NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049837

Metagenome / Metatranscriptome Family F049837

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049837
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 89 residues
Representative Sequence MIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVDPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIARTVGWF
Number of Associated Samples 109
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 45.52 %
% of genes near scaffold ends (potentially truncated) 35.62 %
% of genes from short scaffolds (< 2000 bps) 69.86 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.397 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(16.438 % of family members)
Environment Ontology (ENVO) Unclassified
(26.712 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.164 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.72%    β-sheet: 0.00%    Coil/Unstructured: 36.28%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVDPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIARTVGWFCytopl.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
77.4%22.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Sediment
Iron-Sulfur Acid Spring
Watersheds
Soil
Surface Soil
Peatlands Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Bog Forest Soil
Thawing Permafrost
Palsa
Permafrost
Forest Soil
Soil
Soil
Palsa
Peat
Plant Litter
Rhizosphere
7.5%4.8%10.3%8.9%5.5%16.4%11.0%5.5%6.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1000369143300000567Peatlands SoilLIPFFLYLVAGAVTGFHIYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF*
JGI12664J13189_100053223300001082Forest SoilMLPFCLYFVAGLITAFHVYTLVALAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK*
JGI12635J15846_1004915953300001593Forest SoilMLPFCLYFVAGLITAFHVYTLVVLAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK*
JGI26339J46600_1002979523300003218Bog Forest SoilMIPFFLYLAAGAVTGFHVYTLLTLAVLGSPVNPLELVSLAGSLGLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF*
JGIcombinedJ51221_1002617113300003505Forest SoilMIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSXLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWC
Ga0062386_10038367313300004152Bog Forest SoilMIPFFLYLAAGVVTGYHVVALVMVLGVPVYPFEIISLLGSLGLVVAAYVSLFNPHTAARLALLAALAIWCFYGPAIVHTAGLL*
Ga0073909_1040009823300005526Surface SoilMLPFLLYFVTGLVTGYHVYTLMFAAYGAPTSPLEFISLLGSFCLVIAAYLSLFKPYAASRVALLAALAIWCFYGPAIAGRVRTRR
Ga0070741_10007225193300005529Surface SoilVSSGSGSIDVIMVDMFPFFLYFAASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLQPK*
Ga0070730_1000666943300005537Surface SoilMLPFAIYFIAGTVTGFHVYTLLSLAVYGAPFNPLEFVSLLGSFGLLIAAYVSLFRPNAGARIALIAALTVWCFYGPAVARILRTRHGTQTKISRGFSRPTAPGVELG*
Ga0070733_1006173043300005541Surface SoilVSSGSGSVDVIMIDMFPFFLYFAASLITAFHVFTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAARLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLKPK*
Ga0070733_1020542633300005541Surface SoilMFPFCIYFVAGVITGFHVYTLLALTVYGVPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAMWCFYGPAIAKSVQPKPGGQSSVLWVGRWSSIRKA*
Ga0070733_1032972423300005541Surface SoilMRSNRWSGAIIFHMLPFFLYFVSGLVTGFHVYTLLALAVYGVPINPLEFVSLLGSLCLLIAAYVSLFKPHAAAKLALIAALAMWSFYGPAIA
Ga0070762_1070097323300005602SoilMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPAAVSPYMLPLSDGGPVISLLDDVRF*
Ga0070763_1026236923300005610SoilMLPFVLYLAAGVITGFQVYTLLMLAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSRLAPH*
Ga0070766_1007177913300005921SoilMIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSFLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKSIRTKLT
Ga0070766_1008693313300005921SoilMLPFLLYFVAGVITGFHIYTLLALTVYGAPFNPLELVSLLGSLGLLIAAYVSLYKPHAAARIALLAALMTWSFYGPAIAKSLRT
Ga0070766_1029701123300005921SoilMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHL
Ga0075029_10000416253300006052WatershedsMLPFVLYFTCAVVTGFHIYTLLALAVYGAPFNPLELLALLGSLALMIAAYMSLFRPYAAARVALIAALALWSFYAPAIARMVRTRIGTSTSTLSIGIYQASGIGS*
Ga0075029_10046159413300006052WatershedsMNANRKSICFAGGIIVDMFPFCLYFLASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYSPAIAKSFRSKLGGQS
Ga0075017_10014323133300006059WatershedsMNANRKSICFAGGIIVDMFPFCLYFLASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAIAKSFRSKLGGQSSVLEPK*
Ga0075017_10038917023300006059WatershedsVSSGSGSIDVIMVDMFPFFLYFAASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLKPK*
Ga0075030_10007046323300006162WatershedsMNANRKSICFAGGIIVDMFPFCLYFLASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYSPAIAKSFRSKLGGQSSVLEPK*
Ga0075030_10025368033300006162WatershedsMLPFLLYFATAVVTGCHLYTLLALAVYGAPFNPLELVSIFGSLCLLIAAYVSLFKPYAAARLALVAALAIWCFYGPAIAKIVRTRLAPATAVSYEGARL*
Ga0075014_10026203623300006174WatershedsMIVEMLPFFLYFVASLITGFHVCILLALAAHGTPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVAKSIRPKLGVLSSVLEPR*
Ga0075014_10046667423300006174WatershedsMVDMFPFFLYFASSVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSIRPKLGGQSSVLEPK*
Ga0116222_141414613300009521Peatlands SoilMTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALARAVGRL*
Ga0116222_144193013300009521Peatlands SoilMIPFFLYLAAGAATGFHVYTLLMLAVLGAPVDPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRAADWF*
Ga0116220_1058957623300009525Peatlands SoilMIPFSLYLAAGAATGFHVYTLLTLAVLGAPVDPLELVSLVGSLCLLAAAYLSLFKPHAAARLALLASLAIWCFYGPAIARTVGWF*
Ga0116133_102434033300009623PeatlandVIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPAIARTVGWF*
Ga0116112_118205913300009636PeatlandMIPFFLYLAAGAVTGFHVCTLLMLAVLGSPVNPLELVSLAGSLCLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIARTVGWF*
Ga0116110_1002952103300009643PeatlandLIPFFLYLVVGAVTGFHVYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF*
Ga0116110_110640323300009643PeatlandMIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVSPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLAALAIWCFYGPAIARTVGWF*
Ga0116215_138312923300009672Peatlands SoilMFPFLLYFITAVVTGFHIYTLLSLVVLGVPINPLEVVALLGSLCLLIAAYISLFKPHAAARLALVATLAIWSFYGP
Ga0116219_1001852843300009824Peatlands SoilMTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALARAVVRL*
Ga0116223_1072364623300009839Peatlands SoilMIPFFLYLAAGAATGFHVYTLLMLAVLGGPVDPLELVSLAGSLCLLVAAYLSLFKPHPAAKLALVASLAIWCFYGPAIVRTIGWFGT*
Ga0074046_1003353523300010339Bog Forest SoilMIPFFLYLAAGAVTGFHVYTLLILGVLGSPVNPLELVSLAGSLGLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF*
Ga0074045_1046074123300010341Bog Forest SoilMIPFFLYLAAGAVTGFQVYALLVLAVLGCPVNPLEFVSLAGSLCLIVAAYLSLFKPHAAARLAWLASLAIWCFYGPAIARTIRWF*
Ga0074044_1013663333300010343Bog Forest SoilMIPFFLYLAAGVVTGYHVVALVMVLGVPVYPFEIISLLGSLGLVVAAYVSLFNPHTAARLALLAALAIWCVYGPAIVHTAGLL*
Ga0136449_10017166713300010379Peatlands SoilMKTRKKKQSSFTNMIPFFLYLAAGAVTGFHVYTLLMLAVLGVPVNPLEFVSLAGSLGLFIAAYLSLFKPNAAARLALLAALAIWCFYGPAIVRAADWF*
Ga0136449_10048383033300010379Peatlands SoilMIVEMLPFFLYFVASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAVAKSIRPRVGVQSSARELR*
Ga0136449_10099939723300010379Peatlands SoilVLPFVLYSVTGVVTGFHLYTLLALVVYGAPFDPLELVALSGSFGLLMAAYVSLFRPHAGAKLALVAALATWCFYGPAIAKVVRTRLDRQVQSRSSPSGSPRSTTMSSQ*
Ga0136449_10107426723300010379Peatlands SoilMLPFFLYLITGVVTGFHVYALLSFSVYTGAINPLELVSLLGSFCLLIAAYLSLFRPPAAGRLALIACLLMWCFYGPAIANLVRARL*
Ga0136449_10121505823300010379Peatlands SoilMLPFFLYLVAGAVTGCHVYTLLMLAMLGAPVDPLELVSMAGSLCLLVAAYLSLFKPRAAAKLALLASLAIRCFYSPAMVHAAGWF*
Ga0136449_10404686923300010379Peatlands SoilCLYFAASVITGFHVYTLLALAVYGAPYNPQELISLLGSLCLLVAAYLSLSKPYVAARLALLACLTIWCFYGPAIAKSIRGL*
Ga0136449_10439032523300010379Peatlands SoilMFPFCLYFVTSVITGFHVYTLLALAIYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALITCLAIWCFYGPAIAKSIRPTLGGQSSVLKLK*
Ga0137776_126644313300010937SedimentMLPFLLYFAAGAATGYHIYTLLLFAVQGAPFNPLELVALLGSLCLFVAAYLSLFRPYAAGRLALVACLAIWCFYGPAI
Ga0181521_1058846913300014158BogVIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPA
Ga0181538_1026873823300014162BogMVPFFLYLAAGAATGFHVLTLLMLAALGVPVDTLEFVSLAGSLGLFVAAYLSLFKPNAAARLALPAALAIWCFYGPAIARTIGRF*
Ga0181526_1029485513300014200BogMIPFFLYLAAGAVTGFHIYTLLMLAVLGVPADPRELISLLGSLCLIVAAYLSLFNPHAAARLALLASLAIWCFY
Ga0182018_1000402863300014489PalsaMLPFFLYFVAGVITGFHVYTLLSMTRYGIAFNPLELVSLLGSLGLLIAATISLFKPYAAAKVALLACLLIWSLYGPAIANFVRTGV*
Ga0182024_10000260903300014501PermafrostMIPFVLYFAAGVMSGYHVYTLLTLAVVGAPFDPLEFVSLAGSLALIVAAYWSLFRPHAAAKLALLASLATWCFYGPAIAHSLSRL*
Ga0182024_10002441143300014501PermafrostMFPFCLYFVVSVVTGFQVYTLLVLTAYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAIAKSVRPKLGE*
Ga0182024_1009866233300014501PermafrostMLPFFLYLITAVLTGFHVYTLLTLTLLGAPVNPLELVSLLGSLALLIAAYISLFSPYIAARVALLACLAMWSFYAPAIAKSIRSGGGK
Ga0182024_1049044813300014501PermafrostMIVDMLPFCLYFVAGIVTGFHVYTLALAMYGARLNPLELVSLLGSLCLLIAAYVSLSKPKAAAKIALLASLMIWCFYGPAIAKSVRTKLDKPSSVVFRSGSVSFARTPEGA*
Ga0181511_138590113300016702PeatlandMLPFCLYFVAAMITGFNVYTLLAMTLYGVPFNPLEFVSLLGSLCLMIAAFISLFRPYVAARVALVASLLIWSFYGPA
Ga0181505_1015774023300016750PeatlandMVPFFLYLAAGAATGFHVLTLLMLAALGVPVDTLEFVSLAGSLGLFVAAYLSLFKPNAAARLALPAALAIWCFYGPAIARTIGRF
Ga0181505_1030805813300016750PeatlandMIPFFLYLAAGAVTGFHIYTLLMLAVLGVPADPRELISLLGSLCLIVAAYLSLFNPHAAARLALLASLAIWCSYSPAIVRAAGWF
Ga0187818_1000035283300017823Freshwater SedimentMIPFFLYLAAGAVTGFHVYTLLMLAVLGSPVNPLELVSLAGSLCLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF
Ga0187818_1002580343300017823Freshwater SedimentAGAVTGFHVYTLLRLTILGSPVNPLQLVSLAGSLCLLVAAYLSLFKPEAAAKLSLLASLTIWCFYGPAIARTIGWF
Ga0187818_1019921123300017823Freshwater SedimentMIPFLLYLAAGVVTGFHVYTLLMLAVLGAPVNPLELVSLLGSLGLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALAHAITRL
Ga0187820_125251623300017924Freshwater SedimentMLPFCLYLIAALITAFHVCTLIALALYGAAAVNPLELVSLLGSLVLLIAAYVSLFKPRAGARVALLACLAIWCFYGPAIVKLF
Ga0187849_105684023300017929PeatlandLIPFFLYLVVGAVTGFHVYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0187801_1025067923300017933Freshwater SedimentGMIPFFLYLAAGAVTGFHVYTLLMLAVLGSPVNPLELVSLAGSLCLLVAAYLSLFKPHAAAKLALLASLTIWCFYGPAIAHTVGWF
Ga0187801_1027420113300017933Freshwater SedimentMLPFCLYFGAGVITGFHVYTLISMVVYGTPINPLEIGSLLGSLCLVIAAYVSLFKPYAAARLALLASLLIWGFYGPAIAK
Ga0187803_1002311723300017934Freshwater SedimentMAPFFLYFAAGAVTGFHVYTLLRLTVLGSPVNPLELISLAGSLCLLVAAYLSLFKPDAAAKLALLAALTLWCFYGPAIARTIGWF
Ga0187848_1014813823300017935PeatlandVIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPAIARTVGWF
Ga0187821_1042832113300017936Freshwater SedimentVLAMLPFLLYFVTGVVTGYHVYALMFAAYGAPTSPLELVSLLGSFSLVIAAYLSLFKPYAASRVALLAALAIWCFYGPAIAGRVRT
Ga0187808_1034986423300017942Freshwater SedimentMAPFFLYLAAGAVTGFHVYTLLRLTVLGSPVNPLELFSLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGP
Ga0187819_1002734233300017943Freshwater SedimentMAPFFVYLAAGAVTGFHVYTLLRLTALGSPVNPLELFSLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGPAIARTIGWF
Ga0187879_1001191633300017946PeatlandMIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVSPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLAALAIWCFYGPAIARTVGWF
Ga0187817_1009507823300017955Freshwater SedimentMAPFFLYLAAGAVTGFHVYTLLRLTVLGSPVNPLELFSLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGPAIARTIGWF
Ga0187823_1032829813300017993Freshwater SedimentMLPFLLYFVTGLVTGYHVYTLMFAAYGAPTSPLELVSLLGSFSLVIAAYLSLFKPYAASRVALLAALAIWCFYGPAIAGRCEHVGSRLR
Ga0187815_1019654713300018001Freshwater SedimentMAPFFLYFAAGAVTGFHVYTLLRLTVLGSPVNPLELISLAGSLCLLVAAYLSLFKPEAAAKLALLASLTIWCFYGPAIARTIGWF
Ga0187868_130707613300018002PeatlandLIPFFLYLAAGAVTGFHVYILLMLAALGAPVNPLELVSLAGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0187804_1052159223300018006Freshwater SedimentRWAECYRLRSKHLNMAPFFLYLAAGAVTGFHVYTLLRLTVLGSPVNPLELISLAGSLCLLVAAYLSLFKPDAAAKLALLAALTLWCFYGPAIARTIGWF
Ga0187810_1003092923300018012Freshwater SedimentMIPFLLYLAAGVVTGFHVYTLLMLAVLGAPVNPLELVSLLGSLGLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALAHTITRL
Ga0187866_101599953300018015PeatlandLIPFFLYLVVGAVTGFHVYILLMLAALGAPVDLLEFVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0187874_1038607013300018019PeatlandVIPFFLYVAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFYGPAIARTVGWF
Ga0187863_1031165323300018034PeatlandMLPFFLYFVAGVITGFHVYTSLSMTRYGIAFNPLELVSLLGSLGLLIAATISLFKPYAAAKVALLACLLIWSLYGPAIANFVRTGV
Ga0187863_1090737613300018034PeatlandVIPFFLYLAAGVATGFHVYTLLMLAVVGAPVDLLEFVSLAGSLGLLVAAYLSLFKPNAAARLALPASLAIWCFY
Ga0210407_1014607823300020579SoilMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPA
Ga0210403_1032400733300020580SoilIMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAAYLSLFKPHAAARLALVAALAMWCFYGPALANRVRAHLGRPAAVSPYMLPLSDGAPGISLLDDVRF
Ga0210403_1099649523300020580SoilVASVITGFHVYTLLALAVYGAPANPLELVSLLGSLCLLVAAYVSLFKPNAAARLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLQPK
Ga0210399_1001732133300020581SoilMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLGRPAAVSPYMLPLSEGGPVISLLDDVRF
Ga0210395_1001239463300020582SoilMIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSFLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKS
Ga0210395_1007044723300020582SoilMLPFVLYLAAGVITGFQVYTLLMLAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSRLAPH
Ga0210395_1024112333300020582SoilMLPFFLYFAASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAVAKSIRPRVGVQSAARELR
Ga0210405_1087652913300021171SoilMIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSFLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKSIRTKL
Ga0210396_1020742523300021180SoilMLPFFLYFAASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYTAARLALIACLAIWCFYGPAVAKSIRPRVGVQSSARELR
Ga0210397_1000373883300021403SoilMLPFFLYFVASLITGFHVCMLLALSAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACLAIWSFYGPAVAKSIRPKLVVQSSVLEPR
Ga0210387_1079299123300021405SoilMLPFVLYFVTGAATSFHVCMLLFAAYGEPVNPLELVSLLGSVCLLVAAYLSLFRAHAAARLALIACLLMWCFYAPAIANFVRARWH
Ga0210394_1156617913300021420SoilMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPAAVS
Ga0210391_1015453423300021433SoilMLPFVLYLAAGVITGFQVYTLLILAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSRLAPH
Ga0210398_1062867213300021477SoilMIFYMLPFFLYFATGLITGLNVYTLLALAAYGVPFNPLELVSLLGSLCLLIAAYVSLVKPRVAARLALLASLTIWSFYGPAIAKSIRTKADIRSSVFRD
Ga0210410_1041141123300021479SoilMLPFFLYFAAGVITGFHVYTLLALTVYGAPFNSLELVSLLGSVGLLMAAFIGLFKPYAAARIAFIACLMTWSFYGPAIA
Ga0212123_1056316723300022557Iron-Sulfur Acid SpringMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLRRPAAVSPYMLPLSDGGPVISLLDDVRF
Ga0212123_1057202423300022557Iron-Sulfur Acid SpringMIFCMLPFCLYFVAGVVTGFHVCTLLALAVYGIPFNPLELTSLFGSLCLLVAAFVSLFKPYMAGRLALLACLAIWGFYGPATA
Ga0212123_1067068613300022557Iron-Sulfur Acid SpringMLPFVLYFVTAVVTGFHVYTLLSFAVYGVPVNLLELLSLLGSFCLLIAAYISLFRPHAAARLALLACLVIWSFYAPAIAKIVRTR
Ga0224545_100062633300022881SoilMIPFVLYFAAGVMSGYHVYTLLTLAVVGAPFDPLEFVSLAGSLALIVAAYWSLFRPHAAAKLALLASLATWCFYGPAIAHSLSRL
Ga0247668_107906923300024331SoilMLPFFLYFVTGIVTGFHVYTLLSLSVYGAPFNPLELVSLLGSLGLVIAACLSLFRPFAAGRLALVAALAIWCFYGPAVAK
Ga0208036_106050213300025419PeatlandMLPFCLYFVTGIITGFHVYTLMLLSLYGVPINPLEFVSLLGSLCLLIAAYLSLFNPRAAAKVALLASLLIWCFYAPALAKSIR
Ga0208692_106714723300025472PeatlandVGAVTGFHVYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0208191_100172463300025496PeatlandMLPFCLYFVTGIITGFHVYTLMLLSLYGVPINPLEFVSLLGSLCLLIAAYQSLFNPRAAAKVALLASLLIWCFYAPALAKSIRTRLDKHSSV
Ga0208237_104164323300027080Forest SoilMIVDMLPFCLYFVAGIVTGFNVYTLALAVYGARLNPLELVSLLGSLCLLIAAYVSLSKPNAAAKLALLASLMIWCFYGPAIAKSVRTKLTKHSSVLSDLDLFS
Ga0209010_1000258113300027370Forest SoilMLPFCLYFVAGLITAFHVYTLVALAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK
Ga0208199_113330323300027497Peatlands SoilMFPFLLYFITAVVTGFHIYTLLSLVVLGVPINPLEVVALLGSLCLLIAAYISLFKPHAAARLALVATLAIWSFYGPAIANAVRTRL
Ga0208044_101793223300027625Peatlands SoilMTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCFYGPALARAVGRL
Ga0209420_106375413300027648Forest SoilMLPFCLYFVAGLITGFHIYTLLALAAYGVPINPLELLSFLGSLSLIIAAYISLFKPYAAARVALVACLVMWSFYAPAIVRSLHTFTK
Ga0209908_1001885123300027745Thawing PermafrostMLPFFLYFVAGVITGFHVYTLLSMTRYGIAFNPLELVSLLGSLGLLIAATISLFKPYAAAKVALLACLLIWSLYGPAIANFVRTGV
Ga0209039_1035331213300027825Bog Forest SoilMIPFFLYLAAGAVTGFHVYTLLTLAVLGSPVNPLELVSLAGSLGLLVAAYLSLFKPHAAAKLALLASL
Ga0209274_1008571413300027853SoilMIVDMLPFCLYFVAGIVTGFNVYTLALAMYGARLNPLELVSLMGSLCLLIAAYVSLSKPSAAAKIALLASLMIWCFYGPAIAKSVRTKLAKQSSVF
Ga0209517_1062376823300027854Peatlands SoilMIPFFLYLAAGAATGFHVYTLLMLAVLGGPVDPLELVSLAGSLCLLVAAYLSLFKPHPAAKLALVASLAIWCFYGPAIVRTIGWFGT
Ga0209166_1004435833300027857Surface SoilMLPFAIYFIAGTVTGFHVYTLLSLAVYGAPFNPLEFVSLLGSFGLLIAAYVSLFRPNAGARIALIAALTVWCFYGPAVARILRTRHGTQTKISRGFSRPTAPGVELG
Ga0209167_1007638833300027867Surface SoilMIDMFPFFLYFAASLITAFHVFTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAARLALIACLAIWCFYGPAIAKSVQAKLGGQSSVLQPK
Ga0209275_1037199323300027884SoilMLPFCLYFVAGLITAFHVYTLVVLAAYGVPINPLEFLSLLGSLSLVTAAYISLFKPYAAARIALVACLVMWSFYAPAIVRSLHAFAK
Ga0209380_1013773223300027889SoilMLPFILYLVAGVVTGLHVYTLMFAGFGIPFNPLELVSLLGSLCLLMAACLSLFKPYAAARLALVAALAMWCFYGPAIANRVRAHLGRPAAVSPYMLPLSDGGPVISLLDDVRF
Ga0209380_1085954723300027889SoilMLPFVLYFVTAVVTGFHVYTLLSFAVYGVPINLLELLSLLGSFCLLIAAYVSLFRPHAAARLALLACLVMWSFYAPAIAKIVRPACPRFTSAPA
Ga0209624_10000045683300027895Forest SoilMLPFALYLAAGVITGFHVYSLLILAVVGAPLDPLEFVSLAGSLGLVIAAYYSLVKPRVAAKLALLACLAIWCFYGPGIVGVVSGFAAH
Ga0209067_1001777423300027898WatershedsMLPFVLYFTCAVVTGFHIYTLLALAVYGAPFNPLELLALLGSLALMIAAYMSLFRPYAAARVALIAALALWSFYAPAIARMVRTRIGTSTSTLSIGIYQASGIGS
Ga0209067_1022211813300027898WatershedsMLPFCLYFVASVITGFHVYTLLVLTVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPYTAARLALIACLAIWCFYGPAIAKSIRPKLGGQSSVLLGRPLVKHQK
Ga0209067_1049363523300027898WatershedsMIVEMLPFFLYFVASLITGFHVCILLALAAHGTPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVAKSIRPKLGVLSSVLEPR
Ga0209415_1005853833300027905Peatlands SoilLIPFFLYLVAGAVTGFHIYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVCWF
Ga0209415_1021236033300027905Peatlands SoilMIPFFLYLAAGAATGFHVYTLLMLAVLGGPVDPLELVSLAGSLCLLVAAYLSLFKPHPAAKLALVASLAI
Ga0209698_1007084043300027911WatershedsVSSGSGSIDVIMVDMFPFFLYFAASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAYVSLFKPNAAAKLALIACLAIWCFYGPAIAKSVRPKLGGQSSVLQPK
Ga0209698_1089553413300027911WatershedsMLPFLLYFATAVVTGCHLYTLLALAVYGAPFNPLELVSIFGSLCLLIAAYVSLFKPYAAARLALVAALAIWCFYGPAIAKIVRTRLAPATAVSYEGARL
Ga0209526_1088075913300028047Forest SoilMTAEKIICARRLRYSMLPFVLYFVTAVVTGFHVYMLLSFVVYGVPINPLELFALLGSFCLLIAAYLSLFRPRAAGRLALLACLAMWCFYAPA
Ga0302224_1016343123300028759PalsaVIAGFVGMYGFDMLPFFLYLVAGAITGFHVYSLLALTVLGAPSHPLEFVSLLGSLGLVVAAYLSLFKPHAAARLALLASLAIWLFYGPAIARAVETRLHK
Ga0265338_1001498943300028800RhizosphereMLPFILYVVTGVVTGLHVYTLMFAGFGMPFNPLELISLLGSLCLLLAAYLSLFKPDAAARLALVAALAMWCFYGSALANRVRAHFGRTAAASQYIHALSDAAPGPLLLESVRF
Ga0246001_100132413300029889PeatMLPFCLYFVTGIITGFHVYTLMLLSLYGVPINPLEFVSLLGSLCLLIAAYLSLFNPRAAAKVALLASLLIWCFYAPALAKSIRTRLDKHSSV
Ga0316363_1001414633300030659Peatlands SoilLIPFFLYLVAGAVTGFHIYILLMLAALGAPVDPLELVSLVGSLCLIIAAYLSLFKPHAAARLALLASLAIWCFYGPAIVRTVGWF
Ga0310039_1024696613300030706Peatlands SoilMTPFLLYLAAGAATGFHVYTLLMLAVVGAPVNPLELVSLLGSLCLLVAAYWSVFNPHAAARLALVAALAMWCF
Ga0170834_10988216323300031057Forest SoilMIVEMPPFLLYFVASVITGFHVGMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVAKSIRPKLGVQSSVLEPR
Ga0170823_1572211413300031128Forest SoilMIVEMLPFFLYFVASLITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPHAAARLALIACLAIWCFYGPAVA
Ga0302325_1153444213300031234PalsaMLPFCLYFVAGLITGFHVYTLLALAAYGVPVSPLELLSFLGSLSLIIAAYISLFKPYAAARVALLACLVMWSFYAPAILRSLHR
Ga0310686_11075765733300031708SoilMIPFVLYFAGGVVSGFHVYTLLTLAVVGAPFDPLEFVSLAGSLALIVAAYWSLFNPHAAAKLALLASLATWCFYGPAISHALSRR
Ga0310686_11318422233300031708SoilMIPFVLYLAAAVITGFHVYTLLALAVVGAPYDPLELVSLAGSLALVVAAYWSLAKPHAAAKLALLACLAMWCFYSPAIARTMSQFAVR
Ga0307476_1022994533300031715Hardwood Forest SoilMIPFVLYLAAGVITGFHVYTLLALAVVGAPYDPLELVSLVGSLALVVAAYWSLVKPHAAAKLALLACLAIWCFYGPAIARTVSRFAVR
Ga0307478_1133187413300031823Hardwood Forest SoilMLTGFHVYTLLTLAVFGVPFNLLHLISLFGSFCLLIAAYVSLFKPRAAAKIALLACLLIWCFYAPATAAL
Ga0311301_1021590813300032160Peatlands SoilMIPFFLYLAAGAVTGFHVYTLLMLAVLGVPVNPLEFVSLAGSLGLFIAAYLSLFKPNAAARLALLAALAIWCFYGPAIVRAADWF
Ga0311301_1100881223300032160Peatlands SoilMIPFFLYLAAGAVTGFHVYTLLMLAVLGAPVDPLELVSLVGSLCLIVAAYLSLFKPHAAARLALLASLAIWCFYGPAIARTVGWF
Ga0311301_1114084013300032160Peatlands SoilMIVEMLPFFLYFVASVITGFHVCMLLALAAHGAPSNPLELVSLLGSLCLLIAAYVSLFKPYAAARLALIACL
Ga0348332_1217719213300032515Plant LitterMLPFLLYFVAGVITGFHVYTLLALTVYGVPFNPLELVALLGSLCLLIAAYVSLFKPFAAARLALLACLALWCFYGPAIAKSIRTKHD
Ga0335085_1028583033300032770SoilMFPFCLYFVASVITGFHVYTLLALAVYGAPSNPLELVSLLGSLCLLIAAFVSLFKPNAAAKLALIACLAIWCFYGPAIAKSIRPKLGGQSSVLELK
Ga0335078_1100543013300032805SoilMLPFVLYFVTAVVTGYHVYTLLSLAVYGAPFNPLELVSIFGSFCLLIAAYLSLFRPYAAARLALIAALAIWCFYGPAIAKIVRTRLAPQTAVLSESARS
Ga0335081_1039511013300032892SoilTGFHVYTLLMLAVLGAPANPLELVSLLGSLCLLVAAYWSIFNPHAAARLALVAALAMWCFYGPALAHAIGRL
Ga0334792_010858_3_2453300033888SoilMLPFCLYFVASVITGFHVYALLAPAVYGAPWNPLELVSLLGSLGLLIAAYVSLFKPYAAARLALIACLAIWCFYGPAIANS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.