Metagenome / Metatranscriptome Family F049772

Basic Information
Family ID	F049772
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	53 residues
Representative Sequence	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPAGGGSLLHNHAVLEG
Number of Associated Samples	136
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.89 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.52 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (81.507 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.657 % of family members)
Environment Ontology (ENVO)	Unclassified (19.863 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.370 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1JGI12627J18819_100831391 2JGI24738J21930_101228302 3JGIcombinedJ51221_104099211 4Ga0062589_1020896381 5Ga0062388_1011425992 6Ga0062388_1017278142 7Ga0066676_109636652 8Ga0070669_1004093382 9Ga0070713_1011675351 10Ga0070708_10000767115 11Ga0070708_1015153871 12Ga0070707_1016922442 13Ga0073909_103784712 14Ga0070730_105495421 15Ga0066697_102540522 16Ga0070732_106997481 17Ga0070763_101934672 18Ga0075029_1001698821 19Ga0075432_103139302 20Ga0070765_1015165701 21Ga0068871_1015012732 22Ga0079220_117100732 23Ga0079219_101283132 24Ga0105251_100770891 25Ga0105240_117557162 26Ga0075423_102809591 27Ga0105241_123391811 28Ga0116218_14250151 29Ga0116221_11074351 30Ga0116224_102919082 31Ga0116217_102733332 32Ga0116217_103538331 33Ga0116219_103658211 34Ga0126380_120482272 35Ga0099796_103540041 36Ga0134109_104045471 37Ga0136449_1008006192 38Ga0136449_1033982122 39Ga0137389_110171761 40Ga0137364_100917691 41Ga0137365_106822532 42Ga0137380_106925371 43Ga0137386_103762762 44Ga0157329_10164792 45Ga0157302_105321041 46Ga0164303_111786551 47Ga0164308_104331751 48Ga0182024_123888122 49Ga0132257_1039697671 50Ga0182036_105241202 51Ga0182036_112993751 52Ga0182040_101686221 53Ga0187818_100657211 54Ga0187818_102746181 55Ga0187824_103751732 56Ga0187814_103091511 57Ga0187808_100959852 58Ga0187783_101804641 59Ga0187823_100224161 60Ga0187822_101357032 61Ga0187805_104975751 62Ga0187890_107146172 63Ga0187858_105599551 64Ga0187766_106720772 65Ga0187772_112378822 66Ga0187770_114589352 67Ga0193728_11987882 68Ga0210400_106758451 69Ga0213881_101620782 70Ga0213875_101340951 71Ga0210385_100265364 72Ga0210397_115669692 73Ga0210389_105879351 74Ga0193695_10898001 75Ga0210390_112741311 76Ga0210398_111542042 77Ga0210402_102134863 78Ga0210410_111039731 79Ga0126371_133261371 80Ga0242673_10048942 81Ga0247694_10328502 82Ga0247669_10942061 83Ga0247681_10677362 84Ga0207699_104194902 85Ga0207663_101032333 86Ga0207660_101107843 87Ga0207646_112285182 88Ga0207681_102286311 89Ga0208369_10080642 90Ga0207949_10177171 91Ga0208237_10473632 92Ga0209525_10186971 93Ga0208324_11160132 94Ga0209248_100749372 95Ga0209177_101621852 96Ga0209579_104748162 97Ga0209275_100478651 98Ga0209275_100518611 99Ga0209068_103127451 100Ga0209624_103854572 101Ga0209698_110079171 102Ga0209062_12250691 103Ga0209526_109664392 104Ga0247682_10355221 105Ga0302221_102661431 106Ga0302229_103886172 107Ga0308309_104402882 108Ga0302176_102900942 109Ga0310037_101933121 110Ga0311357_118136782 111Ga0310039_104041852 112Ga0310038_101630262 113Ga0302324_1000995125 114Ga0302326_118037372 115Ga0302326_135451731 116Ga0318534_102563682 117Ga0318571_103464131 118Ga0318528_107830441 119Ga0318573_107529091 120Ga0318555_104603761 121Ga0318542_102335312 122Ga0318561_101280891 123Ga0318561_103281912 124Ga0318560_108255902 125Ga0310686_1013327412 126Ga0310686_1037264841 127Ga0306917_100782171 128Ga0318494_106317062 129Ga0318521_108068162 130Ga0318543_101597452 131Ga0318498_103240281 132Ga0318547_106403041 133Ga0318552_101148942 134Ga0318523_104045982 135Ga0318565_105018681 136Ga0318511_102896641 137Ga0318544_102650821 138Ga0306923_123326921 139Ga0318562_105227572 140Ga0318556_104754002 141Ga0318524_101268731 142Ga0318553_102032882 143Ga0311301_104750061 144Ga0307470_102414641 145Ga0306920_1026198911 146Ga0334804_053767_1_150
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1JGI12627J18819_100831391 2JGIcombinedJ51221_104099211 3Ga0062388_1011425992 4Ga0062388_1017278142 5Ga0070732_106997481 6Ga0075029_1001698821 7Ga0070765_1015165701 8Ga0105251_100770891 9Ga0116224_102919082 10Ga0182024_123888122 11Ga0187783_101804641 12Ga0187822_101357032 13Ga0187805_104975751 14Ga0187890_107146172 15Ga0187770_114589352 16Ga0213875_101340951 17Ga0242673_10048942 18Ga0209525_10186971 19Ga0209624_103854572 20Ga0209062_12250691 21Ga0302326_118037372 22Ga0318534_102563682 23Ga0318573_107529091 24Ga0318561_101280891 25Ga0306923_123326921 26Ga0334804_053767_1_150
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54 1Ga0207681_102286311 2JGI24738J21930_101228302 3Ga0062388_1011425992 4Ga0070730_105495421 5Ga0070732_106997481 6Ga0079219_101283132 7Ga0126380_120482272 8Ga0137389_110171761 9Ga0164303_111786551 10Ga0182024_123888122 11Ga0187818_100657211 12Ga0187808_100959852 13Ga0187783_101804641 14Ga0187822_101357032 15Ga0187858_105599551 16Ga0187772_112378822 17Ga0187770_114589352 18Ga0210400_106758451 19Ga0213881_101620782 20Ga0213875_101340951 21Ga0210385_100265364 22Ga0210389_105879351 23Ga0207699_104194902 24Ga0209525_10186971 25Ga0208324_11160132 26Ga0209579_104748162 27Ga0209275_100478651 28Ga0209275_100518611 29Ga0209062_12250691 30Ga0302221_102661431 31Ga0310037_101933121 32Ga0302326_118037372 33Ga0318534_102563682 34Ga0318528_107830441 35Ga0318573_107529091 36Ga0318561_101280891 37Ga0310686_1013327412 38Ga0318556_104754002 39Ga0334804_053767_1_150
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.24% β-sheet: 0.00% Coil/Unstructured: 59.76%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00535	Glycos_transf_2	15.75
PF03176	MMPL	14.38
PF12802	MarR_2	1.37
PF13671	AAA_33	0.68
PF00392	GntR	0.68
PF00069	Pkinase	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	14.38
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	14.38
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.74

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.51 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.51 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.51 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.82 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	42.47 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.66 %
Unclassified	root	N/A	18.49 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	42.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	42.47 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.05 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	20.55 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	42.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.05 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	20.55 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	42.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.05 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	20.55 %
Unclassified	root	N/A	18.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	42.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.05 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	20.55 %
Unclassified	root	N/A	18.49 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10083139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1328	Open in IMG/M
3300002075\|JGI24738J21930_10122830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	565	Open in IMG/M
3300003505\|JGIcombinedJ51221_10409921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	550	Open in IMG/M
3300004156\|Ga0062589_102089638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	577	Open in IMG/M
3300004635\|Ga0062388_101142599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	767	Open in IMG/M
3300004635\|Ga0062388_101727814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	640	Open in IMG/M
3300005186\|Ga0066676_10963665	Not Available	569	Open in IMG/M
3300005353\|Ga0070669_100409338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1111	Open in IMG/M
3300005436\|Ga0070713_101167535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	745	Open in IMG/M
3300005445\|Ga0070708_100007671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8645	Open in IMG/M

Showing 1 to 10 of 146 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.78%
Host-Associated	Host-Associated	8.22%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	10.96%
Plants	Host-Associated → Plants	8.22%
Terrestrial	Environmental → Terrestrial	80.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	8.90%
Peat	Environmental → Terrestrial → Peat	5.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.79%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%
Roots	Host-Associated → Plants → Roots	1.37%
Sediment	Environmental → Aquatic → Sediment	2.05%
Soil	Environmental → Terrestrial → Soil	74.66%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Loam	Environmental → Terrestrial → Soil → Loam	14.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.05%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.42%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.37%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.48%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.37%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.37%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.68%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.37%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.05%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 136 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100831391	3300001867	Forest Soil	MRHLVGVMLAIVMAAALYFAASWGYLKLLIGPAGVGRLPAGGGSLL
JGI24738J21930_101228302	3300002075	Corn Rhizosphere	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGVVRLPAGGGSLLH
JGIcombinedJ51221_104099211	3300003505	Forest Soil	MSEMRHLVGVMLAIVMAAALFFAASWGYLKLLIGPAGLGRLPAGGGTLLHDHAVLEGF
Ga0062589_1020896381	3300004156	Soil	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGVGRLPAGGGSLLHNHAVLEGFGAMLG
Ga0062388_1011425992	3300004635	Bog Forest Soil	MRHLLGVVLAIVLAAVIFFAASWGYLKLLIGPARLGALAAGGGSLLRDHA
Ga0062388_1017278142	3300004635	Bog Forest Soil	MRHLLGVVLAIVLAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHAVLEGFGALL
Ga0066676_109636652	3300005186	Soil	MRHLVGVMLAIVMAAAVYFAASWGYLKLLIGPAGLGRLPGGGGSLLHNHAVLEGF
Ga0070669_1004093382	3300005353	Switchgrass Rhizosphere	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPAGGGSLLHNH
Ga0070713_1011675351	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLMGVVLAIVLAAAVFFAASWGYLKLLIGPAGPGSGSLPAAGGSLLHNHAV
Ga0070708_10000767115	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLVGVVLAIVLAAAVFFAASWGYLKLLIAPSALGTLPGGGGSLLHNHAVLEGFGALLGVG
Ga0070708_1015153871	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPAGGGSLLHNHAVLEGFGALLA
Ga0070707_1016922442	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLVGVMLAIVMAAAVFFAASWGYLRLLIGPAGLGRLPAGGGSLLH
Ga0073909_103784712	3300005526	Surface Soil	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGIGRLPAGGGSLLHNHAVLEG
Ga0070730_105495421	3300005537	Surface Soil	MRHLIGVALAIVMAAAVFFAASWGYFKLLSGLAGSGLPGGGGTLIHDHAVLEGLGALL
Ga0066697_102540522	3300005540	Soil	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPGGGGSLLHDHAVLEGFG
Ga0070732_106997481	3300005542	Surface Soil	MRHLIGVGLAMVMAAAVFFAASWGYLKLLTGPARSAVLPAGASSLIHNHAVVEGFAALL
Ga0070763_101934672	3300005610	Soil	MRHLVGVVLAIVLAAAVFFVASWGYLKLLIVPAPGTLPGGGGSLLHNHAVLEGFGA
Ga0075029_1001698821	3300006052	Watersheds	MRPAVSFSLWIPKGLSDMRHLVGVILAIVLAAAVFFAASWGYLKLLIGPAGPGRLPGGGGSLLHNHAVLEG
Ga0075432_103139302	3300006058	Populus Rhizosphere	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGVGRLPAGGGSLLHNHAVLEG
Ga0070765_1015165701	3300006176	Soil	MRHLVGVVLAIVMAAAVFFAASWGYLRLGLGSARLATLPGGGGSLF
Ga0068871_1015012732	3300006358	Miscanthus Rhizosphere	MRHLMGVVLAIVMTAAIFFAASWGYLKLLIGPAGPGSGALPGAGGSLL
Ga0079220_117100732	3300006806	Agricultural Soil	MRHLVGVMLAVIMAAALYFAASWGYLRLLIGPAGLGRLPAGGGSLLHNHAVLEGFGALLG
Ga0079219_101283132	3300006954	Agricultural Soil	MRHLVGVMLAVIMAAALYFAGSWGYLRLLIGPAGLGRLPAGGGSLLHNHAVLEGF
Ga0105251_100770891	3300009011	Switchgrass Rhizosphere	MLAIIMAAALFFAASWGYLKLLIGPTGVGRLPAGGGSLLHNHAVLE
Ga0105240_117557162	3300009093	Corn Rhizosphere	MSEMRHLVGVMLAIVMAAALFFAASWGYLKLLIGPAGLGRLPGGGGTLLHDHAVLEGFG
Ga0075423_102809591	3300009162	Populus Rhizosphere	MLAIIMAAALFFAASWGYLKLLIGPAGVGRLPAGGGSLLHNHAVLEGFGVMLAVGL
Ga0105241_123391811	3300009174	Corn Rhizosphere	MRHLVGVILAIVLAAAIFFAASWGYLKLLIGPAGIGRLPAGGGSLLHNHAVLEGF
Ga0116218_14250151	3300009522	Peatlands Soil	MRHLLGVVLAIVLAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHA
Ga0116221_11074351	3300009523	Peatlands Soil	MSDMRHLVGVALAIVLAAAVFFAASWGYLKLLIGPAPPGALPGGGGSLLHNHAVLEGFG
Ga0116224_102919082	3300009683	Peatlands Soil	MSDMRHLVGVALAIVLAAAVFFAASWGYLKLLIGPAPPGALPGGGGSLLHN
Ga0116217_102733332	3300009700	Peatlands Soil	MRHLLGVVLAIVLAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHAVL
Ga0116217_103538331	3300009700	Peatlands Soil	MRHLVGVALAIVLAAVVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHA
Ga0116219_103658211	3300009824	Peatlands Soil	MSDMRHLVGVALAIVLAAAVFFAASWGYLKLLIGPAPPGALPGGGGSLLHNHAVLEGFGV
Ga0126380_120482272	3300010043	Tropical Forest Soil	MLAIIMAAALYFAASWGYLKLLIGPVGLGRLPADGGSLLHNHAVLEGF
Ga0099796_103540041	3300010159	Vadose Zone Soil	MSEMRHLVGVMLAIVMAAALFFAASWGYLKLLIGPAGLGRLPGGGGSLLHDHAVLEGFGALLG
Ga0134109_104045471	3300010320	Grasslands Soil	MSEMRHLVGVMLAIVMAAAVFFAVSWGYLKLLIGPAGLGRLPGGGGSLLHNHAVLE
Ga0136449_1008006192	3300010379	Peatlands Soil	MRHLVGVLLAIVLAAAVFFAASWGYVKLLLGPLGPLPAGGGSLLHHT
Ga0136449_1033982122	3300010379	Peatlands Soil	MRHLLGVVLAIALAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHAVL
Ga0137389_110171761	3300012096	Vadose Zone Soil	MRHLVGVVLAVALAAAVFFAASWGYLKLLIAPSALGSLPGGGGSLLHNHGVLEGF
Ga0137364_100917691	3300012198	Vadose Zone Soil	MSDMRHLVGVMLAIIMAAAVFFAASWGYLKLLIGPAGLGRLPGGGGSLLHDHAVLEGFG
Ga0137365_106822532	3300012201	Vadose Zone Soil	MSDMRHLVGVMLAIIMAAAVFFAASWGYLKLLIGPAGLGRLPAGGGSLLHNH
Ga0137380_106925371	3300012206	Vadose Zone Soil	MRHLVGIVLAIVLAAAVFFAASWGYLKLLIGPAGPGSGSLPAAGGSLLHNHAVLEGFG
Ga0137386_103762762	3300012351	Vadose Zone Soil	MSEMRHLVGVMLAIVMAAALFFAASWGYLKLLIGPAGLGRLPGGGGTLL
Ga0157329_10164792	3300012491	Arabidopsis Rhizosphere	MLAIVMAAALFFAASWGYLKLLIGPTGVGRLPAGGGSLLHNHAVLEGFGVMLG
Ga0157302_105321041	3300012915	Soil	MLAIIMAAALFFAASWGYLKLLIGPVGLGRLPAGGGSLLHDHAVLEGFGALL
Ga0164303_111786551	3300012957	Soil	MRHLVGVILAIILAAAIFLAASWAYLKLLIGPAGVGRLPAGGGSLLHNHA
Ga0164308_104331751	3300012985	Soil	MSEMRHLVGVMLAIVMAAAVFFAASWGYLRLLIGPAGLGRLPAGGG
Ga0182024_123888122	3300014501	Permafrost	MRHLVSVILAIAMAAAVFFAASWGYLKLLTGSGKFGTLPAGGGSLLHDRTVVEGFGAL
Ga0132257_1039697671	3300015373	Arabidopsis Rhizosphere	MRHLMGVVLAIVMAAAVFFAASWGYLKLLIGPAGPGGRLPAAGGSLLHNHAVLEG
Ga0182036_105241202	3300016270	Soil	MRHLIGVALAIVMGAAVFFAASWGYLKLFIGPARTAVLPAGGGSL
Ga0182036_112993751	3300016270	Soil	MRHLVGVMLAIVMAAALYFAASWGYLKLLIGPAGVGRLPAGGGSLLHNHAV
Ga0182040_101686221	3300016387	Soil	MRHLIGVALAIVMAAAVYFAASWGYLKLLIGPARAGVLPAGGGSLIHDHAVL
Ga0187818_100657211	3300017823	Freshwater Sediment	MRHLIGVALAIVMAAVVFFAGSWGYLKLLTGPARNGVLPAGGSLIHDHAVIEGIVALLAV
Ga0187818_102746181	3300017823	Freshwater Sediment	MRHLLGVVLAIVLAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHAVLEGFGALLG
Ga0187824_103751732	3300017927	Freshwater Sediment	MRHLIGVILAIAMAAAVFFAASWGYLKLLIGPAKDGVLPAGGGSLIH
Ga0187814_103091511	3300017932	Freshwater Sediment	MRHVNGVALAIVMAAAVFFAGSWGYLKLLIGPAKGGVLPAGGGSLIHDHAVLEG
Ga0187808_100959852	3300017942	Freshwater Sediment	MRHLIGVALAIVMAAAVFFAASWGYLKLLIGPAKTGVLPAGGGSLIHDHAVLEGFGVLLA
Ga0187783_101804641	3300017970	Tropical Peatland	MRHLIGVGLAIVMAAMVFFAGSWGYLKLLIGPVRAGVLPAAGGSLIHNHAVL
Ga0187823_100224161	3300017993	Freshwater Sediment	MRHLIGVILAIAMAAAVFFAASWGYLKLLIGPAKDGVLPAGGGSLIHDHAVLEGFGVLL
Ga0187822_101357032	3300017994	Freshwater Sediment	MRHLIGVGLAIVMAAALFFAASWGYLKLLTGPARSDVLSAGVGFLIH
Ga0187805_104975751	3300018007	Freshwater Sediment	MRHVMRHLIGVALAIVMAAAVFFAGSWGYLKLLTGPAKGGVLPAGGGSLIHDHAVLEGFGVLLA
Ga0187890_107146172	3300018044	Peatland	MRHLIGVVLAIVLAAAVFFAASWGYLKLLTANLYQENLTGPSRFGTLPSAGSGSLLHDRTVL
Ga0187858_105599551	3300018057	Peatland	MRHLIGVVLAIVMAAAVFFAASWGYLKLLTGSGRFGTLPAGGGSLLHDRTVIEGFG
Ga0187766_106720772	3300018058	Tropical Peatland	MRHLVGVLLAIVMAAAVFFGASWGYLKLLIAPARGGALPAGGGSLIHSHAV
Ga0187772_112378822	3300018085	Tropical Peatland	MRHLVGVLLAIVMAAAVFFAASWGYLKLLILPVRGGPLPAGGGSLIHNHAVLEGF
Ga0187770_114589352	3300018090	Tropical Peatland	MRHLVGVLLAVVLAAAVFFAASWGYVKLLLGPLGPLPAGGGSLLHHTAILEGLGALAGV
Ga0193728_11987882	3300019890	Soil	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPGGGGSLLHNQAVLE
Ga0210400_106758451	3300021170	Soil	MRHLIGVALAIVMAAAVFFAASWGYLKLLSGSARGTLPAGSGSLIHNHAVLEGFGV
Ga0213881_101620782	3300021374	Exposed Rock	MRHLVGVALAIVLAAAVFFAASWGYLKLLIAPAALGGTLPANGGSLLP
Ga0213875_101340951	3300021388	Plant Roots	MRHLLGVVLAVVLAAVVFFVASWGYLKLLLATAGVGAAPVHGDSLWHAHTELEAFGALL
Ga0210385_100265364	3300021402	Soil	MRHLIGVVLAIVMAAAVFFASSWGYLKLLNAPARVAGVLPAGGGSLIHTHAVIEGL
Ga0210397_115669692	3300021403	Soil	MRHLVGVVLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPAGGGSLLHDHAVLEGFGALL
Ga0210389_105879351	3300021404	Soil	MRHLVGLLLAIVLAAAVFFAASWGYLRLLIGPAGIGALPGGGGSLLHNHAVLEGFGALLG
Ga0193695_10898001	3300021418	Soil	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPGGGGSLLHNHAVL
Ga0210390_112741311	3300021474	Soil	MSDMRHLVGVVLAIVLAAAVFFAASWGYLRLLIGPAGLGALPGGGGS
Ga0210398_111542042	3300021477	Soil	MRHLIGVVLAIVMAAAVFFASSWGYLKLLNAPARVAGVLPAGGGSLIHNHA
Ga0210402_102134863	3300021478	Soil	MRHLVGVMLAIVMAAALFFAASWGYLKLLIGPAGLGRLPAGGGTLLHDQAVLEGFGALLGVS
Ga0210410_111039731	3300021479	Soil	MRHLIGVALAIVMAAAVFFAASWGYLKLLSGSARGTLPAGSGSLIHDHAV
Ga0126371_133261371	3300021560	Tropical Forest Soil	MRHLVGLMLAIIMAAALYFAASWGYLKLLIGPVGLGRLPAGGGSLLHNHAVLEGFGAL
Ga0242673_10048942	3300022716	Soil	MRHLIGVALAIVIAAAVFFAASWGYLKLLSGSARGTLPAGSGSP
Ga0247694_10328502	3300024178	Soil	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGVGRLPAGGGSLLHNHAVLEGFGVMLG
Ga0247669_10942061	3300024182	Soil	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPAGVGRLPAGGGSLLHNHAVLEGFGVM
Ga0247681_10677362	3300024310	Soil	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGVGRLPAGGGSLLHNHAVL
Ga0207699_104194902	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLMGVVLAIVMSAAVFFAASWGYLKLLIGPAGPGSGSLPAAGGSLLHN
Ga0207663_101032333	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLMGVVLAIVMSAAVFFAASWGYLKLLIGPAGPGSGSLPAAGGSL
Ga0207660_101107843	3300025917	Corn Rhizosphere	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGVGRLPAGGGSLLHNHAVLEGFG
Ga0207646_112285182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRHLVGVMLAIVMAAAIFFAASWGYLKLLIGPAGLGRLPGGGGSLLHDHAVLEGFGALL
Ga0207681_102286311	3300025923	Switchgrass Rhizosphere	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPAGGGSLLHNHAVLEG
Ga0208369_10080642	3300026998	Forest Soil	MRHLLGVALAIIMAAAVFFAGSWGYLKLLSGSAKGTLPAGSGSL
Ga0207949_10177171	3300026999	Forest Soil	MRHLIGVALAIVMAAAVFFAASWGYLKLLSGSARGTLPAGSGSLIHNHAVL
Ga0208237_10473632	3300027080	Forest Soil	MRHLIGVVLAIVMAAAVFFASSWGYLKLLNAPARVAGVLPAGGGS
Ga0209525_10186971	3300027575	Forest Soil	MRHLIGVALAIVLAAAVFFAGSWGYLKLLSVSAKGALPAGDGTLIHNHAVLEG
Ga0208324_11160132	3300027604	Peatlands Soil	MRHLLGVVLAIVLAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHAVLEGFGA
Ga0209248_100749372	3300027729	Bog Forest Soil	MRHLIGVALAIVMAAAVFFAASWGYLKLLSGSAKGTLPAGSGSLIHDHAV
Ga0209177_101621852	3300027775	Agricultural Soil	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPAGVGRLPAGGGSLLHNHAVLEGFGA
Ga0209579_104748162	3300027869	Surface Soil	MRHLVGVILAIVMAAAIFFAASWGYLKLLTGPARSAVLPAGSGSLIHDHAVVEGFAALL
Ga0209275_100478651	3300027884	Soil	MRHLIGVALAIVMAAAVFFGGSWGYLKLLGASAKATLPAGSGSLIHDH
Ga0209275_100518611	3300027884	Soil	MRHLVGVVLAIVMAAAVFFAASWGYLRLGLGSARLATLPGGGGSLFSDRNLLEG
Ga0209068_103127451	3300027894	Watersheds	MRHLVGVLLAIVMAAAVFFAASWGYLKLLIGPAGLGTLPAGGGSLLHNHAVLEGF
Ga0209624_103854572	3300027895	Forest Soil	MRHLVGIVLAIVMAAAVFFAASWGFLRLGLGSARPGTLPSGSLFSDRNLLEGF
Ga0209698_110079171	3300027911	Watersheds	MRHLVGVLLAIVMAAAVFFAASWGYLKLLIGPAGLGTLPAGGGSLLHN
Ga0209062_12250691	3300027965	Surface Soil	MRHLIGVLLAIVMAAAVFFAASWGYQRLLIVPARVLPAGGGSLLHDRQVLE
Ga0209526_109664392	3300028047	Forest Soil	MRHLIGVALAIVLAAAVFFAGSWGYLKLLSVSAKGTLPAGNGSLI
Ga0247682_10355221	3300028146	Soil	MRHLVGVMLAIIMAAALFFAASWGYLKLLIGPTGIGRLPAGGGSLLHNHAVLEGFG
Ga0302221_102661431	3300028806	Palsa	MDMRHLLGVVLAIVLAAAVFFAGSWGYLKLLIGPAKLSALPAGGGSLLHDKAVLEGFGAL
Ga0302229_103886172	3300028879	Palsa	MRHLIGVALAIVMAAAVFFAGSWGYLKLLAGPANRVLPAGGGSLIHDHAVLEGF
Ga0308309_104402882	3300028906	Soil	MRHLVGVMLAIVMAAALYFAASWGYLKLLIGPAGPGRLPAGGGSLLHDHA
Ga0302176_102900942	3300030057	Palsa	MRHLIGVGLAVVMAAAVFFAASWGYLKLLTGSGKFGTLPAGGGSLLHDRTVVEGFG
Ga0310037_101933121	3300030494	Peatlands Soil	MRHLVGIALAIVLAAAVFFAASWGYLKLLIAPAPPGALPGGGGSLLHNHAVLEGFGALL
Ga0311357_118136782	3300030524	Palsa	MRHLIGVALAIVMAAAVFFAGSWGYLKLLPGPANRVLPAGGGSLIHDHAV
Ga0310039_104041852	3300030706	Peatlands Soil	MRHLLGVVLAIALAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHAVLEG
Ga0310038_101630262	3300030707	Peatlands Soil	MRHLLGVVLAIVLAAAVFFAASWGYLKLLIGPAGPGTLPGGGGSLLHNHAVLEG
Ga0302324_1000995125	3300031236	Palsa	MRHLIGVGLAVVMAAAVFFAASWGYLKLLTGSGKFGTLPAGGGS
Ga0302326_118037372	3300031525	Palsa	MRHVTGVVLAVVLAAAVFFAGSWGYLKLLASPARRGVLPAAGASLIHDHAVIEGFGAL
Ga0302326_135451731	3300031525	Palsa	MRHLIGVALAIVMAAAVFFAGSWGYLKLLAGPANRVLPAGGGSLIHDHAVLEGFGALL
Ga0318534_102563682	3300031544	Soil	MRHLAGVVLAVVMAAAVFFAASWGYLKLLILPAGSGALPVGKISSLRY
Ga0318571_103464131	3300031549	Soil	MRHLIGVALAIVMGAAVFFAASWGYLKLFIGPARTAVLPAGGGSLIHNHAVLE
Ga0318528_107830441	3300031561	Soil	MRHLIGVGLAMVMAAAVFFAASWGYLKLLTGPARSGVLPAGGGTLIHDHA
Ga0318573_107529091	3300031564	Soil	MRHLIGVALAIVMAAAVFFAASWGYQTLLNGPARTGVLPAGGSFIHD
Ga0318555_104603761	3300031640	Soil	MRHLVGVMLAIVMAAALYFAASWGYLKLLIGPAGVGRLPAGGGSLLHNH
Ga0318542_102335312	3300031668	Soil	MRHLVGVMLAIIMAAVLYFAASWGYLKLLIGPAGLGRLPAGGGSLVHNHAVLEGFG
Ga0318561_101280891	3300031679	Soil	MRHLVGVLLAVVMAAAVFFVASWGYLKLRLGPVRGGALPVGGGSLIHNHVVLE
Ga0318561_103281912	3300031679	Soil	MRHLIGVALAIVMAAAVYFAASWGYLKLLIGPARAGVLPAGGGSLIHDHAVLE
Ga0318560_108255902	3300031682	Soil	MRHLVGVMLAIVMAAALYFAASWGYLKLLIGPAGVGRLPAGGGSLLHNHAVLEGFG
Ga0310686_1013327412	3300031708	Soil	MRHLLGVVLAIVMAAAVFFAASWGYLKLLIGPAGLGTLPAGGGSLLHDRPVT
Ga0310686_1037264841	3300031708	Soil	MRHLVGVVLAIVLAAAVFFAASWGYLKLLIGPAGLGALPGGGGSLLHNHAVLEGFGALLG
Ga0306917_100782171	3300031719	Soil	MRHLIGVALAIVMGAAVFFAASWGYLKLFIGPARTAVLPAGGGSLIHNHAVLEGFGALLA
Ga0318494_106317062	3300031751	Soil	MRHLIGVALAIVMAAAVFFAASWGYLTLLIGPARTGVLPAAGGSLI
Ga0318521_108068162	3300031770	Soil	MRHLIGVALAIVMAAAVFFAASWGYLTLLIGPARTGVLPAGGGSLIH
Ga0318543_101597452	3300031777	Soil	MRHLVGVMLAIVMAAALYFAASWGYLKLLIGPAGVGRLPAGGGSLLHNHAVLEGFGALLGVA
Ga0318498_103240281	3300031778	Soil	MRHLAGVVLAVVMAAAVFFAASWGYLKLLILPAGSGALPVGGGSLLH
Ga0318547_106403041	3300031781	Soil	MRHLLGVILAIVLAVAVFFAASWGYLKLLIGPTGLSGTLPAGGGSLLH
Ga0318552_101148942	3300031782	Soil	MRHLVGVMLAIVMAAALYFAASWGYLKLLIGPAGVGRLPAGGGSLLHNHAVLEGFGALLGGFGLP
Ga0318523_104045982	3300031798	Soil	MRHLIGVALAIVMAAAVYFAASWGYLKLLIGPARAGVLPAGGGSLIHDHAVLEGFGVLLA
Ga0318565_105018681	3300031799	Soil	MRHLVGVGLAIAWAAVVFFAASWGYVKLLIGPAGSGALPAGGGSLLHNHAV
Ga0318511_102896641	3300031845	Soil	MRHLVGLMLAIIMAAALYFAASWGYLKLLIGPAGLGRLPAGGGSLLHDHAVLE
Ga0318544_102650821	3300031880	Soil	MRHLIGVALAIVMAAAVYFAASWGYLKLLIGPARAGVLPAGGGSLIHD
Ga0306923_123326921	3300031910	Soil	MDMRHLVGVGLAIAWAAVVFFAASWGYVKLLIGPAGSGALPAGGGSLLHNHAVLE
Ga0318562_105227572	3300032008	Soil	MRHLIGVGLAMVMAAAVFFAASWGYLKLLTGPARSGVLPAGGGTLIHDHAVVEGF
Ga0318556_104754002	3300032043	Soil	MDMRHLVGVGLAIAWAAVVFFAASWGYVKLLIGPAGSGALPAGGGSLLHNHAVLEGFGVL
Ga0318524_101268731	3300032067	Soil	MRHLIGVALAIVMAAAVFFAASWGYLTLLIGPARTGVLPAAGGSLIHN
Ga0318553_102032882	3300032068	Soil	MRHLIGVALAIVMAAAVFFAASWSYLKLLIGPARTGVLPAGGGSL
Ga0311301_104750061	3300032160	Peatlands Soil	MRHLVGVVLAIVLAAAVFFAASWGYLKLLIGPTPPGTLPGGGGSLLHNHA
Ga0307470_102414641	3300032174	Hardwood Forest Soil	MRHLVGVMLAIVMAAAVFFAASWGYLKLLIGPAGLGRLPAGGGSL
Ga0306920_1026198911	3300032261	Soil	MRHLVGVMLAIIMAAALYFAASWGYLKLLIGPAGLGRLPAGGGSLVHNHAVIEGFGA
Ga0334804_053767_1_150	3300033818	Soil	MRHLVGVLLAIVMAAVVFFAASWGYLKLLSGAGRPGALPANGGSLLHHRT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049772

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences