Metagenome Family F049519

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049519
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	79 residues
Representative Sequence	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA
Number of Associated Samples	106
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.56 %
% of genes near scaffold ends (potentially truncated)	25.34 %
% of genes from short scaffolds (< 2000 bps)	78.08 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.945 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.041 % of family members)
Environment Ontology (ENVO)	Unclassified (40.411 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.959 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.43% β-sheet: 22.94% Coil/Unstructured: 59.63%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00300	His_Phos_1	8.22
PF00501	AMP-binding	5.48
PF12680	SnoaL_2	3.42
PF02223	Thymidylate_kin	3.42
PF01261	AP_endonuc_2	3.42
PF09720	Unstab_antitox	2.74
PF03572	Peptidase_S41	2.05
PF00248	Aldo_ket_red	2.05
PF16930	Porin_5	2.05
PF00302	CAT	2.05
PF01451	LMWPc	1.37
PF13533	Biotin_lipoyl_2	1.37
PF13620	CarboxypepD_reg	1.37
PF13495	Phage_int_SAM_4	0.68
PF13537	GATase_7	0.68
PF01797	Y1_Tnp	0.68
PF13424	TPR_12	0.68
PF14534	DUF4440	0.68
PF00005	ABC_tran	0.68
PF04932	Wzy_C	0.68
PF01048	PNP_UDP_1	0.68
PF09656	PGPGW	0.68
PF02541	Ppx-GppA	0.68
PF13302	Acetyltransf_3	0.68
PF05235	CHAD	0.68
PF13474	SnoaL_3	0.68
PF05016	ParE_toxin	0.68
PF03976	PPK2	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	3.42
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	2.05
COG4845	Chloramphenicol O-acetyltransferase	Defense mechanisms [V]	2.05
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.37
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.68
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.68
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.68
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.68
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.68
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.68
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.95 %
Unclassified	root	N/A	2.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.95 %
Unclassified	root	N/A	2.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.95 %
Unclassified	root	N/A	2.05 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.34 %
Unclassified	root	N/A	2.05 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.42 %
Unclassified	root	N/A	2.05 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.42 %
Unclassified	root	N/A	2.05 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.42 %
Unclassified	root	N/A	2.05 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.42 %
Unclassified	root	N/A	2.05 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.42 %
Unclassified	root	N/A	2.05 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_12972283	All Organisms → cellular organisms → Bacteria → Acidobacteria	1505	Open in IMG/M
3300004156\|Ga0062589_101371713	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300004480\|Ga0062592_102122096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005167\|Ga0066672_10356340	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300005171\|Ga0066677_10050488	All Organisms → cellular organisms → Bacteria → Acidobacteria	2079	Open in IMG/M
3300005174\|Ga0066680_10260503	All Organisms → cellular organisms → Bacteria → Acidobacteria	1103	Open in IMG/M
3300005181\|Ga0066678_10493397	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300005187\|Ga0066675_10230376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300005289\|Ga0065704_10392168	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300005294\|Ga0065705_10386386	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300005294\|Ga0065705_10469490	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300005295\|Ga0065707_10105166	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300005353\|Ga0070669_100106443	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300005440\|Ga0070705_100317142	All Organisms → cellular organisms → Bacteria → Acidobacteria	1124	Open in IMG/M
3300005444\|Ga0070694_100111549	All Organisms → cellular organisms → Bacteria → Acidobacteria	1949	Open in IMG/M
3300005444\|Ga0070694_100262869	All Organisms → cellular organisms → Bacteria → Acidobacteria	1310	Open in IMG/M
3300005444\|Ga0070694_101457355	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300005444\|Ga0070694_101801469	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300005445\|Ga0070708_100025615	All Organisms → cellular organisms → Bacteria	5044	Open in IMG/M
3300005445\|Ga0070708_100529062	All Organisms → cellular organisms → Bacteria → Acidobacteria	1112	Open in IMG/M
3300005445\|Ga0070708_100635751	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300005446\|Ga0066686_10117669	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300005447\|Ga0066689_10267463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300005467\|Ga0070706_100003539	All Organisms → cellular organisms → Bacteria	15353	Open in IMG/M
3300005467\|Ga0070706_100037201	All Organisms → cellular organisms → Bacteria	4495	Open in IMG/M
3300005467\|Ga0070706_100409825	All Organisms → cellular organisms → Bacteria → Acidobacteria	1262	Open in IMG/M
3300005468\|Ga0070707_101214494	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300005471\|Ga0070698_100965981	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300005471\|Ga0070698_101450851	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300005536\|Ga0070697_100001471	All Organisms → cellular organisms → Bacteria	17920	Open in IMG/M
3300005536\|Ga0070697_101673976	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300005545\|Ga0070695_101236480	Not Available	615	Open in IMG/M
3300005546\|Ga0070696_100101427	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300005549\|Ga0070704_100516998	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300005549\|Ga0070704_101914553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005556\|Ga0066707_10565519	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300005557\|Ga0066704_10973084	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300005844\|Ga0068862_100675002	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300005844\|Ga0068862_101924754	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300006034\|Ga0066656_10349042	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300006796\|Ga0066665_10551666	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300006797\|Ga0066659_10834555	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300007255\|Ga0099791_10005217	All Organisms → cellular organisms → Bacteria	5346	Open in IMG/M
3300007255\|Ga0099791_10681621	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300007258\|Ga0099793_10278836	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300007265\|Ga0099794_10038672	All Organisms → cellular organisms → Bacteria → Acidobacteria	2261	Open in IMG/M
3300009012\|Ga0066710_100765127	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300009012\|Ga0066710_100925127	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300009012\|Ga0066710_101950558	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300009038\|Ga0099829_10241679	All Organisms → cellular organisms → Bacteria → Acidobacteria	1470	Open in IMG/M
3300009088\|Ga0099830_10332270	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300009088\|Ga0099830_11202919	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300009088\|Ga0099830_11778328	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300009089\|Ga0099828_10035121	All Organisms → cellular organisms → Bacteria	4072	Open in IMG/M
3300009089\|Ga0099828_10764082	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300009089\|Ga0099828_10800989	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300009089\|Ga0099828_11007919	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300009089\|Ga0099828_11097428	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300009089\|Ga0099828_11143944	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300009090\|Ga0099827_10080624	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300009090\|Ga0099827_10219070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1589	Open in IMG/M
3300009090\|Ga0099827_11515382	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300009137\|Ga0066709_100027154	All Organisms → cellular organisms → Bacteria	5961	Open in IMG/M
3300010043\|Ga0126380_11072940	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300010046\|Ga0126384_10000838	All Organisms → cellular organisms → Bacteria	17715	Open in IMG/M
3300010047\|Ga0126382_10067735	All Organisms → cellular organisms → Bacteria → Acidobacteria	2174	Open in IMG/M
3300010362\|Ga0126377_12661046	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010399\|Ga0134127_11335015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	787	Open in IMG/M
3300010400\|Ga0134122_12393172	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010400\|Ga0134122_12749715	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300011003\|Ga0138514_100057766	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300011269\|Ga0137392_10064144	All Organisms → cellular organisms → Bacteria → Acidobacteria	2806	Open in IMG/M
3300011269\|Ga0137392_11397388	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300011269\|Ga0137392_11435474	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300011270\|Ga0137391_10475107	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300011270\|Ga0137391_10792544	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300011271\|Ga0137393_10550688	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300012096\|Ga0137389_10484957	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300012189\|Ga0137388_10199072	All Organisms → cellular organisms → Bacteria → Acidobacteria	1804	Open in IMG/M
3300012189\|Ga0137388_10362693	All Organisms → cellular organisms → Bacteria → Acidobacteria	1338	Open in IMG/M
3300012202\|Ga0137363_10184038	All Organisms → cellular organisms → Bacteria → Acidobacteria	1665	Open in IMG/M
3300012202\|Ga0137363_11536351	Not Available	557	Open in IMG/M
3300012203\|Ga0137399_10368825	All Organisms → cellular organisms → Bacteria → Acidobacteria	1194	Open in IMG/M
3300012203\|Ga0137399_11033214	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300012205\|Ga0137362_10019540	All Organisms → cellular organisms → Bacteria	5190	Open in IMG/M
3300012207\|Ga0137381_10127199	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300012207\|Ga0137381_10748155	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300012210\|Ga0137378_10000185	All Organisms → cellular organisms → Bacteria → Acidobacteria	42033	Open in IMG/M
3300012350\|Ga0137372_10024077	All Organisms → cellular organisms → Bacteria → Acidobacteria	5659	Open in IMG/M
3300012354\|Ga0137366_10053285	All Organisms → cellular organisms → Bacteria → Acidobacteria	3102	Open in IMG/M
3300012361\|Ga0137360_10333687	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300012361\|Ga0137360_10658511	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300012362\|Ga0137361_10041005	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300012363\|Ga0137390_10130543	All Organisms → cellular organisms → Bacteria → Acidobacteria	2491	Open in IMG/M
3300012363\|Ga0137390_12006958	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300012685\|Ga0137397_10000565	All Organisms → cellular organisms → Bacteria	25476	Open in IMG/M
3300012923\|Ga0137359_10277977	All Organisms → cellular organisms → Bacteria → Acidobacteria	1492	Open in IMG/M
3300012927\|Ga0137416_10327256	All Organisms → cellular organisms → Bacteria → Acidobacteria	1278	Open in IMG/M
3300012927\|Ga0137416_11680339	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300012929\|Ga0137404_10031909	All Organisms → cellular organisms → Bacteria	3904	Open in IMG/M
3300012930\|Ga0137407_10911992	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300012930\|Ga0137407_11469331	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300012944\|Ga0137410_11149879	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300012948\|Ga0126375_11870392	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300012971\|Ga0126369_11894183	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300012972\|Ga0134077_10140037	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300015069\|Ga0167633_100838	All Organisms → cellular organisms → Bacteria	9450	Open in IMG/M
3300015241\|Ga0137418_10343966	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300018028\|Ga0184608_10299845	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300018071\|Ga0184618_10237358	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300018431\|Ga0066655_10137981	All Organisms → cellular organisms → Bacteria → Acidobacteria	1429	Open in IMG/M
3300018431\|Ga0066655_11258929	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300018433\|Ga0066667_10083891	All Organisms → cellular organisms → Bacteria → Acidobacteria	2063	Open in IMG/M
3300018468\|Ga0066662_10835115	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300018468\|Ga0066662_11639262	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300018482\|Ga0066669_10094769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2054	Open in IMG/M
3300019885\|Ga0193747_1020527	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300021088\|Ga0210404_10169949	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300022534\|Ga0224452_1104614	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300025910\|Ga0207684_10001598	All Organisms → cellular organisms → Bacteria → Acidobacteria	24083	Open in IMG/M
3300025922\|Ga0207646_11087530	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300025935\|Ga0207709_10281710	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300026294\|Ga0209839_10227491	Not Available	592	Open in IMG/M
3300026298\|Ga0209236_1154363	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300026304\|Ga0209240_1233328	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300026481\|Ga0257155_1009560	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300026515\|Ga0257158_1018708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300026538\|Ga0209056_10398419	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300026540\|Ga0209376_1194321	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300026550\|Ga0209474_10211231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300026551\|Ga0209648_10778463	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300027645\|Ga0209117_1169935	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300027655\|Ga0209388_1039352	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300027671\|Ga0209588_1036643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1579	Open in IMG/M
3300027678\|Ga0209011_1221999	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300027846\|Ga0209180_10283014	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300027862\|Ga0209701_10339006	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300027882\|Ga0209590_10028764	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300027882\|Ga0209590_10804735	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300028380\|Ga0268265_10679107	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300028536\|Ga0137415_10253049	All Organisms → cellular organisms → Bacteria → Acidobacteria	1570	Open in IMG/M
3300031720\|Ga0307469_10054678	All Organisms → cellular organisms → Bacteria	2536	Open in IMG/M
3300031740\|Ga0307468_100010096	All Organisms → cellular organisms → Bacteria	3643	Open in IMG/M
3300032180\|Ga0307471_100627929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300032180\|Ga0307471_103284044	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300032205\|Ga0307472_101459233	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.89%
Host-Associated	Host-Associated	4.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.84%
Plants	Host-Associated → Plants	4.11%
Aquatic	Environmental → Aquatic	2.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.74%
Sediment	Environmental → Aquatic → Sediment	2.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.37%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.34%
Loam	Environmental → Terrestrial → Soil → Loam	17.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.37%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.05%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015069	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4C, Ice margin, adjacent to proglacial lake	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0339.00002470	2162886013	Switchgrass Rhizosphere	MNAKQIALPFRARRSRRLANTNVDLIGRSYKEDYSTVTVILLCPNDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA
Ga0062589_1013717131	3300004156	Soil	LPFRAKRSRRPASSNADLIGRSYEEDYSTVTVVSLCANDDSRVMVRRDPGGRTFSMPAWLMRLIFIEQEGKRAA*
Ga0062592_1021220961	3300004480	Soil	KKSRRPASSNADLIGRSYEEDYSTVTVVSLCANDDSRVMVRRDPGGRTFSMPAWLMRLIFIEQEGKRAA*
Ga0066672_103563402	3300005167	Soil	MSTKQIALPFRIRQRAPGKNPNADLIGRSYEEDYSTITVVGVCLNNERRVMVRREPGGNTWSMPAWLMRLIFLEKKGKREA*
Ga0066677_100504881	3300005171	Soil	MSTKQIALPFRIRQRAPEKNPNADLIGRSYEEDYSTITVVGVCLNDERRVMVRREPGGNTWSMPAWLMRLIFLEKKGKRAA*
Ga0066680_102605033	3300005174	Soil	MNTRQIAFPFRLQRTGRRRNPNADLIGRSYEEGYATVTVTGICLNDDGRVMVRREPGGSTWSMPGWLMRLIFLEKKGKRAA*
Ga0066678_104933972	3300005181	Soil	MNSRQIALPLPSKKSDRVDPNADLIGCSYEGYSTVTVIGTCLNDNRRVILRREPGSSSWSMPSWLVRLIFIEKKGKRAA*
Ga0066675_102303762	3300005187	Soil	MSTKQIALPFRIRQRAPGKNPNADLIGRSYEEDYSTITVVGVCLNDERRVMVRREPGGNTWSMPAWLMRLIFLEKKGKRAA*
Ga0065704_103921681	3300005289	Switchgrass Rhizosphere	MNAKQIALPFRARRSRRLANTNVDLIGRSYKEDYSTVTVILLCPNDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0065705_103863863	3300005294	Switchgrass Rhizosphere	PFRAIRARRSRRLANTNVDLIGRSYKEDYSTVTVILLCPNDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0065705_104694901	3300005294	Switchgrass Rhizosphere	MSTKQIALPFRAGRPRPGKNSNSELIGRSYEEDYSTVTVVAVCANDESRVMVRRDPGGRTWSMPAWLMRLVFLEQKGKRAA*
Ga0065707_101051665	3300005295	Switchgrass Rhizosphere	MNAKQIALPFRAIRARRSRRLANTNVDLIGRSYKEDYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFM
Ga0070669_1001064434	3300005353	Switchgrass Rhizosphere	MNAQQIALPFRTKRSRRPASSNADLIGRSYEEDYSTVTVVSLCANDRSRVMVRRDPGGRTFSMPAWLMRLIFIEQEGKRAA*
Ga0070705_1003171422	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPLLPKRSRRPANNNVDLIGRSYKEDYSTVTVISLCANDESRVMVRRDPDGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0070694_1001115491	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSTKQIALPFRTRKPRRKNTSNTDLIGRWYEEDHSTVTVVGTCPSDESRMMVRRDPGGRVWSMPAWLMRLIFLEQKGKRAA*
Ga0070694_1002628691	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPFRAIRARRSRRLANTNVDLIGRSYKEDYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0070694_1014573551	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPLLPKRSRRPANNNVDLIGRSYQENYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0070694_1018014691	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNAQQIAFPFRAKKSRRPASSNADLIGRSYEEDYSTVTVVSLCANDDSRVMVQRDPGGRTFSMPAWLMRLIFIEQEGKRAA*
Ga0070708_1000256153	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAAEQITFPFCAPRAERRRNPDIDLIGRSYQEDQATVTVIGFCLNDDTRVMVRREPGGSTWSMPAWLMRMIFLEKKRKRAA*
Ga0070708_1005290621	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKQIAFPFRMKRTEQRRNPNVDLIGRSYLEDHATVTVVGFCLNDDSRVMVRRDPGGSTWSMPAWLMRLIFMEKKRKRAA*
Ga0070708_1006357512	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIAFPFRAKRPKRRENPNVDLIGRSYHDDYATVTVIGSCLNDESRVMVRREPGGRTWSMPAWLMRLIFMEKKRKRAA*
Ga0066686_101176692	3300005446	Soil	MNTRQIALPLPSKRADSTDPNADLIGRSYEEGYSTVTVIGSCLNDKRRVMLRRDPGGSNWSMPSWLVRLIFLEKKGERAA*
Ga0066689_102674631	3300005447	Soil	MNTRQIALPLPSKRADGTDPNADLIGRSYEEGYSTVTVIGSCLNDHRRVMLRRDPGGGNWSMPSWLVRLIFLEKKGRRAA*
Ga0070706_1000035398	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKQIAFPFRMKRTEQRRNPNVDLIGRSYLEDHATVTVVGFCLNDDSRVMLRRDPGGSTWSMPAWLMRLIFMEKKRKRAA*
Ga0070706_1000372015	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFIEQEGRRAA*
Ga0070706_1004098251	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KSRRPANTNVDLIGRSYQENYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0070707_1012144941	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKQIAFPFRMKRTEQRRNPNVDLIGRSYLEDHATVTVVGFCLNDDSRVMVRRDAGGSTWSMPAWLMRLIFMEKKRKRAA*
Ga0070698_1009659812	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPLLPKRSRRLANTNVDLIGRSYQENYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0070698_1014508511	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIAFPFRAKRPKRRENPNVDLIGRSYHDDYATVTVIGFCLNDESRVMVRREPGGRTWSMPAWLMRLIFMEKKRKRAA*
Ga0070697_1000014711	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNTRQIALPLPSKKSDRDDPNADLIGRSYEEGYSTVTVIGTCLNDNRRVMLRREPGSSSWSIPSWLVRLIFIEKKGKRAA
Ga0070697_1016739761	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSTKQIALPFRAGRPRPGKNSNFELIGRSYEEDYSTVTVVALCANDESRVMVRRDPGGRTWSMPAWLMRLVFLEQKGKRAA*
Ga0070695_1012364801	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPFRAKRSRRPASTNVDLIGCSYQEDHSTVTVISLCANDEGRVMVRRDPGGRTFSMPAWLMR
Ga0070696_1001014275	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPLLPKRSRRPANNNVDLIGRSYKEDYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0070704_1005169983	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KQIALPFRRKRKEPRKNSNYDLIGRSYEDDHTTVTVTGLCLNDDSRVMLRRDPGGATWSMPAWLTRLIFMEQRGKRAA*
Ga0070704_1019145532	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RSRRLANTNVDLIGRSYQENYSRVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0066707_105655192	3300005556	Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGICLNDDGRVMVRREPGGSTWSMPGWLMRLIFLEKKGKRAA*
Ga0066704_109730841	3300005557	Soil	RAKRTARPVNSHVDLIGRWYKDDLGRVTVIGLCTNDDGRVMVRRYPGGSTWSMPAWLMRLIFMEKKKRKRAA*
Ga0068862_1006750022	3300005844	Switchgrass Rhizosphere	MNAQQIAFPFRAKKSRRLASNNADLIGRSYEEDYSTVTVVSLCANDDSRVMVRRDPGGRTFSMPAWLMRLIFIEQEGKRAA*
Ga0068862_1019247542	3300005844	Switchgrass Rhizosphere	MNAKQIALPLLPKRSRRLANTNVDLIGRSYKEDYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA*
Ga0066656_103490421	3300006034	Soil	MNTRQIALPLPSKRADSTDPNADLIGRSYEEGYSTVTVIGSCLNDKRRVMLRRDPGGSNWSMPSWLGRLIFLEKKGERAA*
Ga0066665_105516662	3300006796	Soil	MNKRQIVLPLPSKKSDRDDPNADLIGRSYEEGYSTVTVTGTCLNDNRRVMLRREPGSSSWSMPSWLVRLIFIEKKGKRAA*
Ga0066659_108345552	3300006797	Soil	MNAEQIAFPFRPKRTEWLGNPNIDLIGRSYEEDHATVTVIGFCLNDDSRVMVRRDPGGNAWSMPAWLMRLIFMEKKRKRAA*
Ga0099791_100052173	3300007255	Vadose Zone Soil	MNTRQIAFPFRLQRTGRRRNPNADLIGRSYEEGYATVIVTGLCLNDDGRVMVRREPGGGIWSMPGWLMRLIFLEKKGKRAA*
Ga0099791_106816211	3300007255	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0099793_102788361	3300007258	Vadose Zone Soil	MNAKQIALPFRARRNPRSANTHVDLIGRSYEEDYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0099794_100386722	3300007265	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPAWLMRLIFLEKKGKRAA*
Ga0066710_1007651271	3300009012	Grasslands Soil	MNTRQIALPLPSKRADGTDPNADLIGRSYEEGYSTVTVIGSCLNDHRRVMLRRDPRGSNWSMPSWLVRLIFLEKKGRRAA
Ga0066710_1009251272	3300009012	Grasslands Soil	MNAKQIAFPFRAKRTEWPGNPNIDLIGRSYEEDHATVTVIGFCLNDESRVMVRREPGGSTWSMPTWLMRLIFMEKKRKRAA
Ga0066710_1019505582	3300009012	Grasslands Soil	MNKRQIVLPLPSKKSDRDDPNADLIGRSYEEGYSTVTVTGTCLNDNRRVMLRREPGSSSWSMPSWLVRLIF
Ga0099829_102416793	3300009038	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSTWSMPGWLMRLIFLEKKGKRAA*
Ga0099830_103322702	3300009088	Vadose Zone Soil	MNTKQITLPFRLKQTERRRNLNVDLIGRSYEEDYATVTVTGRCLNDDSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA*
Ga0099830_112029191	3300009088	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSTVTVVSLCANDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGKRAA*
Ga0099830_117783282	3300009088	Vadose Zone Soil	ALNCEVHMSKRQIALPFRLKKSRRPRNPSVDLIGRSYEEDYATVTVTGLCLNDDSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA*
Ga0099828_100351216	3300009089	Vadose Zone Soil	QIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPAWLMRLIFLEKKGKRAA*
Ga0099828_107640822	3300009089	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEVYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0099828_108009892	3300009089	Vadose Zone Soil	MKAKQITFPFRAKKAEQRKSPNIDLIGRAYEEDRATVTVIGFCLNDDGRVMVRREPGGSTWSMPAWLMRLIFLEKKRKRAA*
Ga0099828_110079191	3300009089	Vadose Zone Soil	MSTRQITLPFRLKRAERRRNPNVDLIGRSYEQGYATVTVTGLCLNDNSRVMVRREPGGSTWSMPAWLMRLIFL
Ga0099828_110974281	3300009089	Vadose Zone Soil	MSKRQIALPFRLKKSRRPRNPSVDLIGRSYEEDYATVTVTGLCLNDDSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA*
Ga0099828_111439442	3300009089	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA*
Ga0099827_100806242	3300009090	Vadose Zone Soil	MSTRQITLPFRLKRAERRRNPNVDLIGRSYEQGYATVTVTGLCLNDNSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA*
Ga0099827_102190702	3300009090	Vadose Zone Soil	MNTRQIAFPFRLQRTGRRNPNADLIGRSYEEGYATVIVTGLCLNDDGRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA*
Ga0099827_115153821	3300009090	Vadose Zone Soil	MNTKQITLPFRLKRTERRRNLNVDLIGRSYEEDYATVTVTGVCLNDDSRVLVRREPGGRTWSMPAWLMRLIFLDKKGKRAA*
Ga0066709_1000271544	3300009137	Grasslands Soil	MNTRQIALPLPSKRADGTAPNADLIGRSYEEGYSTVTVIGSCLNDHRRVMLRRDPRGSNWSMPSWLVRLIFLEKKGRRAA*
Ga0126380_110729402	3300010043	Tropical Forest Soil	MNTRQIALPLPFKKGDTSDPNLDLIGRWYEDDYSTVTVTGTCLNDSKRVMLRRDPAGSTWSMPAWLVRLIFIEKKGKRAA*
Ga0126384_1000083812	3300010046	Tropical Forest Soil	MKTRQIALPLPFKNADTSDPNADLIGRSYEDGYSTVTVTGTCFNNSKRVMLRRDPGDSTWSMPAWLVRLIFMEKKGKRAA*
Ga0126382_100677352	3300010047	Tropical Forest Soil	MKTRQISLPLPFKNADTSDPNADLIGRSYEDGYSTVTVTGTCFNNSKRVMLRRDPGDSTWSMPAWLVRLIFMEKKGKRAA*
Ga0126377_126610461	3300010362	Tropical Forest Soil	MNTRQIVLPLPFKKGDTSDPNLDLIGRSYEDDYSTVTVTGTCLNDSKRVMLRRDPAGSTWSMPAWLVRLIFIEKKGKRAA*
Ga0134127_113350151	3300010399	Terrestrial Soil	MNAKQIALPLLPKRSRRPANNNVDVIGRSYKEDYSTVTVISLCANDESRVMVRRDPDGRTFSMPA
Ga0134122_123931722	3300010400	Terrestrial Soil	MRDRQITLPFRARQKKAVNPNVDLIGRSYKEGYSTVTVVETCLNDESRVMLRKDPGGSTWSMPAWLVRLIFTEKKRKRAA*
Ga0134122_127497152	3300010400	Terrestrial Soil	MRNSQITLPLRARQKKQVNPNVDLIGRSYKEGYSTVTVVETCLNDDSRVMLRKDPGGSTWSMPAWLVRLIFTEKKQKRAA*
Ga0138514_1000577661	3300011003	Soil	MNAKQIALPFRAKRSRRPANNNADLIGRSYEEDYSTVTVVSLCANDRNRVMVRRDPGGRTFSMPAWLMRLIFIEQEGKRAA*
Ga0137392_100641444	3300011269	Vadose Zone Soil	MNKKQITLPFRLRKTERRRNPNADLIGRSYEQGYATVTVTGVCLNDDSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA*
Ga0137392_113973882	3300011269	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTGLCLNDDGRVMVRREPGGSIWSMPAWLMRLIFLEKKG
Ga0137392_114354742	3300011269	Vadose Zone Soil	MNAKQIAFPFRAKRNRRSANPNVDLIGRSYEEDYSTVTVVSLCANDDSRVMVRREPGGRTFSMPAWLMRLIFIEQEGQRAA*
Ga0137391_104751071	3300011270	Vadose Zone Soil	RRSANTHVDLIGRSYEEDYSTVTVVSLCANDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137391_107925442	3300011270	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSTVTVVSLCRHDDSRVMVRREPGGRTFSMPAWLMRLIFLEQKGKRAA*
Ga0137393_105506881	3300011271	Vadose Zone Soil	RRRNPNADLIGRSYEEGYATVTVTGLCLNDVGRVMVRREPGGSIWSMPAWLMRLIFLEKKGKRAA*
Ga0137389_104849571	3300012096	Vadose Zone Soil	AIGLRGPMNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPAWLMRLIFLEKKGKRAA*
Ga0137388_101990721	3300012189	Vadose Zone Soil	MNAKQIALPLPAKRNRRPANTHVDLIGRSYEEDYSTVTVVSLCANDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137388_103626931	3300012189	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLSDDGRVMVRREPGGSIWSMPGWLMRLIFLEKKGKR
Ga0137363_101840383	3300012202	Vadose Zone Soil	MNTRQVAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPGWLMRLIFLEKKGKRAA*
Ga0137363_115363511	3300012202	Vadose Zone Soil	MNAKQIALPFRARRNRRPANTHVDLIGRSYEEDYCTVTVVSLCANDESRVMVRRDPGGRTFSMPAW
Ga0137399_103688252	3300012203	Vadose Zone Soil	MNAKQIALPFCAKRNRRPADTHADLIGRSYEEGYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137399_110332141	3300012203	Vadose Zone Soil	SMNAKQIAFPFRAKRTKRRENPNVDLIGRSYHDDYATVTVIGFCLNDESRVMVRREPGGRTWSMPAWLMRLIFMEKKRRRAA*
Ga0137362_100195404	3300012205	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPGWLMRLIFLEKKGKRAA*
Ga0137381_101271993	3300012207	Vadose Zone Soil	MESTLREVYMNTRQIALPLPFRKSEVGDPNSDLIGRSYEEGYSTVRVIGNCLNDNRRVMLRRDPGGSTWSMPPG*
Ga0137381_107481552	3300012207	Vadose Zone Soil	MNTRQIVLPLPSKKSDRDDPNADLIGRSYEEGYSTVTVTGTCLNDNRRVMLRREPGSSSWSMPSWLVRLIFIEKKGKRAA*
Ga0137378_1000018524	3300012210	Vadose Zone Soil	MNAKQIAFPFHGKRERRKNPNIDLIGRSYEEDHATVTVIGFCLNDDSRVMVRREPGGSIWSMPVWLMRLVFMENKRKRAA*
Ga0137372_100240773	3300012350	Vadose Zone Soil	MNAKQIAFPFHGKRERRKNPNIDLIGRSYEEDHATVTVIGFCLNDDSRVMVRREPGGSIWSMPVWLMRLVFMEKKRKSAA*
Ga0137366_100532851	3300012354	Vadose Zone Soil	MNAKQIAFPFHGKRERRKNPNIDLIGRSYEEDHATVTVIGFCLNDDSRVMVRREPGGSIWSMPVWLMRLVFMEKKRKRAA*
Ga0137360_103336873	3300012361	Vadose Zone Soil	MNAKQITLPFRAKRNRRPANTNVDLIGRSYEEDYCTVTVVSLCANDESRVMMRRDPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137360_106585112	3300012361	Vadose Zone Soil	MNAKQIALPFRAKRNRRPADTHADLIGRSYEEGYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137361_100410055	3300012362	Vadose Zone Soil	MNTRQITFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPGWLMRLIFLEKKGKRAA*
Ga0137390_101305431	3300012363	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHADLIGRSYEEDYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGKRAA*
Ga0137390_120069581	3300012363	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSTVTVVSLCANDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGR
Ga0137397_100005659	3300012685	Vadose Zone Soil	MNAKQIALPFRARRNRRSADTHADLIGRSYEEDYSTVTVVSLCANDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137359_102779773	3300012923	Vadose Zone Soil	MNAKQITLPFRAKRNRRPANTSVDLIGRSYEEEYSTVTVVSLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137416_103272561	3300012927	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSMVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137416_116803391	3300012927	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDSRVMVRREPGGSTWSMPGWLMRLIFLEKKGKRAA*
Ga0137404_100319093	3300012929	Vadose Zone Soil	MNAKQIALPFRAKRNRRPADTHADLIGRSYEEEYSTVTVVALCRNDDSRVMVRRDPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137407_109119921	3300012930	Vadose Zone Soil	MNTRQIALPLPSKRADRTDPNADLIGRSYEEGYSTVAVIGSCLNDNRRVMLRRDPGGSNWSMPSWLVRLIFLEKKGRRAA*
Ga0137407_114693311	3300012930	Vadose Zone Soil	MNAKQIALPFRAKRNRRSANTHVDLIGRSYEEDYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0137410_111498792	3300012944	Vadose Zone Soil	FRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLYLNDDGRVMVRREPGGSIWSMPGWLMRLIFLEKKGKRAA*
Ga0126375_118703921	3300012948	Tropical Forest Soil	MNTRQIVLPLPFKKGDTSDRNLDLIGRSYEDDYSTVTVTGTCLNDSKRVMLRRDPAGSTWSMPAWLVRLIFIEKKGKRAA*
Ga0126369_118941832	3300012971	Tropical Forest Soil	MAELHSIARGIMSTKQIALPFRRKRRAPRKNPNYDLIGRSYDEDYSTVTVTGLCLSDDSRVMVRRDPSGAIWSMPAWLMRLIFLEQKGKRAA*
Ga0134077_101400371	3300012972	Grasslands Soil	MNSRQIALPLPSKKSDRVDPNADLIGCSYEEGYSTVTVIGTCLNDNRRVILRREPGSSSWSMPSWLVRLIFIEKKGKRAA*
Ga0167633_1008384	3300015069	Glacier Forefield Soil	MNTRQIALPFRAKRIDRKDANVDLIGRSYDEDDATVTVIAVSANDDGRVIVRRDPGGSTWSMPAWLMRLIFLEKKRRRAA*
Ga0137418_103439663	3300015241	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDHSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA*
Ga0184608_102998451	3300018028	Groundwater Sediment	MKAKQITLPFRLRGNRRPANSNSDLIGRSYEEDHSTVTVVSVCLNDDSRVMVRRDPGGRTFSMPAWLMRLIFIEHEGRRA
Ga0184618_102373581	3300018071	Groundwater Sediment	MNAKQIALPFRAKRSRRPANTNVDLIGRSYEEDYSAVTVIALCANDDSRVMVRRDPGGRTFSMPAWLMRLIFIEQEGRRAA
Ga0066655_101379811	3300018431	Grasslands Soil	MSTKQIALPFRIRQRAPGKNPNADLIGRSYEEDYSTITVVGVCLNDERRVMVRREPGGNTWSMPAWLMRLIFLEKKGKRAA
Ga0066655_112589292	3300018431	Grasslands Soil	MNSRQIALPLPSKKSDRVDPNADLIGCSYEGYSTVTVIGTCLNDNRRVILRREPGSSSWSMPSWLVRLIFIEKKGKRAA
Ga0066667_100838911	3300018433	Grasslands Soil	GLMSTKQIALPFRIRQRAPGKNPNADLIGRSYEEDYSTITVVGVCLNDERRVMVRREPGGNTWSMPAWLMRLIFLEKKGKRAA
Ga0066662_108351152	3300018468	Grasslands Soil	MNTRQIAFPFRLQRTGRRRNPNADLIGRSYEEGYATVTGICLNDDGRVMVRREPGGSTWSMPGWLMRLIFLEKKGKRAA
Ga0066662_116392622	3300018468	Grasslands Soil	MNKRQIVLPLPSKKSDRDDPNADLIGRSYEEGYSTVTVIGTCLNDNRRVMLRREPGSSSWSMPSWLERLIFIEKKGKRAA
Ga0066669_100947692	3300018482	Grasslands Soil	MSTKQIALPFRIRQRAPEKNPNADLIGRSYEEDYSTITVVGVCLNDERRVMVRREPGGNTWSMPAWLMRLIFLEKKGKRAA
Ga0193747_10205273	3300019885	Soil	MNAKQIALPFRAKTNRRTANSNVDLIGRSYEEDYSTVTVVSLCRNDDSRVMVRREPGDRTFSMPA
Ga0210404_101699491	3300021088	Soil	MNKKQIALPFRFKRTEQRSNRHTDLIGRSYEEGYATVTVTGLCLNDDSRVMVRREPGGSTWSMPAWLMRLIFL
Ga0224452_11046141	3300022534	Groundwater Sediment	MKAKQITLPFRLRGNRRPANSNSDLVGRSYEEDHSTVTVVSVCLNDDSRVMVRRDPGGRTFSMPAWLMRLIFIEHEGRRAA
Ga0207684_100015987	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSTVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFIEQEGRRAA
Ga0207646_110875301	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKQIAFPFRMKRTEQRRNPNVDLIGRSYLEDHATVTVVGFCLNDDSRVMVRRDAGGSTWSMPAWLMRLIFMEKKRKRAA
Ga0207709_102817102	3300025935	Miscanthus Rhizosphere	MSTKQIALPFRTRKPRRKNTSNTDLIGRWYEEDHSTVTVVGICPSDESRMMVRRDPGGRVWSMPAWLMRLIFLEQKGKRAA
Ga0209839_102274911	3300026294	Soil	MNKNQIALPFRFNRTERRSNRHTDLIGRSYEEGYATVTVTGLCLNDDSRVMVRREPAGSTWSMPAWL
Ga0209236_11543631	3300026298	Grasslands Soil	VYMNTRQIVLPLPSKKSDRDDPNADLIGRSYEEGYSTVTVIGTCLNDNRRVMLRREPGSSSWSMPSWLVRLIFIEKKGKRAA
Ga0209240_12333281	3300026304	Grasslands Soil	MNKKQIALPFRFKRTEQRSNRHTDLIGRSYEEGYATVTVTGICLNDDSRVMVRREPGGSTWSMPGWLMRLIFLERKGKRAA
Ga0257155_10095603	3300026481	Soil	MNKKQITLPFRLRKTERRRNPNADLIGRSYEQGYATVTVTGVCLNDDSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA
Ga0257158_10187081	3300026515	Soil	MNKKQIALPFRFKRTEQRSNRHTDLIGRSYEEGYATVTVTGLCLNDDSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA
Ga0209056_103984192	3300026538	Soil	MNTRQIAFPFRLQRTGRRRNPNADLIGRSYEEGYATVTVTGICLNDDGRVMVRREPGGSTWSMPGWLMRLIFLETKGKRAA
Ga0209376_11943213	3300026540	Soil	PLPSKRADGTDPNADLIGRSYEEGYSTVTVIGSCLNDHRRVMLRRDPRGSNWSMPSWLVRLIFLEKKGRRAA
Ga0209474_102112312	3300026550	Soil	MSTKQIALPFRIRQRAPETNPNADLIGRSYEEDYSTITVVGVCLNDERRVMVRREPGGNTWSMPAWLMRLIFLEKKGKRAA
Ga0209648_107784631	3300026551	Grasslands Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGDATVTVTGLCLNDDGRVMVRREPGGGTWSMPAWLMRLIFLEKKGKRAA
Ga0209117_11699352	3300027645	Forest Soil	MNAKQIALPLRTKRNRRSANTHVDLIGRSYEEDYSTVTVVSLCANDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA
Ga0209388_10393521	3300027655	Vadose Zone Soil	MNTRQIAFPFRLQRTGRRRNPNADLIGRSYEEGYATVIVTGLCLNDDGRVMVRREPGGGIWSMPGWLMRLIFLEKKGKRAA
Ga0209588_10366432	3300027671	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPAWLMRLIFLEKKGKRAA
Ga0209011_12219991	3300027678	Forest Soil	AERRRDPNVDLIGRSYEQGYASVTVTGLCLNDESRVMVRREPGGSTWSMPAWLMRLIFLEKNGKRAA
Ga0209180_102830142	3300027846	Vadose Zone Soil	MNTRQIAFPFRLKRTGRRRNPNADLIGRSYEEGYATVTVTGLCLNDDGRVMVRREPGGSIWSMPGWLMRLIFLEKKGKRAA
Ga0209701_103390061	3300027862	Vadose Zone Soil	MNTKQITLPFRLKQTERRRNLNVDLIGRSYEEDYATVTVTGRCLNDDSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA
Ga0209590_100287643	3300027882	Vadose Zone Soil	MSTRQITLPFRLKRAERRRNPNVDLIGRSYEQGYATVTVTGLCLNDNSRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA
Ga0209590_108047351	3300027882	Vadose Zone Soil	MNTRQIAFPFRLQRTGRRNPNADLIGRSYEEGYATVIVTGLCLNDDGRVMVRREPGGSTWSMPAWLMRLIFLEKKGKRAA
Ga0268265_106791071	3300028380	Switchgrass Rhizosphere	PFRTKRSRRPASSNADLIGRSYEEDYSTVTVVSLCANDRSRVMVRRDPGGRTFSMPAWLMRLIFIEQEGKRAA
Ga0137415_102530491	3300028536	Vadose Zone Soil	MNAKQIALPFRARRNRRSANTHVDLIGRSYEEDYSMVTVVSLCRNDDSRVMVRREPGGRTFSMPAWLMRLIFMEQEGRRAA
Ga0307469_100546781	3300031720	Hardwood Forest Soil	LPSKKSDRDDPNADLIGRSYEEGYSTVTVIGTCLNDNRRVMLRREPGSSSWSIPSWLVRLIFIEKKGKRAA
Ga0307468_1000100963	3300031740	Hardwood Forest Soil	MNAKQIALPLNPKRSRRVANTNADLTGRSYQEEYSTVTVISLCANDESRVMVRRDPGGRTFSMPAWLMRLIFMDQEGRRAA
Ga0307471_1006279291	3300032180	Hardwood Forest Soil	LAREVYMNTRQIALPLPSKKSDRDDPNADLIGRSYEEGYSTVTVIGTCLNDNRRVMLRREPGSSSWSIPSWLVRLIFIEKKGKRAA
Ga0307471_1032840441	3300032180	Hardwood Forest Soil	MNRKQIVLPLPFSVTDAGDPNADLIGRSYEEGYSTVTVIGTCLNDNRRVMLRRDPEGSTWSMPT
Ga0307472_1014592331	3300032205	Hardwood Forest Soil	GSSPREVHMRDRQITLPFRARPKKRASPNLDLIGRSYKEGYSTVTVVETCLNDDSRVMLRKDPGASTWTMPAWLVRLIFTEKKRRRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences