYRYWRARRDLPSGRVVCFLCESEAAREGWMRDTRRPSHENAVGLRNSVRRVA
Ga0307407_111642352	3300031903	Rhizosphere	VTMCAVCRRNLLAGESYRYWRTRRDLPSGRVVCFLCESEAAREGWMRDTRRPSHENAVGLRNSVRRVA
Ga0308175_1000697245	3300031938	Soil	MCAMCRRNLLAGESFRYWQVRRNEGPGGRIVCLLCEREAAREGWQRSGDPLRHENATGLRGSVRRVA
Ga0310884_101108712	3300031944	Soil	VTMCAVCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCESEATREGWQRSGSTLRHENATGLRGSVRRVA
Ga0307416_1004832904	3300032002	Rhizosphere	RRNLLAGESYRYWRTRRDLPSGRVVCFLCESEAAREGWMRDPRRPSHENAVGLRNSVRRV
Ga0307416_1006573161	3300032002	Rhizosphere	VTMCAMCRRNLLAGESFRYWQVRRHEGPGGRIVCLLCEREATREGWQRSGDPLRHENATGLRGSVR
Ga0214472_101382774	3300033407	Soil	MCALCRRNLLAGERFRYWRAGTGRTPGRVVCFLCERDAALGGWQRSDRLSGAENAIGLRASVRRVA
Ga0247829_102712843	3300033550	Soil	MCAVCRRNLLAGESFRHWQVRHESPGGRIVCLLCERDAAREGWQRSGDPLRHENAVGLRNTVRRVA
Ga0314786_046145_629_805	3300034664	Soil	LAGESFRYWQVRRHEGPGGRIVCLLCESEAAREGWQRTGDPLRHENATGLRGSVRRVA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051447

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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