Metagenome / Metatranscriptome Family F051379

Basic Information
Family ID	F051379
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	42 residues
Representative Sequence	GSAEDKQPIPAIGWFARCRDTEGNAFSLFQSDESVPAPGEG
Number of Associated Samples	126
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.69 %
% of genes near scaffold ends (potentially truncated)	97.22 %
% of genes from short scaffolds (< 2000 bps)	95.83 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Bacteria (92.361 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.583 % of family members)
Environment Ontology (ENVO)	Unclassified (27.083 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.472 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.54% Coil/Unstructured: 72.46%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF04657	DMT_YdcZ	33.33
PF01266	DAO	20.83
PF02481	DNA_processg_A	9.03
PF02738	MoCoBD_1	4.17
PF03721	UDPG_MGDP_dh_N	2.78
PF00892	EamA	2.08
PF00903	Glyoxalase	1.39
PF13335	Mg_chelatase_C	0.69
PF03793	PASTA	0.69
PF04185	Phosphoesterase	0.69
PF00370	FGGY_N	0.69
PF07883	Cupin_2	0.69
PF01061	ABC2_membrane	0.69
PF00378	ECH_1	0.69
PF01842	ACT	0.69
PF07045	DUF1330	0.69
PF02588	YitT_membrane	0.69
PF12399	BCA_ABC_TP_C	0.69
PF01979	Amidohydro_1	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	33.33
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	18.06
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.78
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	2.78
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	2.78
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	2.78
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	2.78
COG1284	Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains	Function unknown [S]	0.69
COG2364	Uncharacterized membrane protein YczE	Function unknown [S]	0.69
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.69
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.36 %
Unclassified	root	N/A	7.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.36 %
Unclassified	root	N/A	7.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.36 %
Unclassified	root	N/A	7.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.92 %
Unclassified	root	N/A	7.64 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.22 %
Unclassified	root	N/A	7.64 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.61 %
Unclassified	root	N/A	7.64 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.36 %
Unclassified	root	N/A	7.64 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.36 %
Unclassified	root	N/A	7.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.36 %
Unclassified	root	N/A	7.64 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.69 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.36 %
Unclassified	root	N/A	7.64 %
Amycolatopsis vancoresmycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis vancoresmycina	0.69 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0572744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1930746	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13728729	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300000891\|JGI10214J12806_11387104	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300000956\|JGI10216J12902_101721654	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300000956\|JGI10216J12902_101833393	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300000956\|JGI10216J12902_101839473	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300000956\|JGI10216J12902_108845083	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300001538\|A10PFW1_10386118	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300002568\|C688J35102_118363590	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300002568\|C688J35102_118414000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300002568\|C688J35102_118499619	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300002568\|C688J35102_118519812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300003324\|soilH2_10302105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1494	Open in IMG/M
3300005093\|Ga0062594_100417793	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005093\|Ga0062594_100837180	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005172\|Ga0066683_10066181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2155	Open in IMG/M
3300005172\|Ga0066683_10613854	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005180\|Ga0066685_10527974	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005183\|Ga0068993_10380229	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005184\|Ga0066671_10850473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300005186\|Ga0066676_11094319	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005187\|Ga0066675_11375052	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005329\|Ga0070683_102197220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300005337\|Ga0070682_101075091	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005338\|Ga0068868_101694154	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005353\|Ga0070669_100346620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1205	Open in IMG/M
3300005364\|Ga0070673_100191228	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300005434\|Ga0070709_11264573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300005437\|Ga0070710_10872891	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005439\|Ga0070711_101273384	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005440\|Ga0070705_100687945	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005445\|Ga0070708_102187802	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005445\|Ga0070708_102241288	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005455\|Ga0070663_100567826	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300005458\|Ga0070681_12027516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis vancoresmycina	504	Open in IMG/M
3300005466\|Ga0070685_11590044	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005526\|Ga0073909_10601404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300005529\|Ga0070741_10150693	All Organisms → cellular organisms → Bacteria	2338	Open in IMG/M
3300005529\|Ga0070741_11118181	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005542\|Ga0070732_10562739	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005557\|Ga0066704_10628742	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005564\|Ga0070664_100313453	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300005575\|Ga0066702_10947023	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005614\|Ga0068856_100205227	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300005719\|Ga0068861_101953033	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005764\|Ga0066903_108764564	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005841\|Ga0068863_101944030	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005874\|Ga0075288_1058495	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005985\|Ga0081539_10123928	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300006032\|Ga0066696_10025755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3085	Open in IMG/M
3300006173\|Ga0070716_101466463	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006175\|Ga0070712_100496197	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300006175\|Ga0070712_101573199	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006578\|Ga0074059_10019175	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006796\|Ga0066665_10258222	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300006796\|Ga0066665_11116075	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006797\|Ga0066659_11410626	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300006852\|Ga0075433_10553225	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300006914\|Ga0075436_100554542	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300007076\|Ga0075435_100614484	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300007076\|Ga0075435_101734713	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009101\|Ga0105247_10414954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300009137\|Ga0066709_101814303	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300009147\|Ga0114129_11162503	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300009176\|Ga0105242_12227191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300009177\|Ga0105248_13234832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300009553\|Ga0105249_13376140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300009840\|Ga0126313_10736030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300009840\|Ga0126313_11473743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300010036\|Ga0126305_11091705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300010037\|Ga0126304_10182667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1367	Open in IMG/M
3300010038\|Ga0126315_10456734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300010039\|Ga0126309_10021325	All Organisms → cellular organisms → Bacteria	2834	Open in IMG/M
3300010044\|Ga0126310_11294490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300010045\|Ga0126311_10225038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1380	Open in IMG/M
3300010325\|Ga0134064_10336253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300010366\|Ga0126379_11382892	All Organisms → cellular organisms → Bacteria → Terrabacteria group	810	Open in IMG/M
3300010366\|Ga0126379_12030976	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300010373\|Ga0134128_10593177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300010373\|Ga0134128_11688919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300010397\|Ga0134124_10302973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1490	Open in IMG/M
3300010398\|Ga0126383_12437093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300010398\|Ga0126383_13342326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300010400\|Ga0134122_10609488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300010403\|Ga0134123_11171881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300011106\|Ga0151489_1674194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300012212\|Ga0150985_107241857	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300012351\|Ga0137386_10945304	Not Available	615	Open in IMG/M
3300012356\|Ga0137371_10067696	All Organisms → cellular organisms → Bacteria	2766	Open in IMG/M
3300012502\|Ga0157347_1033148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300012530\|Ga0136635_10055957	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300012902\|Ga0157291_10253439	Not Available	587	Open in IMG/M
3300012912\|Ga0157306_10466528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300012923\|Ga0137359_11617652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300012927\|Ga0137416_11423259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300012943\|Ga0164241_10564888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300012958\|Ga0164299_10476508	Not Available	824	Open in IMG/M
3300012971\|Ga0126369_13249258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300012988\|Ga0164306_10375771	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300013102\|Ga0157371_11183418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300013102\|Ga0157371_11319472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300014058\|Ga0120149_1052947	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300014487\|Ga0182000_10350085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	636	Open in IMG/M
3300014969\|Ga0157376_12860955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300015374\|Ga0132255_102918675	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300017659\|Ga0134083_10398140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300018071\|Ga0184618_10279004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300018076\|Ga0184609_10350757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300018083\|Ga0184628_10434543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300018482\|Ga0066669_12303226	Not Available	514	Open in IMG/M
3300018920\|Ga0190273_10865203	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300019875\|Ga0193701_1079771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300020015\|Ga0193734_1045230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300020215\|Ga0196963_10232898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300021560\|Ga0126371_12635639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300022756\|Ga0222622_10228426	Not Available	1250	Open in IMG/M
3300023071\|Ga0247752_1073957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300025146\|Ga0209322_10383955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300025898\|Ga0207692_10201049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1171	Open in IMG/M
3300025899\|Ga0207642_10283006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	954	Open in IMG/M
3300025910\|Ga0207684_10301242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1382	Open in IMG/M
3300025911\|Ga0207654_10973013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300025919\|Ga0207657_11471761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300025939\|Ga0207665_10334430	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300025944\|Ga0207661_11663872	Not Available	583	Open in IMG/M
3300026067\|Ga0207678_10618440	Not Available	950	Open in IMG/M
3300026078\|Ga0207702_10960692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300027748\|Ga0209689_1266593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300027765\|Ga0209073_10500164	Not Available	512	Open in IMG/M
3300027821\|Ga0209811_10438112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300028710\|Ga0307322_10236724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300028722\|Ga0307319_10058988	Not Available	1209	Open in IMG/M
3300028793\|Ga0307299_10067346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1326	Open in IMG/M
3300028807\|Ga0307305_10305052	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300028811\|Ga0307292_10347542	Not Available	626	Open in IMG/M
3300028819\|Ga0307296_10478749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300028884\|Ga0307308_10480555	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300030993\|Ga0308190_1134558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300031234\|Ga0302325_10978686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300031731\|Ga0307405_11756857	Not Available	551	Open in IMG/M
3300031996\|Ga0308176_11943022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300033551\|Ga0247830_11414749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300034377\|Ga0334931_163658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.17%
Host-Associated	Host-Associated	20.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Plants	Host-Associated → Plants	20.83%
Aquatic	Environmental → Aquatic	4.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Sediment	Environmental → Aquatic → Sediment	2.78%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Marine	Environmental → Aquatic → Marine	0.69%
Peat	Environmental → Terrestrial → Peat	0.69%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.64%
Loam	Environmental → Terrestrial → Soil → Loam	15.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.39%
Ice	Environmental → Aquatic → Freshwater → Ice	0.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.69%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.47%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.39%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.69%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_05727442	2228664022	Soil	VREFGGKADDKTPIPHVGWFSHCVDTEGINFSLFESDESVTG
ICChiseqgaiiDRAFT_19307461	3300000033	Soil	PIPQTGWFAKCKDTEGNAFSLFQADESVPGDFSES*
ICChiseqgaiiFebDRAFT_137287291	3300000363	Soil	QPIPQTGWFAKCKDTEGNAFSLFQADESVPGDFSES*
JGI10214J12806_113871043	3300000891	Soil	QPIPSIGWFARCRDTEGNEFSLFQADESVPAPGEG*
JGI10216J12902_1017216541	3300000956	Soil	ARARELGGSAEDKQPIPGGGWFARCGDTEGNNFWLFQSDESVPAPTEG*
JGI10216J12902_1018333933	3300000956	Soil	DKQPIPHVGWFARCKDNEGTEFSLFQSDESVQPPS*
JGI10216J12902_1018394731	3300000956	Soil	DDKQPIPHVGWFARCKDPAGNAFSFFQSDESVQMPEGAETPGQ*
JGI10216J12902_1088450831	3300000956	Soil	DDKQPIPSIGWFARCKDSEGNEFSLYQSDENAPMPEQ*
A10PFW1_103861183	3300001538	Permafrost	KEPIPHVGWFARCKDTEGNPFSLFQSDESVAPPQ*
C688J35102_1183635902	3300002568	Soil	GGQADEKQPIPGVGWFAGVTDPEGNHWSFFQSDESVAPPGADARER*
C688J35102_1184140001	3300002568	Soil	LGGQAEDKQPIPHVGWFARCQDTEGNTFSLFQSDESVSAE*
C688J35102_1184996191	3300002568	Soil	GGSADDKQPIPTIGWFARCVDTEGNRFSLFQPDDSVPAPGEA*
C688J35102_1185198121	3300002568	Soil	ELGGNAEQKQPIPHVGWFARCQDTEGNPFSLFQTDESVAPPSQ*
soilH2_103021053	3300003324	Sugarcane Root And Bulk Soil	ENGGRADDKQPIPHVGWFARCTDTEGNGFSLFQSDESVTG*
Ga0062594_1004177934	3300005093	Soil	GGEADDKQPIPGIGWFSRCKDSEGNDFSLYQSDENAPGGE*
Ga0062594_1008371801	3300005093	Soil	LGGRAEDKMPIPHVGWFTPCSDPEGNAFSLFQSDESVTG*
Ga0066683_100661811	3300005172	Soil	GGKAEDRQPIPHVGWFARCEDTEGNKFSLFQSDESVPPPSA*
Ga0066683_106138541	3300005172	Soil	GSAEDKQPIPTVGWFARCTDTEGNDFSLFQMDESVTVPG*
Ga0066685_105279741	3300005180	Soil	ELGGDDGEKQPIPNIGWFARCKDSEGNEFSLFQSDESAPMPEGMPGQ*
Ga0068993_103802291	3300005183	Natural And Restored Wetlands	EEKQPIPQTGWFARCKDTEGNSFSLFQSDESVPGSSLAFF*
Ga0066671_108504732	3300005184	Soil	GQAEDKQPIPGVGWFAGCKDPEGNAFSLFQSDESIPAPSA*
Ga0066676_110943192	3300005186	Soil	LGRVREFGGSAQEKQPIPTIGWFARCQDTEGNGFSLFQSDESVPMPG*
Ga0066675_113750521	3300005187	Soil	ELGGQADDKQPIPGVGWFTAAKDPDGNEFSLFQADESAAPPAG*
Ga0070683_1021972202	3300005329	Corn Rhizosphere	DDKQPIPGVGWFARCTDSEGNSFSLFQGDESVTMPEGAPGA*
Ga0070682_1010750911	3300005337	Corn Rhizosphere	GSADDKQPIPSIGWFARCVDTEGNRFSLFQADESVPAPGEG*
Ga0068868_1016941541	3300005338	Miscanthus Rhizosphere	GGSADDKQPIPSIGWFARCVDTEGNRFSLFQADESVPAPGEG*
Ga0070669_1003466201	3300005353	Switchgrass Rhizosphere	LGGKADDKQPIPGVGWFARCTDSEGNSFSLFQGDESVTMPEGAPGA*
Ga0070673_1001912283	3300005364	Switchgrass Rhizosphere	SIARARELGGSAEDKQPIPTIGWFARCVDTEGNPFSLFQPDDSVPAPGES*
Ga0070709_112645732	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ADEEQPIPAIGWFARCVDTEGNPFSLFQADESAPARDES*
Ga0070710_108728912	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	IGASISKVRELGGSADEEQPIPAIGWFARCVDTEGNPFSLFQADESAPARDES*
Ga0070711_1012733842	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SISKVRELGGSADEEQPIPAIGWFARCVDTEGNPFSLFQADESAPARDES*
Ga0070705_1006879451	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RELGGSAEDKQPIPTIGWFARCVDTEGNPFSLFQPDDSVPAPGES*
Ga0070708_1021878021	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GGKAEDKQPIPTVGWFARGEDSEGNSFSLFQSDESVPMPS*
Ga0070708_1022412882	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RELGGSADDKQPIPSVGWFARCADTEGNDFSLFQSDESVPSPG*
Ga0070663_1005678261	3300005455	Corn Rhizosphere	ELGGSAEDKQPIPTIGWFARCVDTEGNPFSLFQPDDSVPAPGES*
Ga0070681_120275161	3300005458	Corn Rhizosphere	KQPIPGVGWFARCTDSEGNSFSLFQGDESVTMPEGAPGA*
Ga0070685_115900441	3300005466	Switchgrass Rhizosphere	SIAKARELGGSADDKQPIPSIGWFARCVDPEGNRFSLFQPDESVPAPGEG*
Ga0073909_106014041	3300005526	Surface Soil	EKQPIPQTGWFARCKDTEGNAFSLFQGDDSVPGDFS*
Ga0070741_101506931	3300005529	Surface Soil	AGEKQPIPTIGWFARCKDTEGNAFSLFQADDSVPGDAGQG*
Ga0070741_111181811	3300005529	Surface Soil	KQPIPTIGWFARCRDTEGNAFSLFQGDENAPGSFG*
Ga0070732_105627391	3300005542	Surface Soil	GTSDDKQPIPHVGWFAHAKDTEGNAFSLFQSDESVAG*
Ga0066704_106287422	3300005557	Soil	KQPIPHVGWFARCKDTEGNRFSLFQSDESVAPPQ*
Ga0070664_1003134533	3300005564	Corn Rhizosphere	RDAGGSADEKQPIPQTGWFARCKDTEGNAFSLFQGDQSVPGDLG*
Ga0066702_109470232	3300005575	Soil	EDREPIPHVGWFARCEDTEGNKFSLFQSDESVPPPSA*
Ga0068856_1002052271	3300005614	Corn Rhizosphere	RARELGGSAEDKQPIPTIGWFARCVDTEGNPFSLFQPDDSVPAPGES*
Ga0068861_1019530332	3300005719	Switchgrass Rhizosphere	RARELGGSAEDKQPIPAIGWFARCRDTEGNAFSLFQSDESVPAPGEG*
Ga0066903_1087645642	3300005764	Tropical Forest Soil	AEDKMPIPHVGWFTHCVDTEGIKFSLFQSDESVTG*
Ga0068863_1019440302	3300005841	Switchgrass Rhizosphere	DDKQPIPQTGWLARCKDTEGNTFSLYQSDESVPGDLSEG*
Ga0075288_10584952	3300005874	Rice Paddy Soil	DDKQPIPTIGWFARCVDTEGNRFSLFQPDDSVPAPGES*
Ga0081539_101239284	3300005985	Tabebuia Heterophylla Rhizosphere	GEAEDKQPIPSIGWFARCKDSEGNEFSLYQSDENAPGGS*
Ga0066696_100257551	3300006032	Soil	PKIGWFARCKDSEGNEFSLFQSDENAPMPEGMPG*
Ga0070716_1014664632	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	QAEDKQPIPGIGWFAGCKDPDGNSFSFFQSDESVAPPSG*
Ga0070712_1004961971	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRELGGEAEDKQPIPGVGWFSGCKDSEGNEFSLFQGDESAPPPAS*
Ga0070712_1015731991	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AKVRELGGEADDKQPIPHTGWFARCKDGEGNPFSLFQSDESVAPPQ*
Ga0074059_100191752	3300006578	Soil	PIPGIGWFARCTDSEGNSFSLFQGDESVTMPEGAPPA*
Ga0066665_102582221	3300006796	Soil	GEKQPIPNIGWFARCKDSEGNEFSLFQSDESAPMPEGMPGQ*
Ga0066665_111160752	3300006796	Soil	GKAEDKMPIPHVGWFTPCSDTDGNAFSLFQSDESVTG*
Ga0066659_114106261	3300006797	Soil	AEEKQPIPHVGWFARCRDTEGNRFSLFQSDESVAPPQ*
Ga0075433_105532253	3300006852	Populus Rhizosphere	RAESKQPIPQIGWFARAWDTEGNPFSLFQSDESVAPG*
Ga0075436_1005545421	3300006914	Populus Rhizosphere	ARVNELGGRAESKQPIPQIGWFARAWDTEGNPFSLFQSDESVAPG*
Ga0075435_1006144841	3300007076	Populus Rhizosphere	EAEDKQPIPSVGWFARCKDSEGNPFSIFQSDESVQMPS*
Ga0075435_1017347131	3300007076	Populus Rhizosphere	DIGKVRELGGEAEDKQPIPGVGWFSGCKDSEGNEFSLFQGDESAPPPAS*
Ga0105247_104149542	3300009101	Switchgrass Rhizosphere	IPGIGWFARCTDSEGNSFSLFQGDESVTMPEGAPGA*
Ga0066709_1018143033	3300009137	Grasslands Soil	AEDKMPIPHVGWFTPCSDTDGNAFSLFQSDESVTG*
Ga0114129_111625033	3300009147	Populus Rhizosphere	SADDKQPIPNVGWFTHCKDTEGNAFSLFQSNESAGG*
Ga0105242_122271911	3300009176	Miscanthus Rhizosphere	DEKQPIPQTGWFARCKDTEGNAFSLFQGDQSVPGDLG*
Ga0105248_132348321	3300009177	Switchgrass Rhizosphere	ELGGEAEDKQPIPGVGWFSGCKDSEGNEFSLFQGDESAPPPAS*
Ga0105249_133761401	3300009553	Switchgrass Rhizosphere	GSADDKQPIPQTGWLARCKDTEGNTFSLYQSDESVPGDLSEG*
Ga0126313_107360303	3300009840	Serpentine Soil	DDKQPIPHVGWFARCKDTEGNAFSLFQSDESVQLPT*
Ga0126313_114737431	3300009840	Serpentine Soil	KQPIPGVGWFARAWDTEGNSFSLFQSDESVAPPGS*
Ga0126305_110917051	3300010036	Serpentine Soil	GSAEDKQPIPGIGWFARCEDTEGNPFSIFQADDSVAIPAETQNREISN*
Ga0126304_101826671	3300010037	Serpentine Soil	LGGQADDKMPIPEIGWFTHCTDTEGIAFSLFQSDESVSPPEG*
Ga0126315_104567341	3300010038	Serpentine Soil	IPGVGWFSNCTDTEGNKFGLFQTDESIAPPAAPGPS*
Ga0126309_100213251	3300010039	Serpentine Soil	GRAEDKQPIPSIGWFARCWDTEGNSFSLYQNDENAG*
Ga0126310_112944902	3300010044	Serpentine Soil	ADDKQPIPSVGWFARCKDTEGNPFSLFQSDESVQPH*
Ga0126311_102250381	3300010045	Serpentine Soil	AEDKQPIPSIGWFARCWDTEGNSFSLYQNDENAA*
Ga0134064_103362532	3300010325	Grasslands Soil	GGHAEDKQPIPGVGWFAGCKDPEGNSFSFFQGDESVPPPTQ*
Ga0126379_113828921	3300010366	Tropical Forest Soil	EKQPIPHIGWFARAKDSEGNPFSLFQTDESAAPPA*
Ga0126379_120309763	3300010366	Tropical Forest Soil	IAKVRELGGKAEDKMPIPHVGWFTHCVDTEGINFSLFQSDESVTG*
Ga0134128_105931771	3300010373	Terrestrial Soil	LGGSADDKQPIPSIGWFARCVDTEGNRFSLFQADESVPAPGEG*
Ga0134128_116889192	3300010373	Terrestrial Soil	SKVRELGGSADEEQPIPAIGWFARCVDTEGNPFSLFQADESAPARDES*
Ga0134124_103029734	3300010397	Terrestrial Soil	ELGGSADEEQPIPAIGWFARCVDTEGNPFSLFQADESAPARDES*
Ga0126383_124370932	3300010398	Tropical Forest Soil	EEHPIPGIGWFARCVDTEGNPFSLFQADESAPSPDESEPAEADRS*
Ga0126383_133423261	3300010398	Tropical Forest Soil	VRELGGSADEKQPIPTIGWYARCRDTEGNAFSLFQGDDSVTG*
Ga0134122_106094883	3300010400	Terrestrial Soil	QPIPGIGWFARCKDSEGNSFSLFQGDESVTMPEGAPGG*
Ga0134123_111718813	3300010403	Terrestrial Soil	ADDKQPIPGIGWFARCKDSEGNSFSLFQGDESVTMPEGAPGA*
Ga0151489_16741941	3300011106	Soil	LGGKADDKQPIPGIGWFARCTDSEGNSFSLFQGDESVTMPEGAPGA*
Ga0150985_1072418571	3300012212	Avena Fatua Rhizosphere	QPIPKIGWFARCKDSEGNDFSLFQSDENAPMPEGMPGS*
Ga0137386_109453041	3300012351	Vadose Zone Soil	ARVRELGGSTEDKQPIPTVGWFARCTDTEGNDFSLFQMDESVTVPG*
Ga0137371_100676961	3300012356	Vadose Zone Soil	EDKQPIPTVGWFARCTDTEGNDFSLFQMDESVTAPG*
Ga0157347_10331481	3300012502	Arabidopsis Rhizosphere	DIGASISKVRELGGSADEEQPIPAIGWFARCVDTEGNPFSLFQADESAPARDES*
Ga0136635_100559571	3300012530	Polar Desert Sand	EDKQPIPGIGWFARCEDTEGNPFSIFQPDDSVPIPAEMQGREISN*
Ga0157291_102534391	3300012902	Soil	HGGRADDKQPIPHVGWFTSCTDTEGNDFSLFQSDESVTG*
Ga0157306_104665283	3300012912	Soil	GEAEDKTPIPHVGWFSHCTDTEGIAFSLFQSDESVQPG*
Ga0137359_116176522	3300012923	Vadose Zone Soil	GDKQPIPHVGWFTHCTDTEGNDFSLYQSDESVAG*
Ga0137416_114232593	3300012927	Vadose Zone Soil	SGDKQPIPHVGWFTHCTDTEGNDFSLYQSDESVAG*
Ga0164241_105648882	3300012943	Soil	EDKMPIPHVGWFTHCSDPEGNDFSLFQSDEAVTG*
Ga0164299_104765082	3300012958	Soil	ADDKQPIPSIGWFARCMDTEGNRFSLFQADESVPAPGEG*
Ga0126369_132492581	3300012971	Tropical Forest Soil	AKVRELGGEAEDKQPIPSVGWFAGCKDSEGNEFALFQGDESAQPA*
Ga0164306_103757713	3300012988	Soil	SGEAEDKQSIPGIGWFSGCKDSEGNGFSLFQSDENAPPPAS*
Ga0157371_111834182	3300013102	Corn Rhizosphere	ADDKQPIPQTGWFARCKDTEGNAFSLFQTDESVPGDFSES*
Ga0157371_113194722	3300013102	Corn Rhizosphere	ELGGSADDKQPIPAIGWFARCRDTEGNAFSLFQSDESVPAPGEG*
Ga0120149_10529471	3300014058	Permafrost	AEGKEPIPHVGWFARCKDTEGNPFSLFQSDESVAPPQ*
Ga0182000_103500852	3300014487	Soil	VVPWSIAKVRELGGKADDKNPIPHVGWFARCSDPDGNSFSLFQGDEGAGA*
Ga0157376_128609551	3300014969	Miscanthus Rhizosphere	GEAGEKQPIPQTGWFARCKDTEGNTFSLFQGDDSVPGDFS*
Ga0132255_1029186751	3300015374	Arabidopsis Rhizosphere	DADLAKVRELGGNADDKQPIPHVGWFARCKDGEGNSFSLFQSDESVAPPQ*
Ga0134083_103981401	3300017659	Grasslands Soil	ELGGTAAQKEPIPHVGWFARCQDTEGNPFSLFQSDESVAPPSQ
Ga0184618_102790041	3300018071	Groundwater Sediment	EPIPTIGWFARCKDSEGNEFSLFQSDESVTMPEGAPQD
Ga0184609_103507571	3300018076	Groundwater Sediment	ASVERVNELGGSAEDKQAIPATGWYARCEDTEGNQFSIFQADDSVPIPAELQSRENSN
Ga0184628_104345431	3300018083	Groundwater Sediment	SIAKVRELGGEAEDKTPIPHVGWFSHCTDTEGIAFSLFQSDESVQPG
Ga0066669_123032262	3300018482	Grasslands Soil	RELGGKAEDKQPIPGVGWVAGCSDTGGNAFSLFQGDESVPAPG
Ga0190273_108652031	3300018920	Soil	ESDDVDASIERVNELGGSAEDKQPIPGTGWYARCEDTEGNPFSIFQADDSVPIPAELQSRENSN
Ga0193701_10797712	3300019875	Soil	LGGSAEDKQPIPGIGWFARCVDTEGNKFSLFQGDESVAAPDET
Ga0193734_10452303	3300020015	Soil	QPIPGIGWFARCKDSEGNSFSLFQSDESVTMPEGAPGT
Ga0196963_102328981	3300020215	Soil	VRELGGEADEKQPIPEFGWFARCRDPEGNAFSLFQSDESVPAA
Ga0126371_126356391	3300021560	Tropical Forest Soil	KCDDKSPIPHVGWYTRCVDTEGIDFSLFQSDETVTP
Ga0222622_102284261	3300022756	Groundwater Sediment	KARELGGSADDKQPIPSIGWFARCVDPEGNRFSLFQPDESVPAPGES
Ga0247752_10739571	3300023071	Soil	AEDKTPIPHVGWFSHCTDTEGIAFSLFQSDESVQPG
Ga0209322_103839553	3300025146	Soil	PPIPEIGWFARCHDTEGNAFSIFQADASVPVPDAGQT
Ga0207692_102010491	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PIPGVGWFARCTDSEGNSFSLFQGDESVTMPEGAPGA
Ga0207642_102830062	3300025899	Miscanthus Rhizosphere	KQPIPAIGWFARCRDTEGNAFSLFQSDESVPAPDEG
Ga0207684_103012421	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QPIPNIGWFARCKDSEGNDFSLFQGDESAPMPEGMPGQ
Ga0207654_109730131	3300025911	Corn Rhizosphere	GSADEEQPIPAIGWFARCVDTEGNPFSLFQADESAPARDES
Ga0207657_114717612	3300025919	Corn Rhizosphere	ELGGSAEDKQPIPAIGWFARCRDTEGNAFSLFQSDESVPAPDEG
Ga0207665_103344304	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IPKIGWFSRCKDSEGNEFSLYQSDENAPMPEGMPGS
Ga0207661_116638722	3300025944	Corn Rhizosphere	REHGGKADEKLPIPHVGWFTRCTDTEGNDFSLFQSDESVTG
Ga0207678_106184402	3300026067	Corn Rhizosphere	ELGGSAEDKQPIPTIGWFARCVDTEGNPFSLFQPDDSVPAPGES
Ga0207702_109606921	3300026078	Corn Rhizosphere	ASIARARELGGSAEDKQPIPTIGWFARCVDTEGNPFSLFQPDDSVPAPGES
Ga0209689_12665931	3300027748	Soil	DEKQPIPGVGWFAGAKDSEGNAFSLFQSDESAAPPS
Ga0209073_105001641	3300027765	Agricultural Soil	SVAKVRALGGSADEEQPIPKIGWYARCVDTEGNPFSLFQADESAPSPDQS
Ga0209811_104381122	3300027821	Surface Soil	GSADDKQPIPSIGWFARCVDTEGNRFSLFQADESVPAPGEG
Ga0307322_102367242	3300028710	Soil	GSAEDKQPIPAIGWFARCRDTEGNAFSLFQSDESVPAPGEG
Ga0307319_100589881	3300028722	Soil	ADEKQPIPTIGWFARCRDTEGNEFSLFQADETVPAPGNEG
Ga0307299_100673462	3300028793	Soil	EDRQPIPAIGWFARCRDTEGNAFSLFQSDESVPAPGEGQDR
Ga0307305_103050523	3300028807	Soil	NKDPIPHVGWFARCKDTEGNSFSLFQSDESVAPPQ
Ga0307292_103475422	3300028811	Soil	ARARELGSAEDKQPIPGVGWFARCSDTEGNDFSLFQSDESVPAPGEG
Ga0307296_104787492	3300028819	Soil	EDKQPIPSIGWFARCKDSEGNDFSLYQSDENAPMPEGMPNQ
Ga0307308_104805551	3300028884	Soil	GKAEGKEAIPHVGWFARCEDTEGNKFSFFQSDESVPAPSA
Ga0308190_11345581	3300030993	Soil	NELGGSAEDKQAIPGIGWFARCEDTEGNPFSIFQADESVPIPTETQSREISD
Ga0302325_109786861	3300031234	Palsa	SVARVRECGGGSDDPSPIPHVGWFARCTDTEGNSFRLFQSDESAGA
Ga0307405_117568571	3300031731	Rhizosphere	TKVREHGGTADDKLPIPHVGWFTHCKDPEGNDFSLFQSEESASG
Ga0308176_119430222	3300031996	Soil	IRGLGGQAEGKTAIPHVGWFARCEDTEGNTFSLFQSDESVSAE
Ga0247830_114147491	3300033551	Soil	VNEHGGTADDKLPIPHVGWFTQCKDSEGNQFCLFQSDESVTG
Ga0334931_163658_384_533	3300034377	Sub-Biocrust Soil	VRESGGEAEDKQPIPTIGWFAGCKDPDGIEFSLFQGDDSAPMPEGAPPA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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