Metagenome / Metatranscriptome Family F050614

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050614
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	50 residues
Representative Sequence	VSSTSRQALGNLAGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSI
Number of Associated Samples	131
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.34 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.79 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.724 % of family members)
Environment Ontology (ENVO)	Unclassified (28.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.586 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.49% β-sheet: 0.00% Coil/Unstructured: 40.51%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF13458	Peripla_BP_6	38.62
PF07883	Cupin_2	3.45
PF12604	gp37_C	0.69
PF08546	ApbA_C	0.69
PF03301	Trp_dioxygenase	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.69
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.86 %
Unclassified	root	N/A	31.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.86 %
Unclassified	root	N/A	31.03 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.21 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	26.21 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.21 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.21 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.21 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	4.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.21 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3.45 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11275700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300000550\|F24TB_10012918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300000955\|JGI1027J12803_104394046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300000956\|JGI10216J12902_101510504	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300000956\|JGI10216J12902_110634997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	521	Open in IMG/M
3300000956\|JGI10216J12902_110865072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1821	Open in IMG/M
3300000956\|JGI10216J12902_124790666	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300001431\|F14TB_100173459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300002568\|C688J35102_120134461	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300002568\|C688J35102_120183863	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300002568\|C688J35102_120958290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3125	Open in IMG/M
3300003267\|soilL1_10082196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1150	Open in IMG/M
3300003321\|soilH1_10117274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2435	Open in IMG/M
3300004081\|Ga0063454_100903083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300005093\|Ga0062594_101718017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300005178\|Ga0066688_10435342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300005187\|Ga0066675_11204712	Not Available	562	Open in IMG/M
3300005329\|Ga0070683_102352663	Not Available	511	Open in IMG/M
3300005338\|Ga0068868_101283810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300005343\|Ga0070687_101165224	Not Available	567	Open in IMG/M
3300005343\|Ga0070687_101430325	Not Available	518	Open in IMG/M
3300005345\|Ga0070692_10141740	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005366\|Ga0070659_101621013	Not Available	578	Open in IMG/M
3300005435\|Ga0070714_100734965	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300005439\|Ga0070711_101593982	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005441\|Ga0070700_100594785	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005441\|Ga0070700_100896184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300005458\|Ga0070681_10863916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300005518\|Ga0070699_101477529	Not Available	623	Open in IMG/M
3300005535\|Ga0070684_100300586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300005539\|Ga0068853_101590834	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005544\|Ga0070686_101261621	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005546\|Ga0070696_101634971	Not Available	554	Open in IMG/M
3300005560\|Ga0066670_10826074	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005564\|Ga0070664_100768601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300005578\|Ga0068854_100412713	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300005615\|Ga0070702_101751002	Not Available	518	Open in IMG/M
3300005718\|Ga0068866_11005266	Not Available	593	Open in IMG/M
3300005888\|Ga0075289_1066136	Not Available	584	Open in IMG/M
3300006173\|Ga0070716_100130121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1590	Open in IMG/M
3300006175\|Ga0070712_100868779	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006581\|Ga0074048_13385693	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300006791\|Ga0066653_10158292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1111	Open in IMG/M
3300006804\|Ga0079221_10697836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300006845\|Ga0075421_101389627	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300006852\|Ga0075433_10462644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1118	Open in IMG/M
3300006854\|Ga0075425_100468518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300006871\|Ga0075434_102005994	Not Available	584	Open in IMG/M
3300009092\|Ga0105250_10162426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	933	Open in IMG/M
3300009148\|Ga0105243_10241727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1607	Open in IMG/M
3300009156\|Ga0111538_10420190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1694	Open in IMG/M
3300009162\|Ga0075423_10653779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300009162\|Ga0075423_12588461	Not Available	554	Open in IMG/M
3300009177\|Ga0105248_11563059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300009553\|Ga0105249_10340345	Not Available	1517	Open in IMG/M
3300009553\|Ga0105249_11758792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300009792\|Ga0126374_11868036	Not Available	504	Open in IMG/M
3300010047\|Ga0126382_10507387	Not Available	971	Open in IMG/M
3300010093\|Ga0127490_1109867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300010108\|Ga0127474_1076252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300010132\|Ga0127455_1172029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1093	Open in IMG/M
3300010147\|Ga0126319_1395080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	2142	Open in IMG/M
3300010154\|Ga0127503_10817617	Not Available	1209	Open in IMG/M
3300010335\|Ga0134063_10745520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300010362\|Ga0126377_10010866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	7104	Open in IMG/M
3300010371\|Ga0134125_12243196	Not Available	594	Open in IMG/M
3300010396\|Ga0134126_12704868	Not Available	538	Open in IMG/M
3300010398\|Ga0126383_11456493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300010400\|Ga0134122_11408344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300010896\|Ga0138111_1061346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300012385\|Ga0134023_1020199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300012387\|Ga0134030_1076125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300012389\|Ga0134040_1002661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1484	Open in IMG/M
3300012389\|Ga0134040_1310234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300012390\|Ga0134054_1162918	Not Available	589	Open in IMG/M
3300012392\|Ga0134043_1143763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300012401\|Ga0134055_1279854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525	Open in IMG/M
3300012406\|Ga0134053_1409167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300012409\|Ga0134045_1436770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300012469\|Ga0150984_101264368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300012495\|Ga0157323_1040548	Not Available	532	Open in IMG/M
3300012496\|Ga0157353_1046934	Not Available	514	Open in IMG/M
3300012903\|Ga0157289_10121303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300012948\|Ga0126375_10103671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1692	Open in IMG/M
3300012948\|Ga0126375_10766754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300012957\|Ga0164303_10255613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300012957\|Ga0164303_10697807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300012958\|Ga0164299_10158742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300012960\|Ga0164301_11624974	Not Available	537	Open in IMG/M
3300012961\|Ga0164302_10686531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300012976\|Ga0134076_10135226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300012988\|Ga0164306_10966431	Not Available	699	Open in IMG/M
3300013102\|Ga0157371_10122845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1846	Open in IMG/M
3300013102\|Ga0157371_11361578	Not Available	550	Open in IMG/M
3300013104\|Ga0157370_11323313	Not Available	649	Open in IMG/M
3300013296\|Ga0157374_11128119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300013308\|Ga0157375_10166409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2350	Open in IMG/M
3300014325\|Ga0163163_13033050	Not Available	524	Open in IMG/M
3300014497\|Ga0182008_10639730	Not Available	601	Open in IMG/M
3300014969\|Ga0157376_11431424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300015374\|Ga0132255_100561655	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300018431\|Ga0066655_11269212	Not Available	526	Open in IMG/M
3300018433\|Ga0066667_10160136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1602	Open in IMG/M
3300019255\|Ga0184643_1147857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1695	Open in IMG/M
3300021344\|Ga0193719_10472473	Not Available	507	Open in IMG/M
3300021445\|Ga0182009_10719126	Not Available	542	Open in IMG/M
3300021510\|Ga0222621_1014764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1522	Open in IMG/M
3300022694\|Ga0222623_10341684	Not Available	572	Open in IMG/M
3300022892\|Ga0247753_1001189	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300024187\|Ga0247672_1093544	Not Available	524	Open in IMG/M
3300025911\|Ga0207654_10123560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1629	Open in IMG/M
3300025916\|Ga0207663_11222904	Not Available	605	Open in IMG/M
3300025918\|Ga0207662_10073897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2069	Open in IMG/M
3300025924\|Ga0207694_10834429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300025928\|Ga0207700_11818869	Not Available	535	Open in IMG/M
3300025929\|Ga0207664_10192942	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300025936\|Ga0207670_10716776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300025945\|Ga0207679_12009812	Not Available	526	Open in IMG/M
3300025993\|Ga0208415_1018624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300026023\|Ga0207677_11198554	Not Available	695	Open in IMG/M
3300026025\|Ga0208778_1032398	Not Available	529	Open in IMG/M
3300026067\|Ga0207678_10287516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1412	Open in IMG/M
3300026075\|Ga0207708_11033688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300026088\|Ga0207641_12076129	Not Available	569	Open in IMG/M
3300026750\|Ga0207483_104199	Not Available	603	Open in IMG/M
3300027695\|Ga0209966_1049699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300027866\|Ga0209813_10307455	Not Available	617	Open in IMG/M
3300027991\|Ga0247683_1010881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300028145\|Ga0247663_1005350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1679	Open in IMG/M
3300028713\|Ga0307303_10071320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300028719\|Ga0307301_10004566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3860	Open in IMG/M
3300028744\|Ga0307318_10011330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2856	Open in IMG/M
3300028755\|Ga0307316_10120232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300028778\|Ga0307288_10168756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300028824\|Ga0307310_10403118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300028872\|Ga0307314_10308087	Not Available	506	Open in IMG/M
3300028875\|Ga0307289_10460298	Not Available	523	Open in IMG/M
3300031854\|Ga0310904_11203626	Not Available	546	Open in IMG/M
3300031858\|Ga0310892_11095049	Not Available	565	Open in IMG/M
3300031908\|Ga0310900_10751946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300031996\|Ga0308176_11085404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300032013\|Ga0310906_10169940	Not Available	1293	Open in IMG/M
3300032180\|Ga0307471_101771927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300032180\|Ga0307471_102237734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300033412\|Ga0310810_10252689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1938	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.48%
Host-Associated	Host-Associated	25.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.03%
Plants	Host-Associated → Plants	25.52%
Aquatic	Environmental → Aquatic	3.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.21%
Freshwater	Environmental → Aquatic → Freshwater	2.07%
Sediment	Environmental → Aquatic → Sediment	1.38%
Roots	Host-Associated → Plants → Roots	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.66%
Loam	Environmental → Terrestrial → Soil → Loam	19.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.07%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.07%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.07%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.07%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.07%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.07%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.38%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.69%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010093	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026750	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-B (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027991	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_112757002	3300000363	Soil	VTTAPRQRLVNLGGLVVALAVWTLYAVYLSPTHGWTFFFQLTVNGIILGSVYALIALG
F24TB_100129181	3300000550	Soil	VNSAVGQRLGNLTGLAVALVAFMLYAVYLSPSQGWTFFLQL
JGI1027J12803_1043940462	3300000955	Soil	VSSTRQVLGNLAGLGVLLAIWVVYAVYFSPAQGWTFFFQLTVNGIILGSIYA
JGI10216J12902_1015105042	3300000956	Soil	MSQNLRQQLANLTGLAVILAAWTIYAVYFSPTQGWTFYFQLTVNGIILGSVYALIALG
JGI10216J12902_1106349971	3300000956	Soil	VNAALSQQLRNLAGLGLGLVAFMFYAVYFSPTEGWVFFFQLTVNGIILGSVYALIALGYSMV
JGI10216J12902_1108650721	3300000956	Soil	VTTARRQRLGNLGGLAVVLAIWVVYAVYFSPTQGWTFFLQLTVNGIIL
JGI10216J12902_1247906661	3300000956	Soil	VNSAVGQRLGNLTGLAVALVAFMLYAVYLSPSQGWTFFLQLSVNGIILGSLYALIALG
F14TB_1001734592	3300001431	Soil	VDAALRQRLGNLAGLAVGLVAFMFYAVYFSPTQGWTFFFQLSVNGIILGSLYALIALGYT
C688J35102_1201344611	3300002568	Soil	VSSTSRQALGNLSGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSIYALIA
C688J35102_1201838632	3300002568	Soil	MELSFRRRLVNLGGLALVLGVWTIYAVHDKGWVFFFQLVVNGVTLGSVYALIALGY
C688J35102_1209582904	3300002568	Soil	VNQGLRQRLGNLGGLALALAVWTVYAVYFSPAQGWTFFFQLSVNGIILGSVYAL
soilL1_100821962	3300003267	Sugarcane Root And Bulk Soil	VDSALRQRLANLTGLAVALVAFMLYAVYLSPTHGWTFFFQLSVNGIILGSLYALI
soilH1_101172744	3300003321	Sugarcane Root And Bulk Soil	VSSTPRQVLGNLAGLGVLLVIWVIYAVYFSPTQGWTFFLQLTVGGIILGSIYALIAL
Ga0063454_1009030832	3300004081	Soil	VSSTSRQALGNLAGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSI
Ga0062594_1017180171	3300005093	Soil	VSPTSRQALGNLSGLGVLLAIWVVYAVYFSPAQGWTFFFQLT
Ga0066688_104353422	3300005178	Soil	VSSTPRQALGNLAGLGVLLAIWVFYAVYFSPTQGWTFFLQLTVDG
Ga0066675_112047121	3300005187	Soil	VSSTPRQALGNLAGLGVLLVIWVVYAVYFSPTQGWTFFLQL
Ga0070683_1023526632	3300005329	Corn Rhizosphere	VNPALSQQLRNLAGLGVGLVAFMFYAVYFSPTQGWVFFFQLTVNGIILGSIYALIALGYSMVY
Ga0068868_1012838102	3300005338	Miscanthus Rhizosphere	VASTSRQVLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFFQLTVN
Ga0070687_1011652242	3300005343	Switchgrass Rhizosphere	VNDDLRQRLGNLGGLGVALLVWTIYAVYFSPTQGWVFLFQLSVNGIILGSVYALIA
Ga0070687_1014303251	3300005343	Switchgrass Rhizosphere	VASTSRQVLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFFQLTVNGIILGSI
Ga0070692_101417401	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VNPEFRQRLVNLSGLAVALILWMFYAVYFSPTQGWTFYFQLTVNGIILGSVYALIALGYT
Ga0070659_1016210131	3300005366	Corn Rhizosphere	VASTSRQVLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFFQLTVNGIILGSIYALIA
Ga0070714_1007349652	3300005435	Agricultural Soil	VNPALSQQLRNLAGLGVGLVAFMLYAVYFSPTQGWVFFFQLTVNGIILGSIYALIALGY
Ga0070711_1015939821	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VNPEFRQRLVNLSGLAVALILWMFYAVYFSPTQGWTFFLQLTVNGIILGSVYALIALG
Ga0070700_1005947851	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VNSVRGQQLGNLGGLALALVAFMFYAVYLSPTQGWTFFFQLTVNGIILGS
Ga0070700_1008961842	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VNPEFRQRLVNLSGLAVALILWMFYAVYFSPTQGWTFFLQLTVNG
Ga0070681_108639162	3300005458	Corn Rhizosphere	VSPTSRQALGNLSGLGVLLAIWVVYAVYFSPAQGWTFFFQLTINGIIL
Ga0070699_1014775292	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSQNVRQQVVNLGGLGIILLAWTFYAVYLSPTQGWTFFFQLTVNGIILGSVYALIALGY
Ga0070684_1003005861	3300005535	Corn Rhizosphere	VNDDLRQRLGNLGGLAIALVAWTFYAVYFSPTHGWVFFFQLTVNGIIL
Ga0068853_1015908341	3300005539	Corn Rhizosphere	VNPEFRQRLVNLSGLAVALILWMFYAVYFSPTQGWTFFLQLTVNGIILGSVYALIAL
Ga0070686_1012616212	3300005544	Switchgrass Rhizosphere	VNPEFRQRLVNLSGLAVALILWMFYAVYFSPTQGWTFFLQLTVNGIILGSVYALIA
Ga0070696_1016349712	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VNPALSQQLRNLAGLGVGLVAFMFYAVYFSPTEGWVFFFQLTV
Ga0066670_108260742	3300005560	Soil	VGSTSRQALGNLGGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSIYALIAL
Ga0070664_1007686011	3300005564	Corn Rhizosphere	VLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFFQLTVNGIILGSIYA
Ga0068854_1004127132	3300005578	Corn Rhizosphere	MSQNVRQQVVNLGGLGIILLAWTFYAVYLSPTQGWTFFFQLTVNGIILGSVYALIALG
Ga0070702_1017510022	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VNASARQRLGNLGGLALALGLWTLYAVYLSPTQGWTFFLQLTVNGIILGSVYA
Ga0068866_110052661	3300005718	Miscanthus Rhizosphere	VLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFFQLTVNGIILGSIYALIALGYSL
Ga0075289_10661361	3300005888	Rice Paddy Soil	MTKNLRLQLANLAGLAAILAAWTIYAVYLSPTQGWTFYLQLTVNGIILGSVYALIALGYT
Ga0070716_1001301212	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VGSTSRQVLGNLAGLGVLLAIWVVYAVYFSPAQGWTFFFQLTVNGII
Ga0070712_1008687792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNPALSQQLRNLAGLGVGLLAFMLYAVYFSPTQGWVFFFQLTVNGIILGSIYALIALGY
Ga0074048_133856931	3300006581	Soil	VSLATRQQLTSLGGLALLLAVWTVYAVYFSPSTGWTFYFQLTVNGIILGSIYALIALGY
Ga0066653_101582922	3300006791	Soil	VSSTPRQALGNLAGLGVLLVIWVVYAVYFSPTQGWTFFLQLTVNGIILGSIYAL
Ga0079221_106978362	3300006804	Agricultural Soil	VNEDLRQRLGNLGGLAIALVAWTFYAVYFSPTHGWVFFFQL
Ga0075421_1013896272	3300006845	Populus Rhizosphere	VSSERLRTGVSLDLRQRLLNLGGLAVAIVAWTLYAVYLSPTHGWTFFLQLTVNGIILGSVYALIAL
Ga0075433_104626442	3300006852	Populus Rhizosphere	VASTSRQVLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFFQL
Ga0075425_1004685181	3300006854	Populus Rhizosphere	VNPEFRQRLANLSGLAVALILWMFYAVYFSPTQGWTF
Ga0075434_1020059941	3300006871	Populus Rhizosphere	MSQNLRQQLVNLSGLGIILICWTLYAVYLSPTQGWTFYLQLTVNGIILGSVYALI
Ga0105250_101624261	3300009092	Switchgrass Rhizosphere	VNDDLRQRLGNLGGLGVALLVWTIYAVYFSPTQGWVFFFQLSVNGIILGSVYALIA
Ga0105243_102417271	3300009148	Miscanthus Rhizosphere	VNAVLRQRLLNLGGLAVAIVAWTLYAVYLSPTQGWTFFLQLTVNGIILGSVYAL
Ga0111538_104201901	3300009156	Populus Rhizosphere	VNSTLGQRLGNLSGLALALVAFMFYAVYLSPTQGWTFFFQLTVNGIILGSLYAL
Ga0075423_106537792	3300009162	Populus Rhizosphere	VNSTLGQRLGNLSGLALALVAFMFYAVYLSPTQGWTFFFQLTVNGII
Ga0075423_125884611	3300009162	Populus Rhizosphere	VNSVRGQQLGNLGGLALALVAFMFYAVYLSPTQGWTFFFQLTV
Ga0105248_115630591	3300009177	Switchgrass Rhizosphere	MSSERLRTGVSDDLRQRLKNLGGLAVALIVWTFYAVYFSPTQGWTFFFQLTVNGIILGSVYALIALGYSMV
Ga0105249_103403452	3300009553	Switchgrass Rhizosphere	MSQNVRQQVVNLGGLGIILLAWTFYAVYLSPTQGWTFFFQ
Ga0105249_117587922	3300009553	Switchgrass Rhizosphere	VLGNLAGLCVLLAIWVVYAVYFSPAQGWTFFFQLTVNGIILGSI
Ga0126374_118680361	3300009792	Tropical Forest Soil	MSQNLRQQLVNLSGLGIILIAWTLYAVYLSPTQGWTFYFQLTINGIILGSVYALIALG
Ga0126382_105073872	3300010047	Tropical Forest Soil	VDSTLRQRLGNLTGLAVGLVAFMLYAVYLSPTQGWTFFFQLTVNGIILG
Ga0127490_11098672	3300010093	Grasslands Soil	VSSTSRQALGNLAGLGVLLAIWVVYAVYFSPAQGW
Ga0127474_10762522	3300010108	Grasslands Soil	VLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFLQLTV
Ga0127455_11720291	3300010132	Grasslands Soil	VGSTSRQALGNLGGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSIYALIALGYS
Ga0126319_13950803	3300010147	Soil	VSSATRQQLTNLWGLALLLAAWTVYAVYFSPTTGWTFFLQLTVNG
Ga0127503_108176171	3300010154	Soil	VSPATRQQLTSLWGLALLLAAWTIYAVYFSPTTGWTFYFQLTVNGIILGSIYA
Ga0134063_107455202	3300010335	Grasslands Soil	VIATRQRLGNFGGLGLALAAWVLYAVYFSPTEGWTFFLQLTVNGIILGSIYALIALGYSM
Ga0126377_100108661	3300010362	Tropical Forest Soil	VNPALGQRLGNLAGLGVALAAWTVYAVFFSPTQGWTFFFQLT
Ga0134125_122431961	3300010371	Terrestrial Soil	MSQNVRQQVVNLGGLGIILLAWTFYAVYLSPTQGWTFFFQLTVNG
Ga0134126_127048681	3300010396	Terrestrial Soil	VIATPKQRLGNLGGVGLALVAWALYAVYFSPTEGWVFFFQLTVNGII
Ga0126383_114564932	3300010398	Tropical Forest Soil	VNATLSQQLRNLAGLGLGLVAFMFYAVYFSPTHGWVFFFQLTVNGIILGSIYALI
Ga0134122_114083441	3300010400	Terrestrial Soil	VLGNLAGLGVLLAIWVVYAVYFSPTQGWTFFFQLTVNGI
Ga0138111_10613461	3300010896	Grasslands Soil	VIATRQRLGNFGGLGLALAAWVLYAVYFSPTEGWTFFLQLTVNGIILGSIYA
Ga0134023_10201992	3300012385	Grasslands Soil	VSSTPRQALGNLAGLGVLLVIWVVYAVYFSPTQGWTFFLQLTVNGII
Ga0134030_10761253	3300012387	Grasslands Soil	VSSTSRQALGNLAGLGVLLAIWVVYAVYFSPAQGWTFFLQLTVN
Ga0134040_10026611	3300012389	Grasslands Soil	VLGNLAGLGVLLAIWVFYAVYFSPTQGWTFFLQLTVGGIIL
Ga0134040_13102341	3300012389	Grasslands Soil	VIATRQQRLGNFAGLGLVLVAWVLYAVYASPTQGWTFFLQLT
Ga0134054_11629181	3300012390	Grasslands Soil	VGSTSRQALGNLGGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSI
Ga0134043_11437631	3300012392	Grasslands Soil	VGSTSRQALGNLGGLGVLLAIWVVYAVYFSPAQGWTFFLQLTVNGIIL
Ga0134055_12798542	3300012401	Grasslands Soil	VGSTSRQALGNLGGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSIYALIALGYSLV
Ga0134053_14091672	3300012406	Grasslands Soil	VSSTSRQALGNLGGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILSS
Ga0134045_14367702	3300012409	Grasslands Soil	VGSTSRQALGNLGGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILS
Ga0150984_1012643681	3300012469	Avena Fatua Rhizosphere	VSSTSRQALGNLAGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSIYALIA
Ga0157323_10405481	3300012495	Arabidopsis Rhizosphere	VNPALSQQLRNLAGLGVGLVAFMFYAVYFSPTQGWVFFFQLTVNGII
Ga0157353_10469341	3300012496	Unplanted Soil	VGSTSRQVLGNLAGLGVLLAIWVVYAVYFSPAQVWTFFFQLTVNGII
Ga0157289_101213031	3300012903	Soil	VDSALRQRLGNLTGLAVGLVAFMLYAVYLSPTQGWTFFLQLSVNGIILGSLYALIALGYTMVY
Ga0126375_101036713	3300012948	Tropical Forest Soil	VDSTLRQRLGNLTGLAVGLVAFMLYAVYLSPTQGWTFFFQL
Ga0126375_107667542	3300012948	Tropical Forest Soil	VDSTLKQRLGNLTGLAVGLVAFMLYAVYLSPTQGWTFFFQL
Ga0164303_102556132	3300012957	Soil	VASTSRQVLGNLAGLGVLLAIWVVYAVYFSPAQGWTFFFQLTVNGIIL
Ga0164303_106978072	3300012957	Soil	VNDDLRQRLGNLGGLAVALVAWTFYAVYFSPTEGWTFFLQLTVNG
Ga0164299_101587421	3300012958	Soil	VNDDLRQRLGNLGGLGVALLVWTIYAVYFSPTQGWVFFFQLSVNGI
Ga0164301_116249742	3300012960	Soil	VLGNLAGLGVLLAIWVVYAVYFSPAQGWTFFFQLTVNGIILDSIYALIA
Ga0164302_106865312	3300012961	Soil	VLGNLAGLGVLLAIWVVYAVYFSPAQGWTFFFQLTV
Ga0134076_101352262	3300012976	Grasslands Soil	VGSTSRQALGNLGGLGVLLAIWVVYAVYFSPTQGWTFFLQLTVNGIILGSIYALIALG
Ga0164306_109664312	3300012988	Soil	VTTARRQRLGNLGGLAVVLVVWVVYAVYFSPQQGWTFFRQLTVNGI
Ga0157371_101228451	3300013102	Corn Rhizosphere	VNEDLRQRLGNLGGLAIALVAWTFYAVYFSPTHGWVFFFQLTVNGIILGSVYALIALGYSMV
Ga0157371_113615782	3300013102	Corn Rhizosphere	VNAALSQQLRNLAGLGLGLVAFMFYAVYFSPTEGWVFFFQLTVNGIILG
Ga0157370_113233131	3300013104	Corn Rhizosphere	VSPTSRQALGNLSGLGVLLAIWVVYAVYFSPAQGWTFFFQLTINGIILGSIY
Ga0157374_111281191	3300013296	Miscanthus Rhizosphere	VNASARQRLGNLGGLVLALGLWTLYAVYLSPTQGWTFFFQLTVNGI
Ga0157375_101664093	3300013308	Miscanthus Rhizosphere	VNASARQRLGNLGGLALALGLWTLYAVYLSPTQGWTFFLQLTVSGI
Ga0163163_130330502	3300014325	Switchgrass Rhizosphere	MSQNLRQQLVNLTGLGIALLGWTLYAVYLSPTQGWTFYFQLTVNGI
Ga0182008_106397301	3300014497	Rhizosphere	VNASARQRLGNLGGLALALGLWTLYSVYLSPTQGWTFFL
Ga0157376_114314242	3300014969	Miscanthus Rhizosphere	VNPALSQQLRNLAGLGVGLVAFMFYAVYFSPTQGWVFFFQLTVN
Ga0132255_1005616551	3300015374	Arabidopsis Rhizosphere	VNPALSQQLRNLAGLGVGLVAFMLYAVYFSPTQGWVF
Ga0066655_112692121	3300018431	Grasslands Soil	VSSTPRQALGNLAGLGVLLAIWVVYAVYFSPTQGWTFFLQLT
Ga0066667_101601362	3300018433	Grasslands Soil	VIATRQRLGNFGGLGLALAAWVLYAVYFSPTEGWTFFLQLTVNGI
Ga0184643_11478573	3300019255	Groundwater Sediment	VSTTPRQALGNLAGLGVLLAAWVVYAVYFSPTQGWTFFLQLAVN
Ga0193719_104724731	3300021344	Soil	VNPEFRQRLGNLSGLGVALIAWMFYAVYFSPTQGWTFFFQLSVNGIILGSIYALIALGYSMVY
Ga0182009_107191261	3300021445	Soil	VSLTPRQALGNLAGLGVLLAIWVIYAVYFSPTQGWTFFLQLTVDGIILGSIYAL
Ga0222621_10147641	3300021510	Groundwater Sediment	VDAALRQRLGNLTGLAIALVAFMLYAVYLSPTQGWTFFFQLSVNGLILGSLYALIALGY
Ga0222623_103416841	3300022694	Groundwater Sediment	VNAASSQRLGNLAGLGLALVAWMFYAVYFSPTEGWVFFFQLTV
Ga0247753_10011894	3300022892	Soil	VNSTLGQRLGNLSGLALALVAFMFYAVYLSPTQGWTFFFQLTVNG
Ga0247672_10935442	3300024187	Soil	VTATSQQRLGNFAGFGVALLAWVFYAVYFSPTQGWTFFLQLTVNGIILGSI
Ga0207654_101235602	3300025911	Corn Rhizosphere	VNPALSQQLRNLAGLGVGLVAFMFYAVYFSPTQGWVFFF
Ga0207663_112229041	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VNPEFRQRLVNLSGLAVALILWMFYAVYFSPTQGWTFFLQLTVN
Ga0207662_100738973	3300025918	Switchgrass Rhizosphere	VNDDLRQRLGNLGGLGVALLVWTIYAVYFSPTQGWTFFFQLTVNGIILGSVY
Ga0207694_108344291	3300025924	Corn Rhizosphere	MSQNVRQQVVNLGGLGIILLAWTFYAVYLSPTQGWTFFFQLTVNGIILGS
Ga0207700_118188691	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSSERLRTGVSDDLRQRLKNLGGLAVALIVWTFYAVYFSPTQGWTFFFQLTVNGIILGS
Ga0207664_101929423	3300025929	Agricultural Soil	VNPALSQQLRNLAGLGVGLLAFMLYAVYFSPTQGWVFFFQLTVNGIILGSIYALIALGYS
Ga0207670_107167762	3300025936	Switchgrass Rhizosphere	VNDDLRQRLGNLGGLGVALLVWTIYAVYFSPTQGWVFFFQLSVNGIILGSVYALIALGYSMV
Ga0207679_120098121	3300025945	Corn Rhizosphere	VNASARQRLGNLGGLALALGLWTLYAVYLSPTQGWTFFLQLTVN
Ga0208415_10186241	3300025993	Rice Paddy Soil	VNEDLRQRLGNLGGLAIVLVAWMFYAVYFSPTQGWTFFLQLSV
Ga0207677_111985541	3300026023	Miscanthus Rhizosphere	VNPEFRQRLVNLSGLAVALILWMFYAVYFSPTQGWTFFLQLTVNGIILGSVYALIALGYS
Ga0208778_10323981	3300026025	Rice Paddy Soil	MTKNLRLQLANLAGLAAILAAWTIYAVYLSPTQGWTFYLQLTVNGII
Ga0207678_102875162	3300026067	Corn Rhizosphere	VNEDLRQRLGNLGGLAIALVAWTFYAVYFSPTHGWVFFFQLTVNGIILGSVYA
Ga0207708_110336881	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSQNVRQQVVNLGGLGIILLAWTFYAVYLSPTQGWTFF
Ga0207641_120761291	3300026088	Switchgrass Rhizosphere	VNASARQRLGNLGGLALALAAWTVYAVYFSPTQGWTFFLQLTVNGIILGSVYALIALGYS
Ga0207483_1041991	3300026750	Soil	VNSTLGQRLGNLSGLALALVAFMFYAVYLSPTQGWTFFFQL
Ga0209966_10496991	3300027695	Arabidopsis Thaliana Rhizosphere	VNSTLGQRLGNLSGLALALVAFMFYAVYLSPTQGWTFFFQLTVNGI
Ga0209813_103074551	3300027866	Populus Endosphere	VNSTLGQRLGNLSGLALALVAFMFYAVYLSPTQGWTFFFQLTVNGIILGSLY
Ga0247683_10108811	3300027991	Soil	VNAALSQQLRNLAGLGLGLVAFMFYAVYFSPTEGWVFFFQLTV
Ga0247663_10053501	3300028145	Soil	VNPALSQQLRNLAGLGVGLVAFMFYAVYFSPTQGWVFF
Ga0307303_100713201	3300028713	Soil	VTPALRQRLVNLGGLVVALAVWTLYAVYLSPTHGWTFFFQLS
Ga0307301_100045661	3300028719	Soil	VNAASSQRLGNLAGLALALVAWMFYAVYFSPTEGWVFFFQLTVNGIILGSVYALIALG
Ga0307318_100113304	3300028744	Soil	VNAASSQRLGNLAGLGLALVAWMFYAVYFSPTEGWVFFFQ
Ga0307316_101202322	3300028755	Soil	VSDDFRQRLGNLGGLAIALVAWMLYAVYFSPTQGWTFFLQLSVNGII
Ga0307288_101687561	3300028778	Soil	VNAASSQRLGNLAGLGLALVAWMFYAVYFSPTEGWVFFFQLTVNGIILGSVYA
Ga0307310_104031181	3300028824	Soil	VTPALRQRLVNLGGLVVALAVWTLYAVYLSPTHGWTFFFQLSVNGII
Ga0307314_103080872	3300028872	Soil	VNAASSQRLGNLAGLGLALVAWMFYAVYFSPTEGWVFLFQMT
Ga0307289_104602982	3300028875	Soil	VSSATRQQVTSLWGLALLLAAWTVYAVYFSPTTGWTFFLQLTVNGIILGSIYALIALGYSMV
Ga0310904_112036262	3300031854	Soil	VNPEFRQRLGNLSGLAVALILWMFYAVYFSPTQGWTFFFQLTVNGIILGSVYALIALGYS
Ga0310892_110950492	3300031858	Soil	VNPVLSQQLRNLAGLGLGLVAFMFYAVYFSPTQGWVFFFQLTVNGII
Ga0310900_107519461	3300031908	Soil	VNSVRGQQLGNLGGLALALVAFMFYAVYLSPTQGWTFFF
Ga0308176_110854041	3300031996	Soil	VDAALRQRLGNLTGLAVGLVAFMFYAVYFSPTQGWTFFFQLSVNGIIL
Ga0310906_101699402	3300032013	Soil	VNSVRGQQLGNLGGLALALVAFMFYAVYLSPTQGWTFFFQLTVNGIILGSLYAL
Ga0307471_1017719272	3300032180	Hardwood Forest Soil	VSSATRQQLTNLWGLALLLAAWTVYAVYFSPTTGWTFFLQLTVNGIILGSIYALIAL
Ga0307471_1022377341	3300032180	Hardwood Forest Soil	VSPTPRQALGNLAGLGVLLVIWVIYAVYFSPSQGL
Ga0310810_102526891	3300033412	Soil	VNSTLGQRLGNLSGLALALVAFMFYAVYLSPTQGWTFFFQLTVNGIILGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050614

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences