Metagenome / Metatranscriptome Family F049853

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049853
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	60 residues
Representative Sequence	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR
Number of Associated Samples	117
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.85 %
% of genes near scaffold ends (potentially truncated)	25.34 %
% of genes from short scaffolds (< 2000 bps)	82.19 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.918 % of family members)
Environment Ontology (ENVO)	Unclassified (34.247 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.17% β-sheet: 0.00% Coil/Unstructured: 44.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.0: automated matches	d5hjfa_	5hjf	0.89825
a.25.1.1: Ferritin	d3t9ja_	3t9j	0.87997
a.25.1.0: automated matches	d4cyba_	4cyb	0.87979
a.25.1.0: automated matches	d6sv1a1	6sv1	0.8793
a.25.1.0: automated matches	d4a25a_	4a25	0.8789

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF05957	DUF883	41.78
PF06441	EHN	15.75
PF01219	DAGK_prokar	6.16
PF02518	HATPase_c	4.11
PF12697	Abhydrolase_6	3.42
PF13410	GST_C_2	2.74
PF02798	GST_N	2.74
PF04011	LemA	0.68
PF04403	PqiA	0.68
PF04392	ABC_sub_bind	0.68
PF04536	TPM_phosphatase	0.68
PF13616	Rotamase_3	0.68
PF02464	CinA	0.68
PF01370	Epimerase	0.68
PF00903	Glyoxalase	0.68
PF02470	MlaD	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	41.78
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	15.75
COG0818	Diacylglycerol kinase	Lipid transport and metabolism [I]	6.16
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.68
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.68
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.68
COG2995	Intermembrane transporter PqiABC subunit PqiA	Cell wall/membrane/envelope biogenesis [M]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.03 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	63.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	62.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.37 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	62.33 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	62.33 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.68 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0726383	All Organisms → cellular organisms → Bacteria	6870	Open in IMG/M
3300002562\|JGI25382J37095_10122136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	887	Open in IMG/M
3300002568\|C688J35102_120927185	All Organisms → cellular organisms → Bacteria → Proteobacteria	2440	Open in IMG/M
3300002568\|C688J35102_120935075	All Organisms → cellular organisms → Bacteria → Proteobacteria	2561	Open in IMG/M
3300002906\|JGI25614J43888_10009783	All Organisms → cellular organisms → Bacteria → Proteobacteria	3104	Open in IMG/M
3300002917\|JGI25616J43925_10305175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	592	Open in IMG/M
3300003267\|soilL1_10048680	All Organisms → cellular organisms → Bacteria	5421	Open in IMG/M
3300003267\|soilL1_10110393	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300003319\|soilL2_10146486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1130	Open in IMG/M
3300003321\|soilH1_10158076	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300003324\|soilH2_10179594	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300003465\|P52013CM_1004907	All Organisms → cellular organisms → Bacteria → Proteobacteria	11053	Open in IMG/M
3300003465\|P52013CM_1014100	All Organisms → cellular organisms → Bacteria → Proteobacteria	3232	Open in IMG/M
3300004114\|Ga0062593_100347424	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300004153\|Ga0063455_100326795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	859	Open in IMG/M
3300004463\|Ga0063356_101484882	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300004463\|Ga0063356_105437289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	547	Open in IMG/M
3300005167\|Ga0066672_10308336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1030	Open in IMG/M
3300005171\|Ga0066677_10568012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	647	Open in IMG/M
3300005172\|Ga0066683_10771312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	562	Open in IMG/M
3300005176\|Ga0066679_10006150	All Organisms → cellular organisms → Bacteria	5618	Open in IMG/M
3300005176\|Ga0066679_10037937	All Organisms → cellular organisms → Bacteria	2705	Open in IMG/M
3300005177\|Ga0066690_10849945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	588	Open in IMG/M
3300005181\|Ga0066678_10265180	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005184\|Ga0066671_10200501	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005184\|Ga0066671_10475275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	802	Open in IMG/M
3300005187\|Ga0066675_10736926	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005340\|Ga0070689_100987760	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005343\|Ga0070687_100325526	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005355\|Ga0070671_101559281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300005436\|Ga0070713_101170844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	744	Open in IMG/M
3300005436\|Ga0070713_101497562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	655	Open in IMG/M
3300005445\|Ga0070708_100997852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	785	Open in IMG/M
3300005446\|Ga0066686_10636107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	725	Open in IMG/M
3300005447\|Ga0066689_10562360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	721	Open in IMG/M
3300005458\|Ga0070681_11644030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	568	Open in IMG/M
3300005468\|Ga0070707_101430800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	658	Open in IMG/M
3300005518\|Ga0070699_100018748	All Organisms → cellular organisms → Bacteria → Proteobacteria	5943	Open in IMG/M
3300005540\|Ga0066697_10044462	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
3300005540\|Ga0066697_10058475	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300005545\|Ga0070695_100553403	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005554\|Ga0066661_10859077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	531	Open in IMG/M
3300005556\|Ga0066707_10099869	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300005561\|Ga0066699_10184453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1445	Open in IMG/M
3300005561\|Ga0066699_10406942	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005568\|Ga0066703_10810064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	535	Open in IMG/M
3300005569\|Ga0066705_10109748	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005575\|Ga0066702_10307819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	966	Open in IMG/M
3300005576\|Ga0066708_10090335	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300005598\|Ga0066706_11277599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	556	Open in IMG/M
3300005615\|Ga0070702_101479953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	558	Open in IMG/M
3300006046\|Ga0066652_100014958	All Organisms → cellular organisms → Bacteria	5147	Open in IMG/M
3300006173\|Ga0070716_101523845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	547	Open in IMG/M
3300006755\|Ga0079222_10332409	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300006794\|Ga0066658_10676386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	568	Open in IMG/M
3300006806\|Ga0079220_10300598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	992	Open in IMG/M
3300006806\|Ga0079220_10751543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	727	Open in IMG/M
3300006854\|Ga0075425_100124871	All Organisms → cellular organisms → Bacteria → Proteobacteria	2939	Open in IMG/M
3300006854\|Ga0075425_100266611	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300006854\|Ga0075425_100791618	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300006903\|Ga0075426_10286076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1204	Open in IMG/M
3300006914\|Ga0075436_100084143	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300006918\|Ga0079216_11351317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	586	Open in IMG/M
3300006954\|Ga0079219_12446479	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300007004\|Ga0079218_13967255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	503	Open in IMG/M
3300007255\|Ga0099791_10396505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	664	Open in IMG/M
3300007255\|Ga0099791_10609269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	534	Open in IMG/M
3300009012\|Ga0066710_104343166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	530	Open in IMG/M
3300009094\|Ga0111539_11334512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	832	Open in IMG/M
3300009137\|Ga0066709_104021433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	535	Open in IMG/M
3300009147\|Ga0114129_10786345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1215	Open in IMG/M
3300010044\|Ga0126310_11805769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	510	Open in IMG/M
3300010329\|Ga0134111_10382012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	600	Open in IMG/M
3300010360\|Ga0126372_13249294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300010401\|Ga0134121_10035079	All Organisms → cellular organisms → Bacteria → Proteobacteria	4078	Open in IMG/M
3300010401\|Ga0134121_10084161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2648	Open in IMG/M
3300010403\|Ga0134123_11707067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	681	Open in IMG/M
3300010403\|Ga0134123_13401582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	514	Open in IMG/M
3300011270\|Ga0137391_11107553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	640	Open in IMG/M
3300012189\|Ga0137388_11605689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	586	Open in IMG/M
3300012207\|Ga0137381_10531087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1026	Open in IMG/M
3300012212\|Ga0150985_101604471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	707	Open in IMG/M
3300012212\|Ga0150985_101891548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	763	Open in IMG/M
3300012212\|Ga0150985_103682314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	627	Open in IMG/M
3300012212\|Ga0150985_111663714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1263	Open in IMG/M
3300012212\|Ga0150985_117130147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	807	Open in IMG/M
3300012349\|Ga0137387_10771399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	696	Open in IMG/M
3300012350\|Ga0137372_10763580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	696	Open in IMG/M
3300012354\|Ga0137366_10040307	All Organisms → cellular organisms → Bacteria → Proteobacteria	3615	Open in IMG/M
3300012356\|Ga0137371_11082539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	604	Open in IMG/M
3300012361\|Ga0137360_11023284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	713	Open in IMG/M
3300012362\|Ga0137361_10650275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	965	Open in IMG/M
3300012386\|Ga0134046_1127347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	635	Open in IMG/M
3300012469\|Ga0150984_102628508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	678	Open in IMG/M
3300012469\|Ga0150984_107178612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1292	Open in IMG/M
3300012685\|Ga0137397_11023992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	606	Open in IMG/M
3300012922\|Ga0137394_10701532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	852	Open in IMG/M
3300012922\|Ga0137394_11483221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	537	Open in IMG/M
3300012925\|Ga0137419_10070353	All Organisms → cellular organisms → Bacteria → Proteobacteria	2329	Open in IMG/M
3300012925\|Ga0137419_11570331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	559	Open in IMG/M
3300012927\|Ga0137416_10307942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1315	Open in IMG/M
3300012927\|Ga0137416_11571482	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300013297\|Ga0157378_13163868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300014150\|Ga0134081_10170877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	724	Open in IMG/M
3300015079\|Ga0167657_1001006	All Organisms → cellular organisms → Bacteria → Proteobacteria	6037	Open in IMG/M
3300015079\|Ga0167657_1032136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	640	Open in IMG/M
3300015241\|Ga0137418_10743887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	744	Open in IMG/M
3300015371\|Ga0132258_10435826	All Organisms → cellular organisms → Bacteria	3264	Open in IMG/M
3300015372\|Ga0132256_103219358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	549	Open in IMG/M
3300017659\|Ga0134083_10331637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	651	Open in IMG/M
3300018089\|Ga0187774_10540623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	742	Open in IMG/M
3300018431\|Ga0066655_10759860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	658	Open in IMG/M
3300018468\|Ga0066662_11336571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	737	Open in IMG/M
3300018482\|Ga0066669_10784893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	842	Open in IMG/M
3300018482\|Ga0066669_11823955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300020070\|Ga0206356_10518387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	529	Open in IMG/M
3300020202\|Ga0196964_10529409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	577	Open in IMG/M
3300020215\|Ga0196963_10508202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	546	Open in IMG/M
3300021953\|Ga0213880_10068232	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300025898\|Ga0207692_10340216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	923	Open in IMG/M
3300025912\|Ga0207707_10005577	All Organisms → cellular organisms → Bacteria → Proteobacteria	11012	Open in IMG/M
3300025921\|Ga0207652_11019878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	727	Open in IMG/M
3300025922\|Ga0207646_10330917	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300025936\|Ga0207670_10871605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	753	Open in IMG/M
3300025939\|Ga0207665_10087934	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300026304\|Ga0209240_1111665	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300026317\|Ga0209154_1267878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	576	Open in IMG/M
3300026326\|Ga0209801_1089121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1345	Open in IMG/M
3300026328\|Ga0209802_1169973	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300026523\|Ga0209808_1089789	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300026548\|Ga0209161_10460609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	560	Open in IMG/M
3300026550\|Ga0209474_10310401	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300026550\|Ga0209474_10611092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	558	Open in IMG/M
3300027748\|Ga0209689_1194217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	899	Open in IMG/M
3300028536\|Ga0137415_10092170	All Organisms → cellular organisms → Bacteria	2886	Open in IMG/M
3300028536\|Ga0137415_10096976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2801	Open in IMG/M
3300028536\|Ga0137415_10281551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1468	Open in IMG/M
3300030511\|Ga0268241_10078353	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031548\|Ga0307408_102119668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	542	Open in IMG/M
3300031720\|Ga0307469_10218815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1504	Open in IMG/M
3300031740\|Ga0307468_100104551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1694	Open in IMG/M
3300031820\|Ga0307473_10306762	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300032174\|Ga0307470_10426833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	946	Open in IMG/M
3300032180\|Ga0307471_100040394	All Organisms → cellular organisms → Bacteria → Proteobacteria	3729	Open in IMG/M
3300032205\|Ga0307472_100961191	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300032205\|Ga0307472_102295215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.93%
Host-Associated	Host-Associated	14.38%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.93%
Plants	Host-Associated → Plants	14.38%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.48%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.81%
Loam	Environmental → Terrestrial → Soil → Loam	14.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.74%
Sand	Environmental → Terrestrial → Soil → Sand	1.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.11%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.74%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	1.37%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.11%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.05%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.37%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.37%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.37%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_072638314	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MPQLSSDAELLQKLKQVEENAWLIFSELPPGGARTRALHVFLDAKDLKARLERFAALLDQPGHR*
JGI25382J37095_101221362	3300002562	Grasslands Soil	MGNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR*
C688J35102_1209271852	3300002568	Soil	MENTDLLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSRLEQMPEIPSVNQADHR*
C688J35102_1209350753	3300002568	Soil	VENTEFLRKLKQVQDNAWMLFNELPPCGARTRALHVFLDAKELSARLEKTPLASADKPDHG*
JGI25614J43888_100097833	3300002906	Grasslands Soil	VPNAELLQKLKQVEDNAWLLFSELPPSVARTRALHVYLDAKELKSRLKENLELLDHAGNR
JGI25616J43925_103051751	3300002917	Grasslands Soil	YGPRVPNAELLQKLKQVEDNAWLLFSELPPSVARTRALHVYLDAKELKSRLKENLELLDHAGNR*
soilL1_100486805	3300003267	Sugarcane Root And Bulk Soil	MENADLLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKLRFEQLRESLADKDE*
soilL1_101103932	3300003267	Sugarcane Root And Bulk Soil	MENAELLQKLKQVEDNAWMLFNELPPCVARNRALHVFLDAKELKSRLEQLPESLANKTE*
soilL2_101464863	3300003319	Sugarcane Root And Bulk Soil	VRVDNVEIFQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSRLEKLQQNSGQRP
soilH1_101580762	3300003321	Sugarcane Root And Bulk Soil	VENADLLLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLTARLERLALTNQADNRQ*
soilH2_101795942	3300003324	Sugarcane Root And Bulk Soil	VGENIEILRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSRLEKLQQNSVPST*
P52013CM_100490713	3300003465	Ore Pile And Mine Drainage Contaminated Soil	VEDTYLLQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSRLEKLQTAPDPSATPPG*
P52013CM_10141003	3300003465	Ore Pile And Mine Drainage Contaminated Soil	VENAYLLQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKARLEKIEKMGSDPI*
Ga0062593_1003474244	3300004114	Soil	VPNAELIRKLQQVEENAWMLFAELPHSAARNRALHVYLDARELKARLEKLEATVTELRR*
Ga0063455_1003267951	3300004153	Soil	VEHADLLQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSKLEQLRERLADQSGNG*
Ga0063356_1014848822	3300004463	Arabidopsis Thaliana Rhizosphere	MAAARVRVCYVASVENADLLQKLKQVEDNAWMLFSELPPCGARTRALHVFLDAKDLKARLEKLGPLADQTAHR*
Ga0063356_1054372892	3300004463	Arabidopsis Thaliana Rhizosphere	VENAELLRKLKQVQDNAWMVFNELPPCGARNRALHVFLDAKELSARLEESPPPLPAQPLGE*
Ga0066672_103083363	3300005167	Soil	GMQDAELLQKLKQVEENAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLLDQPGHR*
Ga0066677_105680121	3300005171	Soil	KLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLAEKLNSVLSA*
Ga0066683_107713121	3300005172	Soil	LQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLENLAPPLPTESPR*
Ga0066679_100061503	3300005176	Soil	MQDAELLQKLKQVEENAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLLDQPGHR
Ga0066679_100379376	3300005176	Soil	VQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLPLLDDAGHR*
Ga0066690_108499451	3300005177	Soil	VENAQLLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLAEKLNSVLSA*
Ga0066678_102651802	3300005181	Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLENLAPPLPTELPR
Ga0066671_102005013	3300005184	Soil	VRVENLEIFQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKARLEKLQQDSVPST
Ga0066671_104752752	3300005184	Soil	LARVQNADLLQKLKQVEDNAWLLFSELPPCVARTRALHVFLDAKDLKARLENLAALLDDADHG*
Ga0066675_107369261	3300005187	Soil	VLGMQDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLLDQPPHR*
Ga0070689_1009877603	3300005340	Switchgrass Rhizosphere	VENAELLRKLKQVQDNAWMVFNELPPCGARNRALHVFLDAKELSARLEES
Ga0070687_1003255261	3300005343	Switchgrass Rhizosphere	KAELIRKLQQVEENAWMLFAELPHSAARNRALHVYLDAKELKARLEKLEATVTELRR*
Ga0070671_1015592812	3300005355	Switchgrass Rhizosphere	VENADLLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELTSRLERLPEPLADKADHR*
Ga0070713_1011708442	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSGVLPAAAETELLLKLKQVQDNAWLVFNELPPGAARTRALHVFLDAQELKKRLEPLLHEPDHR*
Ga0070713_1014975621	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VQNADLLQKLKQVEDNAWLLFSELPPCVARTRALHVFLDAKDLKARLENLAALLDHADHG
Ga0070708_1009978522	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPPSSSDAELLQKLKQVEENAWLIFSELPPSGARTRALHVFLDAKDLKARLERFAALLEESGHR*
Ga0066686_106361072	3300005446	Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLENLAPPLPTESPR
Ga0066689_105623602	3300005447	Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKSRLENLAPP
Ga0070681_116440302	3300005458	Corn Rhizosphere	LARVQNAELLQKLKQVEDNAWLLFSELPPCVARTRALHVFLDAQELKKRLEPLLHEPDHR
Ga0070707_1014308002	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LARVQNAELLQKLKQVEDNAWLLFSELPPCVARTRALHVFLDAKDLKARLENLAALLDHADHG*
Ga0070699_1000187481	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LARVQNAELLQKLKQVEDNAWLLFSELPPCVARTRALHVFLDAKDLKARLENLAPLLDDADHG*
Ga0066697_100444623	3300005540	Soil	VENAQLLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLAEKLNSVLST*
Ga0066697_100584754	3300005540	Soil	MQDAELLQKLKQVEENAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLLDQSGHR
Ga0070695_1005534031	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPQLSSDAELLQKLKQVEENAWLIFSELPPGGARTRALHVFLDAKDLKARLERVAALLDE
Ga0066661_108590772	3300005554	Soil	MQKLKQVEENAWLLFSELPPSGARTRALHVFLDAKDLKLRLERLAALLDQPRHG*
Ga0066707_100998692	3300005556	Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR*
Ga0066699_101844532	3300005561	Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARNRALHVYLDAKELKSRLENLAPPLPTELPR
Ga0066699_104069423	3300005561	Soil	VLISPSGVEILQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSRLEK
Ga0066703_108100642	3300005568	Soil	VQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLENLPLLDDAGHR*
Ga0066705_101097483	3300005569	Soil	VENAQLLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLAEKLNSLLST*
Ga0066702_103078193	3300005575	Soil	VQNAELLRKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR*
Ga0066708_100903354	3300005576	Soil	MQDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLARLAPLLDQPPHR
Ga0066706_112775992	3300005598	Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLD
Ga0070702_1014799532	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VENAELLRKLKQVQDNAWMVFNELPPCGARNRALHVFLDAKELSARLEESLPPLPDPSLS
Ga0066652_1000149586	3300006046	Soil	VENSELLRKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELAAKFLSTDLLNHADHR*
Ga0070716_1015238452	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MENVEIFQKLKQVEDNAWMLFNELPPCGARTRALHVYLDAKDLKARLEKLNSATESPQ*
Ga0079222_103324092	3300006755	Agricultural Soil	MPQLSSDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLVRLAALLDQPRHG*
Ga0066658_106763861	3300006794	Soil	MQDAELLQKLKQVEENAWLIFSELPPSGARTRALHVFLDAKDLKARLARLAPLLDQPPHR
Ga0079220_103005982	3300006806	Agricultural Soil	VENVDIFQKLKQVEDNAWILFNELPPCGARTRALHVFLDAKDLKSRLEKLQQNSVPST*
Ga0079220_107515431	3300006806	Agricultural Soil	MLPAARDAELLQKLKQVEENAWLLFSELPPCVARTRALHVFLDAKDLKARLEE
Ga0075425_1001248711	3300006854	Populus Rhizosphere	MQDAELLQKLKQVEENAWLIFSELPPSGARTRALHVFLDAKDLKQRLERLAALLDQPRHG
Ga0075425_1002666113	3300006854	Populus Rhizosphere	VLPHAAETELLLKLKQVQDNAWLVFNELPPGAARTRALHVFLDAQELKKRLEPLLHEPDHR*
Ga0075425_1007916181	3300006854	Populus Rhizosphere	LACVQNADLLQKLKQVEDNAWLLFSELPPCVARTRALHVFLDAKDLKARLENLAALLDHADHG*
Ga0075426_102860761	3300006903	Populus Rhizosphere	QDAELLQKLKQVEENAWMLFSELPPSGARTRALHVFLDAKDMKARLERLAALLDQPVNR*
Ga0075436_1000841432	3300006914	Populus Rhizosphere	VLSHTAETELLLKLKQVQDNAWLVFNELPPGAARTRALHVFLDAQELKKRLEPLLHEPDHR*
Ga0079216_113513171	3300006918	Agricultural Soil	MAAARVRVCYVASVENADLLQKLKQVEDNAWMLFSELPPCGARTRALHVFLDAKDLKARLEKLGPLADQAAHR*
Ga0079219_124464792	3300006954	Agricultural Soil	MKLAQVEQNAWMLFSELPPCGAKTRALHVYLDAKAMKAALQPKEVP*
Ga0079218_139672551	3300007004	Agricultural Soil	MENAELLQRLQKVEENAWMIFAELPHSAARNRALHVYLDAKELKSRLARSDEPSVAVVTELAR*
Ga0099791_103965051	3300007255	Vadose Zone Soil	MENTEFLRKLKQVEDNAWMLFSELPPCGARTRALHVFLDAKELKARLERLAPDLLDHADNR*
Ga0099791_106092693	3300007255	Vadose Zone Soil	VATVASNAELLRKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLPLLDNAGHR*
Ga0066710_1043431662	3300009012	Grasslands Soil	KLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLARLAPLLDQPPHR
Ga0111539_113345122	3300009094	Populus Rhizosphere	VENAELLRKIKQVQDNAWMVFNELPPCGARNRALHVFLDAKELSARLEESPPPLPAQPLGE*
Ga0066709_1040214332	3300009137	Grasslands Soil	MQNAELLRKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR*
Ga0114129_107863453	3300009147	Populus Rhizosphere	VPHLANGAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLPLLDNAGHR*
Ga0126310_118057692	3300010044	Serpentine Soil	VENADLLLKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSKLEKLPGQRVERPE*
Ga0134111_103820121	3300010329	Grasslands Soil	MQNAELLQKLKQIEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLEDLAPPLPTESPR
Ga0126372_132492942	3300010360	Tropical Forest Soil	VQDTELLQKLKQVEVNAWLLFSELPPSGARTRALHVFLDAKDLKLRLERLAALLDQPGHG
Ga0134121_100350796	3300010401	Terrestrial Soil	LLQKLKQVEENAWLIFSELPPSGARTRALHVFLDAKDLKARLERFAALLEESGHR*
Ga0134121_100841613	3300010401	Terrestrial Soil	VENPEILRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKLRLERLAARASATESPR*
Ga0134123_117070672	3300010403	Terrestrial Soil	VPKAELIRKLQQVEENAWMLFAELPHSAARNRALHVYLDAKELKARLEKLEATVTELRR*
Ga0134123_134015821	3300010403	Terrestrial Soil	VENADLLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELTSRLERLPEPLADK
Ga0137391_111075532	3300011270	Vadose Zone Soil	VENAELLRKLKQVEDNAWMLFNELPPCVARTRALHVFLDAKELKSRLENPAPPELPATELPR*
Ga0137388_116056892	3300012189	Vadose Zone Soil	NAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKSRLENPAPPELPATELPR
Ga0137381_105310872	3300012207	Vadose Zone Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLAPPLPTELPR
Ga0150985_1016044712	3300012212	Avena Fatua Rhizosphere	MQDVELLQKLKQVEENAWLIFSELPPSGARTRALHVFLDAKDLKARLERLAPLLEHPGHR
Ga0150985_1018915482	3300012212	Avena Fatua Rhizosphere	VENTDLLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSRLENLTPITGDRPEGFASANKPDHR*
Ga0150985_1036823142	3300012212	Avena Fatua Rhizosphere	MAAARVRLCYVASVENTEFLRKLKQVEDNAWILFNELPPCGARTRALHVFLDAKALTSRLEKMPEATLADQPDNR*
Ga0150985_1116637142	3300012212	Avena Fatua Rhizosphere	VENTELLRKLKQVQDNAWMLFNELPPCGARTRALHVFLDAKELTARLEMPQPPLADKADYR*
Ga0150985_1171301471	3300012212	Avena Fatua Rhizosphere	VENTELFRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKARLENLPQPLPDKRDNG*
Ga0137387_107713992	3300012349	Vadose Zone Soil	VGNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR*
Ga0137372_107635802	3300012350	Vadose Zone Soil	AARTALCYRLGMQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLENPAEFGDGARTP*
Ga0137366_100403074	3300012354	Vadose Zone Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLENPAEFGDGARTP
Ga0137371_110825391	3300012356	Vadose Zone Soil	GNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR*
Ga0137360_110232842	3300012361	Vadose Zone Soil	VVISPSGNEILQKLKQVEDNAWILFNELPPCGARTRALHVFLDAKELKLRLEKLTATESRQ*
Ga0137361_106502751	3300012362	Vadose Zone Soil	NAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLENLPLLDDAGHR*
Ga0134046_11273472	3300012386	Grasslands Soil	VGNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLENLAPPLPTESPR
Ga0150984_1026285082	3300012469	Avena Fatua Rhizosphere	VPDAELLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSRLEKLPDLPELGAQP
Ga0150984_1071786123	3300012469	Avena Fatua Rhizosphere	VENTELLRKLKQVQDNAWMLFNELPPCGARTRALHVFLDAKELTARLEMPQPPLADNADYR*
Ga0137397_110239921	3300012685	Vadose Zone Soil	VQNAELLRKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLPLLDDAGHR*
Ga0137394_107015322	3300012922	Vadose Zone Soil	VATVASNAELLRKLKQVEDNAWMLFNELPPCVARTRALHVFLDAKDLKSRLESLPGLLDHAGNG*
Ga0137394_114832213	3300012922	Vadose Zone Soil	LLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLAEFGDGALTP*
Ga0137419_100703536	3300012925	Vadose Zone Soil	VESAELLRQLKQVEDNAWMLFSELPPCGARTRALQVFLDAKELKARLESVPSLLDHADNR
Ga0137419_115703311	3300012925	Vadose Zone Soil	KLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLAEFGDGALTP*
Ga0137416_103079421	3300012927	Vadose Zone Soil	VPNAELLQKLKQVEDNAWLLFSELPPSVARTRALHVYLDAKELKSRLAENLALLDHAGNR
Ga0137416_115714821	3300012927	Vadose Zone Soil	PGVQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLPLLDDAGHR*
Ga0157378_131638681	3300013297	Miscanthus Rhizosphere	MLPTARDAELLQKLKQVEENAWLLFSELPPCVARTRALHVFLDAKDLKVRLE
Ga0134081_101708771	3300014150	Grasslands Soil	MQDAELLQNLKQVEENAWLLFSELPPSGACTRALHVFLDAKDLKARLERLAPLLDQPGHR
Ga0167657_10010069	3300015079	Glacier Forefield Soil	VENVEIFQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSRLEKLTTTESPQ*
Ga0167657_10321362	3300015079	Glacier Forefield Soil	VPNAELLQKLKQVEDNAWMLFSELPPCGARTRALHVFLDAKDITARLEKINRDRPHLPELHEG*
Ga0137418_107438871	3300015241	Vadose Zone Soil	VQNAELLRKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLAEFGDGALTP
Ga0132258_104358266	3300015371	Arabidopsis Rhizosphere	VENADLLRKLKQVEVNAWMLFNELPPCGARTRALHVFLDAKELTSRLERLPEPLSDKADHR*
Ga0132256_1032193581	3300015372	Arabidopsis Rhizosphere	VENPEIFQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKSRLEKLQQNSV
Ga0134083_103316371	3300017659	Grasslands Soil	MQNAELLRKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR
Ga0187774_105406232	3300018089	Tropical Peatland	MQDAELLQKLKQVETNAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAALLDQTGDG
Ga0066655_107598602	3300018431	Grasslands Soil	MQDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLLDQPPHR
Ga0066662_113365712	3300018468	Grasslands Soil	MQDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLLDQPGHR
Ga0066669_107848931	3300018482	Grasslands Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLENLAPPLPTESPR
Ga0066669_118239552	3300018482	Grasslands Soil	MQDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLVDQPGHR
Ga0206356_105183871	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VQNTELLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSRLEQLRESL
Ga0196964_105294091	3300020202	Soil	VESIDLLQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKARLEQLQLLNQ
Ga0196963_105082021	3300020215	Soil	VGNADLLQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSQIEQLQAEKAQP
Ga0213880_100682323	3300021953	Exposed Rock	VVVENIEILRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKARLEKLQSLAATESPQ
Ga0207692_103402162	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MENVEIFQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKDLKARLEKLNSVTESPQ
Ga0207707_100055778	3300025912	Corn Rhizosphere	VQNTELLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSRLEQLPEALPDKADH
Ga0207652_110198783	3300025921	Corn Rhizosphere	RKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSRLEQLPEALPDKADHR
Ga0207646_103309174	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VQNAELLQKLKQVEDNAWLLFSELPPCVARTRALHVYLDAKELKSRFEQLESLLDHADHR
Ga0207670_108716053	3300025936	Switchgrass Rhizosphere	VENAELLRKLKQVQDNAWMVFNELPPCGARNRALHVFLDAKELSARLEESLP
Ga0207665_100879342	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPPSSSDAELLQKLKQVEENAWLIFSELPPSGARTRALHVFLDAKDLKARLERFAALLEESGHR
Ga0209240_11116651	3300026304	Grasslands Soil	NAELLQKLKQVEDNAWLLFSELPPSVARTRALHVYLDAKELKSRLKENLELLDHAGNR
Ga0209154_12678783	3300026317	Soil	QKLKQVEENAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLLDQPGHR
Ga0209801_10891213	3300026326	Soil	VENAQLLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLAEKLNSVLSA
Ga0209802_11699732	3300026328	Soil	MGNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKARLESLPLLDNAGNR
Ga0209808_10897894	3300026523	Soil	MQDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLARLAPLLDQP
Ga0209161_104606092	3300026548	Soil	VENAQLLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLAEKLNSVLST
Ga0209474_103104012	3300026550	Soil	LQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLARLAPLLDQPPHR
Ga0209474_106110923	3300026550	Soil	FGSVRAMPPLSSDAELLQKLKQVEENAWLIFSELPPSGARTRALHVFLDAKDLKARLERFAALLQQPGHR
Ga0209689_11942171	3300027748	Soil	MQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELKSRLENLAPPLPTELPR
Ga0137415_100921702	3300028536	Vadose Zone Soil	VQNAELLQKLKQVEDNAWMLFSELPPCVARTRALHVYLDAKELKSRLESLPLLDDAGHR
Ga0137415_100969762	3300028536	Vadose Zone Soil	MPQLTRDAELLQKLKQVEDNAWLLFSELPPSGARTRALHVFLDAKDLKARLERLAPLRDQPGHR
Ga0137415_102815513	3300028536	Vadose Zone Soil	VESAELLRKLKQVEDNAWMLFSELPPCGARTRALQVFLDAKELKARLESVPSLLDHADNR
Ga0268241_100783533	3300030511	Soil	VENTDLLRKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELKSRLEQL
Ga0307408_1021196682	3300031548	Rhizosphere	MAAARVRVCYVASVENADLLQKLKQVEDNAWMLFSELPPCGARTRALHVFLDAKDLKARLEKLGPLADQTAHR
Ga0307469_102188152	3300031720	Hardwood Forest Soil	VESTELLRKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELTARFEHLQKQDSVLST
Ga0307468_1001045513	3300031740	Hardwood Forest Soil	VRVQDGEILQKLKQVEDNAWMLFSELPPCVARTRALHVFLDAKELTARFEHLQKQDSVLS
Ga0307473_103067622	3300031820	Hardwood Forest Soil	VRVQDGEILQKLKQVEDNAWMLFNELPPCVARNRALHVFLDAKELKSRLEKLQQEPTVTESPQ
Ga0307470_104268332	3300032174	Hardwood Forest Soil	VVVSQNIEILQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELQSRLEKLAATESRQ
Ga0307471_1000403946	3300032180	Hardwood Forest Soil	MQDAELLQKLKQVEENAWLIFSELPPSGARIRALHVFLDAKDLKQRLERLAALLDQPRHG
Ga0307472_1009611911	3300032205	Hardwood Forest Soil	MQDAELLQKLKQVEDNAWLIFSELPPSGARTRALHVFLDAKDLKQRLERLAALLDQPRHG
Ga0307472_1022952152	3300032205	Hardwood Forest Soil	VVISQNIEILQKLKQVEDNAWMLFNELPPCGARTRALHVFLDAKELQSRLEKLAATESRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049853

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences