Metagenome Family F051374

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051374
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	53 residues
Representative Sequence	MRPTREFRAEPEVTETESDVSYRKIVLWVAVGLAIVAGVVSYFKYAKLLAPLLS
Number of Associated Samples	115
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.23 %
% of genes near scaffold ends (potentially truncated)	30.56 %
% of genes from short scaffolds (< 2000 bps)	84.72 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.278 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (13.889 % of family members)
Environment Ontology (ENVO)	Unclassified (36.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.389 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.34% β-sheet: 0.00% Coil/Unstructured: 53.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF02824	TGS	41.67
PF04972	BON	20.14
PF07973	tRNA_SAD	15.28
PF00133	tRNA-synt_1	4.86
PF02771	Acyl-CoA_dh_N	0.69
PF08669	GCV_T_C	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.86
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.86
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.86
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.86
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.28 %
Unclassified	root	N/A	34.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.28 %
Unclassified	root	N/A	34.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.28 %
Unclassified	root	N/A	34.72 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	61.11 %
Unclassified	root	N/A	34.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	61.11 %
Unclassified	root	N/A	34.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	26.39 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	26.39 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	26.39 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	16.67 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples	6.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.72 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	16.67 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	6.25 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_101511042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	724	Open in IMG/M
3300004153\|Ga0063455_100370799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300004479\|Ga0062595_102047856	Not Available	555	Open in IMG/M
3300005093\|Ga0062594_100824873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	862	Open in IMG/M
3300005166\|Ga0066674_10219736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	904	Open in IMG/M
3300005288\|Ga0065714_10488895	Not Available	530	Open in IMG/M
3300005327\|Ga0070658_10004665	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	11146	Open in IMG/M
3300005327\|Ga0070658_11075801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300005328\|Ga0070676_10032201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3002	Open in IMG/M
3300005328\|Ga0070676_10056076	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2327	Open in IMG/M
3300005329\|Ga0070683_100444919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	1236	Open in IMG/M
3300005329\|Ga0070683_101333528	Not Available	690	Open in IMG/M
3300005331\|Ga0070670_101331899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	658	Open in IMG/M
3300005333\|Ga0070677_10179633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1007	Open in IMG/M
3300005336\|Ga0070680_101027963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	712	Open in IMG/M
3300005337\|Ga0070682_100849491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	746	Open in IMG/M
3300005338\|Ga0068868_101813494	Not Available	576	Open in IMG/M
3300005339\|Ga0070660_100143398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1918	Open in IMG/M
3300005355\|Ga0070671_101008256	Not Available	730	Open in IMG/M
3300005356\|Ga0070674_100139309	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1819	Open in IMG/M
3300005366\|Ga0070659_100468472	Not Available	1071	Open in IMG/M
3300005437\|Ga0070710_10185858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1304	Open in IMG/M
3300005438\|Ga0070701_10300421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	987	Open in IMG/M
3300005441\|Ga0070700_100439520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	990	Open in IMG/M
3300005455\|Ga0070663_101601861	Not Available	581	Open in IMG/M
3300005518\|Ga0070699_100231690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1647	Open in IMG/M
3300005543\|Ga0070672_100505589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1046	Open in IMG/M
3300005544\|Ga0070686_101029793	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005547\|Ga0070693_100483031	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	876	Open in IMG/M
3300005547\|Ga0070693_101262040	Not Available	570	Open in IMG/M
3300005560\|Ga0066670_10397734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	844	Open in IMG/M
3300005564\|Ga0070664_100042658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3828	Open in IMG/M
3300005564\|Ga0070664_101380844	Not Available	666	Open in IMG/M
3300005614\|Ga0068856_102120922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	572	Open in IMG/M
3300005616\|Ga0068852_100635892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1073	Open in IMG/M
3300005834\|Ga0068851_10596766	Not Available	672	Open in IMG/M
3300005841\|Ga0068863_102131464	Not Available	571	Open in IMG/M
3300006173\|Ga0070716_101770435	Not Available	511	Open in IMG/M
3300006175\|Ga0070712_101338707	Not Available	624	Open in IMG/M
3300006806\|Ga0079220_11764641	Not Available	544	Open in IMG/M
3300006844\|Ga0075428_101463124	Not Available	716	Open in IMG/M
3300006876\|Ga0079217_10016075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2538	Open in IMG/M
3300006894\|Ga0079215_10148908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1114	Open in IMG/M
3300006918\|Ga0079216_10008589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3374	Open in IMG/M
3300009094\|Ga0111539_10415949	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1566	Open in IMG/M
3300009148\|Ga0105243_11538540	Not Available	690	Open in IMG/M
3300009174\|Ga0105241_10639567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	965	Open in IMG/M
3300009176\|Ga0105242_12592598	Not Available	556	Open in IMG/M
3300009789\|Ga0126307_10018820	All Organisms → cellular organisms → Bacteria	5181	Open in IMG/M
3300009789\|Ga0126307_10527310	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	953	Open in IMG/M
3300009789\|Ga0126307_10793361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	764	Open in IMG/M
3300009840\|Ga0126313_10060114	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	2707	Open in IMG/M
3300010036\|Ga0126305_10307893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1030	Open in IMG/M
3300010037\|Ga0126304_10342283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	994	Open in IMG/M
3300010037\|Ga0126304_10375553	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	947	Open in IMG/M
3300010037\|Ga0126304_10648258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	712	Open in IMG/M
3300010038\|Ga0126315_10927063	Not Available	580	Open in IMG/M
3300010039\|Ga0126309_10057765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1879	Open in IMG/M
3300010039\|Ga0126309_10643977	Not Available	673	Open in IMG/M
3300010041\|Ga0126312_10408535	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	966	Open in IMG/M
3300010042\|Ga0126314_10829201	Not Available	682	Open in IMG/M
3300010042\|Ga0126314_11443927	Not Available	517	Open in IMG/M
3300010044\|Ga0126310_10243572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1208	Open in IMG/M
3300010166\|Ga0126306_10248724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	1356	Open in IMG/M
3300010166\|Ga0126306_10403145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1070	Open in IMG/M
3300010166\|Ga0126306_10408606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1062	Open in IMG/M
3300010166\|Ga0126306_11032556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	671	Open in IMG/M
3300010166\|Ga0126306_11524693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	555	Open in IMG/M
3300010403\|Ga0134123_11352153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	750	Open in IMG/M
3300011119\|Ga0105246_11440482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	644	Open in IMG/M
3300012212\|Ga0150985_103193457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1450	Open in IMG/M
3300012212\|Ga0150985_110694145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	800	Open in IMG/M
3300012519\|Ga0157352_1061573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	585	Open in IMG/M
3300012909\|Ga0157290_10325462	Not Available	575	Open in IMG/M
3300013104\|Ga0157370_12000938	Not Available	519	Open in IMG/M
3300013307\|Ga0157372_12372950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	609	Open in IMG/M
3300015262\|Ga0182007_10315596	Not Available	578	Open in IMG/M
3300015371\|Ga0132258_10328079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3776	Open in IMG/M
3300015371\|Ga0132258_11749575	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1567	Open in IMG/M
3300015374\|Ga0132255_101661068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	969	Open in IMG/M
3300017792\|Ga0163161_10936650	Not Available	736	Open in IMG/M
3300018465\|Ga0190269_11001065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300018469\|Ga0190270_11839315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	661	Open in IMG/M
3300018476\|Ga0190274_11421008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	783	Open in IMG/M
3300018481\|Ga0190271_11858645	Not Available	713	Open in IMG/M
3300018482\|Ga0066669_11077297	Not Available	725	Open in IMG/M
3300019361\|Ga0173482_10201437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	815	Open in IMG/M
3300021445\|Ga0182009_10062003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1617	Open in IMG/M
3300022756\|Ga0222622_10035090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2710	Open in IMG/M
3300022756\|Ga0222622_10049866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2358	Open in IMG/M
3300022756\|Ga0222622_10232243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1241	Open in IMG/M
3300025315\|Ga0207697_10154687	Not Available	999	Open in IMG/M
3300025315\|Ga0207697_10238748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	803	Open in IMG/M
3300025893\|Ga0207682_10011831	All Organisms → cellular organisms → Bacteria	3409	Open in IMG/M
3300025901\|Ga0207688_10128072	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1486	Open in IMG/M
3300025904\|Ga0207647_10261568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	991	Open in IMG/M
3300025907\|Ga0207645_10071726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	2217	Open in IMG/M
3300025909\|Ga0207705_10006733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	8495	Open in IMG/M
3300025911\|Ga0207654_10267561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1152	Open in IMG/M
3300025917\|Ga0207660_10666559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	848	Open in IMG/M
3300025920\|Ga0207649_10738301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	765	Open in IMG/M
3300025933\|Ga0207706_11031946	Not Available	690	Open in IMG/M
3300025937\|Ga0207669_11363439	Not Available	603	Open in IMG/M
3300025939\|Ga0207665_11598971	Not Available	517	Open in IMG/M
3300025940\|Ga0207691_10853086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	764	Open in IMG/M
3300025942\|Ga0207689_10633593	Not Available	900	Open in IMG/M
3300025944\|Ga0207661_11089704	Not Available	735	Open in IMG/M
3300026067\|Ga0207678_10333990	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300026121\|Ga0207683_10863715	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300026142\|Ga0207698_10289779	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1519	Open in IMG/M
3300027637\|Ga0209818_1006393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2297	Open in IMG/M
3300027886\|Ga0209486_11229575	Not Available	515	Open in IMG/M
3300028709\|Ga0307279_10123402	Not Available	501	Open in IMG/M
3300028778\|Ga0307288_10239346	Not Available	709	Open in IMG/M
3300028778\|Ga0307288_10263940	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	678	Open in IMG/M
3300030336\|Ga0247826_10200880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	1364	Open in IMG/M
3300030496\|Ga0268240_10031645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1064	Open in IMG/M
3300030514\|Ga0268253_10094498	Not Available	859	Open in IMG/M
3300031231\|Ga0170824_112557903	Not Available	634	Open in IMG/M
3300031548\|Ga0307408_100080955	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	2427	Open in IMG/M
3300031548\|Ga0307408_101047152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	754	Open in IMG/M
3300031716\|Ga0310813_10516080	Not Available	1046	Open in IMG/M
3300031731\|Ga0307405_10405766	Not Available	1068	Open in IMG/M
3300031731\|Ga0307405_10735464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	820	Open in IMG/M
3300031824\|Ga0307413_10387980	Not Available	1090	Open in IMG/M
3300031903\|Ga0307407_10595773	Not Available	822	Open in IMG/M
3300031911\|Ga0307412_12169067	Not Available	517	Open in IMG/M
3300031938\|Ga0308175_100165989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2135	Open in IMG/M
3300031938\|Ga0308175_100173991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2092	Open in IMG/M
3300031938\|Ga0308175_100341006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1544	Open in IMG/M
3300031939\|Ga0308174_10001300	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	11521	Open in IMG/M
3300031939\|Ga0308174_10015702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4545	Open in IMG/M
3300031939\|Ga0308174_10261455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1349	Open in IMG/M
3300031944\|Ga0310884_10254884	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	961	Open in IMG/M
3300031996\|Ga0308176_11720166	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	669	Open in IMG/M
3300032002\|Ga0307416_101916545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	696	Open in IMG/M
3300032002\|Ga0307416_103524831	Not Available	524	Open in IMG/M
3300032013\|Ga0310906_11173433	Not Available	558	Open in IMG/M
3300032017\|Ga0310899_10240819	Not Available	818	Open in IMG/M
3300032074\|Ga0308173_11451911	Not Available	644	Open in IMG/M
3300033412\|Ga0310810_10659915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	985	Open in IMG/M
3300034818\|Ga0373950_0154528	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.25%
Host-Associated	Host-Associated	43.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.17%
Plants	Host-Associated → Plants	43.75%
Aquatic	Environmental → Aquatic	2.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.19%
Sediment	Environmental → Aquatic → Sediment	2.08%
Phylloplane	Host-Associated → Plants → Phylloplane	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.19%
Loam	Environmental → Terrestrial → Soil → Loam	11.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.08%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.08%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.08%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.39%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1015110421	3300004114	Soil	MRPTRQFRSETETTETEPAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG*
Ga0063455_1003707992	3300004153	Soil	MRPTRQFRSETEITETESTVSSRKIILWVVVGLAIIAGVVLYFKYAHLLSPLLG*
Ga0062595_1020478561	3300004479	Soil	PHMRPTRQFRSETEITETESAVSYRKIILWAIVGLAIVAGVVLYFKYAHLLSPLMG*
Ga0062594_1008248732	3300005093	Soil	MRPNRESRAEPEITETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0066674_102197362	3300005166	Soil	MRPTRESRAEPEVTETESDVSYRRVVLWAVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0065714_104888952	3300005288	Miscanthus Rhizosphere	RRPPETGLHMRPNRESRAEPEITETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0070658_100046658	3300005327	Corn Rhizosphere	MRPTRQFRSETDITETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG*
Ga0070658_110758012	3300005327	Corn Rhizosphere	MRPTRQFRSETEITETESAVPYRRIILWVIVGLAIVVGVVMYFKYAHLLTPLLG*
Ga0070676_100322013	3300005328	Miscanthus Rhizosphere	MRPTRQFRSETEITETESAVPYRKIILWVVVGLAIVVGVVMYFKYAHLLTPLLG*
Ga0070676_100560762	3300005328	Miscanthus Rhizosphere	MRPTRQVRPETEISDSESDVSYRKIILWVVVGLAIVAGVISYFKYGHLLAPLVS*
Ga0070683_1004449192	3300005329	Corn Rhizosphere	MRPTSESRVDPEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0070683_1013335281	3300005329	Corn Rhizosphere	MRPTRQFRSETEITETESTVSARKIILWVVVGLAILAGVVLYFKYAHLLSPLLG*
Ga0070670_1013318992	3300005331	Switchgrass Rhizosphere	MRSTREFRAEPETTETESEVSYRKVVLWVVVGLAIVAGVVSYFKYAK
Ga0070677_101796332	3300005333	Miscanthus Rhizosphere	MRPTRQVRSETETTETESDVSYRQIILWVVVGLAIVAGVISYFKYGHLLAPLVS*
Ga0070680_1010279632	3300005336	Corn Rhizosphere	MRPTRQFRSETETTETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG*
Ga0070682_1008494911	3300005337	Corn Rhizosphere	MSSMREFRAGPETTESENDVSYRKVVLWTVVGLAIVAGVVAYFKYAKLLAPLLS*
Ga0068868_1018134941	3300005338	Miscanthus Rhizosphere	PSETGLHMRPSREFRVDPEMTETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0070660_1001433982	3300005339	Corn Rhizosphere	MRPTRQFRSETEITETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG*
Ga0070671_1010082561	3300005355	Switchgrass Rhizosphere	TRQFRSETDITETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG*
Ga0070674_1001393093	3300005356	Miscanthus Rhizosphere	MRPTRESRVDSEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0070659_1004684722	3300005366	Corn Rhizosphere	NGPHMRPTRQFRSETEITETESAVSYRKIILWAIVGLAIVAGVVLYFKYAHLLSPLMG*
Ga0070710_101858582	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTREFRSETEITETESAVPYRKIILWAVVGLAIIVGVVMYFKYAHLLTPLLG*
Ga0070701_103004212	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTRQFRSETEITETESAVSYRKIILWAIVGLAIVAGVVLYFKYAHLLSPLMG*
Ga0070700_1004395202	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTREARIEPDVTETENDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0070663_1016018611	3300005455	Corn Rhizosphere	PTRQFRSETDITETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG*
Ga0070699_1002316902	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTREIRSDTEVTETEGEVSPRTIILWTIVGLAIIAGVVSYFKYARLLAPLIG*
Ga0070672_1005055892	3300005543	Miscanthus Rhizosphere	MRPTREARIEPDVTETENDVSYRKIVLWVAVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0070686_1010297932	3300005544	Switchgrass Rhizosphere	TRQVRPETEISDSESDVSYRKIILWVVVGLAIVAGVISYFKYGHLLAPLVS*
Ga0070693_1004830312	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTRQFRSETETTETDSAVSSRRIILWVIVGLAIVVGVVAYFRYAHLLSPLIG*
Ga0070693_1012620401	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	NGPHMRPTRQFRSETEITETESAVPYRKIILWVVVGLAIVVGVVMYFKYAHLLTPLLG*
Ga0066670_103977341	3300005560	Soil	MRPTRQFRSETEITETESAVSYRKIILWSVVGLAIVAGVVLYFKYAHLLAPLIS*
Ga0070664_1000426583	3300005564	Corn Rhizosphere	MRSTREFRAEPETTETESEVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0070664_1013808441	3300005564	Corn Rhizosphere	TGLLMRPTREARIEPDLTETENDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0068856_1021209222	3300005614	Corn Rhizosphere	MRPTRQLRPETEIPETDAPVPYRRIVLWVVVGLAIIVGVVAYFKYAHLLAP
Ga0068852_1006358922	3300005616	Corn Rhizosphere	MRPTSESRVEPEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0068851_105967661	3300005834	Corn Rhizosphere	PENGPHMRPTRQFRSETEITETESTVSARKIILWVVVGLAILAGVVLYFKYAHLLSPLLG
Ga0068863_1021314641	3300005841	Switchgrass Rhizosphere	PTRQFRSETEITETESAVPYRKIILWVVVGLAIVVGVVMYFKYAHLLTPLLG*
Ga0070716_1017704352	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FRSETEITETESAVSYRKIILWGIVGLAIVVGVVMYFKYQRLLAPLLG*
Ga0070712_1013387072	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTRQVRSETEITETESAVSYRKIILWGIVGLAIVVGVVMYFKYQRLLAPLLG*
Ga0079220_117646411	3300006806	Agricultural Soil	MRSTREFRAGPETTETENDVSYRKAVLWTIVGIAIVAGLVAYFKYAKLVAPLLG*
Ga0075428_1014631241	3300006844	Populus Rhizosphere	MRPTREFRVEPEVTETENVSYRKIVLWVAVGLAIVAGVVSYFRYAKLLAPFLG*
Ga0079217_100160752	3300006876	Agricultural Soil	MRPTSEVRAEPEITETEQEVSYRKIVLWVLVGLAIVAGVVSYFKYAKLLAPLLS*
Ga0079215_101489082	3300006894	Agricultural Soil	MRPTREFRVEPDVTETESDVSYRKIVLWVAVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0079216_100085892	3300006918	Agricultural Soil	MRPTSEVRAEPEITETEQEVSHRKIVLWVLVGLAIVAGVVSYFKYAKLLAPLLS*
Ga0111539_104159493	3300009094	Populus Rhizosphere	MRPTRESRAEPEITETENDVSYRKIVLWVVVGLAIVAGVVSYFRYAKLLAPLLG*
Ga0105243_115385402	3300009148	Miscanthus Rhizosphere	MRPTRQIRSETEITETESAVPYRKIILWVVVGLAIVVGVVMYFKYAHLLTPLLG*
Ga0105241_106395671	3300009174	Corn Rhizosphere	MSSMREFRAGPETTESENDVSYRKVVLWTVVGLAIVAGVVAYFKYAKLLAPLVG*
Ga0105242_125925982	3300009176	Miscanthus Rhizosphere	MRPTRESRVDSEITETGNDVSYRKIVLLVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0126307_100188204	3300009789	Serpentine Soil	MRPTHEFRGEPEITETENAVSYRKIVLWVLVGVAVVAGVVSYFKYAKLLAPLLS*
Ga0126307_105273101	3300009789	Serpentine Soil	TREARIEPDVTETENDVSYRKIVLWVAVGLAIVAGVVSYFKYAKFLAPLLG*
Ga0126307_107933611	3300009789	Serpentine Soil	MRPTRESRAEPDITEAESDVSYRRIVLWVVVGLAVVAGVLSYFKYAKLLAPLLS*
Ga0126313_100601143	3300009840	Serpentine Soil	MRPTHEVRVEPEITETESEVSYRRIVLWVLVGLAIVAGVVAYFKYAKLLAPLLS*
Ga0126305_103078932	3300010036	Serpentine Soil	MRPTREVRVDPDVTETENDVSYQKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0126304_103422832	3300010037	Serpentine Soil	MRPTHEFRGEPEITETENAVSYRKIVLWVLVGVAVVAGVVSYFKYAK
Ga0126304_103755532	3300010037	Serpentine Soil	MRPTREFRVETEITETENDVSYRRVVLWVVVGLAIAAGVVSYFKYAKLLAPLLG*
Ga0126304_106482582	3300010037	Serpentine Soil	MRPTREARIEPDVTETENDVSYRKIVLWVAVGLAIVAGVVSYFKYAKFLAPLLG*
Ga0126315_109270632	3300010038	Serpentine Soil	MRPTREFRAEPEITETENEVSYRKIVLWVIVGLAVIVGVVSYFKYAKLLAPLLS*
Ga0126309_100577652	3300010039	Serpentine Soil	MRPTHESRAEPEITENESEVSYRKIVLWVLVGVAVVVGLVSYFKYAKLLAPLLS*
Ga0126309_106439772	3300010039	Serpentine Soil	MRPTHEVRVDPEITETENEISYRKIVLWVLVGLAVVAGVVSYFKYAKLLAPLLS*
Ga0126312_104085352	3300010041	Serpentine Soil	MRPTHEVRVEPEITETESEVSYRKIVLWVLVGLAIVAGVVAYFKYAKLLAPLLS*
Ga0126314_108292012	3300010042	Serpentine Soil	EFRVEPEMTETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0126314_114439272	3300010042	Serpentine Soil	MRPSREFRAEPEITETDSDIPYRRGVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0126310_102435721	3300010044	Serpentine Soil	MRPTHEVRVEPEITETESEVSYRKIVLWVLVGLAIVAGVVAYFKYAKL
Ga0126306_102487241	3300010166	Serpentine Soil	MRPTHEVRAEPEITETDNEVSYRKIVLWVLVGLAVVAGVVSYFKYAKLLAPLLS*
Ga0126306_104031452	3300010166	Serpentine Soil	MRPTRESRAEPEITEAESDVSHRRIVLWVVVGLAVVAGVVSYFKYAKLLA
Ga0126306_104086062	3300010166	Serpentine Soil	MRPTRQFRSETEITEADAEISYRKVILWTVVGLAIVAGVVSYFKYARLLAPLIG*
Ga0126306_110325562	3300010166	Serpentine Soil	MRPTREVRVEPEITETESEVSYRKIVLWVLVGVAVVAGVVSYFKYAKLLAPLLS*
Ga0126306_115246932	3300010166	Serpentine Soil	MRSTREVRAEPEITETDQEVSYRKIVLWVLVGLAIVAGVVSYFKYAKLLAP
Ga0134123_113521532	3300010403	Terrestrial Soil	MRPTRQVRSETETTETESDVSYRKIILWVVVGLAIVAGVISYFKYGHLLAPLVS*
Ga0105246_114404822	3300011119	Miscanthus Rhizosphere	MRSTREFRAELETTETESEVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLA
Ga0150985_1031934572	3300012212	Avena Fatua Rhizosphere	MRPTRQVRSETEIAETESAVSYRKIILWVVVGLAITVGVVMYFKYAHLLAPLLG*
Ga0150985_1106941452	3300012212	Avena Fatua Rhizosphere	MRPTRQFRSETEITETESTVSSRKIILWVVVGLAIIAGVVLYFKY
Ga0157352_10615731	3300012519	Unplanted Soil	MRPTRQFRSETEITETESTVSARKIILWVIVGLAILAGVVLYFKYAHLLSPLLG*
Ga0157290_103254621	3300012909	Soil	EPEVTETESDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG*
Ga0157370_120009381	3300013104	Corn Rhizosphere	PETDIPETDAPVPYRRIVLWVVVGLAIIVGVVAYFKYAHLLTPLLG*
Ga0157372_123729501	3300013307	Corn Rhizosphere	MRPTSESRVEPEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAP
Ga0182007_103155961	3300015262	Rhizosphere	EGRPPPLRYRLHMRSTREVRAEPEMTETENDVSYRKVVLWVVVGLAIVAGVVAYFKYAKLLAPLLG*
Ga0132258_103280792	3300015371	Arabidopsis Rhizosphere	MRPTRQVRSETETTETESDVSYRKIILWVVVGLAIVAGVVSYFKYGHLLAPLVS*
Ga0132258_117495752	3300015371	Arabidopsis Rhizosphere	MRPTRQVRSETEISDSDSPVPYRKIVLWVVVGLAVVVGVVMYFKYSHLLAPLLG*
Ga0132255_1016610682	3300015374	Arabidopsis Rhizosphere	MRPTRQFRSETEISETESAVSYRKIILWAIVGLAIVAGVVLYFKYAHLLSPMMG*
Ga0163161_109366501	3300017792	Switchgrass Rhizosphere	MRPTRQIRSETEITETESAVPYRKIILWVVVGLAIVVGVVMYFKYAHLLTPLLG
Ga0190269_110010652	3300018465	Soil	MRPTREFRAEPEITENESDVSYRKIVLWVLVGVAVVAGIVSYFKYAKLLAPLLS
Ga0190270_118393152	3300018469	Soil	MRPTREFRVEPDVTETESDVSYRKIALWVAVGLAIVAGVVSYFKYAKLLAPLLG
Ga0190274_114210082	3300018476	Soil	MRPTREFRTEPEVTETETDVSYRRIVLWVAVGLAIVAGVVSYFKYAKLLAPLLG
Ga0190271_118586452	3300018481	Soil	VEPDVTETESDVSYRKIALWVAVGLAIVAGVVSYFKYAKLLAPLLG
Ga0066669_110772972	3300018482	Grasslands Soil	MRPTRESRAEPEVTETESDVSYRRVVLWAVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0173482_102014371	3300019361	Soil	MRPTRQFRSETEITETESAVSYRKIILWAIVGLAIVAGVVLYFKYAHLLSPLMG
Ga0182009_100620032	3300021445	Soil	MRSTREFRAGPETTETENDVSYRKAVLWVVVGVAIVAGLVAYFKYAKLLAPLLG
Ga0222622_100350903	3300022756	Groundwater Sediment	MRPTSESRVDPEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0222622_100498662	3300022756	Groundwater Sediment	MRPTREFRVEPEVTETENDVSRRKIVLWVVVALAIVVGVVSYFRYAKFLAPLLG
Ga0222622_102322432	3300022756	Groundwater Sediment	MRPTRQVRSETETTETESDVSYRKIILWVVVGLAIVAGVVSYFKYGHLLAPLVS
Ga0207697_101546872	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTRQFRSETEITETESAVPYRKIILWVVVGLAIVAGVISYFKYGHLLAPLVS
Ga0207697_102387481	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRPNRESRAEPEITETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0207682_100118314	3300025893	Miscanthus Rhizosphere	MRPTREARIEPDVTETENDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0207682_102672712	3300025893	Miscanthus Rhizosphere	TEISDSESDVSYRKIILWVVVGLAIVAGVISYFKYGHLLAPLVS
Ga0207688_101280722	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTRQVRPETEISDSESDVSYRKIILWVVVGLAIVAGVISYFKYGHLLAPLVS
Ga0207647_102615682	3300025904	Corn Rhizosphere	MRPTRQFRSETEITETESAVSYRKIILWAIVGLAIVAGVVLYFKYAHLLSPLIG
Ga0207645_100717262	3300025907	Miscanthus Rhizosphere	RQIRSETEITETESAVPYRKIILWVVVGLAIVVGVVMYFKYAHLLTPLLG
Ga0207705_100067335	3300025909	Corn Rhizosphere	MRPTRQFRSETDITETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG
Ga0207654_102675613	3300025911	Corn Rhizosphere	MSSMREFRAGPETTESENDVSYRKVVLWTVVGLAIVAGVVAYFKYAKLLAPLLS
Ga0207660_106665592	3300025917	Corn Rhizosphere	MRPTRQFRSETETTETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG
Ga0207649_107383011	3300025920	Corn Rhizosphere	MRSTREFRAEPETTETESEVSYRKVVLWVVVGLAIVAGVVSYFKY
Ga0207706_110319462	3300025933	Corn Rhizosphere	MRPTRQFRSETEITETESAVPYRKIILWVVVGLAIVVGVVMYFKYAHLLTPLLG
Ga0207669_113634391	3300025937	Miscanthus Rhizosphere	MRPTRESRVDSEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0207665_115989711	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RSETEITETESTVSTRKVVLWVVVGLAILAGVVLYFKYAHLLSPLLG
Ga0207691_108530861	3300025940	Miscanthus Rhizosphere	MRPTREARIEPDVTETENDVSYRKIVLWVAVGLAIVAGVVSYFKYAKL
Ga0207689_106335932	3300025942	Miscanthus Rhizosphere	MRPNRESRAEPEITETENDVSYRKVVLWVVVGLAIVAGVVSYFKHAKLLAPLLG
Ga0207661_110897042	3300025944	Corn Rhizosphere	MRPTRQFRSETEITETESTVSARKIILWVVVGLAILAGVVLYFKYAHLLSPLLG
Ga0207678_103339902	3300026067	Corn Rhizosphere	MRPTRQFRSETDITETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLMG
Ga0207683_108637153	3300026121	Miscanthus Rhizosphere	SETDITETESAVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG
Ga0207698_102897791	3300026142	Corn Rhizosphere	MRPTSESRVEPEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0209818_10063933	3300027637	Agricultural Soil	MRPTSEVRAEPEITETEQEVSYRKIVLWVLVGLAIVAGVVSYFKYAKLLAPLLS
Ga0209486_112295752	3300027886	Agricultural Soil	MRPTREFRVEPDVTETESDVSYRKIVLWVAVGLAIVAGVVSYFKYAKLLAPLLG
Ga0307279_101234022	3300028709	Soil	MRPTHEVRAEPEITETESEVSYRKIVLWVIVGIAIVVGVVSYFKYAKLLAPLLS
Ga0307288_102393462	3300028778	Soil	TSESRVEPEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0307288_102639401	3300028778	Soil	MRPTSESRVDPEITETGNDVSYRKIVLWVVVGLAIVAGVVSYFKYAKLLAPL
Ga0247826_102008801	3300030336	Soil	EVRVEPDVTETENDVSYRKIVLWAVVGLAIVAGVVSYFKYARLLAPLLG
Ga0268240_100316452	3300030496	Soil	MRSTREFRPGPETTETENDVSYRKVVLWVVVGLAIVAGVVAYFKYAKLIAPLLS
Ga0268253_100944981	3300030514	Agave	RHPKTPVMRRTRELRAEPEMTENESDVSYRRIVFWVVVGAVVAAGVVSYFKYAKLLAPLL
Ga0170824_1125579032	3300031231	Forest Soil	MRPTRQVRSETEITETESAVSYRKIILWAVVGLAVLAGVVLYFKYAHLLSPLLG
Ga0307408_1000809552	3300031548	Rhizosphere	MRPSREIRAEPETMETEQEVSYRKIVLWVVVGLAIVAGIVSYFKYAKLLAPLLT
Ga0307408_1010471522	3300031548	Rhizosphere	MRPTREFRAEPEITETEQEVSYRKIVMWVLVGLAVIVGVVSYFKYAKLLAPLLS
Ga0310813_105160801	3300031716	Soil	MRPTREVRPESEITETEGDVSFRKIILWVIVGLVVVAGVVSYFKYARLLPPLMG
Ga0307405_104057661	3300031731	Rhizosphere	RPSREIRAEPETMETEQEVSYRKIVLWVVVGLAIVAGIVSYFKYAKLLAPLLT
Ga0307405_107354642	3300031731	Rhizosphere	MRPTREFRAEPEITETEQEVSYRKIVLWVLVGLAIVAGVVSYFKYAKLLAPLVS
Ga0307413_103879802	3300031824	Rhizosphere	MRPSREIRAEPETMETEQEVSYRKIVLWVVVGLAIIAGIVSYFKYAKLLAPLLT
Ga0307407_105957732	3300031903	Rhizosphere	LQMRPSREIRAEPETMETEQEVSYRKIVLWVVVGLAIIAGIVSYFKYAKLLAPLLT
Ga0307412_121690671	3300031911	Rhizosphere	MRPTREFRAEPEVTETESDVSYRKIVLWVAVGLAIVAGVVSYFKYAKLLAPLLS
Ga0308175_1001659892	3300031938	Soil	MRPTRQFRSETEIPETESAVSYRKIILWAVVGLAIVAGVVAYFKYAHLLSPLIG
Ga0308175_1001739911	3300031938	Soil	MRSTREFRAEPETTETESDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLT
Ga0308175_1003410062	3300031938	Soil	MRPTREFRAEPEITETDNDVSYKRVVLWVLVGLAIVAGVVSYFKYAKLLAPLLG
Ga0308174_100013003	3300031939	Soil	MRPTRQFRSETEITETESAVPYRRIILWVIVGLAIVVGVVMYFKYAHLLTPLLG
Ga0308174_100157024	3300031939	Soil	MRPTRDFRAEPEITESDNDVSYKRVVLWVLVGLAIVAGVVSYFKYAKLLAPLVG
Ga0308174_102614552	3300031939	Soil	MRPTRQLRPETDIPETDAPVPYRRIVLWVVVGLAIIVGVVAYFKYAHLLAPLLG
Ga0310884_102548842	3300031944	Soil	MRPNRESRAEPEITETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPL
Ga0308176_117201662	3300031996	Soil	MRSTREFRAEPETTETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLS
Ga0307416_1019165451	3300032002	Rhizosphere	MRPTREFRADPEVTETETDVSYRKIVLWVAVGLAIVAGVVSYFKYAKLLAPLLS
Ga0307416_1035248312	3300032002	Rhizosphere	MRPTREVRAEPEITDTESDVSYRKIVLWVVVGLAVVIGIVSYFRYAKLLAPLVG
Ga0310906_111734332	3300032013	Soil	MRPTREFRAEPEVTETETDVSYRKIVLWVAVGLAIVAGVVSYFKYAKLLAPLLG
Ga0310899_102408192	3300032017	Soil	ESRAEPEITETENDVSYRKVVLWVVVGLAIVAGVVSYFKYAKLLAPLLG
Ga0308173_114519112	3300032074	Soil	MRPSREFRAEPEITETENDVSYRKVVLWVFVGLAIVAGVVSYFKYAKLLAPLLG
Ga0310810_106599152	3300033412	Soil	MRPTRQFRSETEITETESTVSSRKIILWVIVGLAIVVGVVAYFKYAHLLSPLIG
Ga0334948_146691_28_192	3300034760	Sub-Biocrust Soil	MRPTREIRTETEITETDSAVSFRRVVLWCAVAIALVIGVVLYFKYERLLAPLLG
Ga0373950_0154528_374_526	3300034818	Rhizosphere Soil	RQFRSETEITETESAVSYRKIILWAIVGLAIVAGVVLYFKYAHLLSPLMG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051374

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences