Metagenome / Metatranscriptome Family F049951

Overview

Basic Information

• Family ID: F049951
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 146
• Average Sequence Length: 43 residues
• Representative Sequence: MKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
• Number of Associated Samples: 110
• Number of Associated Scaffolds: 146

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 74.66 %
• % of genes near scaffold ends (potentially truncated): 30.14 %
• % of genes from short scaffolds (< 2000 bps): 82.19 %
• Associated GOLD sequencing projects: 104
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (85.616 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (9.589 % of family members)
• Environment Ontology (ENVO): Unclassified (28.082 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (43.836 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 45.07%
  β-sheet: 0.00%
  Coil/Unstructured: 54.93%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF03454	MoeA_C	40.41
PF12804	NTP_transf_3	17.12
PF03364	Polyketide_cyc	8.22
PF02634	FdhD-NarQ	8.22
PF03205	MobB	2.05
PF11854	MtrB_PioB	2.05
PF03264	Cytochrom_NNT	2.05
PF01292	Ni_hydr_CYTB	1.37
PF01040	UbiA	1.37
PF03401	TctC	1.37

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	40.41
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	8.22
COG1763	Molybdopterin-guanine dinucleotide biosynthesis protein	Coenzyme transport and metabolism [H]	2.05
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	2.05
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	1.37
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	1.37
COG3038	Cytochrome b561	Energy production and conversion [C]	1.37
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.37
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	1.37
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	1.37

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.62 %
Unclassified	root	N/A	14.38 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.62 %
Unclassified	root	N/A	14.38 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.62 %
Unclassified	root	N/A	14.38 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.14 %
Unclassified	root	N/A	14.38 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74.66 %
Unclassified	root	N/A	14.38 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	56.16 %
Unclassified	root	N/A	14.38 %

Level 7

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.48 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.68 %
Unclassified	root	N/A	14.38 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	9.59 %

Level 8

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.05 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	9.59 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.68 %
Unclassified	root	N/A	14.38 %

Level 9

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.05 %
Unclassified	root	N/A	14.38 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	9.59 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.68 %

Level 10

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.05 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	4.11 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5.48 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.68 %
Unclassified	root	N/A	14.38 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459015|G14TP7Y01BYR5M	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683
2170459019|G14TP7Y02ITXNX	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568
3300000364|INPhiseqgaiiFebDRAFT_103106920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	509
3300000891|JGI10214J12806_10560586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	505
3300002075|JGI24738J21930_10010884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2013
3300002906|JGI25614J43888_10210374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	527
3300004114|Ga0062593_100296757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374
3300004114|Ga0062593_100708368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	983
3300004114|Ga0062593_100757282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	958
3300004463|Ga0063356_102924206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	736

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	1.37%
Environmental	Environmental	65.75%
Host-Associated	Host-Associated	32.88%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	1.37%
Plants	Host-Associated → Plants	32.88%
Solid Waste	Engineered → Solid Waste	1.37%
Terrestrial	Environmental → Terrestrial	64.38%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.68%
Grass	Engineered → Solid Waste → Grass	1.37%
Peat	Environmental → Terrestrial → Peat	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.49%
Roots	Host-Associated → Plants → Roots	0.68%
Sediment	Environmental → Aquatic → Sediment	0.68%
Soil	Environmental → Terrestrial → Soil	63.70%

Type

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	1.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.27%
Loam	Environmental → Terrestrial → Soil → Loam	16.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.42%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.68%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.05%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.68%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.68%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.37%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.11%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.68%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459015	Litter degradation PV4	Engineered
2170459019	Litter degradation MG4	Engineered
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_04292460	2170459015	Switchgrass, Maize And Mischanthus Litter	MKTFIVACATAVVIAIVGVMVLNAVPDSAEKAFSSSTSVRLGA
4MG_03256740	2170459019	Switchgrass, Maize And Mischanthus Litter	MKAFIMACAAAVAIAVVSVVVLNIVPDSAEHAFSSSTGVRLGA
INPhiseqgaiiFebDRAFT_1031069201	3300000364	Soil	MKAFVMACAAAVVIAIVSVVVLNTIPDSAENAFSSSTGVRLGA*
JGI10214J12806_105605862	3300000891	Soil	MFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST*
JGI24738J21930_100108844	3300002075	Corn Rhizosphere	MKAFIIACVAAIVIAVIGGVVLNSVPDSAERAFTSSA
JGI25614J43888_102103742	3300002906	Grasslands Soil	MKTFIVACVAAIVVAVIGGAVLYNVPDSAEKAFSSSTSVRLGA*
Ga0062593_1002967572	3300004114	Soil	MKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYTSPTGVRLGA*
Ga0062593_1007083682	3300004114	Soil	MKSFIVACAVAIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0062593_1007572821	3300004114	Soil	MKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST*
Ga0063356_1029242062	3300004463	Arabidopsis Thaliana Rhizosphere	MKAFIMACVAAIVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0062595_1000869532	3300004479	Soil	MKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0062595_1003415182	3300004479	Soil	MKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA*
Ga0066395_105164552	3300004633	Tropical Forest Soil	MKTFLMAFAAAIIIAVIGSVVLNSVPGSAENAFSSSTGVRLGA*
Ga0065704_107204541	3300005289	Switchgrass Rhizosphere	LNLWVWEDLFMKAFILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGV
Ga0065715_109607451	3300005293	Miscanthus Rhizosphere	MKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT*
Ga0070670_1003022442	3300005331	Switchgrass Rhizosphere	YGFGRMFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0066388_1001413852	3300005332	Tropical Forest Soil	MKAFIMACAAAVIIAVVGVVVLNSLPDSSEKVFSSSTGVRLGA*
Ga0066388_1001569472	3300005332	Tropical Forest Soil	MKTFLMACAVAIVIAVIGGVLLNSVPDSAENAFSSSTGVRLGA*
Ga0066388_1005366312	3300005332	Tropical Forest Soil	MKTFLMACAAAIIIAVIGGVLLNSMPDSAENAFSSSTGVRLGA*
Ga0066388_1005901083	3300005332	Tropical Forest Soil	MKAFIMACAAAVIIAIIGVVVLNTIPDSAENAFSSSTGVRFGV*
Ga0066388_1009044103	3300005332	Tropical Forest Soil	MKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYSSPTGVRLGA*
Ga0066388_1012090881	3300005332	Tropical Forest Soil	SSGSRERHDMKTFLMACAAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0066388_1026372372	3300005332	Tropical Forest Soil	MKAFLMACVVAIIIAVIGGVVLNSVPDSAENSFRSSTGVR*
Ga0066388_1054228962	3300005332	Tropical Forest Soil	MKTFLMAFAAAIIIAVIGSVVLNSVPDSAENAFSSSTGVRLGA*
Ga0070674_1021734331	3300005356	Miscanthus Rhizosphere	VLGEEQVIMKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA*
Ga0008090_132708761	3300005363	Tropical Rainforest Soil	MKAFIMACVAAVVIAVVSAVALNSVPDSSENAYRSSTGVR
Ga0070659_1001419432	3300005366	Corn Rhizosphere	MKSFIVACVVAVVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0070713_1001837092	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTSFIVACAATIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0070705_1003433162	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA*
Ga0070685_109624002	3300005466	Switchgrass Rhizosphere	MKAFILACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLST*
Ga0070741_1000621922	3300005529	Surface Soil	MKAFIIACVVAILIAVVGGVALNSVPDSAERAFTSPTGVSLT*
Ga0070735_102426952	3300005534	Surface Soil	MKSFIAACIIAVVVAVIGGAVLNSVPDTAEKAFSSSTSVRLGA*
Ga0070664_1001457961	3300005564	Corn Rhizosphere	FMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0068861_1007553262	3300005719	Switchgrass Rhizosphere	LYSQSLWVREDLFMKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT*
Ga0066903_1000437475	3300005764	Tropical Forest Soil	MKAFIMACVAAVVIAALSAVALNRVPDSSENAYRSSTGVRLGT*
Ga0066903_1002249921	3300005764	Tropical Forest Soil	MKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTG
Ga0066903_1018124412	3300005764	Tropical Forest Soil	MKTFLMACVAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0066903_1027788112	3300005764	Tropical Forest Soil	MKAFVMACAAAVIIAIVGVVVLNKVPDSAENAFSSSTGVRLGA*
Ga0068851_108317421	3300005834	Corn Rhizosphere	AFIIACVAAIVIAVIGGVVLNSVPDSAERAFTSSASVSLRT*
Ga0068863_1003000612	3300005841	Switchgrass Rhizosphere	MKSFIVACAVAIVIAVIGGVVLGTVPDSAEHAFSSASSVRLGA*
Ga0068858_1025325822	3300005842	Switchgrass Rhizosphere	GFGRMFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0081455_1000041723	3300005937	Tabebuia Heterophylla Rhizosphere	MKAFIMACVAAIVIAVIGGVALNSMPDSSEKAYSSPTGVRLGA*
Ga0070715_108695461	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTSFIVACPVTIAIAVIGGVVLGSVADSAEHAFSSASSVRLGA*
Ga0075018_100990362	3300006172	Watersheds	MKSFIVACVVAIVIAVIGGVVLGSVPDSAEDAFSSASSVRLGA*
Ga0070712_1000432604	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKAFVMACAAAVVIAIVGVVVLNTIPDSAERAFSSSTGVRLGA*
Ga0070712_1002245552	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKSFIVACALAIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0070712_1004348282	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKTFLVACAAAVVIAIVSVMVLNAVPDSAEKAFSSATSVRLGA*
Ga0075366_106730801	3300006195	Populus Endosphere	ILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0079222_101514762	3300006755	Agricultural Soil	MKAFIMACAAAVAIAVVSVVVLNIVPDSAEHAFSSSTGVRLGA*
Ga0079222_103906621	3300006755	Agricultural Soil	MKAFIMACAAAVIIAVVGVVALNSVPDSAEKAFTSPTSVSLT*
Ga0079222_107315072	3300006755	Agricultural Soil	MKAFIMACAAAIVIAIISVAVLNAVPDSAENAFSSSTGVRLGA*
Ga0079222_116936752	3300006755	Agricultural Soil	MKAFIMACVAAIVIAVIGLVALNRVPDSAEKAFSSPTGVSLDT*
Ga0079220_108422702	3300006806	Agricultural Soil	MACAAAIVIAIISVAVLNAVPDSAENAFSSSTGVRLGA*
Ga0075436_1005721661	3300006914	Populus Rhizosphere	MKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGV
Ga0079219_105145522	3300006954	Agricultural Soil	MKAFIMACAAAIIIAVISVVALNSVPDSAEKAFSSPTGVSLT*
Ga0111539_100039954	3300009094	Populus Rhizosphere	MFMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA*
Ga0111538_134435731	3300009156	Populus Rhizosphere	MKAFIMACVAAIVIAVVGGVALNSVPDSSEKAYTSPTGVRLGA*
Ga0105248_107061952	3300009177	Switchgrass Rhizosphere	MFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0105238_124891752	3300009551	Corn Rhizosphere	AFILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0126374_101613492	3300009792	Tropical Forest Soil	AAAIIIAVIGSVVLNSVPDSAENAFSSSTGVRLGA*
Ga0126380_100358203	3300010043	Tropical Forest Soil	MKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTGVRLGA*
Ga0126384_109227342	3300010046	Tropical Forest Soil	MKTFLMACAAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0126382_123616982	3300010047	Tropical Forest Soil	AYGFGRKTMKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYSSPTGVRLGA*
Ga0126376_114820581	3300010359	Tropical Forest Soil	LMACAAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0126376_121510742	3300010359	Tropical Forest Soil	VACITAIVLAVIGSVVLNSVPDSSEKAFSSSTGVRLGA*
Ga0126376_123277952	3300010359	Tropical Forest Soil	MKAFIMACAAAVIIAVVGVVALNSVPDSAEKAFTSPTGVSLT*
Ga0126378_106039512	3300010361	Tropical Forest Soil	MKAFVMACAAAVVIAIVGVVVLNKVPDSAENAFSSSTGVRLGA*
Ga0126379_106342462	3300010366	Tropical Forest Soil	FSERDNMKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTGVRLGA*
Ga0134125_104935822	3300010371	Terrestrial Soil	MKAFIVACVAAIVIAVIGGVVLNSVPDSAERAFTSSASVSLRT*
Ga0134125_108201862	3300010371	Terrestrial Soil	MKAFIMACAAAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLT*
Ga0134125_110100032	3300010371	Terrestrial Soil	MKAFIMACVVAIVIAVVGGVALNSVPDSAERAFTSSASVSLRS*
Ga0134128_128880802	3300010373	Terrestrial Soil	LWVWEDLFMKAFIMACAAAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLT*
Ga0126381_1017569161	3300010376	Tropical Forest Soil	MKAFLIACAAAIVIAVIGSVALNSVPDSSENAFSSSTGV
Ga0157352_10005681	3300012519	Unplanted Soil	FILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0157304_10564402	3300012882	Soil	MFMKAFIMACVVAVVIAVFGVVALNSVPDSAEKAFSSPTGVSLST*
Ga0164303_100505593	3300012957	Soil	MKTFIVACATAVVIAIVGVMVLNAVPDSAEKAFSSSTSVRLGA*
Ga0164308_106557011	3300012985	Soil	AAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0157374_107341171	3300013296	Miscanthus Rhizosphere	MKSFIVACVVAVVIAVIGGVVLGSVPDSAEHAFSS
Ga0157378_102157862	3300013297	Miscanthus Rhizosphere	MKSFIVACAVAIVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA*
Ga0157372_111110282	3300013307	Corn Rhizosphere	GFGRMFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST*
Ga0157379_105731331	3300014968	Switchgrass Rhizosphere	MFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPT
Ga0173480_104601012	3300015200	Soil	AAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0132258_105511244	3300015371	Arabidopsis Rhizosphere	MKAFVMACAAAVVIAIVGVVVLNTIPDSAENAFSSSTGVRLGA*
Ga0132258_115372133	3300015371	Arabidopsis Rhizosphere	MKAFIMACAAAIVIAVVGGVALNSVPDSAQKAFTSSTGVRLGA*
Ga0132258_123267792	3300015371	Arabidopsis Rhizosphere	MKSFIVACVVAIVIAVIGGVVLGSVPDSAEDAFSSSSSVRLGA*
Ga0132256_1002272841	3300015372	Arabidopsis Rhizosphere	VMACAAAVIIAIVGVVVLNTIPDSAENAFSSSTGVRLGA*
Ga0187824_101069252	3300017927	Freshwater Sediment	MKMFIMACVAAIVIAVIGGVALNSAQETVAKAFSSPTSVDLGA
Ga0187786_100463892	3300017944	Tropical Peatland	MKSFIVACVIAIVIAVIGGAVLSSVPDTAEKAFSSSTSVRLGA
Ga0187786_104910102	3300017944	Tropical Peatland	MKSFLVACVAAIILAVIGGVVLSSVPDTAEKAFSSSTGVRLGA
Ga0187785_101349332	3300017947	Tropical Peatland	MKSFLVACVAAIIIAVIGGVVLSSVPDTAEKAFSSSTGVRLGA
Ga0187777_108085572	3300017974	Tropical Peatland	MKAFVMACAAAVVIAIVGVVVLNTIPDSAEHEFSSSTGVRLGA
Ga0187774_100217981	3300018089	Tropical Peatland	ACVAAVIIAIVGVVVLNTIPDSAENAFSSSTGVRLGA
Ga0187774_100412022	3300018089	Tropical Peatland	MKTFIMACVAAIVIAVIGGVVLNSVPDSAQNAFSSSASVRLGA
Ga0173481_100353672	3300019356	Soil	MKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST
Ga0126371_1000123816	3300021560	Tropical Forest Soil	MKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTGVRLGA
Ga0126371_102441971	3300021560	Tropical Forest Soil	MKAFIMACVAAVVIAVVSAVALNIVPDSSENAYRSSTGVRLGT
Ga0126371_112814531	3300021560	Tropical Forest Soil	MKAFLMACVVAIIIAVIGGVVLNSVPDSAENSFRSSTGVR
Ga0126371_114678752	3300021560	Tropical Forest Soil	MKAFIMACAAAVIIAIIGVVVLNTIPDSAENAFSSSTGVRFGV
Ga0247799_10438322	3300023072	Soil	MKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
Ga0207697_102338992	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA
Ga0207710_100204232	3300025900	Switchgrass Rhizosphere	MRSFIVACAVAIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA
Ga0207699_111306291	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKAFVMACAAAVVIAIVGVVVLNTIPDSAERAFSSSTGVRL
Ga0207645_100094626	3300025907	Miscanthus Rhizosphere	MKSFIVACVVAVVIAGIGGVVLGSVPDTAEDAFSSASSVRLGA
Ga0207660_109228232	3300025917	Corn Rhizosphere	MKAFIMACVAAVVIAVVGGVVLNSMPDSSEKAYTSPTG
Ga0207662_103002491	3300025918	Switchgrass Rhizosphere	CAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
Ga0207650_102442092	3300025925	Switchgrass Rhizosphere	MKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0207687_104615262	3300025927	Miscanthus Rhizosphere	VVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA
Ga0207701_110521072	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLG
Ga0207701_111783661	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RARILYSESLWVREDLFMKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT
Ga0207690_100565154	3300025932	Corn Rhizosphere	MKSFIVACVVAVVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA
Ga0207690_105026692	3300025932	Corn Rhizosphere	MKAFIMACVAAVVIAVIGVVALNRVPYSAEKAFSSPTGVSLDT
Ga0207670_100934571	3300025936	Switchgrass Rhizosphere	MKAFVMACVAAIVIAVVGGVGLNSVPDSSSKAYSSPTGVRLGA
Ga0207711_112280121	3300025941	Switchgrass Rhizosphere	AYGFGRMFMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA
Ga0207679_104382132	3300025945	Corn Rhizosphere	MFMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA
Ga0207668_101860351	3300025972	Switchgrass Rhizosphere	ILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
Ga0207658_105568963	3300025986	Switchgrass Rhizosphere	MKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLT
Ga0207703_107737833	3300026035	Switchgrass Rhizosphere	GFGRMFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0207678_104275441	3300026067	Corn Rhizosphere	FIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLDT
Ga0207702_101675791	3300026078	Corn Rhizosphere	MKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSV
Ga0207641_104265252	3300026088	Switchgrass Rhizosphere	MKSFIVACAVAIVIAVIGGVVLGTVPDSAEHAFSSASSVRLGA
Ga0209240_12346132	3300026304	Grasslands Soil	MKTFIVACVAAIVVAVIGGAVLYNVPDSAEKAFSSSTSVRLGA
Ga0207472_1014632	3300027427	Soil	MKAFIMACVAAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST
Ga0209971_11138382	3300027682	Arabidopsis Thaliana Rhizosphere	MKAFIMACVAAVVIAVIGVVVLNRVPDSAEKAFSSPTGVSLDT
Ga0209974_103813101	3300027876	Arabidopsis Thaliana Rhizosphere	FMKAFIMACVAAIVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0268264_101563333	3300028381	Switchgrass Rhizosphere	MKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA
Ga0268264_112810882	3300028381	Switchgrass Rhizosphere	MKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT
Ga0170824_1116359262	3300031231	Forest Soil	MKAFIIACAAAIVIAVLGSVVLNSVPGSAEEAFSSSTGVRLGA
Ga0265325_1000002529	3300031241	Rhizosphere	MKSFIVACVIAVVLAVIGGVVLNSVPDSAEKTFSSSTGVRLGA
Ga0310813_1000226912	3300031716	Soil	MKAFIMACVAAIVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0307469_103177603	3300031720	Hardwood Forest Soil	MKSFIVACVVAIVIAVIGGVVLGSVPDSAEDAFSSASSVRLGA
Ga0307469_116553711	3300031720	Hardwood Forest Soil	LGEEQAIMTSFIVACPVTIAIAVIGGVVLGSVADSAEHAFSSASSVRLGA
Ga0307468_1004412222	3300031740	Hardwood Forest Soil	MKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYTSPTGVRLGA
Ga0310885_106790861	3300031943	Soil	MKAFVMACVAAIVIAVVGGVALNRVPDSAEKAFSSPTGVSLDT
Ga0307470_100203553	3300032174	Hardwood Forest Soil	MKSFIVACVVAVVIAVIGGVVLGSVPDTAEDVFTSASSVRLGA
Ga0307471_1011820362	3300032180	Hardwood Forest Soil	MKAFVMACAAAVVIAIVGVVVLNTIPDSAESAFSSSTGVRLGA
Ga0307472_1008645212	3300032205	Hardwood Forest Soil	MKPFIVACVAAIVIAVVGGVALNRVPDSAENAFSSATGVRLGT
Ga0307472_1027376652	3300032205	Hardwood Forest Soil	IPMKAFVMACAAAVVIAIVGLVVLNTIPDSAEHEFSSSTGVRLGA
Ga0335085_100287063	3300032770	Soil	MKSFLVACVAAIIIAVIGVVALGSVPDSAESVFSSSTGVRLGA
Ga0335080_111783821	3300032828	Soil	MKAFVMACAAAVVIAIVGVVVLNAIPDSAEHAFSSSTGVRLGA
Ga0335084_102374652	3300033004	Soil	MKTFIVACITAIVLAVIGGAVLNSVPDTAEKAFSSSTGVRLGA
Ga0335084_102574983	3300033004	Soil	MKSFLVACVAAIIIAVIGIVALGSVPDSAESVFSSSTGVRLGA
Ga0316628_1002469142	3300033513	Soil	MKAFIMACVAAIVIAVIGGVALNSVPDSAEKAFSSSTGVHFGA
Ga0316628_1008764042	3300033513	Soil	MKVFIMASVAAIVIAVIGVVALNSVPDSAEKAFSSSTGVRLGA
Ga0314868_002626_466_597	3300033758	Peatland	MKTFIVACVAAIIIAVVGGVALNNVPDTAEKAFSSSTGVRLGA
Ga0326723_0425218_216_347	3300034090	Peat Soil	MKTFIMACVAAIVIAVIGGVVLNSVPDSAENAFSSSASVRLGA
Ga0373948_0019817_888_1025	3300034817	Rhizosphere Soil	MFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST