Metagenome Family F051426

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F051426
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	63 residues
Representative Sequence	DHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRG
Number of Associated Samples	76
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.69 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (67.361 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.667 % of family members)
Environment Ontology (ENVO)	Unclassified (76.389 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.417 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.86% β-sheet: 0.00% Coil/Unstructured: 51.14%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF07045	DUF1330	3.47
PF03401	TctC	3.47
PF03734	YkuD	2.78
PF04392	ABC_sub_bind	2.08
PF00578	AhpC-TSA	1.39
PF04191	PEMT	1.39
PF00589	Phage_integrase	1.39
PF12697	Abhydrolase_6	1.39
PF04377	ATE_C	1.39
PF07883	Cupin_2	0.69
PF11159	DUF2939	0.69
PF00355	Rieske	0.69
PF12146	Hydrolase_4	0.69
PF14559	TPR_19	0.69
PF09933	DUF2165	0.69
PF07681	DoxX	0.69
PF00353	HemolysinCabind	0.69
PF00582	Usp	0.69
PF00072	Response_reg	0.69
PF00188	CAP	0.69
PF01541	GIY-YIG	0.69
PF08811	DUF1800	0.69
PF08238	Sel1	0.69
PF13481	AAA_25	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.47
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	3.47
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.78
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.08
COG2935	Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.39
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.69
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.69
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.69
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
All Organisms	root	All Organisms	32.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
cellular organisms	root	All Organisms → cellular organisms	32.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.44 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.50 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.47 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	0.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	4.17 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.08 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.69 %
Aurantimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas	0.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3.47 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.39 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.69 %
unclassified Aurantimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas	0.69 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3.47 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1.39 %
Aurantimonas sp. HBX-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas → Aurantimonas sp. HBX-1	0.69 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.69 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000816\|AF_2010_repII_A10DRAFT_1015030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	814	Open in IMG/M
3300005332\|Ga0066388_100762849	Not Available	1565	Open in IMG/M
3300005332\|Ga0066388_103170261	Not Available	840	Open in IMG/M
3300005332\|Ga0066388_104293855	Not Available	726	Open in IMG/M
3300005332\|Ga0066388_104946123	Not Available	677	Open in IMG/M
3300005436\|Ga0070713_101787000	Not Available	597	Open in IMG/M
3300005764\|Ga0066903_100739388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1744	Open in IMG/M
3300005764\|Ga0066903_101257238	Not Available	1379	Open in IMG/M
3300005764\|Ga0066903_101595083	Not Available	1237	Open in IMG/M
3300005764\|Ga0066903_104259682	Not Available	765	Open in IMG/M
3300005764\|Ga0066903_105234667	Not Available	686	Open in IMG/M
3300005764\|Ga0066903_105506457	Not Available	667	Open in IMG/M
3300005764\|Ga0066903_108805208	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300006102\|Ga0075015_100076451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1640	Open in IMG/M
3300006172\|Ga0075018_10379985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300006804\|Ga0079221_10233781	Not Available	1032	Open in IMG/M
3300010360\|Ga0126372_12803990	Not Available	539	Open in IMG/M
3300010361\|Ga0126378_11211356	Not Available	853	Open in IMG/M
3300010361\|Ga0126378_13202320	Not Available	521	Open in IMG/M
3300010362\|Ga0126377_12022941	Not Available	652	Open in IMG/M
3300010376\|Ga0126381_103202216	Not Available	647	Open in IMG/M
3300010376\|Ga0126381_104149260	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300010398\|Ga0126383_10704086	Not Available	1088	Open in IMG/M
3300015372\|Ga0132256_103106449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300016270\|Ga0182036_10383298	Not Available	1091	Open in IMG/M
3300016270\|Ga0182036_10652011	Not Available	848	Open in IMG/M
3300016270\|Ga0182036_10760545	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300016294\|Ga0182041_10103248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2099	Open in IMG/M
3300016294\|Ga0182041_10167115	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300016294\|Ga0182041_10177994	Not Available	1672	Open in IMG/M
3300016319\|Ga0182033_11610947	Not Available	587	Open in IMG/M
3300016319\|Ga0182033_12198451	Not Available	503	Open in IMG/M
3300016341\|Ga0182035_10561108	Not Available	982	Open in IMG/M
3300016341\|Ga0182035_11099106	Not Available	707	Open in IMG/M
3300016341\|Ga0182035_11874256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas → Aurantimonas sp. HBX-1	544	Open in IMG/M
3300016357\|Ga0182032_10148357	Not Available	1732	Open in IMG/M
3300016357\|Ga0182032_11842974	Not Available	529	Open in IMG/M
3300016371\|Ga0182034_10500799	Not Available	1013	Open in IMG/M
3300016371\|Ga0182034_11100306	Not Available	689	Open in IMG/M
3300016371\|Ga0182034_11716763	Not Available	552	Open in IMG/M
3300016371\|Ga0182034_12061081	Not Available	504	Open in IMG/M
3300016387\|Ga0182040_11001383	Not Available	697	Open in IMG/M
3300016404\|Ga0182037_11309750	Not Available	639	Open in IMG/M
3300016404\|Ga0182037_11533406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300016404\|Ga0182037_11656284	Not Available	570	Open in IMG/M
3300016422\|Ga0182039_10168041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1718	Open in IMG/M
3300016422\|Ga0182039_10512586	Not Available	1037	Open in IMG/M
3300016422\|Ga0182039_10867748	Not Available	804	Open in IMG/M
3300016422\|Ga0182039_10882430	Not Available	798	Open in IMG/M
3300016422\|Ga0182039_11029649	Not Available	739	Open in IMG/M
3300016422\|Ga0182039_11328142	Not Available	652	Open in IMG/M
3300016422\|Ga0182039_11811142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300016445\|Ga0182038_11015776	Not Available	735	Open in IMG/M
3300016445\|Ga0182038_11837225	Not Available	547	Open in IMG/M
3300017959\|Ga0187779_10032719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2995	Open in IMG/M
3300017959\|Ga0187779_11278533	Not Available	519	Open in IMG/M
3300018060\|Ga0187765_10236845	Not Available	1070	Open in IMG/M
3300018060\|Ga0187765_10599378	Not Available	711	Open in IMG/M
3300020581\|Ga0210399_10501499	Not Available	1009	Open in IMG/M
3300021560\|Ga0126371_13877667	Not Available	504	Open in IMG/M
3300025898\|Ga0207692_10780502	Not Available	624	Open in IMG/M
3300027680\|Ga0207826_1131855	Not Available	684	Open in IMG/M
3300031545\|Ga0318541_10294812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	903	Open in IMG/M
3300031561\|Ga0318528_10323338	Not Available	828	Open in IMG/M
3300031561\|Ga0318528_10493336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	658	Open in IMG/M
3300031573\|Ga0310915_10771198	Not Available	677	Open in IMG/M
3300031573\|Ga0310915_10953921	Not Available	600	Open in IMG/M
3300031573\|Ga0310915_11045555	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031668\|Ga0318542_10042622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2024	Open in IMG/M
3300031679\|Ga0318561_10426150	Not Available	729	Open in IMG/M
3300031682\|Ga0318560_10412331	Not Available	731	Open in IMG/M
3300031719\|Ga0306917_11410936	Not Available	537	Open in IMG/M
3300031719\|Ga0306917_11463479	Not Available	526	Open in IMG/M
3300031724\|Ga0318500_10136802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300031736\|Ga0318501_10237353	Not Available	962	Open in IMG/M
3300031744\|Ga0306918_10332254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1176	Open in IMG/M
3300031744\|Ga0306918_10803579	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031744\|Ga0306918_10931336	Not Available	676	Open in IMG/M
3300031754\|Ga0307475_10308475	Not Available	1271	Open in IMG/M
3300031763\|Ga0318537_10067705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1307	Open in IMG/M
3300031764\|Ga0318535_10340402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	671	Open in IMG/M
3300031768\|Ga0318509_10086979	Not Available	1666	Open in IMG/M
3300031768\|Ga0318509_10685207	Not Available	569	Open in IMG/M
3300031771\|Ga0318546_11216218	Not Available	529	Open in IMG/M
3300031796\|Ga0318576_10361514	Not Available	686	Open in IMG/M
3300031797\|Ga0318550_10004774	All Organisms → cellular organisms → Bacteria → Proteobacteria	4784	Open in IMG/M
3300031820\|Ga0307473_10102590	Not Available	1527	Open in IMG/M
3300031833\|Ga0310917_10183004	Not Available	1396	Open in IMG/M
3300031879\|Ga0306919_10145975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1721	Open in IMG/M
3300031879\|Ga0306919_11074093	Not Available	614	Open in IMG/M
3300031890\|Ga0306925_11444836	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031893\|Ga0318536_10307697	Not Available	804	Open in IMG/M
3300031894\|Ga0318522_10419319	Not Available	507	Open in IMG/M
3300031897\|Ga0318520_10635262	Not Available	665	Open in IMG/M
3300031910\|Ga0306923_11771616	Not Available	635	Open in IMG/M
3300031910\|Ga0306923_12428716	Not Available	519	Open in IMG/M
3300031912\|Ga0306921_10260930	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300031912\|Ga0306921_10957200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300031912\|Ga0306921_12206005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300031941\|Ga0310912_10290546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1264	Open in IMG/M
3300031941\|Ga0310912_10427271	Not Available	1032	Open in IMG/M
3300031942\|Ga0310916_10918094	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300031945\|Ga0310913_11195725	Not Available	529	Open in IMG/M
3300031946\|Ga0310910_11163526	Not Available	599	Open in IMG/M
3300031947\|Ga0310909_10264137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1439	Open in IMG/M
3300031947\|Ga0310909_10275920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1407	Open in IMG/M
3300031947\|Ga0310909_10524525	Not Available	992	Open in IMG/M
3300031947\|Ga0310909_11535388	Not Available	529	Open in IMG/M
3300031954\|Ga0306926_10490404	All Organisms → cellular organisms → Bacteria → Proteobacteria	1511	Open in IMG/M
3300031954\|Ga0306926_10646219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300031954\|Ga0306926_10664880	Not Available	1266	Open in IMG/M
3300031954\|Ga0306926_11349087	Not Available	830	Open in IMG/M
3300031954\|Ga0306926_11593660	Not Available	749	Open in IMG/M
3300031954\|Ga0306926_12429358	Not Available	577	Open in IMG/M
3300031954\|Ga0306926_12925032	Not Available	512	Open in IMG/M
3300031981\|Ga0318531_10085262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1379	Open in IMG/M
3300031981\|Ga0318531_10091505	Not Available	1333	Open in IMG/M
3300031981\|Ga0318531_10580615	Not Available	508	Open in IMG/M
3300032001\|Ga0306922_10986357	Not Available	870	Open in IMG/M
3300032010\|Ga0318569_10493077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	571	Open in IMG/M
3300032035\|Ga0310911_10257507	Not Available	1000	Open in IMG/M
3300032035\|Ga0310911_10352611	Not Available	850	Open in IMG/M
3300032035\|Ga0310911_10529187	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032043\|Ga0318556_10596497	Not Available	576	Open in IMG/M
3300032044\|Ga0318558_10278725	Not Available	825	Open in IMG/M
3300032052\|Ga0318506_10480533	Not Available	551	Open in IMG/M
3300032059\|Ga0318533_10167845	Not Available	1560	Open in IMG/M
3300032060\|Ga0318505_10208015	Not Available	917	Open in IMG/M
3300032063\|Ga0318504_10515670	Not Available	573	Open in IMG/M
3300032068\|Ga0318553_10009820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4159	Open in IMG/M
3300032076\|Ga0306924_10252916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2023	Open in IMG/M
3300032076\|Ga0306924_10649516	Not Available	1189	Open in IMG/M
3300032076\|Ga0306924_11478992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	721	Open in IMG/M
3300032076\|Ga0306924_12205718	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032076\|Ga0306924_12459453	Not Available	523	Open in IMG/M
3300032090\|Ga0318518_10424380	Not Available	682	Open in IMG/M
3300032261\|Ga0306920_100232441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2751	Open in IMG/M
3300032261\|Ga0306920_100948475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1255	Open in IMG/M
3300032261\|Ga0306920_102291427	Not Available	748	Open in IMG/M
3300032261\|Ga0306920_102882739	Not Available	652	Open in IMG/M
3300033289\|Ga0310914_10392846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1255	Open in IMG/M
3300033289\|Ga0310914_10797832	Not Available	842	Open in IMG/M
3300033289\|Ga0310914_10800919	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300033289\|Ga0310914_11508629	Not Available	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.31%
Host-Associated	Host-Associated	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.92%
Aquatic	Environmental → Aquatic	1.39%
Plants	Host-Associated → Plants	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.92%
Sediment	Environmental → Aquatic → Sediment	1.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.42%
Loam	Environmental → Terrestrial → Soil → Loam	9.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A10DRAFT_10150302	3300000816	Forest Soil	ERPVPPLPIDARQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR*
Ga0066388_1007628493	3300005332	Tropical Forest Soil	MADTAARDSAKCQSSGAALGSLAFKECRALLEDKMSIENDFPPDRSYARGRN*
Ga0066388_1031702612	3300005332	Tropical Forest Soil	MADRAARDSAKCQSSGAALGTQAYKQCRALLKDKMSIENDVPPDRSYAHTRGRN*
Ga0066388_1042938553	3300005332	Tropical Forest Soil	RQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKKCRALLEDKMSIEDVPHDRGYASTRSRN*
Ga0066388_1049461232	3300005332	Tropical Forest Soil	ALSKMTDTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDALGADRPLK*
Ga0070713_1017870001	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MANRAAADSAKCQSAAGPLGSQAYKECRALLEAKISIEKDVPPDRAYVHILQ*
Ga0066903_1007393882	3300005764	Tropical Forest Soil	VRALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKTSIENAVPPDRSYASTRGR*
Ga0066903_1012572381	3300005764	Tropical Forest Soil	MADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYA
Ga0066903_1015950832	3300005764	Tropical Forest Soil	RQETARDHAHALSEMADTAARDSAKCRSSGAALGSQDYKKCRALLEDKMSVEKDVPPDRGFGRVN*
Ga0066903_1042596823	3300005764	Tropical Forest Soil	DTAARDSEKCQSSAAALGSQAYKECRALLEEKMSIEKDVPPDRGYARVR*
Ga0066903_1052346671	3300005764	Tropical Forest Soil	YERPVPPLPIAPKQETERDHARDLSEMADRAANVSAGCQSSGAKLGSRAYKQCRALLEDKMSIENDVPPDRSSARGRN*
Ga0066903_1055064572	3300005764	Tropical Forest Soil	LSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIENDFPPDRRHARGRN*
Ga0066903_1088052081	3300005764	Tropical Forest Soil	RDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR*
Ga0075015_1000764513	3300006102	Watersheds	DSAKCQSSGAALGSQAYKKCRALLEGKTSIENEVPPDRSYASTRGR*
Ga0075018_103799853	3300006172	Watersheds	LGSCAWQATPSDHAHVLSEMADTAASDSAKCQSSGAVLGSRAHKECRALLEDKMSIEKDVPPDRGYARVN*
Ga0079221_102337812	3300006804	Agricultural Soil	MPRGHAQALSEMANRAAADSKKCQSAAGPLGSQAYKECRALLEAKINIEKDVPPDRAYVHILQ*
Ga0126372_128039901	3300010360	Tropical Forest Soil	MARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRG
Ga0126378_112113562	3300010361	Tropical Forest Soil	ADTAARDSAKCQSSGAALGSQAYKECRALLGDKMSIENDFPPDRSYARGRN*
Ga0126378_132023201	3300010361	Tropical Forest Soil	ARALSEMADTAARDSARCQSSGAALGSQAYKKCRALLEDKMSIEDVPRDRGYASTRGRN*
Ga0126377_120229411	3300010362	Tropical Forest Soil	LSEMADTAALDSARCQSSGAALGSQAYKECRALLESKMSIENDVPPDRGYTGRWRN*
Ga0126381_1032022161	3300010376	Tropical Forest Soil	HARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLGDKMSIENDFPPDRSYARGRN*
Ga0126381_1041492601	3300010376	Tropical Forest Soil	ATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMRIEYDLPPDRSYARGRN*
Ga0126383_107040861	3300010398	Tropical Forest Soil	PIDARQARARDHARALSEMADTAARDSEKCQSSGAALGSQAYKKCRTLLDKMSFENDFPPDRRRN*
Ga0132256_1031064491	3300015372	Arabidopsis Rhizosphere	HARELSEMADRAADVSARCQSSGAALGSQAYKKCRALLEDKMSIENGIPPDRSYVSTRGR
Ga0182036_103832981	3300016270	Soil	LSEMADTAARDSAKCQSSGAAFGSQAYKECRALLEDTMSIENDVPLDRSYARSRGRN
Ga0182036_106520111	3300016270	Soil	TASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0182036_107605452	3300016270	Soil	LPIAPRQAMARDHARALSEMADAAARDSAKCQSSSAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0182041_101032485	3300016294	Soil	AARDSAKCQSSGAAFGSQAYKKCRALLEDKMSIENDAPPDRSYASTRGR
Ga0182041_101671151	3300016294	Soil	RQATARDHARALSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPGRSYARGRN
Ga0182041_101779941	3300016294	Soil	TAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRGR
Ga0182033_116109472	3300016319	Soil	LSEMADTAARDSAKCQSSGAAFGSQAYKKCRALLEDKMSIENDAPPDRSYASTRGR
Ga0182033_121984512	3300016319	Soil	RDHARALSEMADTAARDSERCQSSGAVLGSHAYKECRALLGDKMSIEKDVLRDESYARTRGRN
Ga0182035_105611081	3300016341	Soil	RQATARDHARALSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVPRDESYARTRGRN
Ga0182035_110991061	3300016341	Soil	RDHARALSEMADTAALDSARCQSSGAALGSQAYKECRALLGDRMNIEKVPPDRGYARTRA
Ga0182035_118742562	3300016341	Soil	MADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPDRSYARG
Ga0182032_101483571	3300016357	Soil	TDDGGQMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0182032_118429741	3300016357	Soil	GPKQATASDHARALSEMADTAARDSAKCQSSGAAFSSQAYKECRALLEDTMSIENDVPLDRSYARSRGRN
Ga0182034_105007991	3300016371	Soil	PVPPLPIGPRQTTAPDHARALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0182034_111003062	3300016371	Soil	SEMADTAALDSARCQSSGAALGSQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0182034_117167631	3300016371	Soil	RALSEMADTAARDSAKCQSSGAAFGSQAYKECRALLEDTMSIENDVPLDRSYARSRGRN
Ga0182034_120610812	3300016371	Soil	QATARDHARALSEMADTAARDSAKCQSSGTALGSPAYKKCRALLEDKMSIQNDFPPDRSYARGRN
Ga0182040_110013832	3300016387	Soil	RALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0182037_113097501	3300016404	Soil	IDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKNVPNDRGYTGRLRN
Ga0182037_115334061	3300016404	Soil	PVPPLPIAARQATARDHARALSEMADTAARDSAKCQSSGATLGSLAYKKCRALLEDKMSIENDFPPDRSYARGRN
Ga0182037_116562842	3300016404	Soil	ALSEMADRAARDNARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGRWRN
Ga0182039_101680414	3300016422	Soil	LPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0182039_105125861	3300016422	Soil	VPPLPIDARQTTARDHARALSEMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0182039_108677482	3300016422	Soil	DARQTTARDHARALSEMADTAALDSARCQSSGAALESQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0182039_108824301	3300016422	Soil	QATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0182039_110296492	3300016422	Soil	PVPPLPIDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKNVPNDRGYTRRLRN
Ga0182039_113281421	3300016422	Soil	AARQATARDHARALSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVLRDESYARTRGRN
Ga0182039_118111421	3300016422	Soil	MADTAASDSAKCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0182038_110157761	3300016445	Soil	PLPIAARQATARDHARVLSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVPRDESYARTRGRN
Ga0182038_118372251	3300016445	Soil	RPVPPLPIGPRQSDHARALSEMADTAARATAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTRGR
Ga0187779_100327191	3300017959	Tropical Peatland	MADAAARDSEKCQSSGAALGSQAYKKCRTLLDKMSFENDFPPDRTYARRQN
Ga0187779_112785331	3300017959	Tropical Peatland	MADAAARDSEKCQSSGATLGSQAYKKCRTLLDKMSFENDFPPDRRRN
Ga0187765_102368451	3300018060	Tropical Peatland	AHTAARDSTKCQSSGAAPGSQAYKECRALLEDTMSIENDVPLDRSYARTRGRN
Ga0187765_105993781	3300018060	Tropical Peatland	GPRQATASDHARVLSEMADTAARDSAKCQSSGAALGTPAYKKCRALLEDKMSIDDVWPGRTYGSTRGR
Ga0210399_105014991	3300020581	Soil	SKMADTAARNSAKCQSSGAALGSQAYKKCRALLEDKMSIENDVLPDRSYASTRGR
Ga0126371_138776671	3300021560	Tropical Forest Soil	MADRAARDSAKCQSSGAAFGSQAYKKCRALLEDKMSIENDVPPDRSYASTRGR
Ga0207692_107805023	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	DSAKCQSSGAALGSQAYKKCRALLEDKMNIENDVPPDRSYGSTRGR
Ga0207826_11318551	3300027680	Tropical Forest Soil	MADTAARDSAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTRGR
Ga0318541_102948123	3300031545	Soil	SIDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0318528_103233381	3300031561	Soil	VPPLPIDARQTTARDHARALSEMADTAALDSARCQSSGAALESQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0318528_104933361	3300031561	Soil	AQDERPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR
Ga0310915_107711983	3300031573	Soil	RALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIEKDVPPDRGYSRANR
Ga0310915_109539211	3300031573	Soil	VPPLPIDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMTIEKTCQTTEVIQVACATE
Ga0310915_110455552	3300031573	Soil	AQDERPIPPLPIGSRQATTTDHARALSEMTDKAARDSAKCQSSGAALGSQAYKKCRALLEDKMNIGNDVPPDRSYASTRNR
Ga0318542_100426221	3300031668	Soil	IDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0318561_104261502	3300031679	Soil	MRWRATKGRSHPLSIAPRQADHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASTR
Ga0318560_104123311	3300031682	Soil	QTTARDRARALSEMADTAALDSAKCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0306917_114109361	3300031719	Soil	MRWRATKGRSHPLSIAPRQADHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASTRGR
Ga0306917_114634791	3300031719	Soil	ARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGDRPLK
Ga0318500_101368021	3300031724	Soil	VRQATARDHARALSEMADTAARDSAKCQSSGTALGSPAYKKCRALLEDKMSIQNDFPPDRSYARGRN
Ga0318501_102373532	3300031736	Soil	ALDSARCQSSGAALESQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0306918_103322543	3300031744	Soil	VPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0306918_108035792	3300031744	Soil	AARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPGRSHARGRN
Ga0306918_109313361	3300031744	Soil	MTDTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDG
Ga0307475_103084754	3300031754	Hardwood Forest Soil	AARNSAKCQSSGAALGSQAYKKCRALLEDKMSIENDVPPDRSYASTRGR
Ga0318537_100677055	3300031763	Soil	AARQATARDHARALSEMADTAARDSAKCQSSGATLGSLAYKKCRALLEDKMSIENDFPPDRSYARGRN
Ga0318535_103404021	3300031764	Soil	ANDERPVPPLSIDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0318509_100869793	3300031768	Soil	MRWRATKGRSHPLSIAPRQADHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRGR
Ga0318509_106852072	3300031768	Soil	IGPRQTTAPDHARALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0318546_112162181	3300031771	Soil	IAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR
Ga0318576_103615141	3300031796	Soil	PPLPIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318550_100047741	3300031797	Soil	NDERPVPPLPIDARQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0307473_101025901	3300031820	Hardwood Forest Soil	TAPDHARALSEMADIAARNSAKCQSSGAALGSQAYKKCRALLENKMRIENDVPPDRSYASTRGR
Ga0310917_101830041	3300031833	Soil	AARDSAKCQSSGAALGSQDYKKCRALLEDKLSIENDIPPDRSFASTRGR
Ga0306919_101459751	3300031879	Soil	SARQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIGNDVPPDRSYASTRNR
Ga0306919_110740931	3300031879	Soil	NHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRG
Ga0306925_114448362	3300031890	Soil	LAEMADRAARDTARCRSSGAALGSQAYKECRALLEDKMSIEKDVPPDRDYARVK
Ga0318536_103076972	3300031893	Soil	HARALSEMADTAALDSARCQSSGAALGSQAYKECRALLGDRMNIEKDVPPDTGYARTREN
Ga0318522_104193191	3300031894	Soil	DHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRG
Ga0318520_106352621	3300031897	Soil	PRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306923_117716163	3300031910	Soil	MADTAARDSAKCQSSGALLGSQAYKKCRALLEDRMSIENDIPPGRSYARGRN
Ga0306923_124287162	3300031910	Soil	PIDAGQATARDHARALSEMADTAARNSARCQSSGAALGSQAYKKCRALLEDKMSIEKNVPPDRGYSGANR
Ga0306921_102609301	3300031912	Soil	APRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0306921_109572002	3300031912	Soil	PVPPLPIDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKNVPNDRGYTGRLRN
Ga0306921_122060052	3300031912	Soil	PIAARQATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLENKMSIENDFPPDRSYYARGRN
Ga0310912_102905463	3300031941	Soil	RPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310912_104272711	3300031941	Soil	ARDSAKCQSSGAALGSRAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0310916_109180942	3300031942	Soil	HARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKIRIENDVPPDRGYASTRGR
Ga0310913_111957252	3300031945	Soil	LSEMAYTAASDSAKCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGRWRN
Ga0310910_111635262	3300031946	Soil	NHARALSEMADTTARDSAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTGG
Ga0310909_102641372	3300031947	Soil	MADTAARDSAKCQSSGAALGSQAYKKCRALLEDKIRIENDVPPDRGYASTRGR
Ga0310909_102759201	3300031947	Soil	PRQEMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310909_105245252	3300031947	Soil	PIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0310909_115353882	3300031947	Soil	NSARCQSSGAALGSQAYKKCRALLEDKMSIEKDVPPDRGYSRANRVN
Ga0306926_104904041	3300031954	Soil	MARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENNVPPDRGYASTRGR
Ga0306926_106462191	3300031954	Soil	AMARDHARALSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMRIENDVPPDRGAASIRGR
Ga0306926_106648803	3300031954	Soil	QTTAPDHARALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0306926_113490871	3300031954	Soil	MPIARQADHARALSEMADTAARDSAKCQSSGAALGSRAYKECRALLEDKMSIENDVPPDRSYASPRGR
Ga0306926_115936601	3300031954	Soil	PLPIDAGQATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIEKDVPPDRGYSRANR
Ga0306926_124293581	3300031954	Soil	MTDKAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIGNDVPPDRSY
Ga0306926_129250321	3300031954	Soil	LPIGPRQSNHARALSEMADTTARDSAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTGGR
Ga0318531_100852621	3300031981	Soil	APRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318531_100915051	3300031981	Soil	KPVPPLPIDARQTTARDHARALSEMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0318531_105806151	3300031981	Soil	RQATARDHARALSEMADTAARDSAKCQSSGATLGSLAYKKCRALLEDKMSIENDFPPDRSYARGRN
Ga0306922_109863571	3300032001	Soil	TAARDSARCQSSGAALGSQAYKRCRALLEDKMSVEKDGPTDRGYTGRWSN
Ga0318569_104930771	3300032010	Soil	VPPLPIDARQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0310911_102575073	3300032035	Soil	IAPRQEMARDHARALSEMTDTAARDSAKCQSSGAAVGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310911_103526111	3300032035	Soil	ATARDHARALSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVPRDESYARTRGRN
Ga0310911_105291871	3300032035	Soil	MADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIEKDVPPDRGYSRANR
Ga0318556_105964972	3300032043	Soil	QATARDHARALSEMADTAARDSEKCQSSGAALGSQAYKKCRALLGEKMSIEKDVPPDRGYSRANR
Ga0318558_102787251	3300032044	Soil	PIAPRQAVARDHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPNRSYTRTRARN
Ga0318506_104805331	3300032052	Soil	IAARDSAKCQLSGAALGSQAYKKCRALLEDKMMSIENNVPPDRSYASTRGR
Ga0318533_101678451	3300032059	Soil	MADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318505_102080151	3300032060	Soil	RALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318504_105156702	3300032063	Soil	KTDDGGQMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0318553_100098201	3300032068	Soil	NDERPVPPLSIDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0306924_102529161	3300032076	Soil	ATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306924_106495162	3300032076	Soil	LPIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306924_114789921	3300032076	Soil	PLPIAPRQAMARDHARALSEMADAAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR
Ga0306924_122057181	3300032076	Soil	PLPIAPRQATARDHARALSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMRIENDVLPDRGYASTRGR
Ga0306924_124594531	3300032076	Soil	ALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKIRIENDVPPDRGYASTRGR
Ga0318518_104243801	3300032090	Soil	PPLPIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSRAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306920_1002324411	3300032261	Soil	IAARQATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLENRMSIENEVRPDRSYASTRGR
Ga0306920_1009484753	3300032261	Soil	AQDERPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0306920_1022914271	3300032261	Soil	MTDKAARDSAKCQSSGVALGSQAYKKCRALLEDKMSIGNDVPPDRSYASTRN
Ga0306920_1028827391	3300032261	Soil	PIGPRQETARDHARALSEMTDTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDGSYARTRGRN
Ga0310914_103928461	3300033289	Soil	ERPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310914_107978321	3300033289	Soil	MRWRRTKVPPLPIDARQATARDHARALSEMADTAARDSEKCQSSGAALGSQAYKKCRALLGEKMSIEKDVPA
Ga0310914_108009191	3300033289	Soil	TAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPGRSYARGRN
Ga0310914_115086291	3300033289	Soil	MADTAARDSEKCQSSGAALGSQAYKKCRALLGEKMSIEKDVPPDRGYTRVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051426

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences