Metagenome / Metatranscriptome Family F049813

Basic Information
Family ID	F049813
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	51 residues
Representative Sequence	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPRMKVQ
Number of Associated Samples	111
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.51 %
% of genes near scaffold ends (potentially truncated)	93.15 %
% of genes from short scaffolds (< 2000 bps)	95.21 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (88.356 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.137 % of family members)
Environment Ontology (ENVO)	Unclassified (43.151 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.151 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. 1INPhiseqgaiiFebDRAFT_1002284562 2JGI1027J11758_125559453 3JGI1027J12803_1022429861 4C688J35102_1186617761 5Ga0066672_108627621 6Ga0066680_109407562 7Ga0066685_103265642 8Ga0066678_106301062 9Ga0066671_109211501 10Ga0065704_102687581 11Ga0065715_110251132 12Ga0065705_107352051 13Ga0070676_106014292 14Ga0070671_1005837671 15Ga0070671_1015000242 16Ga0066689_105536022 17Ga0066682_104483652 18Ga0070707_1009686231 19Ga0066697_103578352 20Ga0066700_102123791 21Ga0066700_103516552 22Ga0066670_104732223 23Ga0066694_101498231 24Ga0066708_107997861 25Ga0066691_104153832 26Ga0066691_105222882 27Ga0070717_120973081 28Ga0066652_1003698652 29Ga0066652_1009094812 30Ga0070712_1004035352 31Ga0066665_101050684 32Ga0066665_113541052 33Ga0066660_105639653 34Ga0066660_111647862 35Ga0099791_100486003 36Ga0099791_102147691 37Ga0099793_103288753 38Ga0099793_106351011 39Ga0066710_1004359063 40Ga0066710_1046409302 41Ga0099829_107329021 42Ga0066709_1044988531 43Ga0099792_109237141 44Ga0105249_104792053 45Ga0134065_104693332 46Ga0134125_112368421 47Ga0134128_105459433 48Ga0134122_114859641 49Ga0137392_110900091 50Ga0137364_102443101 51Ga0137364_102559863 52Ga0137382_103927151 53Ga0137382_104479903 54Ga0137365_100967584 55Ga0137363_102095292 56Ga0137399_109612432 57Ga0137399_110764881 58Ga0137362_102361443 59Ga0137362_104849253 60Ga0137362_104896433 61Ga0137362_110792362 62Ga0137381_115298751 63Ga0137376_102715873 64Ga0137376_115432972 65Ga0137376_117791532 66Ga0137378_101148532 67Ga0137370_109470601 68Ga0137358_105715851 69Ga0137395_110934692 70Ga0137396_113174582 71Ga0137394_110073132 72Ga0137413_101779471 73Ga0137413_104361991 74Ga0137413_105812711 75Ga0137419_113553641 76Ga0137404_112213501 77Ga0137407_107854103 78Ga0164303_109614462 79Ga0164303_114185502 80Ga0164301_114715991 81Ga0164301_115834862 82Ga0164302_101563752 83Ga0164302_115720551 84Ga0164304_111441811 85Ga0157376_129009751 86Ga0137409_114924111 87Ga0137403_110296502 88Ga0134085_104369511 89Ga0132256_1038541752 90Ga0184618_102015721 91Ga0184618_102997812 92Ga0066655_103148282 93Ga0066667_112586452 94Ga0193744_10266641 95Ga0193707_10426711 96Ga0193713_11716581 97Ga0193713_12052001 98Ga0193718_10399442 99Ga0193755_12065551 100Ga0193749_10396701 101Ga0179594_100360671 102Ga0210407_110410113 103Ga0193709_10143591 104Ga0193709_10947231 105Ga0193750_10085296 106Ga0193750_10912512 107Ga0210392_100528233 108Ga0222622_100915621 109Ga0222622_105197191 110Ga0179589_103070252 111Ga0179589_105979561 112Ga0207657_102702961 113Ga0207646_109124083 114Ga0207700_117066851 115Ga0207706_101589034 116Ga0207704_104797652 117Ga0207704_119762583 118Ga0209238_11811782 119Ga0209470_11831401 120Ga0209267_10573331 121Ga0209806_10317621 122Ga0209805_13412711 123Ga0209805_13777852 124Ga0209161_102010011 125Ga0179587_106024772 126Ga0207603_1026301 127Ga0209329_10172121 128Ga0209076_11195222 129Ga0209328_101437742 130Ga0209488_104765712 131Ga0209488_105582081 132Ga0268264_123412392 133Ga0307305_104897421 134Ga0075374_107384702 135Ga0170834_1027829851 136Ga0170834_1065360841 137Ga0170824_1212008473 138Ga0170824_1288744581 139Ga0170820_141917672 140Ga0170819_157498354 141Ga0307477_102486583 142Ga0307475_106541433 143Ga0307475_107265141 144Ga0307473_111736381 145Ga0307471_1001325291 146Ga0307471_1009036051
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. 1INPhiseqgaiiFebDRAFT_1002284562 2JGI1027J11758_125559453 3JGI1027J12803_1022429861 4C688J35102_1186617761 5Ga0066680_109407562 6Ga0066671_109211501 7Ga0065704_102687581 8Ga0070671_1005837671 9Ga0070671_1015000242 10Ga0066689_105536022 11Ga0066700_102123791 12Ga0066708_107997861 13Ga0066652_1003698652 14Ga0066652_1009094812 15Ga0066665_113541052 16Ga0066710_1004359063 17Ga0099829_107329021 18Ga0066709_1044988531 19Ga0137362_110792362 20Ga0137381_115298751 21Ga0137376_115432972 22Ga0137378_101148532 23Ga0137413_101779471 24Ga0137404_112213501 25Ga0164304_111441811 26Ga0193713_11716581 27Ga0193750_10912512 28Ga0179589_103070252 29Ga0207646_109124083
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48 1Ga0137399_109612432 2C688J35102_1186617761 3Ga0066672_108627621 4Ga0066680_109407562 5Ga0066685_103265642 6Ga0066671_109211501 7Ga0070671_1015000242 8Ga0066682_104483652 9Ga0066700_103516552 10Ga0066670_104732223 11Ga0066708_107997861 12Ga0066691_105222882 13Ga0066652_1009094812 14Ga0066665_101050684 15Ga0099829_107329021 16Ga0105249_104792053 17Ga0137362_110792362 18Ga0137381_115298751 19Ga0137376_115432972 20Ga0137378_101148532 21Ga0137413_105812711 22Ga0137404_112213501 23Ga0164302_115720551 24Ga0137403_110296502 25Ga0066667_112586452 26Ga0193713_11716581 27Ga0193713_12052001 28Ga0193750_10912512 29Ga0179589_103070252 30Ga0179589_105979561 31Ga0209238_11811782 32Ga0179587_106024772 33Ga0209328_101437742 34Ga0170824_1212008473 35Ga0170819_157498354
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.89% β-sheet: 0.00% Coil/Unstructured: 67.11%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF07690	MFS_1	28.08
PF00085	Thioredoxin	21.92
PF00190	Cupin_1	10.96
PF16576	HlyD_D23	3.42
PF14833	NAD_binding_11	2.05
PF03479	PCC	1.37
PF03446	NAD_binding_2	1.37
PF03916	NrfD	0.68
PF07731	Cu-oxidase_2	0.68
PF00248	Aldo_ket_red	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1661	Predicted DNA-binding protein with PD1-like DNA-binding motif, PPC/DUF296 domain	General function prediction only [R]	1.37
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.36 %
Unclassified	root	N/A	11.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.36 %
Unclassified	root	N/A	11.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.36 %
Unclassified	root	N/A	11.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.37 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	41.10 %
Unclassified	root	N/A	11.64 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Unclassified	root	N/A	11.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	41.10 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.68 %
Unclassified	root	N/A	11.64 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	36.99 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Unclassified	root	N/A	11.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Unclassified	root	N/A	11.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.68 %
Unclassified	root	N/A	11.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.68 %
Unclassified	root	N/A	11.64 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.68 %
Unclassified	root	N/A	11.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100228456	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300000789\|JGI1027J11758_12555945	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300000955\|JGI1027J12803_102242986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	845	Open in IMG/M
3300002568\|C688J35102_118661776	Not Available	582	Open in IMG/M
3300005167\|Ga0066672_10862762	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005174\|Ga0066680_10940756	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005180\|Ga0066685_10326564	Not Available	1064	Open in IMG/M
3300005181\|Ga0066678_10630106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300005184\|Ga0066671_10921150	Not Available	553	Open in IMG/M
3300005289\|Ga0065704_10268758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M

Showing 1 to 10 of 146 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.10%
Host-Associated	Host-Associated	8.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.74%
Plants	Host-Associated → Plants	8.90%
Terrestrial	Environmental → Terrestrial	88.36%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.48%
Sediment	Environmental → Aquatic → Sediment	2.74%
Soil	Environmental → Terrestrial → Soil	88.36%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Loam	Environmental → Terrestrial → Soil → Loam	5.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.37%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.37%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.37%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.14%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M

Showing 1 to 10 of 111 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1002284562	3300000364	Soil	MIKVKHLSYALLLGGIAITAAYSQDTASEYVAPPDASPKGKAPGMKVQLLNP
JGI1027J11758_125559453	3300000789	Soil	MTALKQLTYALLLGGMTTATGYSQDTASEYVAPPDAGPKGKAP
JGI1027J12803_1022429861	3300000955	Soil	MTKIKQLSYALSLLGIAITTAYSQDTASEYVAPPDAGPKGKA
C688J35102_1186617761	3300002568	Soil	MFILKQLSYALVLVGLVVPRGGSQNTASEYVAPPDAGPKGTAPRMKVQLLNPGEGVKQYAVIF
Ga0066672_108627621	3300005167	Soil	MITVKQLTYALLLGGIATAAAYSQDTANEYVAPPDAGPKGKAPRMKVQLLN
Ga0066680_109407562	3300005174	Soil	MINMKKLNYALLLDGIAIATAYSQNKDSEYVAPPDAGPKARLRG*
Ga0066685_103265642	3300005180	Soil	MINMRQLSYALLLGGIAIATAYSQDKASEYVAPPDAGPKGKAPRMKVQLL
Ga0066678_106301062	3300005181	Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQ
Ga0066671_109211501	3300005184	Soil	MIKMKLLSYGLSFIAMAVTTAYSQDTAIEYVTPSEPVPKGTAPRMKVQLVNNGGERGKHY
Ga0065704_102687581	3300005289	Switchgrass Rhizosphere	MIKVKQLSYALLLGGIAIAAAYSQDTATEYAAPPDAGPKGKAPRMKVQPLNPGEPTKQYAVIF
Ga0065715_110251132	3300005293	Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKM
Ga0065705_107352051	3300005294	Switchgrass Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTAIEYVAPPDAGPKGKAPRMKVELLNPGEPTKQYAVIFYEG
Ga0070676_106014292	3300005328	Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTASEYVTPPDAGPKGKA
Ga0070671_1005837671	3300005355	Switchgrass Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLN
Ga0070671_1015000242	3300005355	Switchgrass Rhizosphere	MSTQLKEKNAMTKIKQLSCALSLVGIAITTAYSQDTASEYVAPPDAGPKGKAPRMKVELLNPGERTKQY
Ga0066689_105536022	3300005447	Soil	MEKKSMIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQ
Ga0066682_104483652	3300005450	Soil	MIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQ
Ga0070707_1009686231	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIKIKQLSYALLLGGIAITAAYSQDIPTEYVAPPDAGPKGKA
Ga0066697_103578352	3300005540	Soil	MIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAP
Ga0066700_102123791	3300005559	Soil	LIKVKQFGYALLLLGFAITKGYSQDTATEYVAPSEAVPRGKAPRMKVQLLNLGESTKQYAVIFYQ
Ga0066700_103516552	3300005559	Soil	MINMKKLNYALLLGGMAIATAYSQNKDSEYVAPPDAGPKGKAPRM
Ga0066670_104732223	3300005560	Soil	VIKVKQLSYALSLVGIAFTTGYSQDTASEYVAPSEAVPKGEAPRMKVQLLN
Ga0066694_101498231	3300005574	Soil	MKKLTYALLIGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQL
Ga0066708_107997861	3300005576	Soil	MIKLNQLSHALLLVGAAVTTGYSQDTANEYVAPRDA
Ga0066691_104153832	3300005586	Soil	MIKLKQLSHALLLVGAAVTTGYSQDTANEYVAPRD
Ga0066691_105222882	3300005586	Soil	MTKVRHLSYALLLAGIAATAAQSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGE
Ga0070717_120973081	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDSASEYVAPPDAGPKGKAP
Ga0066652_1003698652	3300006046	Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTESEYVAPPDAGPK
Ga0066652_1009094812	3300006046	Soil	VTKLKQLSYAVLLGGLSIATAHSQSAASEYVAPPDAGPKGK
Ga0070712_1004035352	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAP
Ga0066665_101050684	3300006796	Soil	MIKIKQLSYALLFGGMAITTGYSQDAASEYVAPPDAGPKGKAPRMKVQLL
Ga0066665_113541052	3300006796	Soil	LIKVKQFGYALLLLGFAITKGYSQDSATEYVAPPDAGPKGKAPRMKVQL
Ga0066660_105639653	3300006800	Soil	MITVKQLTYALLLGGIATATAYSQDTAREYVAPRDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQGDE
Ga0066660_111647862	3300006800	Soil	MISVKQLSYALLLGGIAIATAYSQDKDTEYVAPPDAGPKGTAPRM
Ga0099791_100486003	3300007255	Vadose Zone Soil	MIKIKQLSCALLLVGVAITTAYSQDTASEYVAPPDAGPKG
Ga0099791_102147691	3300007255	Vadose Zone Soil	MINMKKLNYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQLLNPGD
Ga0099793_103288753	3300007258	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDAGPKGKAPRMKVQ
Ga0099793_106351011	3300007258	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQSDVDI*
Ga0066710_1004359063	3300009012	Grasslands Soil	LNITLEKNSMIKVKQLSYALLLGGIAITAAYSQDTVTEYVAPPDAGPKGKAPRMKVQLLTPGESTKQ
Ga0066710_1046409302	3300009012	Grasslands Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDAGPKGKA
Ga0099829_107329021	3300009038	Vadose Zone Soil	MITVKQLTYALLLGGIATATTYSQHTTSEYVAPPDAGPKGKASRMKVQLLNPGEP
Ga0066709_1044988531	3300009137	Grasslands Soil	MIKIKQLSYALLLGGIAITAAYSQDTATEYVAPPDA
Ga0099792_109237141	3300009143	Vadose Zone Soil	MINLKQLTYSLLLGGFAMATGYSQDTVEYVAPPDAGPKGKAPRMKVQLLN
Ga0105249_104792053	3300009553	Switchgrass Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDAGPKGKAPRMKVQLLNDGEPMKQY
Ga0134065_104693332	3300010326	Grasslands Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKIKVQLLNPGAPTKQ
Ga0134125_112368421	3300010371	Terrestrial Soil	MIKVKQLSYALLLGGIAITAAYSQYTATEYVAPPDAGPKGKAPRMKVQLL
Ga0134128_105459433	3300010373	Terrestrial Soil	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDAGPKGKAPRMKVQLLNDGEPMKQYA
Ga0134122_114859641	3300010400	Terrestrial Soil	MIKVKQLSYALLLGGIAITAVYSQDAASEYVAPPDAG
Ga0137392_110900091	3300011269	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGK
Ga0137364_102443101	3300012198	Vadose Zone Soil	MIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGK
Ga0137364_102559863	3300012198	Vadose Zone Soil	MITIKQLTYALLLGGIATAAAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNSGEPTKQYAVIFYQ
Ga0137382_103927151	3300012200	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQL
Ga0137382_104479903	3300012200	Vadose Zone Soil	MITVKQLTYALLLGGIATATAYSQDTANEYIAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIF*
Ga0137365_100967584	3300012201	Vadose Zone Soil	MIKIKQLSHALLLGGIAITTVYSQDTATEYVAPPDAGPKGKLPG*
Ga0137363_102095292	3300012202	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKVQLLNPGEKTKQL*
Ga0137399_109612432	3300012203	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPRMKVQ
Ga0137399_110764881	3300012203	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKA
Ga0137362_102361443	3300012205	Vadose Zone Soil	MIKVKQLSYALLLGGIAIATAHSQNKDSEYVAPPDAGPKGKAPRMKVQLLNPGE
Ga0137362_104849253	3300012205	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSRDTATEYVALPDAGPKGKAPKMKVQLLNPGEPTKQYAVIFYQGDEALS
Ga0137362_104896433	3300012205	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQ
Ga0137362_110792362	3300012205	Vadose Zone Soil	MKKLPSALVIGGIAIATAYSQNKDSEYVAPPDAGPKGKA
Ga0137381_115298751	3300012207	Vadose Zone Soil	MINIKQFSYALLLVGFAATAGHAQETTSEYVAPPDAGPKGKAPRMKVQL
Ga0137376_102715873	3300012208	Vadose Zone Soil	MITVKQLTYALLLGGIATATAYSQDTANEYIAPPDAGPKGKAPRMKVQLLNDKEPTK
Ga0137376_115432972	3300012208	Vadose Zone Soil	MIKIKQLSHALLLGGIAITTVYSQDAASEYVAPPDTGPKGKAPTMKVQLLNPGEPTKQ
Ga0137376_117791532	3300012208	Vadose Zone Soil	LNLTLEKNFMIKAKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKMKVQLLN
Ga0137378_101148532	3300012210	Vadose Zone Soil	MVTENSMIKIKQLSHALLLGGIAITTVYSQDTATEYVAPPDAGPKGKLPG*
Ga0137370_109470601	3300012285	Vadose Zone Soil	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLNHGEPTKQYAV
Ga0137358_105715851	3300012582	Vadose Zone Soil	MIIKIKQLSYALLFGGMAITTGYSQDAASEYVAPPDAGPKGKAPRMKVQ
Ga0137395_110934692	3300012917	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKVQ
Ga0137396_113174582	3300012918	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKV
Ga0137394_110073132	3300012922	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYIAPPDAGPKGKAPRMKVQLLNPGEPTK
Ga0137413_101779471	3300012924	Vadose Zone Soil	MEKKSMIKIKQLSYALLLGGIAIATAYSRNKDSEY
Ga0137413_104361991	3300012924	Vadose Zone Soil	MIKVKQLSYALLLGGIAIATAHSQNKDSEYVAPPDAGPK
Ga0137413_105812711	3300012924	Vadose Zone Soil	LIKVKQFGYALLLLGFAITKGYSQDPATEYVAPSEAVPRGKAPRMKVQLLNLG
Ga0137419_113553641	3300012925	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKIKVQLLNP
Ga0137404_112213501	3300012929	Vadose Zone Soil	MIKVELLSCALLLVGFVTTTGHSQETTSEYVAPPDTGPKGKAPKMHVQLLNDE
Ga0137407_107854103	3300012930	Vadose Zone Soil	MIKVKDLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPRM
Ga0164303_109614462	3300012957	Soil	MIKLKQLSYALLLGGIAITAAYSQDTTTEYVAPPDAGPKGKAPKM
Ga0164303_114185502	3300012957	Soil	MIKVKQLSYALLLGGIAITAAYSQETATEYVEPPDAGPKGKAPRMKVQLLNPGETTKQYAVIFYQG
Ga0164301_114715991	3300012960	Soil	MIKVKQLSYALLVGWIAITAAYSQDTASEYVAPPDAGPKGKAPKMKVQ
Ga0164301_115834862	3300012960	Soil	MIKVKQLSYALLLGGIAITAAYSQETATEYVAPPDAGPKGKAPRMKVQLLNPGETT
Ga0164302_101563752	3300012961	Soil	MIKVKQLSYALLLGGIAITAAYSQETATEYVAPPDAGPKGKAPKRKVQLLNPGEAT
Ga0164302_115720551	3300012961	Soil	LIKVKQFGYALLLLGFAITKGYSQDSATEYVAPPDAGPKGKAPRMKVQLLN
Ga0164304_111441811	3300012986	Soil	MINLKQLTYSLLLGGFAMATGYSQETAEYVAPPDAGPK
Ga0157376_129009751	3300014969	Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDTGPKGKAPRMKVQLLNPGE
Ga0137409_114924111	3300015245	Vadose Zone Soil	MEKKSMIKVKQLSYALLLGGIAIATACSRNKDSEYVAPPDAG
Ga0137403_110296502	3300015264	Vadose Zone Soil	MTNIKQLGYALLMGGIAMTRGYSQDTASEYVAPPDAGPKGKA
Ga0134085_104369511	3300015359	Grasslands Soil	MIKVKQLSYALLLGEIAITAAYSQDTASDYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQ
Ga0132256_1038541752	3300015372	Arabidopsis Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDSASEYVAPPDAGQK
Ga0184618_102015721	3300018071	Groundwater Sediment	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTAMEYVAPPDASPKG
Ga0184618_102997812	3300018071	Groundwater Sediment	MIKVKQLSYALLLGGIAITAAYSQDTAMEYVAPPDASPKG
Ga0066655_103148282	3300018431	Grasslands Soil	MFLLKQLSYALVLVGLVVPRGGSQDTASEYVAPPDAGPKGTAPRMKVQLLNLEKG
Ga0066667_112586452	3300018433	Grasslands Soil	MTTLKRLSYALLLGGIASATAYSQDTASEYVAPPDAGPKGKAPRMKVQLLNPGE
Ga0193744_10266641	3300019874	Soil	MMNLKQLTYSLLVGVFAMATGYSQDSATEYVAPPDAGPKGNAPRMKV
Ga0193707_10426711	3300019881	Soil	MINLKKLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQSLN
Ga0193713_11716581	3300019882	Soil	MMNLKRLTYSLLVGGFAMATGYSQGSATEYVAPPDAGPKGNAPRMKVRLLNDGEPTKQYSVIF
Ga0193713_12052001	3300019882	Soil	MIALKQLTYALLLGGIATATAYSQDTASEYVAPPDAGPKGKAPRMKVELLNP
Ga0193718_10399442	3300019999	Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTATDYVAPPDAG
Ga0193755_12065551	3300020004	Soil	MIKVKQLSYALLLGGIAITAAYSQDSATEYVAPPDAGPK
Ga0193749_10396701	3300020010	Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQ
Ga0179594_100360671	3300020170	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKVQLLNPGEKTKQL
Ga0210407_110410113	3300020579	Soil	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLSDGEPTKQY
Ga0193709_10143591	3300021411	Soil	MIKVKQLSYALLLGGIAITAAYSQDSATEYVAPPDAGPKGKAPRMK
Ga0193709_10947231	3300021411	Soil	MMNLKQLTYSLLVGVFAMATGYSQDSATEYVAPPDAGPKGNAPRMKVRLLNDGEPTKQYSVI
Ga0193750_10085296	3300021413	Soil	MIAVKQLTYALLLGGIAAATAYSQDTASEYVAPPDAGPTGKAPRMKVQ
Ga0193750_10912512	3300021413	Soil	MIKVKLLGYALSLVGVAVATTYSQDTTSEYVAPPDAGPKGKAPRMKVQLL
Ga0210392_100528233	3300021475	Soil	LNLTLEKNSMMKVKQLSYALLLGGMAITAAYSQGTASEYVAPPDAGPKGKAPKMKVQLLNPGAPTKQY
Ga0222622_100915621	3300022756	Groundwater Sediment	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLNDGEPTKQYAVIFYQE
Ga0222622_105197191	3300022756	Groundwater Sediment	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGESTKQYAVIFYQGDE
Ga0179589_103070252	3300024288	Vadose Zone Soil	MIKLKQISYAVLLSGLALTRGYSQDAGYVAPPDAGPKGNAPRMKVQLLNPGDPTKQYAV
Ga0179589_105979561	3300024288	Vadose Zone Soil	VIKIKQLSYALLLVGIAITTAYSQDTASEYVAPSDAGPKGKAPRMKIQLLNP
Ga0207657_102702961	3300025919	Corn Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTASEYVTPPDAGPKGKAPKIKVQLLNPGAPTKQYAVIFYE
Ga0207646_109124083	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIKAKRLSCALLLSGMAIATGHSQDTEYVAPPDAGPKGKAPRMKVQLLNEGAPTKQ
Ga0207700_117066851	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLNDGEPTKQYAV
Ga0207706_101589034	3300025933	Corn Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDAGPKGKAPRMKVQLLNDGEP
Ga0207704_104797652	3300025938	Miscanthus Rhizosphere	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDA
Ga0207704_119762583	3300025938	Miscanthus Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDA
Ga0209238_11811782	3300026301	Grasslands Soil	MIKIKQLSYTLLLGGIAITTVYSQHTATEYVAPPDAGPKGKAPRM
Ga0209470_11831401	3300026324	Soil	LNLILEKNSMIKVKQLSYALLLVGIAITAAFSQDTATEYVAPPDADPKGKAPRMKVQLLNPGEPTKQYAVIFY
Ga0209267_10573331	3300026331	Soil	MITVKQLTYALLLGGIATATAYSQDTANEYVAPPDAGPKGKAPRMKVQ
Ga0209806_10317621	3300026529	Soil	LIKVKQFGYALLLLGFAITKGYSQDTATEYVAPSEAVPRGKAPRMKVQL
Ga0209805_13412711	3300026542	Soil	MIKIKQLSCALLLVGIAITTAYSQDTASEYVAPPDAGPKGKAPRMKVQLL
Ga0209805_13777852	3300026542	Soil	MIKIKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMQVQLLNPGEKTKQL
Ga0209161_102010011	3300026548	Soil	LIKVKQFGYALLLLGFAITKGYSQDSATEYVAPPDAGPKGKAPRMKVQLLNDGEPTK
Ga0179587_106024772	3300026557	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSADTASEYVAPPDTGPKGKAPRMKVQLLNPGEKTKQL
Ga0207603_1026301	3300026820	Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDSASEYVAPP
Ga0209329_10172121	3300027605	Forest Soil	MIALKQLTYALLLGGIASATAYSQDTANEYVAPSDAGPKGKAPRMKVQLLNPGEPTKQYAVIF
Ga0209076_11195222	3300027643	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPKMKVQLLNPGEPTKQYAVI
Ga0209328_101437742	3300027727	Forest Soil	MIKLKQLSYALVSVGIAAITTGYSQDTASEYVAPSEA
Ga0209488_104765712	3300027903	Vadose Zone Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPK
Ga0209488_105582081	3300027903	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQY
Ga0268264_123412392	3300028381	Switchgrass Rhizosphere	LNLTLEKNSMIKAKQLSYALLLGGIAITAAYSQDTATQYVAPPDAGPK
Ga0307305_104897421	3300028807	Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPK
Ga0075374_107384702	3300030855	Soil	MIKIKQFSYAVLFGGIAIAAAYSQDTASDYVAPPDAGPKGKAPRMKVQLLNPGEPTKQY
Ga0170834_1027829851	3300031057	Forest Soil	MINVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQ
Ga0170834_1065360841	3300031057	Forest Soil	MTKIKQLGCALSLVGIAITTAYSQDTASEYVAPPEAGPKGKAPRMKVELLN
Ga0170824_1212008473	3300031231	Forest Soil	MIKVMRLSCALLLSGMAIATGHSQDTEYVAPPDAGPKGKAPRMKVQLLNEGTPT
Ga0170824_1288744581	3300031231	Forest Soil	MIKVKQLSYALLLGGIAITAAYSQDTAAEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYA
Ga0170820_141917672	3300031446	Forest Soil	MIKVKQLSYALLLGGIAITAAYSQDTAAEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQGDE
Ga0170819_157498354	3300031469	Forest Soil	MIKIKQFSYAVLFGGIAITAAYSQDTASDYVAPPDAGPKGKAPRMKVQLLNPGEPT
Ga0307477_102486583	3300031753	Hardwood Forest Soil	MLKVKRLSCALLLSGMAIATGHSQDTEYVAPPDAGPKGKAPRMKVQLLNQG
Ga0307475_106541433	3300031754	Hardwood Forest Soil	MIALKQLTYALLLGGIATTAAYSQDTASEYVAPPDAGPKGKAPR
Ga0307475_107265141	3300031754	Hardwood Forest Soil	MIKAKRLGCALLLSGMAIATGHSQDTEYVAPPDAGPIGKAPRMKVQLLNEGALTKQYAV
Ga0307473_111736381	3300031820	Hardwood Forest Soil	LIKVKQFGYALLLLGFAITKGYSQESATEYVAPPDAGPKGKAPRMKVRLLNDG
Ga0307471_1001325291	3300032180	Hardwood Forest Soil	MIALKQLTYALLLGGIATTAAYSQDTASEYVAPPDAGPKGK
Ga0307471_1009036051	3300032180	Hardwood Forest Soil	MTALKQLTYALLLGGITTATGYSQDTASEYVAPPDAGPKGKAPR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049813

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences