Metagenome Family F049490

Basic Information
Family ID	F049490
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	44 residues
Representative Sequence	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNA
Number of Associated Samples	112
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.32 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.84 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (79.452 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.452 % of family members)
Environment Ontology (ENVO)	Unclassified (45.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.110 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1prs_02204570 2N55_08906060 3AP72_2010_repI_A100DRAFT_10611962 4JGI1027J12803_1016583074 5JGI12053J15887_100519981 6Ga0062386_1017109132 7Ga0062595_1016035323 8Ga0062595_1016475962 9Ga0066869_101173032 10Ga0066388_1052336231 11Ga0066689_106253912 12Ga0070698_1019539412 13Ga0066697_103457241 14Ga0070693_1012396402 15Ga0066695_109097741 16Ga0066694_102379821 17Ga0066903_1017371731 18Ga0066903_1023789691 19Ga0066903_1035056004 20Ga0066903_1042362013 21Ga0066903_1089751241 22Ga0079221_115181891 23Ga0079220_111425641 24Ga0099793_102198872 25Ga0066710_1047779781 26Ga0099828_119626831 27Ga0105247_112470712 28Ga0099792_103331832 29Ga0114129_121720931 30Ga0114129_121934132 31Ga0116118_11002492 32Ga0126384_111127901 33Ga0126384_124865241 34Ga0126382_102016531 35Ga0126382_105577271 36Ga0126382_107547131 37Ga0126382_125407031 38Ga0126373_105472603 39Ga0134063_102497532 40Ga0074046_107687581 41Ga0126372_113622382 42Ga0126378_105981951 43Ga0126377_125724771 44Ga0126379_138281402 45Ga0134128_120673111 46Ga0134124_118157901 47Ga0126383_101286061 48Ga0124844_12224732 49Ga0137393_100799304 50Ga0137363_116826491 51Ga0137362_116729101 52Ga0137378_113134631 53Ga0137377_111048371 54Ga0137377_116747931 55Ga0137371_101205981 56Ga0137385_115110762 57Ga0137361_113142592 58Ga0137416_113343081 59Ga0164303_107621652 60Ga0164303_109876602 61Ga0164302_110086271 62Ga0164304_108824433 63Ga0164305_120967031 64Ga0157378_128025632 65Ga0157372_131413681 66Ga0157380_128232591 67Ga0132258_110081451 68Ga0132256_1029328963 69Ga0132255_1002094866 70Ga0182033_108721911 71Ga0182033_114483422 72Ga0182033_121511751 73Ga0182035_110296562 74Ga0182035_110631171 75Ga0182032_113572422 76Ga0182032_113941811 77Ga0182034_111377951 78Ga0182034_114925771 79Ga0182037_101138424 80Ga0182037_116580482 81Ga0182039_113146991 82Ga0210407_102504891 83Ga0210406_111187271 84Ga0213872_102890102 85Ga0210389_114107523 86Ga0207692_106360881 87Ga0209803_12613661 88Ga0209648_104544181 89Ga0209331_11597021 90Ga0209799_11019601 91Ga0209465_102311371 92Ga0307296_106341382 93Ga0318516_103548701 94Ga0318571_101974691 95Ga0318542_103100121 96Ga0318574_103324681 97Ga0318574_107118193 98Ga0318560_104776082 99Ga0306917_102067973 100Ga0318493_106808182 101Ga0306918_102322391 102Ga0306918_110520953 103Ga0318502_101853551 104Ga0318502_103379872 105Ga0318537_102584602 106Ga0318509_103090802 107Ga0318509_104406631 108Ga0318543_102369761 109Ga0318552_104212991 110Ga0318567_102882251 111Ga0310917_107635022 112Ga0318517_103375452 113Ga0318517_105544211 114Ga0318511_104918591 115Ga0306925_111713081 116Ga0306921_120077141 117Ga0306921_127796942 118Ga0310912_109737682 119Ga0310916_112857672 120Ga0310916_113998232 121Ga0310913_104018301 122Ga0310913_105156802 123Ga0310913_110176151 124Ga0310910_103769123 125Ga0310909_100862744 126Ga0310909_107926913 127Ga0306926_101930254 128Ga0306926_113717391 129Ga0306926_119527812 130Ga0318531_100248191 131Ga0306922_115946352 132Ga0318507_103862201 133Ga0318507_105040552 134Ga0310911_101952981 135Ga0318559_105997072 136Ga0318549_105633441 137Ga0318532_101206252 138Ga0318504_101529602 139Ga0306924_113252351 140Ga0306924_117726332 141Ga0318518_104551711 142Ga0318540_105925181 143Ga0306920_1021511581 144Ga0306920_1032379291 145Ga0310914_103763083 146Ga0310914_106578034
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1prs_02204570 2N55_08906060 3AP72_2010_repI_A100DRAFT_10611962 4Ga0062386_1017109132 5Ga0062595_1016475962 6Ga0066869_101173032 7Ga0066388_1052336231 8Ga0066689_106253912 9Ga0070698_1019539412 10Ga0066697_103457241 11Ga0066695_109097741 12Ga0066694_102379821 13Ga0066903_1017371731 14Ga0079220_111425641 15Ga0116118_11002492 16Ga0126384_124865241 17Ga0126372_113622382 18Ga0137363_116826491 19Ga0137362_116729101 20Ga0137361_113142592 21Ga0164303_107621652 22Ga0164303_109876602 23Ga0164302_110086271 24Ga0164304_108824433 25Ga0132258_110081451 26Ga0132256_1029328963 27Ga0182033_108721911 28Ga0182033_121511751 29Ga0182035_110296562 30Ga0306918_110520953 31Ga0318502_103379872 32Ga0310914_106578034
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42 1Ga0318517_103375452 2N55_08906060 3JGI1027J12803_1016583074 4Ga0062595_1016035323 5Ga0066388_1052336231 6Ga0070698_1019539412 7Ga0066697_103457241 8Ga0070693_1012396402 9Ga0066695_109097741 10Ga0066694_102379821 11Ga0066903_1017371731 12Ga0066903_1035056004 13Ga0079221_115181891 14Ga0079220_111425641 15Ga0066710_1047779781 16Ga0099828_119626831 17Ga0105247_112470712 18Ga0116118_11002492 19Ga0126384_124865241 20Ga0126382_105577271 21Ga0074046_107687581 22Ga0126372_113622382 23Ga0126377_125724771 24Ga0134128_120673111 25Ga0134124_118157901 26Ga0126383_101286061 27Ga0137363_116826491 28Ga0137362_116729101 29Ga0137378_113134631 30Ga0137416_113343081 31Ga0164303_107621652 32Ga0164305_120967031 33Ga0157380_128232591 34Ga0132258_110081451 35Ga0132255_1002094866 36Ga0182033_108721911 37Ga0182033_114483422 38Ga0182033_121511751 39Ga0182035_110296562 40Ga0182032_113941811 41Ga0182034_114925771 42Ga0182037_101138424 43Ga0210407_102504891 44Ga0210406_111187271 45Ga0209803_12613661 46Ga0209331_11597021 47Ga0307296_106341382 48Ga0318574_103324681 49Ga0306917_102067973 50Ga0306918_110520953 51Ga0318502_103379872 52Ga0318517_105544211 53Ga0306921_120077141 54Ga0306921_127796942 55Ga0310913_105156802 56Ga0310910_103769123 57Ga0310909_107926913 58Ga0306926_113717391 59Ga0310911_101952981 60Ga0318549_105633441 61Ga0306924_113252351 62Ga0310914_106578034
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 0.00% Coil/Unstructured: 57.14%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01381	HTH_3	3.42
PF13560	HTH_31	2.05
PF01402	RHH_1	0.68
PF00343	Phosphorylase	0.68
PF16363	GDP_Man_Dehyd	0.68
PF09722	Xre_MbcA_ParS_C	0.68
PF03237	Terminase_6N	0.68
PF01370	Epimerase	0.68
PF13751	DDE_Tnp_1_6	0.68
PF07536	HWE_HK	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.68
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.68
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.68
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.45 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.45 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.45 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.03 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	35.62 %
Maricaulales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales	4.79 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.37 %
Unclassified	root	N/A	20.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.44 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	23.97 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.68 %
Maricaulaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae	4.79 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	6.85 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	22.60 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	6.85 %
Oceanicaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis	4.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Spiribacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter	0.68 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.68 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.68 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Spiribacter salinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter → Spiribacter salinus	0.68 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.68 %
Unclassified	root	N/A	20.55 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	11.64 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	6.16 %
unclassified Oceanicaulis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis	4.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.68 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	11.64 %
Methylobacterium sp. E-005	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. E-005	0.68 %
Methylobacterium sp. J-072	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	5.48 %
Oceanicaulis sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	4.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Spiribacter salinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter → Spiribacter salinus	0.68 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.68 %
Unclassified	root	N/A	20.55 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02P6DMY	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
2189573000\|GPBTN7E01DDXF0	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1061196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	534	Open in IMG/M
3300000955\|JGI1027J12803_101658307	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300001661\|JGI12053J15887_10051998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter → Spiribacter salinus	2288	Open in IMG/M
3300004152\|Ga0062386_101710913	Not Available	525	Open in IMG/M
3300004479\|Ga0062595_101603532	Not Available	607	Open in IMG/M
3300004479\|Ga0062595_101647596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300005165\|Ga0066869_10117303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300005332\|Ga0066388_105233623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. E-005	658	Open in IMG/M

Showing 1 to 10 of 146 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.15%
Host-Associated	Host-Associated	6.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	1.37%
Plants	Host-Associated → Plants	6.85%
Terrestrial	Environmental → Terrestrial	91.78%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.48%
Soil	Environmental → Terrestrial → Soil	91.78%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	9.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.16%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.90%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M

Showing 1 to 10 of 112 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02204570	2070309004	Green-Waste Compost	MAQATGITAIRQLMSRGRPPKSTSPLRLAHTEFVATLAGNAPHPI
N55_08906060	2189573000	Grass Soil	MTQAAAITTAIRELMSPGRPPKSTSPVRAAHTEFVAALAANVPRPLH
AP72_2010_repI_A100DRAFT_10611962	3300000837	Forest Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHIEFVA
JGI1027J12803_1016583074	3300000955	Soil	MAQAESITTAIPELMSRGRPPKATSPVRQAHTEFI
JGI12053J15887_100519981	3300001661	Forest Soil	MAQAERITTAIRELMSRGRPLKSTSPVRAAHTEFVAALAANAPRPLHSEANS
Ga0062386_1017109132	3300004152	Bog Forest Soil	MAQAERITTAVRELMSRGEPPKSASPRAAHTELVAAIAGNPPP
Ga0062595_1016035323	3300004479	Soil	MAQAAGITRAIRQLMSRGRPPQSTTPVRQAHTEFIAALAGNVPHPI
Ga0062595_1016475962	3300004479	Soil	MAQAESITTAIRQLMSRGRPPKSTSPVRQAHTEFIAALAGNVPHPIYAGANA
Ga0066869_101173032	3300005165	Soil	MAQAKDVSTTIRELMSRGQPPKSTNPVRRAHTELVAALAGNVPHAIYADV
Ga0066388_1052336231	3300005332	Tropical Forest Soil	MAQAETISTAIRELMSRREPPKSTIRVGAAHVELVAALAGNQPIPIHVQVD
Ga0066689_106253912	3300005447	Soil	MAQAECIITAIRELMSRGLPAQSTSSVRLAYIEFVAALAGNVPRPIYADVDSEDL
Ga0070698_1019539412	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAQAECSTTAIRELMSRGQPPNSTSPARLAHTELVAALAGNIPHPIYADVDSE
Ga0066697_103457241	3300005540	Soil	MAQAECIITAIRELMSRGRPSKSMCPVRAAHTEFVAALAGN
Ga0070693_1012396402	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTENITTAIRQLMSRGRTAKSTSPVRKAHTEFVAALAGNVPHP
Ga0066695_109097741	3300005553	Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHIEFVAALAGNVPHPIYAD
Ga0066694_102379821	3300005574	Soil	MAQADCMTTAIRELMSHQSSPNAMSPVRAAHAEFVSALAANPPHPIHP
Ga0066903_1017371731	3300005764	Tropical Forest Soil	MAQAECFTTAIRELMSRGRPPKSKNPVHLAHTELVAALAGNIPDPI
Ga0066903_1023789691	3300005764	Tropical Forest Soil	MAQADCITTAIRQLMSRGRPPKSTSPVRLAHTEFIAALAGNVPHPIYAD
Ga0066903_1035056004	3300005764	Tropical Forest Soil	MAQATGITTAIRQLMSRGRPPKSTSPVRLAHTEFVAALAGNIP
Ga0066903_1042362013	3300005764	Tropical Forest Soil	MAQAECITTAIRELMSRGRRPKSRSPVRLAHTEFVAALAGNAPHPIYADVDSED
Ga0066903_1089751241	3300005764	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHTEFVAAL
Ga0079221_115181891	3300006804	Agricultural Soil	MAQAESITTAIRQLMSRGRPQKSTSPVPQAHTECIAVLAGNVPRPIYA
Ga0079220_111425641	3300006806	Agricultural Soil	MAQAAGISTAIRQLVSRGRLRKSTSTVRLAHTELIAA
Ga0099793_102198872	3300007258	Vadose Zone Soil	MAQAECIITAIRELMSRGRPPNSTSPARLAHSEFVAALAANVP
Ga0066710_1047779781	3300009012	Grasslands Soil	MAQAEHITTAIRELMSRGRTPKSTSSVRLAHIELVAALAGNVPYPIYADVDSEDLD
Ga0099828_119626831	3300009089	Vadose Zone Soil	MAQAECITTAIRELMSRGRPPSSTSPARLAHTEFVAALAANVPHP
Ga0105247_112470712	3300009101	Switchgrass Rhizosphere	MAQAERIATAIRELMSRGRPPKSTTPVRQAHTECIAALAGNIPH
Ga0099792_103331832	3300009143	Vadose Zone Soil	MAQAECIITAIRELMSRGRPPNSTSPARLAHSEFVA
Ga0114129_121720931	3300009147	Populus Rhizosphere	MAQAECITTPIRELMSRGRPPKSTSPVRLAHAEFVAALAGNVPHPIYADVDSEDLDG
Ga0114129_121934132	3300009147	Populus Rhizosphere	MAQAECISTAVRELMSRGRPPKSTSPVRLAHTEFVAALAGNI
Ga0116118_11002492	3300009637	Peatland	MAQADCVTTAIRALLTGASAKSSTNPVQAAYAEFVAALA
Ga0126384_111127901	3300010046	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFV
Ga0126384_124865241	3300010046	Tropical Forest Soil	MAQAERITTAIRELMSRGRPSKSTNRVRAAHSGLIVA
Ga0126382_102016531	3300010047	Tropical Forest Soil	MAQAECITTAIRELMSCGRPPKSTSPVRPAHIEFVAALAGNIPHPIYADV
Ga0126382_105577271	3300010047	Tropical Forest Soil	MAHAESITTAIRELMSRGRPRKSTSPVRRAHTELVAALAGNVPHAIYAAV
Ga0126382_107547131	3300010047	Tropical Forest Soil	MAQAECITTAIRELMSHGRPPKSTSPVRLAHSEFVAALAGNV
Ga0126382_125407031	3300010047	Tropical Forest Soil	MAQAECITTAIRELMSRGPLKSTNPVRLAHTEFVAVLAGNVPHLIY
Ga0126373_105472603	3300010048	Tropical Forest Soil	MAQAECITTAIRELMSCGRPRKSTSPVRLAHIEFVAALAGNIP
Ga0134063_102497532	3300010335	Grasslands Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHTEFVAA
Ga0074046_107687581	3300010339	Bog Forest Soil	MAQAERITTAVRELMSRGEPPKSASPRAAHTEVVAAIAGNPPPP
Ga0126372_113622382	3300010360	Tropical Forest Soil	MAQAECICTAIGELMSRRRPPKCTDSVRLAHIELVAALAGNVP
Ga0126378_105981951	3300010361	Tropical Forest Soil	MAQAECITTAIRELMSCGRPPKSTSPVRLAHIEFVAALGG
Ga0126377_125724771	3300010362	Tropical Forest Soil	MAQAECITTAIHELVSRGRQPKSTSPVRLAHIEFVAALAENVPHPIYA
Ga0126379_138281402	3300010366	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHTEFIAAL
Ga0134128_120673111	3300010373	Terrestrial Soil	MAQAQSITTAIRQSMSRGRPPKSTSPVRQAHTELIAALAGNVPHPIYAGADADDL
Ga0134124_118157901	3300010397	Terrestrial Soil	MAQAERIATAIRGLMSRGRPPKSTSPVRAAHAEFIAALAGNIPHPIYA
Ga0126383_101286061	3300010398	Tropical Forest Soil	MAQAKCITTAIRELMSCARPPKSTSPVRLAHIEFVAALGGNIPHAIYADVDS
Ga0124844_12224732	3300010868	Tropical Forest Soil	MAQAECITTAIRELMSRGRPAKSTSPVRLAHIEFVAALAGNIPHPIYA
Ga0137393_100799304	3300011271	Vadose Zone Soil	MAQAECIITAIRELMSRGRPPNSTSPARLAHSEFVAAL
Ga0137363_116826491	3300012202	Vadose Zone Soil	MAQAERINTAIRELMSRGRPSKSTNPVRAAHSGLIAGLPANVPHLIH
Ga0137362_116729101	3300012205	Vadose Zone Soil	MAGAERITTAIRELMSRGRPLKSTNLVRAAHTEFIVALAGNAPR
Ga0137378_113134631	3300012210	Vadose Zone Soil	MAQAGCITTAIRELMSRGRPPKSTSPVRLAHMELVAALVGNVPHPIYA
Ga0137377_111048371	3300012211	Vadose Zone Soil	MAQAECITTAIRELMSRGRPPKPSNPVRLAHTEFVA
Ga0137377_116747931	3300012211	Vadose Zone Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHIEFVAALAGNVPHPIYADIDSEDL
Ga0137371_101205981	3300012356	Vadose Zone Soil	MAQAECIATAIRELMSRGRPPKSTSPVRLAHTEFVAALAGNVPHPIYADVDSED
Ga0137385_115110762	3300012359	Vadose Zone Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHIEFVAALAGNVPHP
Ga0137361_113142592	3300012362	Vadose Zone Soil	MEVTMAQAECITTAIRELMSRGQPPNSTSPVRLAHTEFVAALAGNAPQPI
Ga0137416_113343081	3300012927	Vadose Zone Soil	MAQAESIITAIRELMSRGWPSKSTSPVRLAHTEFVVALAGNVPHPI
Ga0164303_107621652	3300012957	Soil	MAQAAGITTAIRQLMSRRRTPKSTSPVRLAHIDLVAALAGNLPGRI
Ga0164303_109876602	3300012957	Soil	MAQAAGITTAIRQLMPRRRTPKSTSPVRLAHIELI
Ga0164302_110086271	3300012961	Soil	MAQAKVVSTTIRELMSRGQPPKSTSPVRRAHTELVAA
Ga0164304_108824433	3300012986	Soil	MAQADSITTAIRQLMSRGQPPNSTSPVRAAHIEFVATLSGN
Ga0164305_120967031	3300012989	Soil	MAQAECITTATRELMSRGRPPKSTNPVRLAHTEFVTALAGTAPDPIY
Ga0157378_128025632	3300013297	Miscanthus Rhizosphere	MAQAKYVSTTIRELMSRGHPPKSTSPVRRAHTELVAAL
Ga0157372_131413681	3300013307	Corn Rhizosphere	MAQAKGVSTTIRELMSRGQPPKSTSPVRRAHTELVAALAGNVPH
Ga0157380_128232591	3300014326	Switchgrass Rhizosphere	MAQAKGVSTTIRELMSRGQPPKSTSPVRRAHTELVAALAGNVPHAIYADVDSE
Ga0132258_110081451	3300015371	Arabidopsis Rhizosphere	MAQAERIIKASRELMSRVRRPKSTSPLRLAHSELIAALAGNIPHPIYEGATADDLDDRAE
Ga0132256_1029328963	3300015372	Arabidopsis Rhizosphere	MAQAERIIKASRELMSRVRRPKSTSPLRLAHSELIAAL
Ga0132255_1002094866	3300015374	Arabidopsis Rhizosphere	MAQAESITTAIRQLMSRARPPKSTSPVRQAYTELIAALAGNAPHPIYAGANADDLDRRA
Ga0182033_108721911	3300016319	Soil	MAQAEHITTAIRELMSRGQPLKSTNGVRAAHTEFVAALAGNAPHPIRSGI
Ga0182033_114483422	3300016319	Soil	MAQAEGITTAIRELMSRGRLAKSTNPVRLAHIEFVAARWECS
Ga0182033_121511751	3300016319	Soil	MAQAENITTAIREPTSRGQRPKSTSPVRAAHTEFIAALT
Ga0182035_110296562	3300016341	Soil	MAQAERISMAIRELMSRGRPVNSTNPVRAAYTEFIAALAGNVPSPIHRDANWDSLEHHLRRVF
Ga0182035_110631171	3300016341	Soil	MAQAECITTAIRELMSCGRPPKSTSPVRPAHIEFVAAL
Ga0182032_113572422	3300016357	Soil	MAQAKCISTAIRELMSRGRPPKSTSPVRLAHTEFVAALAGNVP
Ga0182032_113941811	3300016357	Soil	MAQAECIITAIRELMSRGRPPKSTSSVHAAHTELVAAIAGNPP
Ga0182034_111377951	3300016371	Soil	MAQAESITTAIRELMSRGQPLKSTNRVRAAHTEFVAALAGNVPHPIR
Ga0182034_114925771	3300016371	Soil	MAQAECNSTAVRELMSRGRPPKSTSPVRLAHTEFVAA
Ga0182037_101138424	3300016404	Soil	MAQAECITTAIRGLMSCGGPPKSTSPVRLAHIEFVAALAGNIPHPIY
Ga0182037_116580482	3300016404	Soil	MAQAECITTAIRELMSRGRPPKSTNPVGLAHTEFVAALAGN
Ga0182039_113146991	3300016422	Soil	MAQAECIITAIRELMSRGRPPKSPSSVHAAHTELVATLA
Ga0210407_102504891	3300020579	Soil	MAQAERITTAIRELMSRGRPPTSTNPVRAAHTEFLAALAGN
Ga0210406_111187271	3300021168	Soil	MAQADSITTAIRQLMSRGQPPNSTSPVRAAHIEFVATLSGNVPH
Ga0213872_102890102	3300021361	Rhizosphere	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFVT
Ga0210389_114107523	3300021404	Soil	MAQAERITTAIRELMSRGRPPTSTNPVRAAHTEFLAAL
Ga0207692_106360881	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAQAERIATAIRELMSRGRPPKSTTPVRQAHTECIAA
Ga0209803_12613661	3300026332	Soil	MAQAECIITAIRELMSRGLPAQSTSSVRLAYIEFVAALAGNV
Ga0209648_104544181	3300026551	Grasslands Soil	MAQAECITTAIRELMSRGRPPNSTSPARLAHTELVAALAWNIPHPIYADLDSE
Ga0209331_11597021	3300027603	Forest Soil	MAQAECITTAIRQLMSRGRPPKSTSPVWAAHIEFVA
Ga0209799_11019601	3300027654	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHTELVAAL
Ga0209465_102311371	3300027874	Tropical Forest Soil	MAQAECITTAIRERMSCGGPPKSTSPVRLAHIEFVAA
Ga0307296_106341382	3300028819	Soil	MARADCMTTAIRELMSRQSAPNSMNPVRAAHAEFAGALAGNPPHSIQPDL
Ga0318516_103548701	3300031543	Soil	MAQAESITTAIRKLMSRGRPPKSTSPVRLAHTEFVAALAGNP
Ga0318571_101974691	3300031549	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFVATLAGNAPDPIYAD
Ga0318542_103100121	3300031668	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRPAHIEFVAALTGNIPH
Ga0318574_103324681	3300031680	Soil	MAQAECIITVIRELMSRGRPPQSANPVRLAHTEFVAALAGNV
Ga0318574_107118193	3300031680	Soil	MAQAECITTAIRELMSCGRPPKSTSPVRLAHIEFVAALAGNIPHAIYAD
Ga0318560_104776082	3300031682	Soil	MAQAKCITTAIRELMSRGRPPKSTNPVRLAHIELVAALAG
Ga0306917_102067973	3300031719	Soil	MAQAECITTAIRELMSRGWPPKSTNPVRLAHIEFVAALAGNVPHP
Ga0318493_106808182	3300031723	Soil	MAQAECITTAIRELMSCGRPPKSTNPVRPAHIEFVAALAGNI
Ga0306918_102322391	3300031744	Soil	MAQAECITTAIRKLMSRGRPPKSTNPVRLAQTEFVTAL
Ga0306918_110520953	3300031744	Soil	MAQAESITTAIRRLMSREAPKKFTCLVRAAHTELVAALASNP
Ga0318502_101853551	3300031747	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNAPD
Ga0318502_103379872	3300031747	Soil	MAQAESINTAIRELLSRGRPLQSTIRVRAANTEFVAALAENAPC
Ga0318537_102584602	3300031763	Soil	MAQAECITTAIRELMSRGRPPKSTNPVQLAHIELVAALAENV
Ga0318509_103090802	3300031768	Soil	MAQAECITTAIRELMSRGWPPKSTNPVRLAHIEFVAALAGNVPHPIYT
Ga0318509_104406631	3300031768	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNAPHPIYADVDSDDLEG
Ga0318543_102369761	3300031777	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPH
Ga0318552_104212991	3300031782	Soil	MAQAERITTAIRELMSRGRPPKSPSPVRLAHIEFVAALAGNVPHPI
Ga0318567_102882251	3300031821	Soil	MAQAECITTAIRELMSCGRPPKSTNPVRPAHIEFVAALAG
Ga0310917_107635022	3300031833	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHIELVAAL
Ga0318517_103375452	3300031835	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNA
Ga0318517_105544211	3300031835	Soil	MAQAGRITTAIRELMSRGRPPKSPSPVRLAHIEFVAALAGNVPHPIHADV
Ga0318511_104918591	3300031845	Soil	MAQAECITTAIRELMSCGRPPKSTSPVRPAHIEFVSALAGN
Ga0306925_111713081	3300031890	Soil	MAQAECITTAIRELMSRGWPPKSTNPVRLAHIEFVAA
Ga0306921_120077141	3300031912	Soil	MAQADSITTAIRQLMSRGQPPKSTNPVRGAHAEFVAALAGNAP
Ga0306921_127796942	3300031912	Soil	MAQAEHITTAIRELMSRGRPVNSTNLVRAAHTEFV
Ga0310912_109737682	3300031941	Soil	MAQAECITTAIRELMSRGRPPKSTNPVQLAHIELVAAL
Ga0310916_112857672	3300031942	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHIEFVAALAGNVPHPIYPDVDSED
Ga0310916_113998232	3300031942	Soil	MAQADSITTAIRELMSRGQPPKSTNPVRAAHAEFVAALAGNAPHRIH
Ga0310913_104018301	3300031945	Soil	MAQAECITTAIRELMSRGRPPESTVRLAHTEFVAALAGNVPQTICA
Ga0310913_105156802	3300031945	Soil	MAQAESISTAIRELLSRGRPLQSTNRVRAAHTEFIAAL
Ga0310913_110176151	3300031945	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPQPIYADVDS
Ga0310910_103769123	3300031946	Soil	MAQAEYITTAIRELMSRGEPPKSTSPVRLAHTEFVAVLAGNVPHPIYADVDSED
Ga0310909_100862744	3300031947	Soil	MAQAECITTAIRELMSRGRPAKSTSPVRLAHIEFV
Ga0310909_107926913	3300031947	Soil	MAQAERITTAIRELMSRGGPLKSKNPVRVAQAEFVAALAGNAPHPVRSD
Ga0306926_101930254	3300031954	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPHPIYAD
Ga0306926_113717391	3300031954	Soil	MAQADSITTAIRELMSRGRPLKSTNPLRVAHSEFVAALAG
Ga0306926_119527812	3300031954	Soil	MAQADSITTAIRELMSRGQPPKSTNPVRAAHAEYVA
Ga0318531_100248191	3300031981	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPHPI
Ga0306922_115946352	3300032001	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFVTALAGNI
Ga0318507_103862201	3300032025	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALA
Ga0318507_105040552	3300032025	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRPAHIEFVAALTGNIPHPIYADVDSEDLDG
Ga0310911_101952981	3300032035	Soil	MAQTNYITTAIRELMSPGRPPKSTSPVRLAHIEFIAALAGNVPYPIYANV
Ga0318559_105997072	3300032039	Soil	MAQAEYITTAIRELMSRARPPKSTSPVRRAHTEFVAALAGNAPDPIYADVDSE
Ga0318549_105633441	3300032041	Soil	MAQADSITTAIRELMSRGQPPKSTNPMRAAHAEFLA
Ga0318532_101206252	3300032051	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFV
Ga0318504_101529602	3300032063	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNAPDPIHADV
Ga0306924_113252351	3300032076	Soil	MARAECITTAIRELMSRGRPPKSTNPVRLAHTEFVAAI
Ga0306924_117726332	3300032076	Soil	MAQAECITTAIRELMSRGQPLKSTNPVWLAHIEFVAALAGNVPHPTYADV
Ga0318518_104551711	3300032090	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHIELVAALAENV
Ga0318540_105925181	3300032094	Soil	MAQAESITTAIRKLMSRGRPPKSTSPVRLAHTEFVAALAGNPPHPIRSNAY
Ga0306920_1021511581	3300032261	Soil	MAQAEHITTAIRELMSRGRPVNSTNLVRAAHTEFVAALAGNAPHPIRSDAN
Ga0306920_1032379291	3300032261	Soil	MAQAEHITTAIRELMSRGLPLKSTNRVRAAHTEFVAALAGNAPHPIRSSANWEAL
Ga0310914_103763083	3300033289	Soil	MAQAECITTAIRELMSCGRPPKSTNPVRPAHIEFVA
Ga0310914_106578034	3300033289	Soil	MAQAESITTAIRELMSRGQAAKSTNKVRAAHRNFIAAVAASA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049490

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences