NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F049091

Metagenome Family F049091

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049091
Family Type Metagenome
Number of Sequences 147
Average Sequence Length 74 residues
Representative Sequence VITLPPIFFYAIGTLLVVFGALRAVVLGRRRADRELTEDTPERAKARKRHKAMGIVWVLMGAFLIASTAGILGRH
Number of Associated Samples 127
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 62.59 %
% of genes near scaffold ends (potentially truncated) 34.01 %
% of genes from short scaffolds (< 2000 bps) 85.03 %
Associated GOLD sequencing projects 117
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.422 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.286 % of family members)
Environment Ontology (ENVO) Unclassified
(36.735 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.939 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110
1JGI11615J12901_107300052
2Ga0055433_100554691
3Ga0062593_1008299152
4Ga0062590_1023382882
5Ga0063356_1042840981
6Ga0063356_1048377142
7Ga0062595_1016554741
8Ga0066395_100008132
9Ga0066395_101642892
10Ga0062591_1021538161
11Ga0062594_1010910331
12Ga0070676_100271212
13Ga0070683_1002559182
14Ga0070690_1000054242
15Ga0070670_1000678792
16Ga0066388_1018418192
17Ga0068869_1002805301
18Ga0070682_1018296062
19Ga0068868_1017933511
20Ga0070689_1002764091
21Ga0070689_1011215451
22Ga0070675_1010749182
23Ga0070688_1001698181
24Ga0070659_1014134882
25Ga0070667_1004339891
26Ga0070694_1012360722
27Ga0070681_115716521
28Ga0070685_112229802
29Ga0070684_1015673811
30Ga0068853_1001968762
31Ga0070664_1010986191
32Ga0070664_1024026442
33Ga0068857_1024849541
34Ga0068856_1013667952
35Ga0068864_1014422332
36Ga0066903_1087828402
37Ga0074470_100260282
38Ga0074470_105436092
39Ga0068870_111649572
40Ga0081455_106883541
41Ga0066651_106919081
42Ga0075422_101276832
43Ga0097621_1006454461
44Ga0097621_1021664631
45Ga0068871_1001029013
46Ga0068871_1012242502
47Ga0068871_1018052262
48Ga0068871_1023733722
49Ga0079222_121118602
50Ga0075425_1025249392
51Ga0068865_1014491232
52Ga0079219_108191902
53Ga0105237_125418512
54Ga0105347_10268361
55Ga0105252_100158122
56Ga0126376_107778642
57Ga0126377_102762072
58Ga0126379_121262031
59Ga0134127_124691841
60Ga0134122_108276702
61Ga0134122_108384042
62Ga0134121_102802982
63Ga0134121_104863332
64Ga0134123_125781092
65Ga0137325_11329201
66Ga0137436_11130912
67Ga0137443_11708082
68Ga0137432_10874672
69Ga0137457_13315162
70Ga0137319_10642162
71Ga0150985_1207905712
72Ga0137367_100791492
73Ga0157305_102745401
74Ga0157293_103149682
75Ga0157288_101199652
76Ga0157295_104114162
77Ga0157308_100633772
78Ga0157298_101268172
79Ga0164300_109312781
80Ga0164308_102663443
81Ga0164307_101662402
82Ga0164306_103678261
83Ga0157374_115482811
84Ga0075351_11195202
85Ga0163163_109954441
86Ga0157379_119768171
87Ga0157376_101445842
88Ga0132258_125418123
89Ga0132258_134326592
90Ga0132256_1001816093
91Ga0132255_1001145612
92Ga0132255_1031832001
93Ga0184624_102812911
94Ga0184625_105339771
95Ga0184628_100024095
96Ga0184628_100257652
97Ga0190271_100129832
98Ga0066669_111451412
99Ga0066669_122325482
100Ga0173482_107786532
101Ga0173482_107988171
102Ga0173479_101872821
103Ga0193692_10894032
104Ga0210380_100713942
105Ga0222622_100143913
106Ga0222622_102493082
107Ga0222622_107759582
108Ga0247746_10958082
109Ga0247688_10159182
110Ga0247673_10664561
111Ga0247660_10031273
112Ga0207697_100286782
113Ga0207688_102669342
114Ga0207680_104780281
115Ga0207707_115577572
116Ga0207649_113422662
117Ga0207650_100163222
118Ga0207701_101151612
119Ga0207704_115779232
120Ga0207661_106798762
121Ga0207651_101204462
122Ga0207640_101145571
123Ga0207639_106648542
124Ga0207641_113353111
125Ga0207648_108482332
126Ga0207676_108603412
127Ga0207675_1000814592
128Ga0209971_11702411
129Ga0209998_101870581
130Ga0209465_100023091
131Ga0207428_100034516
132Ga0247684_10232291
133Ga0268265_106725272
134Ga0307280_101637102
135Ga0307503_104365571
136Ga0307296_101622102
137Ga0307506_102265302
138Ga0310887_109569352
139Ga0310813_113670852
140Ga0310813_114466592
141Ga0307469_124985942
142Ga0318551_106620782
143Ga0310897_100163451
144Ga0310906_109281752
145Ga0310906_113693782
146Ga0318533_113785882
147Ga0310889_107722192
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 50.49%    β-sheet: 0.00%    Coil/Unstructured: 49.51%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070VITLPPIFFYAIGTLLVVFGALRAVVLGRRRADRELTEDTPERAKARKRHKAMGIVWVLMGAFLIASTAGILGRHCytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
45.6%54.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Natural And Restored Wetlands
Soil
Sediment (Intertidal)
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Hardwood Forest Soil
Soil
Natural And Restored Wetlands
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
5.4%14.3%4.1%3.4%4.1%3.4%3.4%4.1%3.4%3.4%3.4%4.1%4.1%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11615J12901_1073000523300000953SoilVITLPPVFFYAIGTLLVVFGALRFAVLGRRRADRELSEDTPERAKARKRHLLMGGIWVGMGVMLILTGAGILGPHR*
Ga0055433_1005546913300004025Natural And Restored WetlandsVSLPPIFFYAIGTLLVVFGALRVVVLGRRRADRELSEDTPERAKGRRRHTVWGVIWVLMGAFLIASTAGILGRR*
Ga0062593_10082991523300004114SoilVTLPPLFFYAMGTMLIVFGAARAIVLGRRHPDREMTEDTPDRAKARRRHRIMGVVFVLMGTFLIASTAGILGGKR*
Ga0062590_10233828823300004157SoilVITLPPIFFYAIGTLLVVFGGLRIAFLGRRRADRELTADTPDRAKARRRHTIWGIIWMAMGLFLIGSTAGVLGLRH*
Ga0063356_10428409813300004463Arabidopsis Thaliana RhizosphereVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITSRR*
Ga0063356_10483771423300004463Arabidopsis Thaliana RhizosphereVITLPPLFFYAMGTMLIVFGAARAIVLGRRHPDREMTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR*
Ga0062595_10165547413300004479SoilVITLPPVFFYAIGTLLVVFGALRSAVLGRRRADRELSEDTPERAKARKRHLVMGAIWVGMGVMLILTGAGILGPHH*
Ga0066395_1000081323300004633Tropical Forest SoilVISLPPIFFYAIGTLLVVFGVMRTVVLGRRRADRELVDETPERAKARKRHFAMGIVWVLLGLFLLVSTAGILGFRL*
Ga0066395_1016428923300004633Tropical Forest SoilVITLPPIFFYAIGTLLVVFGALRTAVLGRRRADRELAEETPERARARKRHLAMGIVWLLMGAFLIVSTAGILGFGRR*
Ga0062591_10215381613300004643SoilVVQLPPLFFYAIGTLLVVFGALRTVVLGRRRPERELTEDTPERAKARRRHKIMGIVWLLMGLFLIVSTTGITGRR*
Ga0062594_10109103313300005093SoilVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDREMTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR*
Ga0070676_1002712123300005328Miscanthus RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITSRR*
Ga0070683_10025591823300005329Corn RhizosphereVITLPPIFFYAIGTLLVVFGVLRTVVLGRRRPDRELTEETPERAKARKRHKAMGIVWLLMGAFLIASTAGILGRH*
Ga0070690_10000542423300005330Switchgrass RhizosphereVITLPPVFFYAIGTLLVVFGALRFAVLGRRRADRELGEDTPERAKARKRHLLMGAIWVGMGVMLILTGAGILGPHR*
Ga0070670_10006787923300005331Switchgrass RhizosphereMNLPPIFFYAVGTAFVVFGGLRVAILGRRRAGRELTEDTPERAQTRRRHLIWGSIQVIAGLVLIASTAGVLGRR*
Ga0066388_10184181923300005332Tropical Forest SoilVITLPPVFFYAIGTLLVVFGALRAVVLGRRSADRELSEDTPERAKVRKRHLLMGVIWFGMGLMLILTGAGILGPHH*
Ga0068869_10028053013300005334Miscanthus RhizosphereVITLPPVFFYAIGTLLVVFGALRFAVLGRRRADRELGEDTPERAKARKRHLLMGAIWVGMGVMLILTGAGILG
Ga0070682_10182960623300005337Corn RhizosphereVITLPPIFFYAIGTLLVVFGALRTIVLGRRRADREVVEETPERAKARKRHKAMGIVWLLMGAFLIASTAGILGRR*
Ga0068868_10179335113300005338Miscanthus RhizosphereVVQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITSRR*
Ga0070689_10027640913300005340Switchgrass RhizosphereVTLPPIFFYVIGTLLVVFGVMRTVVLGRRRADREITDDTPERAKARRRHKLMGLIWVVMGAFLIASTAGILGRH*
Ga0070689_10112154513300005340Switchgrass RhizosphereVITLPPIFFYAIGSLLVVFGGLRVVFLGRRRADRELTDDTPERAKVRRRHTIWGIIWVAMGAFLIASTAGILGLRK*
Ga0070675_10107491823300005354Miscanthus RhizosphereVITLPPLFFYAMGTMLIVFGAARAIVLGRRRADREMTEDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKR*
Ga0070688_10016981813300005365Switchgrass RhizosphereDPAVTLPPIFFYVIGTLLVVFGVMRTVVLGRRRADREITDDTPERAKARRRHKLMGLIWVVMGAFLIASTAGILGRH*
Ga0070659_10141348823300005366Corn RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITGRR*
Ga0070667_10043398913300005367Switchgrass RhizosphereCASTSDCRSGRVDSAAFSAYAEDAVITLPPIFFYAIGTLLVVFGGLRVAFLGRRRPDRELTADTPDRAKARRRHTIWGIIWMAMGAFLIASTAGVLGLRH*
Ga0070694_10123607223300005444Corn, Switchgrass And Miscanthus RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFL
Ga0070681_1157165213300005458Corn RhizosphereVITLPPIFFYAIGTLLVVFGALRTVVLGRRRPDRELTEDTPERAKARKRHKAMGIIWLLMGAFLIASTAGILGRR*
Ga0070685_1122298023300005466Switchgrass RhizosphereVITLPPLFFYAMGTMLIVFGAARAIVLGRRHPDREMTEDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKR*
Ga0070684_10156738113300005535Corn RhizosphereFYAIGTLFVVFGGLRAIFLGRRRGDRDLADETPERAKMRRRHLVWGCIQVAAGAILIASTAGVLGMGR*
Ga0068853_10019687623300005539Corn RhizosphereMNPSLPPIFFYAIGTLLSVFGVARALTLGRRHADRELSEDTPERAKARRRHLVWGLLWAVTGVFLVVSTALHR*
Ga0070664_10109861913300005564Corn RhizosphereVTLPPIFFYVIGTLLVVFGVMRTVVLGRWRADREITDDTPERAKARRRHKLMGLIWVVMGAFLIASTVGILGRH*
Ga0070664_10240264423300005564Corn RhizosphereVITLPPIFFYAIGTLLVVFGGLRIAFLGRRRADRELTADTPDRAKARRRHTIWGTIWMAMGAFLIAST
Ga0068857_10248495413300005577Corn RhizosphereVTLPPLFFYAMGTMLIVFGTARVIVLGRRRPDREMTEDTPDRAKARRRHRIMGVVFVVMGAF
Ga0068856_10136679523300005614Corn RhizosphereVITLPPIFFYAIGTLLVVFGVLRTVVLGRRRPDRELTEETPERAKARKRHKAMGIVWLLMGAFLIASTAGILGRR*
Ga0068864_10144223323300005618Switchgrass RhizosphereVITLPPIFFYAIGTLLVVFGALRVAFLGRRRADRELTADTPDRAKVRRRHTIWGIIWVVMGAFLIASTAGILGLRK*
Ga0066903_10878284023300005764Tropical Forest SoilLLVVFGALRAVMLGRRRGDGDLDEETPKRAQARKRHLAMGIVWVLMGAFLIVSTAGVLSFRH*
Ga0074470_1002602823300005836Sediment (Intertidal)VITLPPVFFYAIGTLLVVFGALRAALLGRRRADRELTDDTPERAKVRRRHRIWGAIWVAMGAFLIASTAGILGVRH*
Ga0074470_1054360923300005836Sediment (Intertidal)VITLPPIFFYAIGTLLVVFGGLRAAMLGRRRGDRELTDDTPERAKARRRHRIWGVIWVAMGAFLIASTAGILGLRK*
Ga0068870_1116495723300005840Miscanthus RhizosphereVITLPPIFFYAIGTLLVVFGGLRVVFLGRRRADRELTGDTPERAKVRRRHTIWGIIWVAMGAFLIASTAGILGLRK*
Ga0081455_1068835413300005937Tabebuia Heterophylla RhizosphereVITLPPIFFYAIGTLLLVFGVLRAVVLGRRRADRELTEDTPERAKARKRHLAMGIVWALMGAFLIASTAG
Ga0066651_1069190813300006031SoilAVITLPPIFFYAIGTLLVVFGALRTFVLGRRRADRELVEETPERAKARKRHLAMGIVWVLMGLFLIISTAGILGLGHH*
Ga0075422_1012768323300006196Populus RhizosphereVITLPPLFFYAMGTMLIVFGTARVIVLGRRRPDRELTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR*
Ga0097621_10064544613300006237Miscanthus RhizosphereAIPAYSEGAVITLPPIFFYAIGTLLVVFGALRAVVLGRRRADRELTEETPERAKARKRHLAMGIVWLLMGLFLIFSTAGILSRR*
Ga0097621_10216646313300006237Miscanthus RhizosphereVITLPPVFFYAIGTLLVVFGAMRVAVLGRRRGDRELTADTPDRAKIRRRHKIWGLIWVAMGAFLIAST
Ga0068871_10010290133300006358Miscanthus RhizosphereGAIPAYFQSAVITLPPIFFYAIGTLLVVFGALRAVVLGRRRADRELTEETPERAKARKRHLAMGIVWLLMGLFLIFSTAGILSRR*
Ga0068871_10122425023300006358Miscanthus RhizosphereVITLPPIFFYAIGTLLVVFGGLRVAFLGRRRPDRELTADTPDRAKARRRHTIWGIIWMAMGAFLIASTAGVLGLRH*
Ga0068871_10180522623300006358Miscanthus RhizosphereVSLPPIFFYAIGTLLVVFGALRAVVLGRRRADREIVDDTPERAKTRKRHLVMGVIWVAMGVFLIASTAGILGRH*
Ga0068871_10237337223300006358Miscanthus RhizosphereMPQISLPPLFFYAIGTLLVVFGALRAVVLGRRRGDRELTEDTPERAKARKRHLAMGIVWVLMGAFLIVSTAGILGRR*
Ga0079222_1211186023300006755Agricultural SoilVITLPPIFFYAIGTLLVVFGGLRVAFLGRRRADRELTDDTPERAKVRKRHTVWGIIWVAMGAFLIASTAGILGLRK*
Ga0075425_10252493923300006854Populus RhizosphereVITLPPLFFYAIGTILVVFGALRAAILGRRRGNRELTEDTPARAKERRRHLVMGIIFVLLGLMLLGTGAGVLGPHR*
Ga0068865_10144912323300006881Miscanthus RhizosphereTLPPIFFYVIGTLLVVFGVMRTVVLGRRRADREITDDTPERAKARRRHKLMGLIWVVMGAFLIASTAGILGRH*
Ga0079219_1081919023300006954Agricultural SoilMSYPQRRDVITLPPIFFYAIGTLLVVFGSLRAVVLGRRRADRELTEDMPERAKARKRHKAMGIVWVLMGASLIASTAGILGRR*
Ga0105237_1254185123300009545Corn RhizosphereVNLPPIFFYAIGTLFVVFGGLRAIFLGRRRGDRDLADETPERAKMRRRHLVWGCIQVAAGAILIASTAGVLGMGR*
Ga0105347_102683613300009609SoilVITLPPLFFYAMGTMLIVFGAARAIVLGRRHPDREMTEDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKP*
Ga0105252_1001581223300009678SoilVITLPPLFFYAIGTMLIVFGTARAIVLGRRHPDREMTEDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKR*
Ga0126376_1077786423300010359Tropical Forest SoilVITLPPLFFYAIGTLLVVFGVLRFTVLGRRSADRELSEDTPERAKARKRHLLMGVIWVGMGVMLILTGAGILGPHH*
Ga0126377_1027620723300010362Tropical Forest SoilMPQIALPPLFFYAIGTLLVVFGALRTIMLGRRRADRELTEETPERAKARKRHFAMGIVWVLMGAFLIASTAGILGRR*
Ga0126379_1212620313300010366Tropical Forest SoilVISLPPIFFYAIGTLLVVFGVMRTVVLGRRRADRELVEETPERAKARKRHFAMGIVWVLLGLFLLVSTAGILGFRL*
Ga0134127_1246918413300010399Terrestrial SoilVITLPPLFFYAMGTMLIVFDATRAIVLRRRHPDRELTEDTPDRAKARRRHRIMGVVFVVMGAFL
Ga0134122_1082767023300010400Terrestrial SoilMPQISLPPLFFYAIGTLLVVFGALRAVVLGRRRGDRELTEDTPERAKARKRHLAMGIIWVLMGAFLIVSTAGILGRR*
Ga0134122_1083840423300010400Terrestrial SoilVTLPPLFFYAMGTMLIVFGAARAIVLGRRHPDREMTEDTPDRAKARRLHRIMGVIFVLMGAFLIASTAGILGGKR*
Ga0134121_1028029823300010401Terrestrial SoilMNIVIPPILFYAVGTLLVVFGALRTIILGRRRPSRELTDDTPERAKERRRHFMWGIIWVLLGLFL
Ga0134121_1048633323300010401Terrestrial SoilMNIVIPPIIFYAVGTMLVVFGALRTIILGRRRASRELTDDTPERAKERRRHFMWGIIWVLLGLFLILSTSGVLRSRAGV*
Ga0134123_1257810923300010403Terrestrial SoilVTLPPIFFYAIGTLLVVFGALRSIMMGRRRADRELTEDTPERAKARRRHMTMGIIWVVMGVFLIASTAGILGRH*
Ga0137325_113292013300011415SoilVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDREMTEDTPDRAKARRRHLIMGIVFVVMGAFLIA
Ga0137436_111309123300011423SoilMNLPPIFFYAIGTLFVVFGGLRVAILGRRRGDREVAEETPERAKARRQHRIWGTIQIVAGAILIASTAGVLGRR*
Ga0137443_117080823300011433SoilAVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDREMTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR*
Ga0137432_108746723300011439SoilVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDRELTEDTPDRAKARRRHRIMGVIFVVMGAFLIVSTVGILGGK
Ga0137457_133151623300011443SoilVITLPPLFFYAMGTMLIVFGTARAIVLGRRRPDREMTEDTPDRAKARRRHLIMGIVFVVMGAFLIASTAGILGGKR*
Ga0137319_106421623300012167SoilVITLPPLFFYAIGTMLIVFGTARAIVLGRRRPDREMTEDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKR*
Ga0150985_12079057123300012212Avena Fatua RhizosphereVITLPPVFFYAIGTLLVVFGAMRVVVLGRRRVDRELTADTPERAKVRRRHRIWGLIWVAMGAFLIASTAGILGLRH*
Ga0137367_1007914923300012353Vadose Zone SoilVITLPPVFFYAIGTLLVVFGAMRAAVLGRRRGDRELTDDTPERAKVRRRHRIWGFIWVAMGAFLIASTAGILGLGH*
Ga0157305_1027454013300012891SoilLPPIFFYAIGTLLVVFGALRAVVLGRRRADREIIDDTPERAKTRRRHLVMGVIWVMMGVFLIASTAGILGRH*
Ga0157293_1031496823300012898SoilVITLPPLFFYAMGTMLIVFGTARVIVLGRRRPDREMTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR*
Ga0157288_1011996523300012901SoilSGIAEIGRADEDGAVITLPPIFFYAIGRLLGVFGGRRVGFLGRRRADRELTGDTPERAKVRRRHTIWGIIWMAMGLFLIGSTAGVLGLRH*
Ga0157295_1041141623300012906SoilVVQLPPLFFYAIGTLLVVFGALRTVVLGRRRPERELTEDTPERAKARRRHKIMGIVWLLMGLFL
Ga0157308_1006337723300012910SoilVSLPPIFFYAIGTLLVVFGALRAVVLGRRRADREIIDDTPERAKTRRRHLVMGVIWVMMGVFLIASTAGILGRH*
Ga0157298_1012681723300012913SoilVITLPPIFFYAIGTLLVVFGGLRIAFLGRRRADRELTADTPERAKARRRHTIWGIIWMAMGLFLIGST
Ga0164300_1093127813300012951SoilVITLPPIFFYAIGTLLVVFGGLRVAFLGRRRPDRELTADTPDRAKARRRHRIMGVIFIVMGAFLIASTAGILGGKR*
Ga0164308_1026634433300012985SoilVITLPPIFFYAIGTLLVVFGGLRVAFLGRRRPDRELTADTPDRAKARRRHTIWGIIWMAMGALLIASTAGVLGLR
Ga0164307_1016624023300012987SoilPIFFYAIGTLLVVFGGLRVAFLGRRRPDRELTADTPDRAKARRRHTIWGIIWMAMGAFLIASTAGVLGLRH*
Ga0164306_1036782613300012988SoilVITLPPIFFYAIGTLLVVFGGLRVAFLGRRRPDRELTADTPDRAKARRRHTIWGIIWMAMGAFLIASTAGVGA
Ga0157374_1154828113300013296Miscanthus RhizosphereVITLPPIFFYAIGTLLVVFGGLRVVLLGRRRADRELTGDTPERAKVRRRHTIWGIIWVAMGAFLIASTAGILGLRK*
Ga0075351_111952023300014318Natural And Restored WetlandsVVQLPPLFFYAIGTLLVVFGALRTVVLDRRRPDRELTEDTPERAKARRRHLIMGIVWLLMGLFLIVSTTGITGRR*
Ga0163163_1099544413300014325Switchgrass RhizosphereQLPPLFFYAIGTLLVVFGALRTVVLGRRRPERELTEDTPERAKARRRHKIMGIVWLLMGLFLIVSTTGITGRR*
Ga0157379_1197681713300014968Switchgrass RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMSTGIVWLRLGFFRTFSTA
Ga0157376_1014458423300014969Miscanthus RhizosphereVITLPPIFFYAIGTLLVVFGALRAVVLGRRRADRELTEDTPERAKARKRHKAMGIVWVLMGAFLIASTAGILGRH*
Ga0132258_1254181233300015371Arabidopsis RhizosphereVITLPPVFFYAIGTLLVVFGGLRAVVLGRRRADRELSEDTPERAKARKRHLLMGVIWVGMGAMLILTGAGILGPHH*
Ga0132258_1343265923300015371Arabidopsis RhizosphereMSLPPIFFYAIGTLLVVFGALRAVVLGRRRADREITDDTPERAKTRRRHLVMGVIWVLMGGFLIASTAGILGRH*
Ga0132256_10018160933300015372Arabidopsis RhizosphereVITLPPVFFYAIGTLLVVFGGLRAVVLGRRSADRELSEDTPERAKARKRHLLMGVIWVGMGVMLILTGAGILGPHH*
Ga0132255_10011456123300015374Arabidopsis RhizosphereVITLPPVFFYAIGTLLVVFGALRFAVLGRRRADREMTEDTPERAKARKRHLLMGVIWVGMGVMLILTGAGILGPHH*
Ga0132255_10318320013300015374Arabidopsis RhizosphereVITLPPVFFYAIGTLLVVFGALRAIVLGRRRADRELTEETPERAKARKRHLAMGIVWLLMGLFLIFSTAGILSRR*
Ga0184624_1028129113300018073Groundwater SedimentVITLPPVFFYAIGTLLVVFGALRVAILGRRRAGRELTDDTPDRAKVRRRHRIWGIIWVAMGAFLIASTAGILGLRH
Ga0184625_1053397713300018081Groundwater SedimentVITLPPLFFYAMGTMLIVFGAARAIVLGRRHPDREMTEDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKR
Ga0184628_1000240953300018083Groundwater SedimentVTLPPLFFYAMGTMLIVFGAARAIVLGRRHPDREMTEDTPDRAKVRRRHRIMGVIFVVMGAFLIASTAGILGGKR
Ga0184628_1002576523300018083Groundwater SedimentMNLPPIFFYAIGTLFVVFGGLRVAILGRRRGDREVAEETPERAKARRQHRIWGTIQIVAGAILIASTAGVLGRR
Ga0190271_1001298323300018481SoilMGTMLIVFGTARAIVLGRRRADREMTEDTPDRAKARRRHLIMGVVFVVMGAFLIASTAGILGGKR
Ga0066669_1114514123300018482Grasslands SoilVITLPPIFFYAIGTLLVVFGALRTFVLGRRRADRELVEETPERAKVRKRHLAMGIDWVLMGLFLIISTAGILGLGHH
Ga0066669_1223254823300018482Grasslands SoilVITLPPVFFYAIGTLLVVFGALRAAILGRRRADRELTEDTPERAKVRRRHKIWGAIWVAMGAFLIASTAGILGLRH
Ga0173482_1077865323300019361SoilVITLPPIFFYAIGTLLVVFGGLRIAFLGRRRADRELTDDTPERAKARRRHTIWGIIWMAMGLFLIGSTAGVLGLRH
Ga0173482_1079881713300019361SoilVVQLPPLFFYAIGTLLVVFGALRTVVLGRRRPERELTEDTPERAKARRRHKIMGIVWLLMGLFLIVSTTGITGRR
Ga0173479_1018728213300019362SoilVITLPPIFFYAIGTLLVVFGGLRIAFLGRRRADRELTADTPDRAKARRRHTIWGIIWMAMGLFLIGSTAGVLGLRH
Ga0193692_108940323300020000SoilVITLPPVFFYAIGTLLVVFGGLRVAILGRRRAGRELTEDTPERAKVRRRHRIWGVIWVAMGAFLIASTAGILGLRH
Ga0210380_1007139423300021082Groundwater SedimentMNLPPIFFYAIGTLFVVFGGLRVAILGRRRGDREVAEETPERAKARRQHRIWGTIQIVAGAILIASTAGVL
Ga0222622_1001439133300022756Groundwater SedimentVSLPPVFFYAIGTLLLVFGALRAVVLGRRRADREITDDTPERAKTRRRHLVMGVIWVAMGVFLIASTAGILGRR
Ga0222622_1024930823300022756Groundwater SedimentVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDRELTDDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKR
Ga0222622_1077595823300022756Groundwater SedimentVITLPPVFFYAIGTLLVVFGGFRVAILGRRRAGRELTEDTPERAKVRRRHRIWGVIWVPMGAFLIASTAGILGLRH
Ga0247746_109580823300022886SoilVITLPPIFFYAIGTLLVVFGGLRIAFLGRRRADRELTDDTPDRAKARRRHTIWGIIWMAMGLFL
Ga0247688_101591823300024186SoilMPQVTVPPILFYAVGTLLVVFGALRTIMLGRRRPERELTEDTPERAKARRRHMAMGIVWVLMGLFLIISTTGLTQRGR
Ga0247673_106645613300024224SoilLFYAVGTLLVVFGALRTIMLGRRRPERELTEDTPERAKARRRHMAMGIVWVLMGLFLIISTTGLTQRGR
Ga0247660_100312733300024317SoilPILFYAVGTLLVVFGALRTIMLGRRRPERELTEDTPERAKARRRHMAMGIVWVLMGLFLIISTTGLTQRGR
Ga0207697_1002867823300025315Corn, Switchgrass And Miscanthus RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITSRR
Ga0207688_1026693423300025901Corn, Switchgrass And Miscanthus RhizosphereVITLPPIFFYAIGSLLVVFGGLRVVFLGRRRADRELTDDTPERAKVRRRHTIWGIIWVAMGAFLIASTAGILGLRK
Ga0207680_1047802813300025903Switchgrass RhizosphereVITLPPVFFYAIGTLLVVFGALRFAVLGRRRADRELGEDTPERAKARKRHLLMGAIWVGMGVMLILTGAGILGPHR
Ga0207707_1155775723300025912Corn RhizosphereVITLPPIFFYAIGTLLVVFGALRTVVLGRRRPDRELTEDTPERAKARKRHKAMGIIWLLMGAFLIASTAGILGRR
Ga0207649_1134226623300025920Corn RhizosphereVITLPPIFFYAIGTLLVVFGGLRVVFLGRRRADRELTGDTPERAKVRRRHTIWGIIWVAMGAFLIASTAGILGLRK
Ga0207650_1001632223300025925Switchgrass RhizosphereMNLPPIFFYAVGTAFVVFGGLRVAILGRRRAGRELTEDTPERAQTRRRHLIWGSIQVIAGLVLIASTAGVLGRR
Ga0207701_1011516123300025930Corn, Switchgrass And Miscanthus RhizosphereVTLPPIFFYVIGTLLVVFGVMRTVVLGRRRADREITDDTPERAKARRRHKLMGLIWVVMGAFLIASTAGILGRH
Ga0207704_1157792323300025938Miscanthus RhizospherePIFFYVIGTLLVVFGVMRTVVLGRRRADREITDDTPERAKARRRHKLMGLIWVVMGAFLIASTAGILGRH
Ga0207661_1067987623300025944Corn RhizosphereVITLPPIFFYAIGTLLVVFGVLRTVVLGRRRPDRELTEETPERAKARKRHKAMGIVWLLMGAFLIASTAGILGRH
Ga0207651_1012044623300025960Switchgrass RhizosphereVITLPPLFFYAMGTMLIVFGAARAIVLGRRRADREMTEDTPDRAKARRRHRIMGVIFVVMGAFLIASTAGILGGKR
Ga0207640_1011455713300025981Corn RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWVLMGLFLIVSTTGITGRR
Ga0207639_1066485423300026041Corn RhizosphereMNPSLPPIFFYAIGTLLSVFGVARALTLGRRHADRELSEDTPERAKARRRHLVWGLLWAVTGVFLVVSTALHR
Ga0207641_1133531113300026088Switchgrass RhizosphereFFYVIGTLLVVFGVMRTVVLGRRRADREITDDTPERAKARRRHKLMGLIWVVMGAFLIASTAGILGRH
Ga0207648_1084823323300026089Miscanthus RhizosphereTMLIVFGAARAIVLGRRRPDREMTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR
Ga0207676_1086034123300026095Switchgrass RhizosphereVITLPPVFFYAIGTLLVVFGALRAVVLGRRRGDRELTEDTPERAKARKRHLAMGIVWVLMGAFLIVSTAGILGRR
Ga0207675_10008145923300026118Switchgrass RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITGRR
Ga0209971_117024113300027682Arabidopsis Thaliana RhizospherePLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITSRR
Ga0209998_1018705813300027717Arabidopsis Thaliana RhizosphereVQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIVSTTGITSRR
Ga0209465_1000230913300027874Tropical Forest SoilVISLPPIFFYAIGTLLVVFGVMRTVVLGRRRADRELVDETPERAKARKRHFAMGIVWVLLGLFLLVSTAGILGFRL
Ga0207428_1000345163300027907Populus RhizosphereVITLPPLFFYAMGTMLIVFGTARVIVLGRRRPDRELTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR
Ga0247684_102322913300028138SoilMPQVTVPPILFYAVGTLLVVFGALRTIMLGRRRPERELTEDTPERAKARRRHMAMGIVWVLMGLFLIISTTGLTQRG
Ga0268265_1067252723300028380Switchgrass RhizosphereVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWVLMGLFLIVSTTGITSRR
Ga0307280_1016371023300028768SoilVITLPPVFFYAIGTLLVVFGALRAVILGRRRGDRELTADTPERAKVRRRHKIWGVIWVAMGAFLIASTAGILGVRH
Ga0307503_1043655713300028802SoilMNLPPIFFYAIGTLFVVFGGLRVAILGRRRGDREVTEETPERAKARRQHRIWGTVQIVAGAILIASTAGVLGRR
Ga0307296_1016221023300028819SoilVITLPPVFFYAIGTLLVVFGGLRVAILGRRRAGRELTEDTPDRAKVRRRHRIWGVIWVAMGAFLIASTAGILGLRH
Ga0307506_1022653023300031366SoilVITLPPVFFYAIGTLLVVFGGLRVAILGRRRAGRELTEDTPDRAKVRRRHRIWGIIWVAMGAFLIASTAGILGLRH
Ga0310887_1095693523300031547SoilVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDREMTDDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR
Ga0310813_1136708523300031716SoilVNLPPIFFYAIGTLFVVFGGLRAIFLGRRRGDRDLADETPERAKMRRRHLVWGCIQVAAGAILIASTAGVL
Ga0310813_1144665923300031716SoilVITLPPIFFYAIGTLLVVFGGLRIAFLGRRRADRELTADTPDRAKARRRHTIWGIIWMAMGAFLIASTAGVLGLRH
Ga0307469_1249859423300031720Hardwood Forest SoilVITLPPVFFYAIGTLLVVFGALRAVVLGRRRADRELSEDTPERAKARKRHLLMGVIWVGMGAMLILTGAGILGPHH
Ga0318551_1066207823300031896SoilFYAVGTLLVVFGVLRAVVLGRRRGGAAGDDSGEITEDTPARARTRKRHVAFGIVWVVMGLFLIVSTAGVLRMHRGF
Ga0310897_1001634513300032003SoilVIQLPPLFFYAVGTLLVVFGALRTVVLGRRRPDREVVEDTPERAKARRRHMIMGIVWLLMGLFLIV
Ga0310906_1092817523300032013SoilVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDREMTEDTPDRAKARRRHRIMGVVFVVMGAFLIASTAGILGGKR
Ga0310906_1136937823300032013SoilMSLPPIFFYAIGTLLVVFGVLRAFVLGRRRAEREITDDTPERAKTRRRHLVMGVIWVVMGGF
Ga0318533_1137858823300032059SoilVINLPPIFFYAIGTLFVVFGGLRAIFLGRRRGDRDLADETPERAKMRRRHLVWGCIQVLAGAILIASTAGVLGMGR
Ga0310889_1077221923300032179SoilVITLPPLFFYAMGTMLIVFGAARAIVLGRRRPDREMTDDTPDRAKARRRHRIMGVVFVVMGAFLIA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.