Metagenome / Metatranscriptome Family F051111

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051111
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	81 residues
Representative Sequence	MAFKRITDEDVLEAIVELAGDGYCLAADLLPSLPKRTHADRRRALHRSINRGLVIQRRGPDGREHIAIASEGWRQLRAA
Number of Associated Samples	106
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.56 %
% of genes near scaffold ends (potentially truncated)	25.69 %
% of genes from short scaffolds (< 2000 bps)	84.03 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.972 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.056 % of family members)
Environment Ontology (ENVO)	Unclassified (29.861 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.139 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.32% β-sheet: 12.15% Coil/Unstructured: 49.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.28: 'Winged helix' DNA-binding domain	d3ctaa1	3cta	0.79
a.4.5.28: 'Winged helix' DNA-binding domain	d3ctaa1	3cta	0.79
a.4.5.28: 'Winged helix' DNA-binding domain	d2fbia1	2fbi	0.77
a.4.5.0: 'Winged helix' DNA-binding domain	d4hqma_	4hqm	0.77
a.4.5.28: 'Winged helix' DNA-binding domain	d2fbia1	2fbi	0.77
a.4.5.0: 'Winged helix' DNA-binding domain	d4hqma_	4hqm	0.77
a.4.5.0: 'Winged helix' DNA-binding domain	d3bpva_	3bpv	0.76
a.4.5.0: 'Winged helix' DNA-binding domain	d3l7wa_	3l7w	0.76
a.4.5.0: 'Winged helix' DNA-binding domain	d3bpva_	3bpv	0.76
a.4.5.0: 'Winged helix' DNA-binding domain	d3l7wa_	3l7w	0.76

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF03176	MMPL	9.72
PF13304	AAA_21	8.33
PF00005	ABC_tran	6.94
PF02405	MlaE	6.25
PF08940	DUF1918	4.86
PF12697	Abhydrolase_6	2.78
PF00561	Abhydrolase_1	1.39
PF01329	Pterin_4a	1.39
PF00202	Aminotran_3	0.69
PF07690	MFS_1	0.69
PF09392	T3SS_needle_F	0.69
PF13905	Thioredoxin_8	0.69
PF13649	Methyltransf_25	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	9.72
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	9.72
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	6.25
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	1.39

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.97 %
Unclassified	root	N/A	34.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.97 %
Unclassified	root	N/A	34.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.97 %
Unclassified	root	N/A	34.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.31 %
Unclassified	root	N/A	34.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.31 %
Unclassified	root	N/A	34.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.50 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	36.81 %
Unclassified	root	N/A	34.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.03 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	31.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.03 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	20.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.86 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.08 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.03 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	20.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.86 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.08 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.03 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	20.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Streptomyces violaceusniger group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	4.86 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.08 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.03 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	20.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.50 %
Streptomyces violaceusniger	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces violaceusniger	2.78 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.08 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908036\|A5_v_NODE_17664_len_1380_cov_6_644928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1430	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig34885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4367	Open in IMG/M
2140918007\|ConsensusfromContig58249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5572	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2315203	Not Available	1404	Open in IMG/M
3300000891\|JGI10214J12806_11077003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300000955\|JGI1027J12803_106809494	Not Available	721	Open in IMG/M
3300000956\|JGI10216J12902_113717280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2732	Open in IMG/M
3300000956\|JGI10216J12902_121764082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	986	Open in IMG/M
3300001661\|JGI12053J15887_10538428	Not Available	557	Open in IMG/M
3300001686\|C688J18823_10153402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1578	Open in IMG/M
3300001686\|C688J18823_10174482	Not Available	1464	Open in IMG/M
3300002568\|C688J35102_117702260	Not Available	500	Open in IMG/M
3300002568\|C688J35102_117818991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300002568\|C688J35102_118038396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300002568\|C688J35102_118432485	Not Available	559	Open in IMG/M
3300002568\|C688J35102_118485298	Not Available	564	Open in IMG/M
3300002568\|C688J35102_118508843	Not Available	566	Open in IMG/M
3300002568\|C688J35102_119210919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300002568\|C688J35102_120024514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300002568\|C688J35102_120938022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2613	Open in IMG/M
3300003990\|Ga0055455_10028171	Not Available	1434	Open in IMG/M
3300004006\|Ga0055453_10006071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2587	Open in IMG/M
3300004081\|Ga0063454_101066105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300004081\|Ga0063454_101547492	Not Available	570	Open in IMG/M
3300004081\|Ga0063454_101654460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300004114\|Ga0062593_101413651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces violaceusniger	744	Open in IMG/M
3300004153\|Ga0063455_100089872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1224	Open in IMG/M
3300004153\|Ga0063455_100512844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300004153\|Ga0063455_100817952	Not Available	648	Open in IMG/M
3300004156\|Ga0062589_100727707	Not Available	886	Open in IMG/M
3300004157\|Ga0062590_102151739	Not Available	583	Open in IMG/M
3300004463\|Ga0063356_103923196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	640	Open in IMG/M
3300004463\|Ga0063356_104095943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	627	Open in IMG/M
3300004479\|Ga0062595_100017683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2596	Open in IMG/M
3300004479\|Ga0062595_100246069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1155	Open in IMG/M
3300004479\|Ga0062595_101439457	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300004479\|Ga0062595_102288105	Not Available	532	Open in IMG/M
3300004479\|Ga0062595_102453203	Not Available	519	Open in IMG/M
3300004643\|Ga0062591_100150219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300004643\|Ga0062591_102648965	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005332\|Ga0066388_100019295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5884	Open in IMG/M
3300005332\|Ga0066388_102718464	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300005332\|Ga0066388_103609130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300005332\|Ga0066388_108807954	Not Available	501	Open in IMG/M
3300005338\|Ga0068868_101690708	Not Available	596	Open in IMG/M
3300005440\|Ga0070705_100304802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1143	Open in IMG/M
3300005549\|Ga0070704_100020518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4262	Open in IMG/M
3300005713\|Ga0066905_100611063	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005764\|Ga0066903_100575290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1942	Open in IMG/M
3300005937\|Ga0081455_10299968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1153	Open in IMG/M
3300005983\|Ga0081540_1001015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	25170	Open in IMG/M
3300006046\|Ga0066652_100853311	Not Available	870	Open in IMG/M
3300006574\|Ga0074056_11846944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300006575\|Ga0074053_10007507	Not Available	525	Open in IMG/M
3300006576\|Ga0074047_10004158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1377	Open in IMG/M
3300006577\|Ga0074050_12037581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	786	Open in IMG/M
3300006578\|Ga0074059_11951088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1265	Open in IMG/M
3300006581\|Ga0074048_10063274	Not Available	601	Open in IMG/M
3300006904\|Ga0075424_102308536	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006953\|Ga0074063_14231022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1156	Open in IMG/M
3300009098\|Ga0105245_11616686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300009176\|Ga0105242_12355286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	579	Open in IMG/M
3300009553\|Ga0105249_12839778	Not Available	556	Open in IMG/M
3300009789\|Ga0126307_10003582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10645	Open in IMG/M
3300009789\|Ga0126307_10126044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2042	Open in IMG/M
3300009789\|Ga0126307_10145550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1895	Open in IMG/M
3300009789\|Ga0126307_10660096	Not Available	844	Open in IMG/M
3300009840\|Ga0126313_10119870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1956	Open in IMG/M
3300009840\|Ga0126313_10441229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300010036\|Ga0126305_10159924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1406	Open in IMG/M
3300010036\|Ga0126305_10392777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	913	Open in IMG/M
3300010036\|Ga0126305_10726634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300010037\|Ga0126304_10100369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1829	Open in IMG/M
3300010037\|Ga0126304_10586505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300010039\|Ga0126309_10006176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4683	Open in IMG/M
3300010039\|Ga0126309_10021609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2818	Open in IMG/M
3300010039\|Ga0126309_10182213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1151	Open in IMG/M
3300010040\|Ga0126308_10171610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1381	Open in IMG/M
3300010040\|Ga0126308_10351895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300010041\|Ga0126312_10015246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5131	Open in IMG/M
3300010041\|Ga0126312_11306393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	537	Open in IMG/M
3300010042\|Ga0126314_11152412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300010044\|Ga0126310_10013068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3936	Open in IMG/M
3300010045\|Ga0126311_10512633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300010166\|Ga0126306_10101171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2083	Open in IMG/M
3300010166\|Ga0126306_10379259	Not Available	1103	Open in IMG/M
3300010397\|Ga0134124_10957502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300010400\|Ga0134122_10362566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces violaceusniger	1267	Open in IMG/M
3300010403\|Ga0134123_10965217	Not Available	865	Open in IMG/M
3300011412\|Ga0137424_1009202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1278	Open in IMG/M
3300012200\|Ga0137382_10433373	Not Available	929	Open in IMG/M
3300012204\|Ga0137374_10068780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3502	Open in IMG/M
3300012354\|Ga0137366_10791065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	673	Open in IMG/M
3300012358\|Ga0137368_10441679	Not Available	847	Open in IMG/M
3300012901\|Ga0157288_10001724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2740	Open in IMG/M
3300012903\|Ga0157289_10238533	Not Available	613	Open in IMG/M
3300012907\|Ga0157283_10057196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	917	Open in IMG/M
3300012910\|Ga0157308_10083387	Not Available	909	Open in IMG/M
3300012912\|Ga0157306_10352069	Not Available	559	Open in IMG/M
3300012924\|Ga0137413_11267077	Not Available	590	Open in IMG/M
3300012944\|Ga0137410_11122090	Not Available	674	Open in IMG/M
3300012951\|Ga0164300_10024862	All Organisms → cellular organisms → Bacteria	2126	Open in IMG/M
3300012958\|Ga0164299_10025991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2476	Open in IMG/M
3300012986\|Ga0164304_11306298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	591	Open in IMG/M
3300015077\|Ga0173483_10048770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1611	Open in IMG/M
3300015200\|Ga0173480_10158212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1164	Open in IMG/M
3300015242\|Ga0137412_10464410	Not Available	972	Open in IMG/M
3300015245\|Ga0137409_11322394	Not Available	564	Open in IMG/M
3300015371\|Ga0132258_11579101	Not Available	1656	Open in IMG/M
3300015372\|Ga0132256_102630385	Not Available	603	Open in IMG/M
3300017654\|Ga0134069_1387058	Not Available	505	Open in IMG/M
3300017965\|Ga0190266_11220279	Not Available	522	Open in IMG/M
3300018061\|Ga0184619_10502455	Not Available	535	Open in IMG/M
3300018433\|Ga0066667_11517307	Not Available	593	Open in IMG/M
3300018465\|Ga0190269_10362244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	878	Open in IMG/M
3300019361\|Ga0173482_10456512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300019362\|Ga0173479_10456645	Not Available	632	Open in IMG/M
3300019881\|Ga0193707_1071744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1074	Open in IMG/M
3300019881\|Ga0193707_1168874	Not Available	592	Open in IMG/M
3300025556\|Ga0210120_1010004	Not Available	1895	Open in IMG/M
3300025901\|Ga0207688_10066730	Not Available	2036	Open in IMG/M
3300025981\|Ga0207640_10532221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300026035\|Ga0207703_12013358	Not Available	554	Open in IMG/M
3300026118\|Ga0207675_101726485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces violaceusniger	646	Open in IMG/M
3300028592\|Ga0247822_10286317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1256	Open in IMG/M
3300028715\|Ga0307313_10297094	Not Available	503	Open in IMG/M
3300028721\|Ga0307315_10106741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces violaceusniger	828	Open in IMG/M
3300028755\|Ga0307316_10112260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	957	Open in IMG/M
3300028784\|Ga0307282_10628294	Not Available	521	Open in IMG/M
3300028819\|Ga0307296_10240402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	985	Open in IMG/M
3300028828\|Ga0307312_10524373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	782	Open in IMG/M
3300028881\|Ga0307277_10131238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1079	Open in IMG/M
3300028884\|Ga0307308_10595379	Not Available	530	Open in IMG/M
3300030006\|Ga0299907_10172291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1789	Open in IMG/M
3300031152\|Ga0307501_10035793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1044	Open in IMG/M
3300031229\|Ga0299913_10032556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4915	Open in IMG/M
3300032180\|Ga0307471_103581602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	550	Open in IMG/M
3300032205\|Ga0307472_100216960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1470	Open in IMG/M
3300033433\|Ga0326726_10163578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2037	Open in IMG/M
3300033500\|Ga0326730_1043102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	883	Open in IMG/M
3300033550\|Ga0247829_10152549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1801	Open in IMG/M
3300033550\|Ga0247829_10705938	Not Available	840	Open in IMG/M
3300033550\|Ga0247829_11636939	Not Available	531	Open in IMG/M
3300033551\|Ga0247830_11598505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.58%
Host-Associated	Host-Associated	10.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.11%
Plants	Host-Associated → Plants	10.42%
Aquatic	Environmental → Aquatic	3.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.47%
Marine	Environmental → Aquatic → Marine	2.08%
Sediment	Environmental → Aquatic → Sediment	1.39%
Peat	Environmental → Terrestrial → Peat	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	18.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.22%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	11.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.08%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.39%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.06%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	11.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.47%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.39%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.39%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.39%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908036	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_v_00028970	2124908036	Soil	VEQAGDGFCLIADVLPSLPKLGHADRRRSLHRSVNRGLLIERRGPDGRTWVAVASEGWRQLRAA
A5_c1_01643810	2124908044	Soil	MCFPRFVEQAGDGFCLIADVLPSLPKLGHADRRRSLHRSVNRGLLIERRGPDGRTWVAVASEGWRQLRAA
A_all_C_00585850	2140918007	Soil	MCFPRVEQAGDGFCLIADVLPSLPKLGHADRRRSLHRSVNRGLLIERRGPDGRTWVAVASEGWRQLRAA
ICChiseqgaiiDRAFT_23152032	3300000033	Soil	MPLKRITDEHVLDAIVEKAGDGYCLAADVLPALPKRTHADRRRALHRCVTRGLLIERRGPDGRAYVALASEGWRQRRDAA*
JGI10214J12806_110770032	3300000891	Soil	MVFVQRGRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRVYVALASEGWREL
JGI1027J12803_1068094941	3300000955	Soil	ASIVELAGDGFCLLPDLLHSLPRFGHADRRRAVHRSTNRGLVIERRGPDGRTYVAIASEGWRRLRDAA*
JGI10216J12902_1137172802	3300000956	Soil	MAFKPITDEDVLSAIVETGGDGFCLASDVLPSLPKLTHADRWRALHRSVGRGFVIQRRGPDGRAYVAVASEGWRLLRLRAA*
JGI10216J12902_1217640822	3300000956	Soil	MALKRITDEDVLDSIVELAGDGYCLVPELLRQLPRRAHADRRRAVSRSINRGLVIERRGPDGRSYVAVASEGWRRLRAA*
JGI12053J15887_105384281	3300001661	Forest Soil	KRITDEEVLGSIIELAGDGYCLVPKLLPMLPKRTHADRRRALKRSINRGLVLERRGPDGRMHVAIASEGWRQLRAA*
C688J18823_101534021	3300001686	Soil	RRYGELRMSLPKITDDDVLAAIVEHAGDGYCLAADVLPSLPKLSHAERRRALHRAVSRGLVIERRGTDGRAYVAIASEGWRQLRAA*
C688J18823_101744822	3300001686	Soil	MAFKRISDEDVLSAIVELAGDGYCLAADVLPSLPRRSHADRRRALQRSVSRGFVIERRGPDGRVYVALASEGWRLLRAAA*
C688J35102_1177022601	3300002568	Soil	MAFKRITDEDVLAVIVDRAGDGYCLVADALSSLPKLSHADRRRAVHRSVSHGLLIQRRGPDGRAYVALASEGWRLLRAA*
C688J35102_1178189911	3300002568	Soil	MARKRITDEDVLSAIVDHAGDGYCLIADVLPSLPKFGHADRRRAVHRAINRGLLLERRGRDGRAYVAVASEGWR
C688J35102_1180383961	3300002568	Soil	VVAFRRITDQDVLAAIAERAGDGYCLSAELLPSLPKLSHADRRRALHRAVARGLVIERRGPDGRAHVAIASEGWRQLRAA*
C688J35102_1184324852	3300002568	Soil	MMFKPITDDDVLSSIDKLAGDGFCLSADVLSSLPKLSHADRRRALHRAVSRGLVIERRGPDGRAHVAIASEGWRQLRAA*
C688J35102_1184852981	3300002568	Soil	MAFKRISDEDVLSAIVELAGDGYCLAADVLPSLPRRSHADRRRALHRSVSRGFVIERRGPDGRAYVTLASEGWRLLRAAA*
C688J35102_1185088431	3300002568	Soil	MPFKRITDEHVLNAIVELSGDGFCLLSDVLPSLPRRSHADRRRAIHYAINRGLLIQRRAPDGRLHVALASEGWRQLRAA*
C688J35102_1192109191	3300002568	Soil	MAFKRITDQDVLSAIVERAGDGYCLLADVLPSLPKLSHADRRRAVHRAVSRGLVIERRGPEGRAYIAVASEGWRQLRAA*
C688J35102_1200245141	3300002568	Soil	MAFKRIADEDVLEAIEALAGDGYCLTADLLPSLPKRTHADRRRALHRSINRGLVIQRRGPDGREHVAIASEGWRRLR
C688J35102_1209380223	3300002568	Soil	MGLPKITDEIVLAAIVELAGDGYCLVPELIPRMPRRSHLDRRSALSRSINRGLVLERRGPDGRAYVALTSEGWRRLRAAA*
Ga0055455_100281712	3300003990	Natural And Restored Wetlands	LTCAALDAATVIGVALKRITDEDVLDTIVELAGDGYCLVPELVLTLPKRSHADRQRALKRSINRGLVLERRGPDGRMHVAIASEGWRQLRAA*
Ga0055453_100060712	3300004006	Natural And Restored Wetlands	LTCAALDAATVIGVALKRITDEDVLDAIVELAGDGYCLVPELVLTLPKRSHADRQRALKRSINRGLVLERRGPDGRMHVAIASEGWRQLRAA*
Ga0063454_1010661052	3300004081	Soil	MALKRITDEDILNSIVELAGDGYCIVPELLLTLPRRSHRDRYRALRRSINRGLVLERRGPDGRMHVAIASEGWRQLRAA*
Ga0063454_1015474921	3300004081	Soil	KITDDDVLAAIVEHAGDGYCLAADVLPSLPKLSHAERRRALHRAVSRGLVIERRGTDGRAYVAIASEGWRQLRAA*
Ga0063454_1016544602	3300004081	Soil	MALKRITDQDVLGSIVELAGDGYCPVSKLLPSLPKRTHADRRRAVHRSINRGLVIERRAPDGTVHVALASEGWRELRMRAV*
Ga0062593_1014136511	3300004114	Soil	MPLKRITDEHVLDAVVEKAGDGYCLAADVLAALPKRSHADRRRALHLCVTRGLLIERRGPEGRAYVALASEGWRQRRDAA*
Ga0063455_1000898722	3300004153	Soil	KGANRIGSVPAATVTVMMFKPITDDDVLSSIDKLAGDGFCLSADVLSSLPKLSHADRRRALHRAVSRGLVIERRGPDGRAHVAIASEGWRQLRAA*
Ga0063455_1005128442	3300004153	Soil	MSLPKITDDDVLAAIVEHAGDGYCLAADVLPSLPKLSHAERRRALHRAVSRGLVIERRGTDGRAYVAIASEGWRQLRAA*
Ga0063455_1008179521	3300004153	Soil	MAFKGITDDDVLSAVVERTGDGYCLVAEVLPSLPRLGHADRRRAVHRAVSRGLLIKRRGPDGREHVAVASEGWRQLRAA*
Ga0062589_1007277072	3300004156	Soil	MPLKRIKDEDVLEAVVDRAGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRSYVTISSEGWRQLRGWAA*
Ga0062590_1021517391	3300004157	Soil	MALRRITDEDVLTSIVELAGDGYCLVAELLPSLPKRTHADRRRALNRSVDRGLLIERRGPDGRMRVAVASEGWRQLRARAA*
Ga0063356_1039231961	3300004463	Arabidopsis Thaliana Rhizosphere	DVLEAVVDRAGDGYCLVADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRASAA*
Ga0063356_1040959432	3300004463	Arabidopsis Thaliana Rhizosphere	DEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRVYVALASEGWRELRAA*
Ga0062595_1000176833	3300004479	Soil	MALRRITDEDVLGSIVELAGDGYCLVAELLPSLPRRAHVDRSRALRRSINRGLVLERRGPDGRAYVAVASEGWRRLRARAA*
Ga0062595_1002460691	3300004479	Soil	MASKRIMDEDVLGSIVELVGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRAWAA*
Ga0062595_1014394572	3300004479	Soil	MPFKRITDEHVLDAIVEKAGDGYCLAADVLPALPKRTHADRRRALHRSVSRGLVIERRGPDGRAYVALASEGWRQRRDAA*
Ga0062595_1022881051	3300004479	Soil	MVFVQRGRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRVYVALASEGWRELRAA*
Ga0062595_1024532031	3300004479	Soil	MRSPRIPDEIVLASIVELAGDGYCPLSDLLHSLPQFGHADRRRAVYRSTNHGLVIERRGPDGRTYVAVASEGWRRLRDAA*
Ga0062591_1001502192	3300004643	Soil	MPLKRIKDEDVLEAVVDRAGDGYCLVADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRASAA*
Ga0062591_1026489651	3300004643	Soil	MRSPRITDEVVLASIVEIAGDGYCLLPDLLHSLPKFGHADRRRAVHRSVDRGLVIERRGPDGRAYVALTSEGWRQLRDAA*
Ga0066388_1000192957	3300005332	Tropical Forest Soil	MALPKVTDEIVLDAIVALAGDGYCPVSQLLPSLPKRTHADRRRAVHRAVNRGLVLERRGPDGRIWVALASEGWRQLRSRAA*
Ga0066388_1027184643	3300005332	Tropical Forest Soil	ARFKRITDEDVMKAIVERAGDGYFLAADLLRSLPRFTHADRHRALRRAVDRGLVLERRGPDGRQHVAISSEGWRLLRAPAA*
Ga0066388_1036091302	3300005332	Tropical Forest Soil	VRFKRITDEDVLGAIVELAGDGYCLARDLLPELPKRTHADRRRALHRSVNRGLVIERRGPDGRTYVAIASEGWRLLRAAA*
Ga0066388_1088079542	3300005332	Tropical Forest Soil	MAFQRITDDDVLRAIVELAGDGFCPVAEVIPSLPRRSHADRRRAVQRAVNRGLVIKRRAPDGRAHVALASEGWRLIRAA*
Ga0068868_1016907081	3300005338	Miscanthus Rhizosphere	RILDEDVLGSIVELAGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRA*
Ga0070705_1003048021	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MASKRILDEDVLGSIVELAGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRA*
Ga0070704_1000205181	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LASIVELAGDGYCLLTDLLSSLPKSGHADRRRAVHRSTNRGLVIERRGPDGRVYVAVASEGWRRLRDAA*
Ga0066905_1006110633	3300005713	Tropical Forest Soil	MAQKRITDEDVLKAIVERAGDGYCLAADLLPSLPKFAHADRHRALRRAVNRGLVLERRGPDGRQHVAISSEGWRLLRAQAA*
Ga0066903_1005752902	3300005764	Tropical Forest Soil	MRSKRITDEDVLGAIVELAGDGFCGLHDLVGSMPKRTHADRRRAVHRTVSRGLVIQRQGPDGRQYVALASEGWRRLRAVA*
Ga0081455_102999682	3300005937	Tabebuia Heterophylla Rhizosphere	MPRRRISDDDVLGAIVELAGDGYCLLAEVLPLFPSRFSHSDRRRAAYRAINRGLVIQRRGPDGREHVAVASEGWRQLRGRANLEV*
Ga0081540_100101510	3300005983	Tabebuia Heterophylla Rhizosphere	MASKPITDEHVLDAIVERGGDGFCLAADVLPDLPRRTHADRRRALHRCVRSGLVIERRGPDGRAYVALASEGWRRRRDAA*
Ga0066652_1008533111	3300006046	Soil	IVERGGDGYCLAADVLPQLPKRTHSDRRRAVHRCVRHGLVIQRRGPDGRNYVAVASEGWRLLRARAA*
Ga0074056_118469441	3300006574	Soil	MVFVERWRYLRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVAVASEGWRELRAA*
Ga0074053_100075071	3300006575	Soil	VEQADDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVAVASEGWRELRAA*
Ga0074047_100041582	3300006576	Soil	MVFVQRWRYLRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLKRRGPDGRVYVAVASEGWRELRAA*
Ga0074050_120375812	3300006577	Soil	LKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVAVASEGWRELRAA*
Ga0074059_119510882	3300006578	Soil	MVFVQRWRYLRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVAVASEGWRELRAA*
Ga0074048_100632741	3300006581	Soil	LMVFVQRWRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVAVASEGWRELRAA*
Ga0075424_1023085361	3300006904	Populus Rhizosphere	AAMRSPRITDEVVLASIVEIAGDGYCLLPDLLHSLPKFGHADRRRAVHRSVNRGLVIERRGPDGRAYVALTSEGWRQLRDAA*
Ga0074063_142310222	3300006953	Soil	VALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVAVASEGWRELRAA*
Ga0105245_116166862	3300009098	Miscanthus Rhizosphere	MPPRRITDEIVLASIVELAGDGYCLLPDLLHSLPKFGHADRRRAVHRSVDRGLVIERRGPDGRVYVALASEGWRRLRDAA*
Ga0105242_123552861	3300009176	Miscanthus Rhizosphere	MASKRITDEDVLGSIVELAGDGYCLSADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSE
Ga0105249_128397782	3300009553	Switchgrass Rhizosphere	RITDEIVLASIVELAGDGYCLLTDLLSSLPKSGHADRRRAVHGSTNRGLVIERRGPDGRVYVAVASEGWRRLRDAA*
Ga0126307_100035823	3300009789	Serpentine Soil	MALKRITDEDVLNAIVGQAGDGYCLVAELLPSFPKRTHSDRRRAVHRSVRRGLVIQRRGPDGRSYVALASEGWRLLRAA*
Ga0126307_101260442	3300009789	Serpentine Soil	MVPKRISDGDVLAAIVEQAGDGYCLVADLLPSLPKLSHADRRRALHRAVARGLVIERRGPDGRAHVAIASEGWRQLRAA*
Ga0126307_101455503	3300009789	Serpentine Soil	MALKRITEDDVLGAIVELAGDGYCLVAEVLPRFPSRFSHADRRRAVYRAVSRGLVLQRRGPDGREYVALASEGWRQLRARAA*
Ga0126307_106600962	3300009789	Serpentine Soil	MALRRITDEDVLASIVELAGDGFCLVAELLPSLPRRSHADRRRALKRSVNRGLVIERRGPDGRMHVAVASEGWRQLRAPAA*
Ga0126313_101198702	3300009840	Serpentine Soil	MGLKRITDEDVLEAIVEVGGDGYCLSADVLPLLPSRTHADRRRALGRSINRGLVIARRGPDGREHVAVASEGWRQLRARAA*
Ga0126313_104412291	3300009840	Serpentine Soil	MRRITDEHVLDAIVELAGDGYCLVPELFGKLPKRTHADRRRALNGSINRGLVLERRGPDGRMHVALTSEGWRLLRARAASQVARLA*
Ga0126305_101599242	3300010036	Serpentine Soil	MVPKRISDGDVLAAIVERAGDGYCLVADLLPSLPKLSHADRRRALHRAVARGLVIERRGPDGRAHVAIASEGWRQLRAA*
Ga0126305_103927772	3300010036	Serpentine Soil	AVKRISDDDVLTAVVERAGDGYCLIAEILPSLPKRGHRDRRRAVHRSVRWGLVIQRRGPDGRSYVALASEGWRLLRAA*
Ga0126305_107266341	3300010036	Serpentine Soil	MAPKRITDDDVLEAIVERAGDGYCLIADVLPLFPRRFSHADRRRAVHRATNRGLVIQRRGPDGRQHVAIASEGWRQLRARAA*
Ga0126304_101003691	3300010037	Serpentine Soil	MRRITDEHVLDAIVELAGDGYCLVSELFGKLPKRTHADRRRALNGSINRGLVLERRGPDGRMHVALTSEGWRQLRARAA*
Ga0126304_105865051	3300010037	Serpentine Soil	MALKRITDDDVLEAIVERAGDGYCLIADVLPLFPRRFSHADRRRAVHRATNRGLVIQRRGPDGRQHVAIASEGWRQLRARAA*
Ga0126309_100061765	3300010039	Serpentine Soil	MSVKRITDEDVLGAIVELAGDGYCPVAEVVPLFPSRFSHADRRRAVYRSVNRGLVIERRGPDGRSYVTIASEGWRQLRARAA*
Ga0126309_100216092	3300010039	Serpentine Soil	MAPKRITDEDVLGAIVELAGDGYCPVAEVLPLFPSRFSHADRRRAVYRSVNRGLVLERRGPDGRQHVAIASEGWRRLRAA*
Ga0126309_101822132	3300010039	Serpentine Soil	MAPRRRITDEDVLAAIAELAGDGYCLVADVLPLFPSRFSHADRRRAVYQSVNRGLLIERRGPDGRQHVAIASEGWRRLRAAA*
Ga0126308_101716102	3300010040	Serpentine Soil	MAFRPITDDDVLSAVLERAGDGYCLIAEVLPSLPKLGHRDRRRAMHRAINRGLLIERRGPDGREHVALASEGWRRLRAAA*
Ga0126308_103518952	3300010040	Serpentine Soil	MALKRIADEDVLNAIVGQAGDGYCLVAELLPSFPKRTHSDRRRAVHRSVRRGLVIQRRGPDGRSYVALASEGWRLLRAA*
Ga0126312_100152465	3300010041	Serpentine Soil	MRRITDEHVLDAIVELAGDGYCLVPELFGKLPKRTHADRRRALNGSINRGLVLERRGPDGRMHVALTSEGWRQLRARAA*
Ga0126312_113063932	3300010041	Serpentine Soil	MGLKRITDEDVLEAIVEVGGDGYCLAADVLPLLPSRMHADRRRALGRSINRGLVIARRGPDGREHVAVASEGWRQLRARAA*
Ga0126314_111524121	3300010042	Serpentine Soil	VLEAIVEVGGDGYCLSADVLPLLPSRTHADRRRALGRSINRGLVIARRGPDGREHVAVASEGWRQLRARAA*
Ga0126310_100130684	3300010044	Serpentine Soil	MALKRITDEDVLGSIVELAEDGYCLVPELMRVLPKLSHADRRRALNRSINRGLVLERRGPDGRMHVAVASEGWRQLRARAA*
Ga0126311_105126331	3300010045	Serpentine Soil	FVCVFCPGASLPSSVIALKRITEDDVLGAIVELAGDGYCLVAEVLPRFPSRFSHADRRRAVYRAVSRGLVLQRRGPDGREYVALASEGWRQLRARAA*
Ga0126306_101011713	3300010166	Serpentine Soil	MGLKRITDEDVLEAIVEVGGDGYCLSADVLPLLPSRTHADRRRALGRSINRGLVIAGRGPDGREHVAVASEGWRQLRARAA*
Ga0126306_103792592	3300010166	Serpentine Soil	VIRVALRRITDEDVLEAIVELAGDGYCLVPDLFPRLPKRTHADRRRALDRAVNKGLVLERRGPDGRMHVALASEGWRELRARAA*
Ga0134124_109575022	3300010397	Terrestrial Soil	MPPRRITDEIVLASIVELAGDGYCLLPDLLHSLPKLGHADRRRAIHGAVNRGLVIERRGPDGRVYVALASEGWRRLRDAA*
Ga0134122_103625662	3300010400	Terrestrial Soil	MASKRILDEDVLGSIVELAGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRAWAA*
Ga0134123_109652172	3300010403	Terrestrial Soil	MASKRITDEDVLGSIVELAGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRA*
Ga0137424_10092021	3300011412	Soil	MGLPRISDDDVLGAIVDLAGDGYCLASEVIPRLPRRTHADRRRAIHRSVNRGLVLERRGPDGRMWVAVASEGWRRLREEAA*
Ga0137382_104333732	3300012200	Vadose Zone Soil	VAPKQITDDDVLSAIVELAGDGYCLVPELLRVLPKRTHADRRRAVKRAVNHGLLLERRGPDGRVHVAVASEGWRQLRGRAA*
Ga0137374_100687802	3300012204	Vadose Zone Soil	MAPKRITDEDVLDSIVELAGDGYCLVPELLPMLPKRTHADRRRALKRSINRGLVIERRGPDGRMHVALASEGWRQLRARAA*
Ga0137366_107910651	3300012354	Vadose Zone Soil	SRSNAAVISATGLVATVKEMAAKRITDEDVLSAIVDRAGDGYCLIADVLPSLPKLSHADRRRAVHRAVGRGLVLQRRGPDGRAYVAVASEGWRQLRAA*
Ga0137368_104416793	3300012358	Vadose Zone Soil	MAPKRITDEDVLDSIVELAGDGYCLVPVLLPMLPKRTHADRRRALKRSINRGLVIERRGPDGRMHVALASEGWRQLRARAA*
Ga0157288_100017242	3300012901	Soil	MVFVQRWRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRVYVALASEGWRELRAA*
Ga0157289_102385332	3300012903	Soil	MVFVQRGRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRV
Ga0157283_100571962	3300012907	Soil	MVFVQRWRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVALASEGWRELRAA*
Ga0157308_100833872	3300012910	Soil	MVFVQRGRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVAVASEGWRELRAA*
Ga0157306_103520692	3300012912	Soil	MVFVQRWRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRVYVALASEGWRELRAALGSAAFIFAP*
Ga0137413_112670771	3300012924	Vadose Zone Soil	MAPKRITEGDVLAAIVELAGDGYCLVPELLLRLPKRSHADRRRALERSINRGLVLERRGPDGRMHAALASEGWRQLRAA*
Ga0137410_111220901	3300012944	Vadose Zone Soil	MALPKITDEIVLAAIVERAGDGYCLAAYVLPSLPKRNHRDRQRALKRSVNRGLVLERRGPDGRMHVAVASEGWRQLRAA*
Ga0164300_100248622	3300012951	Soil	VAFRRITDEDVLQAIRDVAGDGYCLAADLLPSLPKLGHADRRRALHRSVSRGLVLQRRGPDGREHVAIASEGWRQLRAA*
Ga0164299_100259912	3300012958	Soil	VAFRRITDEDVLQAIRDVAGDGYCLAADLLPSLPKFSHADRRRALRRSVGRGLVLQRRGPDGREHVAIASEGWRQLRAA*
Ga0164304_113062982	3300012986	Soil	VVELAGDGYCLLSDLLHLLPQLGHADRRRAVHRAVNRGLVIERRGPDGRVYVALASEGWRRLRAAA*
Ga0173483_100487703	3300015077	Soil	MVFVQRGRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRVYVA
Ga0173480_101582121	3300015200	Soil	MVFVQRGRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVYRSVSRGLVLQRRGPDGRVYVALASEGWRELRAA*
Ga0137412_104644102	3300015242	Vadose Zone Soil	LTCAVLDGAGFRCDAATPAATVTGMALKRITDDDVLAAIVELAGDGYCLVPELLLRLPKRSHADRRRALERSINRGLVLERRGPDGRMHAALASEGWR
Ga0137409_113223941	3300015245	Vadose Zone Soil	AAIVERAGDGYCLAAYVLPSLPKRNHRDRQRALKRSVNRGLVLERRGPDGRMHVAVASEGWRQLRAA*
Ga0132258_115791013	3300015371	Arabidopsis Rhizosphere	MASKRIIDEDVLGSIVELGGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRAWAA*
Ga0132256_1026303851	3300015372	Arabidopsis Rhizosphere	MASKRIIDEDVLGSIVELAGDGYCLIAEVLPLLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRAWAA*
Ga0134069_13870581	3300017654	Grasslands Soil	MAFKRITDEDVLEAIVELAGDGYCLAADLLPSLPKRTHADRRRALHRSINRGLVIQRRGPDGREHIAIASEGWRQLRAA
Ga0190266_112202792	3300017965	Soil	LGAIVELCGDGYCLVADVLPLFPGRFSHADRRRAVHRSVNRGLVIRRRGPDGREHVAVASEGWRLLRSRAA
Ga0184619_105024552	3300018061	Groundwater Sediment	VAPKRITDDDVLSAIVHRAGDGYCLVAEVLPSLPKLSHADRRRAVHRAVSHGLVLERRGPDGRMHVAIASEGWRQLRAA
Ga0066667_115173071	3300018433	Grasslands Soil	PPPALACVSMAPKRITDDDVLSAIVELAGDGYCLVPELLRVLPKRTHADRRRAVKRSVNHGLLLERRGPDGRVHVAVASEGWRQLRGRAA
Ga0190269_103622442	3300018465	Soil	MALRRITDEDVLGSIVELAGDGYCLVAELLPSLPRRAHVDRSRALRRSINRGLVLERRGPDGRAYVAVASEGWRRLRARAA
Ga0173482_104565122	3300019361	Soil	MRSPRITDEIVLASIVELAGDGYCLLPDLLHSLPKFGHAARRRAVHRSVNRGLVIERRGPDGRAYVALSSEGWRQLRDAA
Ga0173479_104566452	3300019362	Soil	MVFVQRGRYRRPVALKRITDEHVLKAIVEQAGDGYCLLADLLPSLPRRSHADRRRAVHRSVSRGLVLQRRGPDGRVYVALASEGWRELRAA
Ga0193707_10717441	3300019881	Soil	MALKRITDEDVLDSIVQLAGDGYCLAAELLRTLPRQAHADRRRALKRSINRGLVLERRGPDGRMHVAVASEGWRQLRAA
Ga0193707_11688741	3300019881	Soil	MMAVKRITDDDVLSAVVERAGDGFCLIADVLPSLPKLGHADRRRALHRSVNRGLLIERRGPDGRTWVAVASEGWRQLRAA
Ga0210120_10100042	3300025556	Natural And Restored Wetlands	LTCAALDAATVIGVALKRITDEDVLDAIVELAGDGYCLVPELVLTLPKRSHADRQRALKRSINRGLVLERRGPDGRMHVAIASEGWRQLRAA
Ga0207688_100667302	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRRITDEIVLASIVELAGDGYCLLPDLLHSLPKLGHADRRRAIHGAVNRGLVIERRGPDGRVYVALASEGWRRLRDAA
Ga0207640_105322213	3300025981	Corn Rhizosphere	MRSPRITDEVVLASIVEIAGDGYCLLPDLLHSLPKFGHADRRRAVHRSVNRGLVIERRGPDGRAYVALTSEGWRQLRDAA
Ga0207703_120133581	3300026035	Switchgrass Rhizosphere	MASKRITDEDVLGSIVELAGDGYCLSADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQLRA
Ga0207675_1017264852	3300026118	Switchgrass Rhizosphere	MASKRILDEDVLGSIVELAGDGYCLIADVLPSLPKRTHADRRRALHRTMNRGLLIQRRGPDGRTYVTISSEGWRQL
Ga0247822_102863172	3300028592	Soil	LKRITDEDVLGSIVELTGDGYCTVTELLPLLPKRTHADRRRAVHRSVNRGLVIQRRGPDGRQHVAIASEGWRLLRSRAA
Ga0307313_102970941	3300028715	Soil	TDEIVLQAIVDRAGDGYCLVADVLPSLPKLGHAARRRALHRSVNRGLLIERRGPDGRKWVAVASEGWRQLRAA
Ga0307315_101067411	3300028721	Soil	MAVRRITDEHVLEAIVELCGDGYCLVADVLPLFPSRFSHADRRRAVHRSVNRGLVLQRRGPEGREHVAVASEGWRLLRSRAA
Ga0307316_101122602	3300028755	Soil	MAVKRITDEHVLEAIVELCGDGYCLVADVLPLFPSRFSHADRRRAVHRSVNRGLVLQRRGPEGREHVAVASEGWRLLRSRAA
Ga0307282_106282942	3300028784	Soil	MALKRITDEIVLQAIVDRAGDGYCLVADVLPSLPRRTHADRRRALHRSVNRGLLIERRGPDGRKWVAVASEGWRQLRAA
Ga0307296_102404022	3300028819	Soil	MAVKRITDEIVLQAIVDRAGDGYCLVADVLPSLPRRTHADRRRALHRSVNRGLLIERRGPDGRKWVAVASEGWRQLRAA
Ga0307312_105243732	3300028828	Soil	MPPKRITDVDVLQTMADLAGDGYCLAAEVLHSLPKLSHADRRRAVHRAVSRGLVIERRGPDGRTHIAIASEGWRQLRAA
Ga0307277_101312382	3300028881	Soil	MAVTKITDEIVLATIVEQAGDGYCLAANVLPSLPKLSHAERRRALHRAVSRGLVIERRGPDGRAHVALASEGWRLLRAA
Ga0307308_105953792	3300028884	Soil	AIRDIAGDGYCLAADLLPSLPKFSHADRRRALHRSASRGLVLLRRGPDGREHVAIASEGWRQLRAA
Ga0299907_101722912	3300030006	Soil	VIRVALRRITDEDVLEAIVELAGDGYCLVPDLFPRLPKRTHADRRRALHRAVNKGLVLERRGPDGRMHVALASEGWRELRARAA
Ga0307501_100357932	3300031152	Soil	MPFKRITDEDVLNAIVELSGDGFCLLSDVLPSLPRRSHADRRRAIHYAINRGLLIQRQAPDGRLHVALASEGWRQLRAA
Ga0299913_100325563	3300031229	Soil	MAVQRITDEDVLAAIVDLAGDGYCLVRELIPVLPKRTHADRRRALNRAVNKGLVLERRGPDGRMHVALASEGWRELRARAA
Ga0307471_1035816022	3300032180	Hardwood Forest Soil	MPFKRITDEHVLDAIVEKAGDGYCLAADVLPALPKRTHADRRRAVHRCVSGGLVIERRGPDGRAYVALASEGWRRRRDAA
Ga0307472_1002169602	3300032205	Hardwood Forest Soil	MALERIADEDVLGAIVELCGDGYCLVADVLPLFPGRFSHADRSRAVHRSVNRGLVIQRRGPDGREHVAVASEGWRLLRSRAA
Ga0326726_101635782	3300033433	Peat Soil	VAPEIDLFAPLPALPSAVMALKRITDEHVLSAIIDCAGDGYCPIADVLPSLPKLSHSDRRRAVRGSINRGLVLERRGPDGRVHVAVDSEGWRQLRAA
Ga0326730_10431021	3300033500	Peat Soil	TDEHVLSAIIDCAGDGYCPIADVLPSLPKLSHSDRRRAVRGSINRGLVLERRGPDGRVHVAVDSEGWRQLRAA
Ga0247829_101525492	3300033550	Soil	LKRITDEDVLGSIVELAGDGYCTVTELLPLLPKRTHADRRRAVHRSVNRGLVIQRRGPDGRQHVAIASEGWRLLRSRAA
Ga0247829_107059381	3300033550	Soil	MARRRITDEDVLGSIVELAGDGYCLVAELLPSLPRRAHVDRSRALRRSINRGLVLERRGPDGRA
Ga0247829_116369392	3300033550	Soil	LTAGLAATVSGMALRRITDEDVLASIVELAGDGYCLVAELLPSLPKRTHADRRRALNRSVNRGLVIERRGPDGRAYVAVASEGWRQLRAQVA
Ga0247830_115985052	3300033551	Soil	MARRRITDEDVLGSIVELAGDGYCLVAELLPSLPRRAHVDRSRALRRSINRGLVLERRGPDGRAYVAVASEGWRLLRARAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences