Metagenome / Metatranscriptome Family F050435

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050435
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	90 residues
Representative Sequence	MKLLTTFLIATLAALAVYSARRRIVFALKTGATVYVVLLFGRLLLSAGSLADRWEDLVWPVLIMLVAWAVLWVASTNYAQRRAKKSR
Number of Associated Samples	102
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.57 %
% of genes near scaffold ends (potentially truncated)	36.55 %
% of genes from short scaffolds (< 2000 bps)	86.90 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.931 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.828 % of family members)
Environment Ontology (ENVO)	Unclassified (28.276 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.345 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.70% β-sheet: 0.00% Coil/Unstructured: 31.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF05167	DUF711	35.86
PF08735	DUF1786	6.90
PF13180	PDZ_2	1.38
PF00491	Arginase	0.69
PF00903	Glyoxalase	0.69
PF02786	CPSase_L_D2	0.69
PF01862	PvlArgDC	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2848	Uncharacterized conserved protein, UPF0210 family	Cell cycle control, cell division, chromosome partitioning [D]	35.86
COG4012	Uncharacterized protein, DUF1786 family, actin-like ATPase superfamily	General function prediction only [R]	6.90
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.69
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.03 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	91.03 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	88.97 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	88.97 %
Unclassified	root	N/A	2.07 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004139\|Ga0058897_11025322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300005171\|Ga0066677_10381598	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005174\|Ga0066680_10205689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1245	Open in IMG/M
3300005176\|Ga0066679_10535252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300005176\|Ga0066679_10860613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300005177\|Ga0066690_10068660	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300005177\|Ga0066690_10264877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1155	Open in IMG/M
3300005179\|Ga0066684_10166014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1410	Open in IMG/M
3300005184\|Ga0066671_10649736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300005445\|Ga0070708_100465068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1193	Open in IMG/M
3300005445\|Ga0070708_101694610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300005454\|Ga0066687_10934574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300005459\|Ga0068867_102193170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300005467\|Ga0070706_100033995	All Organisms → cellular organisms → Bacteria	4706	Open in IMG/M
3300005467\|Ga0070706_100089528	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300005467\|Ga0070706_101295439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	668	Open in IMG/M
3300005467\|Ga0070706_101810973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300005468\|Ga0070707_101281258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300005468\|Ga0070707_101446425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300005471\|Ga0070698_100163155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2172	Open in IMG/M
3300005471\|Ga0070698_100837849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	864	Open in IMG/M
3300005532\|Ga0070739_10418068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300005536\|Ga0070697_100188024	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300005536\|Ga0070697_101565205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300005537\|Ga0070730_10001495	All Organisms → cellular organisms → Bacteria	22417	Open in IMG/M
3300005537\|Ga0070730_10254094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1160	Open in IMG/M
3300005537\|Ga0070730_10861220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300005542\|Ga0070732_10867639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300005552\|Ga0066701_10111598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1609	Open in IMG/M
3300005557\|Ga0066704_10910595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300005557\|Ga0066704_10924932	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005559\|Ga0066700_10697167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	697	Open in IMG/M
3300005559\|Ga0066700_10865601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300005561\|Ga0066699_10094313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1959	Open in IMG/M
3300005561\|Ga0066699_10679135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	736	Open in IMG/M
3300005575\|Ga0066702_10268805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300005576\|Ga0066708_10302384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1024	Open in IMG/M
3300005598\|Ga0066706_10996407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	646	Open in IMG/M
3300005598\|Ga0066706_11164582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300005764\|Ga0066903_100007910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9717	Open in IMG/M
3300005764\|Ga0066903_106676254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300006237\|Ga0097621_101980305	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006800\|Ga0066660_10113606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1944	Open in IMG/M
3300006800\|Ga0066660_11267448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300006903\|Ga0075426_10736886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300006903\|Ga0075426_10876832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300006903\|Ga0075426_11218644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300007076\|Ga0075435_101672813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300009012\|Ga0066710_103558206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300009088\|Ga0099830_11511270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300009089\|Ga0099828_10572492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1017	Open in IMG/M
3300009089\|Ga0099828_11617715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300009089\|Ga0099828_11890139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300009090\|Ga0099827_10082441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2515	Open in IMG/M
3300009090\|Ga0099827_10857892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300009090\|Ga0099827_11254749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300009094\|Ga0111539_10658558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1219	Open in IMG/M
3300009137\|Ga0066709_100637313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1524	Open in IMG/M
3300009147\|Ga0114129_10242288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2424	Open in IMG/M
3300009156\|Ga0111538_12106232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	709	Open in IMG/M
3300009162\|Ga0075423_12079017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300009177\|Ga0105248_11478144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	769	Open in IMG/M
3300009400\|Ga0116854_1071691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	824	Open in IMG/M
3300010037\|Ga0126304_11224077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300010041\|Ga0126312_11391659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300010152\|Ga0126318_10960299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300010166\|Ga0126306_10246452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1362	Open in IMG/M
3300010359\|Ga0126376_10605439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1037	Open in IMG/M
3300010360\|Ga0126372_11737894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	666	Open in IMG/M
3300010398\|Ga0126383_11555446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300010860\|Ga0126351_1274984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300011120\|Ga0150983_12053997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	964	Open in IMG/M
3300011269\|Ga0137392_10371411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1186	Open in IMG/M
3300011270\|Ga0137391_10054255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3422	Open in IMG/M
3300011270\|Ga0137391_10809146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	772	Open in IMG/M
3300011270\|Ga0137391_11205878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	604	Open in IMG/M
3300011270\|Ga0137391_11477319	Not Available	525	Open in IMG/M
3300012010\|Ga0120118_1045234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1121	Open in IMG/M
3300012096\|Ga0137389_10485039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1060	Open in IMG/M
3300012189\|Ga0137388_10618450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1007	Open in IMG/M
3300012201\|Ga0137365_10462377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	934	Open in IMG/M
3300012203\|Ga0137399_10344040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1238	Open in IMG/M
3300012203\|Ga0137399_10525250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	993	Open in IMG/M
3300012204\|Ga0137374_10136468	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300012207\|Ga0137381_11331867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	611	Open in IMG/M
3300012207\|Ga0137381_11564636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300012208\|Ga0137376_10725332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	857	Open in IMG/M
3300012209\|Ga0137379_10554424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1057	Open in IMG/M
3300012210\|Ga0137378_10705669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	920	Open in IMG/M
3300012210\|Ga0137378_11324045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300012211\|Ga0137377_11953598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300012212\|Ga0150985_106907668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	803	Open in IMG/M
3300012212\|Ga0150985_109414770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300012212\|Ga0150985_109600757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	796	Open in IMG/M
3300012212\|Ga0150985_116631840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300012212\|Ga0150985_117915344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	771	Open in IMG/M
3300012212\|Ga0150985_120522116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300012212\|Ga0150985_121018237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	695	Open in IMG/M
3300012357\|Ga0137384_10901201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300012358\|Ga0137368_10221258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1329	Open in IMG/M
3300012363\|Ga0137390_10474910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1225	Open in IMG/M
3300012363\|Ga0137390_10528837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1151	Open in IMG/M
3300012363\|Ga0137390_11602592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300012532\|Ga0137373_10520804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	906	Open in IMG/M
3300012918\|Ga0137396_10681970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300012918\|Ga0137396_11297199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300012927\|Ga0137416_12092736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300013772\|Ga0120158_10173498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1160	Open in IMG/M
3300014150\|Ga0134081_10267454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300015158\|Ga0167622_1066068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300015356\|Ga0134073_10086231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	906	Open in IMG/M
3300015371\|Ga0132258_10433563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3273	Open in IMG/M
3300018431\|Ga0066655_10302671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1041	Open in IMG/M
3300018433\|Ga0066667_10978770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
3300018468\|Ga0066662_10067626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2375	Open in IMG/M
3300021358\|Ga0213873_10249607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300021377\|Ga0213874_10044895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1336	Open in IMG/M
3300021384\|Ga0213876_10004733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7566	Open in IMG/M
3300021861\|Ga0213853_10924082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1668	Open in IMG/M
3300025910\|Ga0207684_10344603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1283	Open in IMG/M
3300025910\|Ga0207684_10498448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1044	Open in IMG/M
3300025910\|Ga0207684_10656614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	893	Open in IMG/M
3300025922\|Ga0207646_10680919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	920	Open in IMG/M
3300026089\|Ga0207648_11723910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300026309\|Ga0209055_1124384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	970	Open in IMG/M
3300026326\|Ga0209801_1010824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4735	Open in IMG/M
3300026527\|Ga0209059_1308345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300026529\|Ga0209806_1268816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300026542\|Ga0209805_1084188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1533	Open in IMG/M
3300026552\|Ga0209577_10079683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2696	Open in IMG/M
3300027681\|Ga0208991_1207398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300027842\|Ga0209580_10585819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300027857\|Ga0209166_10003197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11953	Open in IMG/M
3300027857\|Ga0209166_10561842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300027857\|Ga0209166_10629636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300027882\|Ga0209590_10700289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300028536\|Ga0137415_10844153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	726	Open in IMG/M
3300030596\|Ga0210278_1203512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300030829\|Ga0308203_1037819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	696	Open in IMG/M
3300031421\|Ga0308194_10289888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	563	Open in IMG/M
3300031520\|Ga0272428_1007405	All Organisms → cellular organisms → Bacteria	15888	Open in IMG/M
3300034268\|Ga0372943_0386997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	900	Open in IMG/M
3300034384\|Ga0372946_0112492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1282	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.45%
Host-Associated	Host-Associated	16.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.07%
Plants	Host-Associated → Plants	16.55%
Aquatic	Environmental → Aquatic	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.90%
Roots	Host-Associated → Plants → Roots	2.07%
Freshwater	Environmental → Aquatic → Freshwater	1.38%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.21%
Loam	Environmental → Terrestrial → Soil → Loam	15.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.38%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.07%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.21%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.07%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.07%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.38%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.38%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.69%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.69%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058897_110253221	3300004139	Forest Soil	MKLLTTLLIAVLAALAMYSARRRIVFALKTGAVVYVVLLFGRLAFSMGSLADRWEDLVWPVFILLAVWVALWWLGTFYAERRKSEAKVRTASGAERPRRRYL*
Ga0066677_103815982	3300005171	Soil	MKLLTTLLIAVLAALTVYAARRRIVFALKTGAVVYVVVLFGRLLFSMGDLADRWEDLVWPVLIMLVVWAVLWFISTNYAARRSARKSR*
Ga0066680_102056891	3300005174	Soil	VKLLTTLLIAALAALAVYSARRRIFFALKTGAVVYIVLLFGRLLLSAGSLADRWEDLIWPVFFLLLAWVILWRVSTTYAERRARKSQNRI*
Ga0066679_105352521	3300005176	Soil	MAALVALGVYVARRRILYALKTGAIAYVVLLFARLLISAGSMADRWEDLIGPMLLLLVAWIVLWYVSTAYAHRRDRAKRISRASGAGRPAR*
Ga0066679_108606131	3300005176	Soil	VKLLSTLLLASLAALAVYSARRRIVYALKTGAVVYIVLLFGRLLLSAGSLGERWEDLIWPVFFILVGWVILWRVSTTYAERR
Ga0066690_100686604	3300005177	Soil	VKLLSTLLLAMLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFMLVGWAVLWWVSTTYAERRGKRARSASEAGRRGHRFR*
Ga0066690_102648771	3300005177	Soil	VKLLTTLLMASLVALGVYVARRRILYALKTGAIAYVVLLFARLLISAGSMADRWEDLIVPMVLLLVAWVVLWYVSTAYAHRRDRAKRISRASGAGRPAR*
Ga0066684_101660141	3300005179	Soil	PMKLLSTLLIASLAALVVYAARRRIVFALKTGAIVYVVVMFGRLLLSMDRWEDLVWPVVIMLIAWAVLWVASTNYAERRARKSR*
Ga0066671_106497362	3300005184	Soil	MKLLSTLLIASLAALVVYAARRRILFALKTGAIVYVVVMFGRLLLSMDRWEDLVWPVVIMLIAWAVLWVASTNYAERRARKSR*
Ga0070708_1004650682	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTTVLIACMAALVVYAARRRIMFALKTGAVVYVVVLFGRLVLSAGSLADRWEDLVWPVLIMLIAWAVLWVA
Ga0070708_1016946102	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTEVLIAFGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLAGPVVIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0066687_109345741	3300005454	Soil	WRVKLLTTLLMAALVALGVYVARRRILYALKTGAIAYVVLLFARLLISAGSMADRWEDLIVPLLLLLVAWVVLWYVSTAYAHRRDRAKRISRASGAGRPAR*
Ga0068867_1021931702	3300005459	Miscanthus Rhizosphere	MKLLTTLLIACLAALAVYSARRRILFALKTGAVVYIVVLFGRLILSAGSLGDRWEDLLWPVVIMLIAWAVLWVVSSTYADRRAK
Ga0070706_1000339956	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTEVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLAGPVVIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0070706_1000895281	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTEVLIAFGVALAVYAARRRIIFALKAGAVVYVVLMFGRLLLSMDRWEDLAGPVVLMLVAWAVLWVVSTNYAERRAKKSR*
Ga0070706_1012954392	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKLFTTLLLAMLGALAVYAARRRIMYALRVGAILYVVLLFGRLLVSGLSMADRWEDLIVPVFLLLLAWLALWFFSTAYAERREKQKRLRSASGAGRP
Ga0070706_1018109731	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTTVLISFGVALAVYAARRRIVFALKTGAVAYVVLMVGRLLLSMDRWEDLMWPVLIMLIAWAVLWVASTNYAERRAKKSR*
Ga0070707_1012812581	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YAARRRIMYALRVGAILYVVLLFGRLLVSGLSMADRWEDLIVPVFLLLLAWLALWFFSTAYAERREKQKRLRSASGAGRPAR*
Ga0070707_1014464251	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTTVLIAFGVALAVYAARRRIMFALKTGAAVYVVLLFGRLLLSMDRWEDLVWPVLIMLVAWAVLWVASTSYADRRAKKSR*
Ga0070698_1001631553	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LISFGVALAVYAARRRIVFALKTGAVAYVVLMVGRLLLSMDRWEDLMWPVLIMLIAWAVLWVASTNYAERRAKKSR*
Ga0070698_1008378492	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VKLLTTLLIACTAALAVYSIRRRILFALRTGAIVYVVVLFGRLLLSAGSLADRWEDLVWPVFVMLVAWVILWFASTAYAERRASQRKGRYRI*
Ga0070739_104180682	3300005532	Surface Soil	LTTLLFALVAALGVYAARRRILFAVKTGAVVYVVVLFGRLLLSAGSLADRWEDFVWPAIGLGVVWLVLWRVSTIYAERHASRRR*
Ga0070697_1001880243	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTEVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLAGPVVIMLVAWAVLWVVSTNYAERRAKKS
Ga0070697_1015652052	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KLLTTLLIACTAALAVYSIRRRILFALRTGAIVYVVVLFGRLLLSAGSLADRWEYLVWPVFVMLVAWVILWFASTAYAERRASQRKGRYRI*
Ga0070730_100014958	3300005537	Surface Soil	VKLLTTLLIAVLAALAVYSARRRILFALKTGAVVYIVLLFGRLILSAGSLADRWEDILWPVLIMLVAWVSLWWTSTVYAERRGRRTKVPAPAKTASGVGRPGR*
Ga0070730_102540942	3300005537	Surface Soil	MKLLTTFLIATLAALAVYSARRRIVFALKTGATVYVVLLFGRLLLSAGSLADRWEDLVWPVLIMLVAWAVLWVASTNYAQRRAKKSR*
Ga0070730_108612202	3300005537	Surface Soil	MKLLSTVLIACFAALVVYAARRRIVFALKTGAVVYVVVMFGRLLLSMDRWEDLIWPVLIMLIAWAVLYVASTNYAERRAKKTR*
Ga0070732_108676392	3300005542	Surface Soil	MTKFVTTLLFAMLAALGVYMARRRILFALKTGAIVYVVLLFGRLLLSLGSIADRFDELLWPALFLFLAWTILWWVSIVYAERRDRLRARESRIRRASGAGRGAR*
Ga0066701_101115982	3300005552	Soil	VKLFTTFLIASLAAMMVYAARRRILFALRTGAIVYVVLLFGRLLLSAGSLADRWEDLLWLVVGMLIIWVVLWWISTVYAERRAARRGR*
Ga0066704_109105952	3300005557	Soil	MKLLTTVLIACGVALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVIIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0066704_109249322	3300005557	Soil	VKLLTTLLLAMLAALGVYLARRRLIFALKTGAIVYIVLLFARLLISAGSFADRWEDLIGPVIFLLIAWVILWWISTAYAQRRDREKRLRRASGAGRPAR*
Ga0066700_106971672	3300005559	Soil	VKLLTTLLMASLVALGVYVARRRILYALKTGAIAYVVLLFARLLISAGSMADRWEDLIVPMVLLLVAWVVLWYVSTAYAHR
Ga0066700_108656012	3300005559	Soil	PARRQRGRDGCPGPRPMKLLTTVLIACGVALAVYAARRRIIFALKSGAVVYVVLMFGRLLLSMDRWEDLVGPVIIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0066699_100943132	3300005561	Soil	VKLLSTLLLAMLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFLLVGWAVLWWVSTTYAERRGKRARSASEAGRRGHRFR*
Ga0066699_106791352	3300005561	Soil	VKLLTTLLIAALAALAVYSARRRIFFALKTGAVVYIVLLFGRLLLSAGSLADRWEDLIWPVFFLLLAWVILWRVSTTYAERRARK
Ga0066702_102688052	3300005575	Soil	ARPVKLLSTLLLAMLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFILVAWAVLWRVSTMYAERRDKSLRSASEAGRRGRRFR*
Ga0066708_103023841	3300005576	Soil	GAWSMKVFSTLLIAALAALAVYSARHRIIFALKTGAVVYVVVLFGRLLLSAGSLADRWEDLFWPVLIMLTAWAVLWVISTSYADRRAKKTRYRV*
Ga0066706_109964072	3300005598	Soil	LLTTVLIACGVALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVIIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0066706_111645821	3300005598	Soil	MLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLIWPVFFLLVGWAVLWWVSTTYAERRGKRARSASEAGRRGHRFR*
Ga0066903_10000791011	3300005764	Tropical Forest Soil	VKLLSTLLLATLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSMGERWEDLVWPVFFILVGWTILWRVSTTYEERRSKSIRSASEAGRRGRRFR*
Ga0066903_1066762542	3300005764	Tropical Forest Soil	MKLLTTLLFAALAALGVYAARRRILFALKTGAIVYVVLLFARLLLSAGSLADRWEDLVWPVFFLLIAWAALWWISTTYAERRDRERKLRRASGARRAVR*
Ga0097621_1019803052	3300006237	Miscanthus Rhizosphere	MKFLTTLLLALLVALGVYTARRRIMLSLRVGAIAYVVLLFGRLALSANSFADRWEDLIWPVFILLVVWAVLWLVST
Ga0066660_101136063	3300006800	Soil	VKLLSTLLLAMLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFLLVGWAVLWWASTTYAERRGKRARSASEAGRRGHRFR*
Ga0066660_112674481	3300006800	Soil	VKLLTTLLMAALVALGVYVARRRILYALKTGAIAYVVLLFARLLISAGSMADRWEDLIVPMVLLLVAWVVLWYVSTAYAHRRDRAKRISRASGAGRPAR*
Ga0075426_107368862	3300006903	Populus Rhizosphere	VKLLTTLLIASLAALAVYSARRRIIFALKTGAIVYIVLLFGRLLISAGSLADRWEDLIWPVFFLLLAWVILWRVSTTYAERRARKPQNRI*
Ga0075426_108768321	3300006903	Populus Rhizosphere	VKLLTTLLIAMLATLAVYSARRRIFFALKTGAVVYVVVLFVRLVFDFGNLADRWEDLVWPVFIMLVAWAILWFASTTYAERRAGRKRASASGAVRRVR*
Ga0075426_112186441	3300006903	Populus Rhizosphere	VKLLTTFLIASLAALIVYAARRRIIFALKTGAIVYVVVLFGRLLFSAGSLADRWEDLVWLFLVLLLVWLVLWFVSTTYQARRPRKTR*
Ga0075435_1016728132	3300007076	Populus Rhizosphere	GGPRLAVKFLTTLLLALLVALGVYSARRRIMLSLKVGAIAYVVLLFGRLALSANSFADRWEDLIWPVFILLVVWVVLWLVSTQYEQRKAARRGR*
Ga0066710_1035582062	3300009012	Grasslands Soil	LLTTVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVIIMLVAWAVLWVVSTNYAERRAKKSR
Ga0099830_115112701	3300009088	Vadose Zone Soil	MKLLTTVLIACMAALVVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLLMLIAWAVLWVA
Ga0099828_105724921	3300009089	Vadose Zone Soil	VLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLIACAVLWVASTNYAERRAKKSR*
Ga0099828_116177152	3300009089	Vadose Zone Soil	MKLLSTVLIACMAALVVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVAIMLIAWAVLWVASTNYAERRAKKSR*
Ga0099828_118901392	3300009089	Vadose Zone Soil	MKLLTTVLIACAAALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLVAWAVLWVASTNYAERRAKKSR*
Ga0099827_100824412	3300009090	Vadose Zone Soil	VKLLSTLLLASLAALAVYSARRRIVYALKTGAVVYIVLLFGRLLLSAGSLGERWEDLIWPVFFILVGWVILWRVSTTYAERRSKTIRSASEAGRRARRFR*
Ga0099827_108578922	3300009090	Vadose Zone Soil	MKLLTTVLIACAAALAVYAARRRIMFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLVLWAVLWVASTNYADRRAKKSR*
Ga0099827_112547492	3300009090	Vadose Zone Soil	MKLLTEVLIACGVALAVYAARRRIMFALKTGALVYVVLMFGRLLLSMDRWEDLAVPVVIMLIAWAVLWVVSTNYAERRAKKSR*
Ga0111539_106585581	3300009094	Populus Rhizosphere	VKFLTTLLLALLVALGVYSARRRIMLSLKVGAIAYVVLLFGRLALSANSFADRWEDLIWPVFILLVVWVVLWLVSTQYEQRKAARRGR*
Ga0066709_1006373132	3300009137	Grasslands Soil	MKLLTTVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVIIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0114129_102422883	3300009147	Populus Rhizosphere	VKLLTTLLLAVLVALAVYSARRRLWLALRAGAIAYVVLLFGRLFLSANSFADRWEDLVWPVFILLLAWVVLWVVSTTYEQRKASRKNG*
Ga0111538_121062321	3300009156	Populus Rhizosphere	ALLVALGVYSARRRIMLSLKVGAIAYVVLLFGRLALSANSFADRWEDLIWPVFILLVVWVVLWLVSTQYEQRKAARRGR*
Ga0075423_120790171	3300009162	Populus Rhizosphere	LVALGVYSARRRIMLSLKVGAIAYVVLLFGRLALSANSFADRWEDLIWPVFILLVVWVVLWLVSTQYEQRKAARRGR*
Ga0105248_114781442	3300009177	Switchgrass Rhizosphere	MKFLTTLLLALLVALGVYTARRRIMLSLRVGAIAYVVLLFGRLALSANSFADRWEDLIWPVFILLVVWAVLWLVSTTYEQRKSARRGR*
Ga0116854_10716911	3300009400	Soil	RMKLLTTLLVACLAALGVYAARRRIVFALKTGALVYVVVLFGRLILSAGSLADRWEDLVWPVFIMLLAWLIVWWITTSYAERHPRKG*
Ga0126304_112240772	3300010037	Serpentine Soil	MKLLTTLLIAVLAALMVYTIRRRVWFALKVGAVVYMVALFARLLLSSFSWSDRLEDMVWPVLGVLVVWVVLWFVSTTYERRKAARASAAKRP*
Ga0126312_113916591	3300010041	Serpentine Soil	VKLLTTLLIACLAGLVVYAARRRIMFALKTGAIVYIVVLFARLVLSAGSLADRWEDLVWPAFFMLLAWVVLWWASTTYEQRRTRRPR*
Ga0126318_109602992	3300010152	Soil	ATLAALTVYAARRRILFALRTGAIVYIIVLFARLLFSAFSLSDRWEDVLWPIVGMALIWAIAWCASNVYLERRARRGR*
Ga0126306_102464522	3300010166	Serpentine Soil	MKLLTTLLIAALAALMVYSIRRRVWLALRVGAVVYLVVLFGRLLLSSFSWADRLEDMVWPVLLVLVAWIVLWFVSTAYERRKAARQGR*
Ga0126376_106054392	3300010359	Tropical Forest Soil	MKLLTTLLIAVLAALGVYSARRRIFFALKTGAIVYVVVLFVRLALDMGSLADRWDQVIWPIFIMLAAWVVLWFATTLYQQRRETRKGSTSASGAARRAR*
Ga0126372_117378942	3300010360	Tropical Forest Soil	MKLLTTLLIAVLAALGVYSARRRIFFALKTGAIVYVVVLFVRLALDMGSLADRWDQVIWPIFIMLAAWVVLWLASTAYQQRRAARTGSRSPADKSRFSP
Ga0126383_115554461	3300010398	Tropical Forest Soil	RSLITIAVLAALGVYSARRRIFFALKTGAIVYVVVLFVRLALDMGSLADRWDQVIWPIFIMLAAWVVLWFATTLYQQRRDARKGSTSAPGAARRAR*
Ga0126351_12749842	3300010860	Boreal Forest Soil	VKLLTTLLIACLAALAVYSARRRIVFALKTGAVVYIVLLFARLIVSAGSFADRWEDVLWPVLIMLVAWVTLWWISTVYAERRGRKSSAPVKTASGVGRPGR*
Ga0150983_120539972	3300011120	Forest Soil	GHPGARPMKLLTTLLVSVLAALAVYSARRRIVFALKTGAVVYVVLLFGRLLISAGSLADRWEDLFWPIVVMLIAWVILWSASNVYAERREKKLPAKTASGAGRPGR*
Ga0137392_103714112	3300011269	Vadose Zone Soil	MKLLTEVLIACAIALAVYAARRRIVFALKTGAVAYVVLMVGRLLLSMDRWEDLMWPVLIMLIAWAVLWVASTNYAERRAKKSR*
Ga0137391_100542551	3300011270	Vadose Zone Soil	MKLLTEVLIACAVALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVVIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0137391_108091462	3300011270	Vadose Zone Soil	MKLLTTVLIACAAALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLVAWAVLWVASTNYAERRAQKSR*
Ga0137391_112058782	3300011270	Vadose Zone Soil	MKLLTTVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLIAWAVLWVASTNYAERRAKKSR*
Ga0137391_114773191	3300011270	Vadose Zone Soil	MKLLTTVLIACMAALVVYAARRRIMFALKTGALVYVVLMFGRLVLSLDRWEDLAWPVAIMLIAWAVLWVASTNYAERRAKKSR*
Ga0120118_10452342	3300012010	Permafrost	MKLLTTLLISCLAALAVYSARRRIMFALKTGAVVYVVLLFGRLLISAGSLADRWEDVLWPVLVMLIAWVILWWISSVYTERRGRKVPAKTASGVGRPGR*
Ga0137389_104850393	3300012096	Vadose Zone Soil	AVYAARRRIMFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLVLWAVLWVASTNYADRRAKKSR*
Ga0137388_106184502	3300012189	Vadose Zone Soil	MKLLTTVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLLAWAVLWVASTNYAERRAKKSR*
Ga0137365_104623772	3300012201	Vadose Zone Soil	MKLLTTLLLAALAAFGVYAARRRILFALKAGAVVYVVLLVGRLLLSAFSLADRWEDLVLPGTFLLLAWVILWWVSTTYAERRDQQKKLRRAARAERPAR*
Ga0137399_103440402	3300012203	Vadose Zone Soil	MKLLTTVLIACGVALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSLDRWEDLVWPVLIMLIAWAVLWVASTNYAERRGKKTR*
Ga0137399_105252502	3300012203	Vadose Zone Soil	MKLLTEVLIACAVALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVVIMLVAWAVLWVVS
Ga0137374_101364683	3300012204	Vadose Zone Soil	MKLLTTLLLAILVALGVYSARRRLLLALRVGAIAYVVLLFGRLFLSANSFADRWEDLIWPVFILLVAWAVLWAVSTT
Ga0137381_113318671	3300012207	Vadose Zone Soil	MKLLTTVLIACGVALAVYAARRRIMFALKTGALVYVVLMFGRLLLSMDRWEDLVGPVIIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0137381_115646362	3300012207	Vadose Zone Soil	MKLLTTLLIACLAALAVYSARRRILFALKTGAAVYVVLLFGRLLVSAGSLADRWEDIFWPVALMLVAWVILWRISTVYVGRRGRKVPVKTASGAGRPGR*
Ga0137376_107253321	3300012208	Vadose Zone Soil	MKLLTEVLIACGVALAVYAARRRIMFALKTGALVYVVLMFGRLLLSMDRWEDLAVPVVIMLIAWAVLWVVSTNYAER
Ga0137379_105544242	3300012209	Vadose Zone Soil	MKLLTEVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVIIMLVAWAVLWVVSTNYAERRAKKSR*
Ga0137378_107056692	3300012210	Vadose Zone Soil	MKLLTTLLIACLAALAVYAARRRIIFALKTGAAVYVVVLFGRLILSAGSLADRWEDLVWPVFILLAVWVALWWLGTSYAERRKSEAKVRTASGAERPRRRYL*
Ga0137378_113240452	3300012210	Vadose Zone Soil	KLLTTLLLAALAAFGVYAARRRILFALKAGAVVYVVLLVGRLLLSAFSLADRWEDLVLPGTFLLLAWVILWWVSTTYAERRDQQKKLRRAARAERPAR*
Ga0137377_119535981	3300012211	Vadose Zone Soil	MKLLTTLLLAALVALGVYIARRRILYALRVGAIAYVVLLFGRLLISMGSMADRWEDLVWPVLSLVLAWVILWWVSTSYAQ
Ga0150985_1069076682	3300012212	Avena Fatua Rhizosphere	VKLLTTLLIAMLAALAVYAARRRIVFALKTGAVVYIVVLFARLALDMRGVADRLDDFIWPVCILVVIWVILWKISTMYAERRAARKASSASGAARRAR*
Ga0150985_1094147702	3300012212	Avena Fatua Rhizosphere	TALIAALAALAVYVARRRIVFALKTGAIVYVVVLFLRLAVSAGSLADRWEDLVWPVFILLVVWAVLWFASTAYESRRARRKRYRI*
Ga0150985_1096007572	3300012212	Avena Fatua Rhizosphere	MKLLTTLMIAVLASLAVYAARRRIFFALKTGAVVYIVVLFVRLVLDMGSLADRWDELVWPVCVMLAAWLVLWFASRVYEQRRAGRKPPNATEAVRRVR*
Ga0150985_1159361053	3300012212	Avena Fatua Rhizosphere	AVYSARRRIMFALKTGAVVYVVALFARLALDMRGVTDRLDEFVWPLCILLVVWVILSWVSTAYAERRAARRASNASGAARRAR*
Ga0150985_1166318402	3300012212	Avena Fatua Rhizosphere	ERHPGAGSGMKLLTTLLIAVLAALAVYSARRRIMFALKTGAVVYIVVLFARLALDMGSLADRWEDLVWPVFITLIAWVILWLVSTAYAERRAARKTRF*
Ga0150985_1179153442	3300012212	Avena Fatua Rhizosphere	MKILTTLLLALLVALGVYVARRRIMLALKVGAIAYVVLLFGRLALSANSFADRWEDLVWPVFILLVVWAVLSLVSTAYEQRKAARRGR*
Ga0150985_1205221162	3300012212	Avena Fatua Rhizosphere	VKLLTTALIAALAALAVYVARRRIVFALKTGAIVYVVVLFFRLAVSAGSLADRWEDLVWPVFILLVVWAVLWFASTAYESRRARRKRYRI*
Ga0150985_1210182371	3300012212	Avena Fatua Rhizosphere	HVKLLTTLLVAMLAALAVYSARRRIKFALKTGAIVYVVLLFARLGLDMRGVADRLDDFVWPICILLVVWVILWWASTTYAERRAARKAASASGAARRAR*
Ga0137384_109012011	3300012357	Vadose Zone Soil	MKLLTTLLIACLAALAVYSARRRILFALKTGAVVYIVLLFGRLLISAGSLADRWEDIFWPVALMLVAWVILWRISTVYVGRRGRKVPVKTASGAGRPGR*
Ga0137368_102212582	3300012358	Vadose Zone Soil	MKLLTTLLLAILVALGVYSARRRLLLALRVGAIAYVVLLFGRLFLSANSFADRWEDLIWPVFILLVAWAVLWAVSTTYEQRKASRKRRLTP*
Ga0137390_104749101	3300012363	Vadose Zone Soil	VKLFTTLLLAMLGALAVYAARRRILFALRVGAILYVVLLFGRLLVSGLSMADRWEDLIVPVFLLLLAWLVLWFVSTAYAERRDKQQRLRRASGA
Ga0137390_105288372	3300012363	Vadose Zone Soil	VKLFTTLLLAMLAALGVYLARRRVIFALKTGAIAYIVLLFGRLLISAGSFADRWEDLILPVIFLLIGWVILWWISTTYAQRRDREKRLRRASGAGRPAR*
Ga0137390_116025921	3300012363	Vadose Zone Soil	VKLLSTLLLASLAALAVYSARRRIVYALKTGAVVYIVLLFGRLLLSAGSLGERWEDLIWPVFFILVGWVILWRVSTTYAERRSKTIRSASEAGRRVRRFR*
Ga0137373_105208042	3300012532	Vadose Zone Soil	VKLLTTLLIAALATLAVYAARRRILFALKTGAVVYVTVLFARLLFSAGSLADRWEDLVWPVLIMLVAWVILWFVSTAYAERRAGRKGRYRI*
Ga0137396_106819702	3300012918	Vadose Zone Soil	VKLLTTLLIAGIAGLAGYMARRRIVLALRTGAVVYVVVLFGRLVLSAGSLADRWEDLVWPVLIMLIAWAVLWVASTNYAERRAKKSR*
Ga0137396_112971992	3300012918	Vadose Zone Soil	MKLLTTLLIACLAALAVYAARRRIWYSLRVGAIVYVVVLFGRLVLSAGSLADRWEDFVWPLFAALVVWGVLWVVSTTYAQRKAARRGR*
Ga0137416_120927362	3300012927	Vadose Zone Soil	MKLLTTVLIACGVALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSLDRWEDLVWPVLIMLIAWAVLWVASTNYAERRAKKSR*
Ga0120158_101734981	3300013772	Permafrost	LLTTLLIAVLAALAVYSARRRIVFALKTGAVVYIVLLFARLVISAGSFADRWEDILWPVLIMLVAWVILWWISTAYVERRDRKSPAPIKTASGVGRPGR*
Ga0134081_102674541	3300014150	Grasslands Soil	VKLLSTLLLAMLAALAVYSACRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFILVAWAILWRVSTMYAERRDKSLRSASEAGRRG
Ga0167622_10660682	3300015158	Glacier Forefield Soil	VKLLTTLLIACLAALAVYSARRRIVFALKTGAVVYVGLLFARLLISAGSLADRWEDILWPVVLMLIAWVVLWAVSTAYAERRGRKVAVKTASGAGRPGR*
Ga0134073_100862311	3300015356	Grasslands Soil	VKLLSTLLLACLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFMLVAWAVLWWVSTTYAARRDKSLRSAYEAGRRGRRFR*
Ga0132258_104335632	3300015371	Arabidopsis Rhizosphere	MKFLTTLLLAVLVGLAVYSARRRLILALRVGGIAYVVLLFGRLLLSANSFADRWEDLVWWVLILLVAWAVLWLVSTTYEQRKARRGR*
Ga0066655_103026711	3300018431	Grasslands Soil	RPMKLLTTLLLAAVVAFGVYAARRRILFALKAGAVVYVVLLLGRLLVSAFSLTDRWEDLVLPAIFLLLAWVILWWVSTSYAERRDQQKKLRRAARAERPAR
Ga0066667_109787701	3300018433	Grasslands Soil	MKLLTEVLIACGVALAVYAARRRIMFALKTGALVYVVLMFGRLLLSMDRWEDLAVPVVIMLIAWAVLWVVSTNYAERRAKKSR
Ga0066662_100676263	3300018468	Grasslands Soil	VKLLSTLLLACLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFILVAWAVLWRVSTMYAERRDKSLRSASEAGRRGRRFR
Ga0213873_102496071	3300021358	Rhizosphere	MKLLTTFLIASLAALAIYAARRRIFFALRTGAIVYIVVLFARLLLSAGSLADRWEDVIWLLFAMLVLWAVAWFVSNLLLERRARRGR
Ga0213874_100448952	3300021377	Plant Roots	VKLLTTFLIASLAALAIYAARRRIFFALRAGAIVYVVVLFARLLLSAGSLGDRWEDVIWLLFGMLVLWVVAWFVSNLLLERRARRGR
Ga0213876_100047332	3300021384	Plant Roots	MKLLTTFLIASLAALAIYAARRRIVFALRTGAMVYIVVLFARLLLSAGSLADRWEDVIWLLFAMLVLWAVAWFVSNLLLERRARRGR
Ga0213853_109240822	3300021861	Watersheds	MKLLTTLLIAVLAALAMYSARRRIVFALKTGAVVYVVLLFGRLALSMGSLADRWEDLFWPIVVMLIAWVILWSASLVYAERRNDGKIPAKSASGVGRPGR
Ga0207684_103446032	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTEVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLAGPVVIMLVAWAVLWVVSTNYAERRAKKSR
Ga0207684_104984482	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKLFTTLLLAMLGALAVYAARRRIMYALRVGAILYVVLLFGRLLVSGLSMADRWEDLIVPVFLLLLAWLALWFFSTAYAERREKQKRLRSASGAGRPAR
Ga0207684_106566142	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTTVLISFGVALAVYAARRRIVFALKTGAVAYVVLMVGRLLLSMDRWEDLMWPVLIMLIAWAVLWVASTNYAERRAKKSR
Ga0207646_106809192	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLTEVLIACGVALAVYAARRRIIFALKTGAVVYVVLMFGRLLLSMDRWEDLAGPVVIMLVAWAVLWVVSTN
Ga0207648_117239102	3300026089	Miscanthus Rhizosphere	MKLLTTLLIACLAALAVYSARRRILFALKTGAVVYIVVLFGRLILSAGSLGDRWEDLLWPVVIMLIAWAVLWVVSSTYADRRAKK
Ga0209055_11243841	3300026309	Soil	ARRRIFFALKTGAVVYIVLLFGRLLLSAGSLADRWEDLIWPVFFLLLAWVILWRVSTTYAERRARKSQNRI
Ga0209801_10108242	3300026326	Soil	VKLLTTLLIAALAALAVYSARRRIFFALKTGAVVYIVLLFGRLLLSAGSLADRWEDLIWPVFFLLLAWVILWRVSTTYAERRARKSQNRI
Ga0209059_13083452	3300026527	Soil	VKLLSTLLLAMLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLIWPVFFLLVGWAVLWWVSTTYAERRGKRARSASEAGRRGHRFR
Ga0209806_12688162	3300026529	Soil	VKLLTTLLIAALAALAVYSARRRIFFALKTGAVVYIVLLFGRLLLSAGSLADRWEDLIWPVFFLLLAWVILWRV
Ga0209805_10841881	3300026542	Soil	QFARAADPWSRGHGRRRARPVKLLSTLLLAMLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFLLVGWAVLWWVSTTYAERRGKRARSASEAGRRGHRFR
Ga0209577_100796833	3300026552	Soil	VKLLSTLLLAMLAALAVYSARRRIVFALKTGAVVYIVLLFARLLLSAGSLGERWEDLVWPVFFLLVGWAVLWWVSTTYAERRGKRARSASEAGRRGHRFR
Ga0208991_12073981	3300027681	Forest Soil	MKLLTTVLIACGVALAVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVGPVVIMLVAWAVLWVVSTNYAERRAKKSR
Ga0209580_105858192	3300027842	Surface Soil	MTKFVTTLLFAMLAALGVYMARRRILFALKTGAIVYVVLLFGRLLLSLGSIADRFDELLWPALFLFLAWTILWWVSIVYAERRDRLRARESRIRRASGAGRGAR
Ga0209166_1000319718	3300027857	Surface Soil	VKLLTTLLIAVLAALAVYSARRRILFALKTGAVVYIVLLFGRLILSAGSLADRWEDILWPVLIMLVAWVSLWWTSTVYAERRGRRTKVPAPAKTASGVGRPGR
Ga0209166_105618422	3300027857	Surface Soil	VYSARRRIVFALKTGATVYVVLLFGRLLLSAGSLADRWEDLVWPVLIMLVAWAVLWVASTNYAQRRAKKSR
Ga0209166_106296362	3300027857	Surface Soil	MKLLSTVLIACFAALVVYAARRRIVFALKTGAVVYVVVMFGRLLLSMDRWEDLIWPVLIMLIAWAVLYVASTNYAERRAKKTR
Ga0209590_107002892	3300027882	Vadose Zone Soil	MKLLTTVLIACAAALAVYAARRRIMFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVLIMLVAWAVLWVASTNYAERRAKKSR
Ga0137415_108441531	3300028536	Vadose Zone Soil	VKLLTTLLIAALAALAVYSARRRIFFALKTGAVVYIVLLFGRLLLSAGSLADRWEDLIWPVFFLLLAWVILWRISTTYAERRARKSQ
Ga0210278_12035122	3300030596	Soil	MKILSTLLVSVLAALAVYSARRRIVFALKTGAVVYVVLLFGRLLISAGSLADRWEDLFWPVVVMLVAWVILWSASTVYAERRDKKIPAKTASGVGRPGR
Ga0308203_10378192	3300030829	Soil	VKLLTTLLIACFAALVMYTARRRIMFALKTGAVVYVVVLFGRLLLSAGSLADRWEDLFWPVVVMAIAWVGLWVASTTYAERRAKKSRYRI
Ga0308189_102230321	3300031058	Soil	VYSARRRIVFALKTGAVVYIVVLFARLALDMGSLADRWEDLVWPVFLILVAWVILWFVSTAYAERRAPRKTRF
Ga0308194_102898881	3300031421	Soil	RRTRARPVSWRAVNDMKLLSTVLMACAAALVVYAARRRIVFALKTGAVVYVVLMFGRLLLSMDRWEDLVWPVAIMLVAWAVLWVASTNYAERRAKKSH
Ga0272428_10074055	3300031520	Rock	MKLLTTLLISCLAALAVYSARRRIMFALKTGAAVYVVLLFGRLLISAGSLADRWEDIFWPVVVMLIAWVILWWTSTLYMRRRGRNVSVKTASGAGRPGR
Ga0372943_0386997_40_306	3300034268	Soil	VKLLTTFLIAALAALAVYSARRRIVYALKTGAVVYVVVLFTRLVFSAGSLADRWEDLIWPVLILVALWGVLWFVSTQYAERRAARRGR
Ga0372946_0112492_947_1219	3300034384	Soil	MKLLTTLLIACMAALAVYAARRRIVFALKTGAVVYVVVLFGRLAMSAGSFADRWEDMVWPVFIMLVAWVVLWWVSTTYAERRTKKSRQRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences