Metagenome Family F049140

Basic Information
Family ID	F049140
Family Type	Metagenome
Number of Sequences	147
Average Sequence Length	50 residues
Representative Sequence	MIELATTKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Number of Associated Samples	84
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.31 %
% of genes near scaffold ends (potentially truncated)	46.94 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (65.306 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (45.578 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.068 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 12NP_02991610 2AF_2010_repII_A001DRAFT_100021268 3AF_2010_repII_A001DRAFT_100575902 4Ga0062386_1009404271 5Ga0066395_100100636 6Ga0066388_1001035501 7Ga0066388_1025431492 8Ga0066388_1052399001 9Ga0066388_1075481052 10Ga0070713_1002848883 11Ga0070711_1020682071 12Ga0066903_1000961043 13Ga0066903_1017958082 14Ga0066903_1026199583 15Ga0066903_1028535772 16Ga0066903_1083397841 17Ga0075023_1000568411 18Ga0075024_1002272702 19Ga0070712_1002934763 20Ga0079221_100956963 21Ga0126373_100026488 22Ga0126370_103684541 23Ga0126370_107260012 24Ga0126370_118828391 25Ga0126376_101928152 26Ga0126372_105911631 27Ga0126378_109155122 28Ga0126378_112228421 29Ga0126378_117152321 30Ga0126378_117821161 31Ga0126378_125609091 32Ga0126378_130843891 33Ga0126379_105360291 34Ga0126381_1000813074 35Ga0126381_1001238525 36Ga0126381_1038979911 37Ga0126381_1047811071 38Ga0124844_10175502 39Ga0126369_105129443 40Ga0182036_115846261 41Ga0182036_117001441 42Ga0182033_103608562 43Ga0182033_109563002 44Ga0182033_119349091 45Ga0182035_101772014 46Ga0182035_119089281 47Ga0182032_113227552 48Ga0182032_119141951 49Ga0182040_108070121 50Ga0182037_100712011 51Ga0187802_100278832 52Ga0187817_109285251 53Ga0187779_103663431 54Ga0187778_108799961 55Ga0187783_100665834 56Ga0187783_103810911 57Ga0187783_107174631 58Ga0187783_112593691 59Ga0187780_100485132 60Ga0187777_100745845 61Ga0187777_101098622 62Ga0187766_101088011 63Ga0187765_100028406 64Ga0187765_100891793 65Ga0187772_100401072 66Ga0187770_116908821 67Ga0210399_100673652 68Ga0210406_112050352 69Ga0126371_100802543 70Ga0126371_100832674 71Ga0126371_101275041 72Ga0126371_104050212 73Ga0126371_104332962 74Ga0126371_107784381 75Ga0126371_115017051 76Ga0228598_10087483 77Ga0224564_11337542 78Ga0207700_106291922 79Ga0207775_1141031 80Ga0207858_10123211 81Ga0207840_10263391 82Ga0207777_10591941 83Ga0207826_11298651 84Ga0209040_100231922 85Ga0318516_106222541 86Ga0310915_100690763 87Ga0310915_100712332 88Ga0310915_109381491 89Ga0310915_111441071 90Ga0318542_105593352 91Ga0318561_100963792 92Ga0318561_106952151 93Ga0318572_104418782 94Ga0310686_1002187772 95Ga0310686_1064411352 96Ga0310686_1175241861 97Ga0306917_100439773 98Ga0318501_102503943 99Ga0318501_105489012 100Ga0306918_100371763 101Ga0306918_100659762 102Ga0306918_107196391 103Ga0318509_106417762 104Ga0318521_104444481 105Ga0318546_102441301 106Ga0318508_11676581 107Ga0318508_11938422 108Ga0318548_103414721 109Ga0318550_104250241 110Ga0307473_113251272 111Ga0307473_115232091 112Ga0310917_100432874 113Ga0318512_102406572 114Ga0306919_1000001550 115Ga0306919_100223224 116Ga0306919_107715282 117Ga0306925_1001747613 118Ga0306925_101650543 119Ga0306925_103232094 120Ga0306925_104511251 121Ga0306925_106167153 122Ga0318520_106260301 123Ga0306921_103450791 124Ga0306921_115668101 125Ga0306921_124859961 126Ga0306921_127429692 127Ga0310912_100666164 128Ga0310916_101288885 129Ga0310916_104161181 130Ga0310910_100969455 131Ga0310910_102446993 132Ga0306926_115707322 133Ga0306926_116995802 134Ga0318549_102684582 135Ga0318532_101212541 136Ga0318506_105361981 137Ga0318514_102746101 138Ga0306924_103163151 139Ga0307472_1014650622 140Ga0307472_1021750262 141Ga0306920_1000835211 142Ga0306920_1001797184 143Ga0306920_1006727912 144Ga0306920_1008075671 145Ga0306920_1043940052 146Ga0310914_113812131 147Ga0310914_114438801
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 12NP_02991610 2Ga0075024_1002272702 3Ga0079221_100956963 4Ga0126370_118828391 5Ga0126372_105911631 6Ga0126378_130843891 7Ga0126381_1047811071 8Ga0182036_115846261 9Ga0182035_101772014 10Ga0182035_119089281 11Ga0182032_113227552 12Ga0187778_108799961 13Ga0187783_103810911 14Ga0187765_100891793 15Ga0187770_116908821 16Ga0207840_10263391 17Ga0318542_105593352 18Ga0318512_102406572
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50. 1Ga0066388_1001035501 2AF_2010_repII_A001DRAFT_100575902 3Ga0066388_1052399001 4Ga0066903_1083397841 5Ga0126370_118828391 6Ga0126378_109155122 7Ga0126378_117821161 8Ga0126378_130843891 9Ga0126381_1000813074 10Ga0126381_1047811071 11Ga0124844_10175502 12Ga0182035_101772014 13Ga0182035_119089281 14Ga0187779_103663431 15Ga0187783_103810911 16Ga0187783_107174631 17Ga0187777_100745845 18Ga0187766_101088011 19Ga0187765_100028406 20Ga0187765_100891793 21Ga0187770_116908821 22Ga0126371_104332962 23Ga0228598_10087483 24Ga0224564_11337542 25Ga0207775_1141031 26Ga0318508_11676581 27Ga0318506_105361981 28Ga0306920_1043940052 29Ga0310914_114438801
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.84% β-sheet: 0.00% Coil/Unstructured: 53.16%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF06078	DUF937	5.44
PF12200	DUF3597	5.44
PF03401	TctC	4.76
PF05589	DUF768	2.72
PF12071	DUF3551	2.04
PF13356	Arm-DNA-bind_3	1.36
PF12625	Arabinose_bd	1.36
PF01053	Cys_Met_Meta_PP	1.36
PF06863	DUF1254	1.36
PF08734	GYD	1.36

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	5.44
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.76
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	1.36
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.36
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.36
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	1.36
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.36
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	1.36
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	1.36
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	1.36

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.31 %
Unclassified	root	N/A	34.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.31 %
Unclassified	root	N/A	34.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.31 %
Unclassified	root	N/A	34.69 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.62 %
Unclassified	root	N/A	34.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %
Unclassified	root	N/A	34.69 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.53 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.68 %
Unclassified	root	N/A	34.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.36 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.12 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.68 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.72 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.68 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	4.08 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.68 %
Unclassified	root	N/A	34.69 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.40 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.68 %
Mameliella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Mameliella	0.68 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	4.08 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.72 %
Unclassified	root	N/A	34.69 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.40 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.68 %
Mameliella alba	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Mameliella → Mameliella alba	0.68 %
Mesorhizobium albiziae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium albiziae	0.68 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	4.08 %
Unclassified	root	N/A	34.69 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.72 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.40 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.68 %
Mameliella alba	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Mameliella → Mameliella alba	0.68 %
Mesorhizobium albiziae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium albiziae	0.68 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	4.08 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2.72 %
Unclassified	root	N/A	34.69 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459020\|G1P06HT01DG3FZ	Not Available	558	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10002126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4374	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10057590	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300004152\|Ga0062386_100940427	Not Available	715	Open in IMG/M
3300004633\|Ga0066395_10010063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3475	Open in IMG/M
3300005332\|Ga0066388_100103550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3318	Open in IMG/M
3300005332\|Ga0066388_102543149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	931	Open in IMG/M
3300005332\|Ga0066388_105239900	Not Available	658	Open in IMG/M
3300005332\|Ga0066388_107548105	Not Available	545	Open in IMG/M
3300005436\|Ga0070713_100284888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1517	Open in IMG/M

Showing 1 to 10 of 147 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.68%
Environmental	Environmental	98.64%
Host-Associated	Host-Associated	0.68%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.08%
Plants	Host-Associated → Plants	0.68%
Solid Waste	Engineered → Solid Waste	0.68%
Terrestrial	Environmental → Terrestrial	94.56%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.72%
Grass	Engineered → Solid Waste → Grass	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%
Sediment	Environmental → Aquatic → Sediment	1.36%
Soil	Environmental → Terrestrial → Soil	94.56%

Habitat	Taxonomy	Distribution
Composting	Engineered → Solid Waste → Grass → Composting	0.68%
Loam	Environmental → Terrestrial → Soil → Loam	13.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.72%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.36%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.36%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M

Showing 1 to 10 of 84 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2NP_02991610	2170459020	Switchgrass, Maize And Mischanthus Litter	MTELATAKYHNRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
AF_2010_repII_A001DRAFT_100021268	3300000793	Forest Soil	MIEVATTTHHHRLLYALVAAAGVGLGLALIAFCDAWFSGSGFSGVQFIGAR*
AF_2010_repII_A001DRAFT_100575902	3300000793	Forest Soil	MIELAKAEHHHRLLYALVAAAGVGLGLALIAFCDAWFSGSGFNGVQFIGAR*
Ga0062386_1009404271	3300004152	Bog Forest Soil	RGRPQRTEVRAMTELATAKFHRRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH*
Ga0066395_100100636	3300004633	Tropical Forest Soil	MTELATAKYHHGLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH*
Ga0066388_1001035501	3300005332	Tropical Forest Soil	MIELATTKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH*
Ga0066388_1025431492	3300005332	Tropical Forest Soil	MIELATIKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFISAN*
Ga0066388_1052399001	3300005332	Tropical Forest Soil	MIEPATTKQHHRLFYALAAAAGLGLGLALIAFWDAWSVGSGFSGVQFIAGR*
Ga0066388_1075481052	3300005332	Tropical Forest Soil	MTELATAKHHHGLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFISAH*
Ga0070713_1002848883	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIELATIKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFNGVQFIGAR*
Ga0070711_1020682071	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIELAKTKHHQRLFYALAAAAGLGLGLALIAFCDAWYSGSGFSGVQFISAR*
Ga0066903_1000961043	3300005764	Tropical Forest Soil	MTELATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFIGAR*
Ga0066903_1017958082	3300005764	Tropical Forest Soil	MTELATAKTHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFISA
Ga0066903_1026199583	3300005764	Tropical Forest Soil	MIELATSKHHHRLLYALVAAAGVGLGLALIAFCDAWFSGSGFSGVQFIGAR*
Ga0066903_1028535772	3300005764	Tropical Forest Soil	MIELAKAEHHHRLLYALVAAAGVGLGLALIAFCDAWFSGSGFNGVQFIGA
Ga0066903_1083397841	3300005764	Tropical Forest Soil	MTELATAKFRNRLFYALAAAAGLGLGLALIAFCDTWFSGSGFSGVQFISVH*
Ga0075023_1000568411	3300006041	Watersheds	MIELATIKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFS
Ga0075024_1002272702	3300006047	Watersheds	MIELAKTKHHQRLFYALAVCDAWYSGSGFSGVQLISAR*
Ga0070712_1002934763	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTELATAKYHNRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAR*
Ga0079221_100956963	3300006804	Agricultural Soil	RRAANRCAMIELATIKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFNGVQFIGAR*
Ga0126373_100026488	3300010048	Tropical Forest Soil	MTQLATTKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGVQLISAH*
Ga0126370_103684541	3300010358	Tropical Forest Soil	MIELATTKHHHRLLYALAAAAGLGLGLALIAFCDAWFTGSGFSGVQFIGVR*
Ga0126370_107260012	3300010358	Tropical Forest Soil	LTPEARAMTELATAKTHHRLFYALAAAAGLGLGLALIAFCDAWFSGNGFSGAQFISAH*
Ga0126370_118828391	3300010358	Tropical Forest Soil	RRFRGSPRSNHRYAMTQLATTKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGVQLISAH*
Ga0126376_101928152	3300010359	Tropical Forest Soil	MIELATTKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAR*
Ga0126372_105911631	3300010360	Tropical Forest Soil	HHRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGVQLISAH*
Ga0126378_109155122	3300010361	Tropical Forest Soil	MIELAKTKHHPRLFYALAAAAGLGLGLALIAFCDAWYSGSGFNGMQFISAH*
Ga0126378_112228421	3300010361	Tropical Forest Soil	MTELATAKTHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSG
Ga0126378_117152321	3300010361	Tropical Forest Soil	MTELATAKTHHRLFYALAAAAGLGLGLALIAFCDAWLSGNGFSGAQFISAH*
Ga0126378_117821161	3300010361	Tropical Forest Soil	MIELATAKHHKRLLYAFAAAAGLGLGLALIAFCDAWYSGSGVSGLQFIAAH*
Ga0126378_125609091	3300010361	Tropical Forest Soil	TELATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH*
Ga0126378_130843891	3300010361	Tropical Forest Soil	MTEMASAKTHQRLLFALAVAAGLGLGIALVTLGDAWYGGFSGVQFIGSR*
Ga0126379_105360291	3300010366	Tropical Forest Soil	TAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAR*
Ga0126381_1000813074	3300010376	Tropical Forest Soil	MIEPATAKYHHRLLYALVAAAGLGLGLALIAFCDAWFSGNGFNGAQFIGAH*
Ga0126381_1001238525	3300010376	Tropical Forest Soil	MIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGSGFSGVQFIGAH*
Ga0126381_1038979911	3300010376	Tropical Forest Soil	TKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH*
Ga0126381_1047811071	3300010376	Tropical Forest Soil	MNQISTADHNRRLLFALAVAAGLGIGLALVALFDAWYSGAGFNGAQLIAAH*
Ga0124844_10175502	3300010868	Tropical Forest Soil	MIELATTKHHRRFLYALVAATGVGLGLALIAFCDAWFSGSGFSGVQFIGAR*
Ga0126369_105129443	3300012971	Tropical Forest Soil	MTELATAKTHHRLFYALAAAAGLGLGLALIAFCDAWFSGNGFSGAQFISAH*
Ga0182036_115846261	3300016270	Soil	TGKHHHRLLFALAVAAGLGLGLALVAFCDAWYGGFSGVQFIGAH
Ga0182036_117001441	3300016270	Soil	MIELATTKHHRRLLYALAADAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0182033_103608562	3300016319	Soil	MIDLATGKHHHRLLFALAVAAGLGLGLALVAFCDAWYGGFNGVQFIGAH
Ga0182033_109563002	3300016319	Soil	MTELTTIKHHQRLLYALAAAAGLDLGLALIAFCDAWFSGSGFSGVQFISAR
Ga0182033_119349091	3300016319	Soil	EARAMTELATAKTHHRLFYALAAAAGLGLGLALIAFCDGWFSGSGFSGVQFISAH
Ga0182035_101772014	3300016341	Soil	PIPGSPRSQQRRRAMIDLATGKHHHRLLFALAVAAGLGLGLALVAFCDAWYGGFSGVQFIGAH
Ga0182035_119089281	3300016341	Soil	QQNIGAAMQVELTSTKHQHRHRLLFALAAAAGLGLGLALIAFFDAWYSGSGLTGMQVIGA
Ga0182032_113227552	3300016357	Soil	MIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSG
Ga0182032_119141951	3300016357	Soil	MTELATAKYHHGLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAR
Ga0182040_108070121	3300016387	Soil	MTELATTKNHHRLLYALAAAAGLGLGLALIAFCDA
Ga0182037_100712011	3300016404	Soil	VPPHRTEVRAMTELATAKTHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFISA
Ga0187802_100278832	3300017822	Freshwater Sediment	MIELTTTKHQHRHRLLFALAAAAGLGLGLALIAFCDAWYSGSGFSGMQVIGAH
Ga0187817_109285251	3300017955	Freshwater Sediment	MIELPTAKHHHRLLFALAVAAGLGLGLALVAFCDAWYGGFSGVQFIGAH
Ga0187779_103663431	3300017959	Tropical Peatland	MTEPATAKHHQRLLFALAVAAGLGLGLALVAFCDAWYGGFNGVQFIDTR
Ga0187778_108799961	3300017961	Tropical Peatland	MTQQTTVKHHRFLFALAVAAGLGLGLALVAFCDAWYGGFSG
Ga0187783_100665834	3300017970	Tropical Peatland	MTEQATVKHHGFLFALAVAAGLGLGLALVAFCDAWYGGFSGVQFIGAH
Ga0187783_103810911	3300017970	Tropical Peatland	MIDLAAGKHHHRLLFAFAVAAGLGLGLALVAFCDAWYGGFSGVCWRSLIEFDVE
Ga0187783_107174631	3300017970	Tropical Peatland	MIELATTKHQHRHRLLFALAAAAGLGLGLALIAFFDAWYSGSGFSGMQVIGAH
Ga0187783_112593691	3300017970	Tropical Peatland	MIELTTTKHQHRHRFLFALAAAAGLGLGLALIAFCDAWYSGSGFSGMQVIGAH
Ga0187780_100485132	3300017973	Tropical Peatland	MIDLATGKHHHRLLFALAVAAGLGLGLALVAFCDAWYGGFSGVQFIGAH
Ga0187777_100745845	3300017974	Tropical Peatland	MAELATARFHHRLFYALAAAAGLGLGLALIALCDAWFSGSGFSGVQFIGAH
Ga0187777_101098622	3300017974	Tropical Peatland	MIDLAAGKHHHRLLFAFAVAAGLGLGLALVAFCDAWYGGFSGVQFVGAH
Ga0187766_101088011	3300018058	Tropical Peatland	MTQQTTVKHHRFLFALAVAAGLGLGLALVAFCDAWYGGFSGVQFIGAH
Ga0187765_100028406	3300018060	Tropical Peatland	MIDTATTKNHQRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGVPFIGAH
Ga0187765_100891793	3300018060	Tropical Peatland	MIEQAAAKHHRRLLYALAVAAGLGLGLALVALCDAWYGGFSGVQFVATH
Ga0187772_100401072	3300018085	Tropical Peatland	MTEPATAKHHQRLLFALAVAAGLGLGLALVAFCDAWYGGFNGVQFIDTH
Ga0187770_116908821	3300018090	Tropical Peatland	LAGLDSGESAMNQTPTADHNRRFLFALAVAAGLGLGLALVALCDALYSGSGFSGMQFVGA
Ga0210399_100673652	3300020581	Soil	MIELATIKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFISAN
Ga0210406_112050352	3300021168	Soil	IFRGFPRSKDRCAMIELATTKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFISAN
Ga0126371_100802543	3300021560	Tropical Forest Soil	MTELATAKFRNRLFYALAAAAGLGLGLALIAFCDTWFSGSGFSGVQFISVH
Ga0126371_100832674	3300021560	Tropical Forest Soil	MTELATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFIGAR
Ga0126371_101275041	3300021560	Tropical Forest Soil	MIEPATAKYHHRLLYALVAAAGLGLGLALIAFCDAWFSGNGFNGAQFIGAH
Ga0126371_104050212	3300021560	Tropical Forest Soil	MTELATAKTHHRLFYALAAAAGLGLGLALIAFCDAWFSGNGFSGAQFISAH
Ga0126371_104332962	3300021560	Tropical Forest Soil	MTELATAKTHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFISAR
Ga0126371_107784381	3300021560	Tropical Forest Soil	AMAELATGKTHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFISAH
Ga0126371_115017051	3300021560	Tropical Forest Soil	MIELATGKHHRRLLYALAAAAGLGLGLALIAFCDAWYSGSG
Ga0228598_10087483	3300024227	Rhizosphere	MIQLATGKPHRRLLFALAVAAGLGLGLALVAFCDAWYSGFSGVQFIGAR
Ga0224564_11337542	3300024271	Soil	ARAMIEPATAKHHRRLLFALAVAAGLGLGLALVAFCDAWYSGFSGVQFIGAH
Ga0207700_106291922	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIELATIKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFNGVQFIGAR
Ga0207775_1141031	3300026817	Tropical Forest Soil	MTELATAKFHSRFLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0207858_10123211	3300026909	Tropical Forest Soil	MTELATAKFYHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0207840_10263391	3300026910	Tropical Forest Soil	MTELATAKFHSRFLYALAAAAGLGLGLVLIAFCDAWFSGSGING
Ga0207777_10591941	3300027330	Tropical Forest Soil	MTEQATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0207826_11298651	3300027680	Tropical Forest Soil	MIEQATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0209040_100231922	3300027824	Bog Forest Soil	MTELATAKFHRRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0318516_106222541	3300031543	Soil	LATAKFHSRFLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0310915_100690763	3300031573	Soil	MTELATTKNHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0310915_100712332	3300031573	Soil	MIELATTKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0310915_109381491	3300031573	Soil	IELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGSGFSGVQFIGAH
Ga0310915_111441071	3300031573	Soil	HQRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGLQFISTH
Ga0318542_105593352	3300031668	Soil	PFSGFVARKHRCVMIELATAKHHHRLFYAFAAAGGLGLGLALIAFCDAWYSGSGFSGVQFIGAH
Ga0318561_100963792	3300031679	Soil	MIELATIKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0318561_106952151	3300031679	Soil	MTELATAKTHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0318572_104418782	3300031681	Soil	MTELTTTKHHQRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQ
Ga0310686_1002187772	3300031708	Soil	MIEPATAKHHRRLLFALAVAAGLGLGLALVAFCDAWYSGFSGVQFIGAH
Ga0310686_1064411352	3300031708	Soil	MIEPATAEHHRRLLFALAVAAGLGLGLALVAFCDAWYSGFSGVQFIGAH
Ga0310686_1175241861	3300031708	Soil	MIELATAKHHHRLLFALAVAAGLGLGLALVAFCDAWYGGFNGVQFIGAH
Ga0306917_100439773	3300031719	Soil	MTELTTTKHHQRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFISAR
Ga0318501_102503943	3300031736	Soil	MIELATIKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFIGAR
Ga0318501_105489012	3300031736	Soil	MIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGNGFS
Ga0306918_100371763	3300031744	Soil	MIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGSGFSGVQFIGAH
Ga0306918_100659762	3300031744	Soil	MTELATAKFYHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAQ
Ga0306918_107196391	3300031744	Soil	ATTKNHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0318509_106417762	3300031768	Soil	MTELATAKFHSRFLYALAAAAGLGLGLALIAFCDAWFS
Ga0318521_104444481	3300031770	Soil	LATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGSGFSGVQFIGAH
Ga0318546_102441301	3300031771	Soil	MIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAW
Ga0318508_11676581	3300031780	Soil	CVMIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGSGFSGVQLISAH
Ga0318508_11938422	3300031780	Soil	MIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGNGFSGVQFI
Ga0318548_103414721	3300031793	Soil	MTELATAKTHHRLFYALAAAAGLGLGLSLIAFCDAWFSGSGFSGVQFISAHWIERD
Ga0318550_104250241	3300031797	Soil	ARAMTELATAKFHSRFLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0307473_113251272	3300031820	Hardwood Forest Soil	PAATEVRPMTELATAKYHNRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAR
Ga0307473_115232091	3300031820	Hardwood Forest Soil	MTELATAKYHNRLLYALAAAAGLGLGLALIAFCDAW
Ga0310917_100432874	3300031833	Soil	MTELATAKFHHRLFYALAAAAGLGLGLALIAICDAWFSGSGFSGMQFIGAR
Ga0318512_102406572	3300031846	Soil	MTELATTKNHNRLLYALAAAAGLGLGLALIAFCDA
Ga0306919_1000001550	3300031879	Soil	MTQLATTKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGVQLISAH
Ga0306919_100223224	3300031879	Soil	MIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGNGFSGVQFIGAH
Ga0306919_107715282	3300031879	Soil	MTELATAKTHHRLFYALAAAAGLGLGLALIAFCDGWFSGSGFSGVQFISAH
Ga0306925_1001747613	3300031890	Soil	TELATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFIGAR
Ga0306925_101650543	3300031890	Soil	MTELATAKTHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFISAH
Ga0306925_103232094	3300031890	Soil	HRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0306925_104511251	3300031890	Soil	HRCAMTELATTKNHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0306925_106167153	3300031890	Soil	TELLAMTELATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAR
Ga0318520_106260301	3300031897	Soil	TELATAKFYHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0306921_103450791	3300031912	Soil	RPFSGFVARNHRCVMIELATAKHHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFGGVQFISAH
Ga0306921_115668101	3300031912	Soil	CVMIELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGSGFSGVQFIGAH
Ga0306921_124859961	3300031912	Soil	MTDLATAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0306921_127429692	3300031912	Soil	AKFYHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0310912_100666164	3300031941	Soil	MTELANAKPHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGA
Ga0310916_101288885	3300031942	Soil	KHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0310916_104161181	3300031942	Soil	HHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0310910_100969455	3300031946	Soil	MTELATAKTHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFISAH
Ga0310910_102446993	3300031946	Soil	TAKFHHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGMQFIGAR
Ga0306926_115707322	3300031954	Soil	FSGFVARKHRCVMIELATAKHHHRLFYAFAAAGGLGLGLALIAFCDAWYSGSGFSGVQFIGAH
Ga0306926_116995802	3300031954	Soil	PHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0318549_102684582	3300032041	Soil	RFRGSPRSNHRYAMTQLATTKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGVQLISAH
Ga0318532_101212541	3300032051	Soil	RRRRFRGSPRSNHRYAMTQLATTKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGVQLISAH
Ga0318506_105361981	3300032052	Soil	TKLATAKFYHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0318514_102746101	3300032066	Soil	MTQLATTKHHHRLLYALAAAAGLGLGLALIALCDAWY
Ga0306924_103163151	3300032076	Soil	MTELATAKFHSRFLYALAAAAGLGLGLALIAFCDAWFSG
Ga0307472_1014650622	3300032205	Hardwood Forest Soil	MIELATIKHHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFSGMPFIGPH
Ga0307472_1021750262	3300032205	Hardwood Forest Soil	TIKHHHRLLYALAAAAGLGLGLALIALCDAWYSGSGFNGVQFIGAH
Ga0306920_1000835211	3300032261	Soil	ARAMTELATAKTHHRLFYALAAAAGLGLGLALIAFCDGWFSGSGFSGVQFISAH
Ga0306920_1001797184	3300032261	Soil	IELATAKHHHRLFYAFAAAAGLGLGLALIAFCDAWYSGNGFSGVQFIGAH
Ga0306920_1006727912	3300032261	Soil	MTELATAKYHHGLLYALAAAAGLGLGLALIALCDAWFSGSGFSGVQFIGAH
Ga0306920_1008075671	3300032261	Soil	SKHRCAMTELATTKNHHRLLYALAAAAGLGLGLALIAFCDAWFSGSGFNGVQFIGAH
Ga0306920_1043940052	3300032261	Soil	MTELASPKQHQRLLYALAAAAGLGLGLALIALCDAWYSGSGFSGLQ
Ga0310914_113812131	3300033289	Soil	THHRLFYALAAAAGLGLGLALIAFCDAWFSGSGFSGVQFIGAH
Ga0310914_114438801	3300033289	Soil	CAMTELTTIKHHQRLLYALAAAAGLDLGLALIAFCDAWFSGSGFSGVQFISAR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049140

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences