Metagenome / Metatranscriptome Family F048836

Basic Information
Family ID	F048836
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	45 residues
Representative Sequence	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRPPREFD
Number of Associated Samples	122
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.24 %
% of genes near scaffold ends (potentially truncated)	95.92 %
% of genes from short scaffolds (< 2000 bps)	90.48 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (64.626 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.490 % of family members)
Environment Ontology (ENVO)	Unclassified (22.449 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.259 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.58% β-sheet: 8.45% Coil/Unstructured: 61.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF01047	MarR	11.56
PF02771	Acyl-CoA_dh_N	5.44
PF00583	Acetyltransf_1	3.40
PF13460	NAD_binding_10	3.40
PF00571	CBS	2.72
PF02452	PemK_toxin	2.72
PF13271	DUF4062	2.72
PF13520	AA_permease_2	2.72
PF07883	Cupin_2	2.04
PF02913	FAD-oxidase_C	2.04
PF01828	Peptidase_A4	1.36
PF08327	AHSA1	1.36
PF00903	Glyoxalase	1.36
PF04149	DUF397	1.36
PF01545	Cation_efflux	0.68
PF04185	Phosphoesterase	0.68
PF01923	Cob_adeno_trans	0.68
PF00768	Peptidase_S11	0.68
PF07161	LppX_LprAFG	0.68
PF00406	ADK	0.68
PF13391	HNH_2	0.68
PF05988	DUF899	0.68
PF00005	ABC_tran	0.68
PF03235	DUF262	0.68
PF06032	DUF917	0.68
PF01494	FAD_binding_3	0.68
PF13476	AAA_23	0.68
PF00535	Glycos_transf_2	0.68
PF03572	Peptidase_S41	0.68
PF01243	Putative_PNPOx	0.68
PF00909	Ammonium_transp	0.68
PF04542	Sigma70_r2	0.68
PF12256	TcdB_toxin_midN	0.68
PF10722	YbjN	0.68
PF13338	AbiEi_4	0.68
PF11066	DUF2867	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	5.44
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	2.72
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.04
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.36
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.68
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.68
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.68
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.68
COG3535	Uncharacterized conserved protein, DUF917 family	Function unknown [S]	0.68
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.68
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.68
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.68
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.68
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.68
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.68
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.68
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.68
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.63 %
Unclassified	root	N/A	35.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.63 %
Unclassified	root	N/A	35.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.63 %
Unclassified	root	N/A	35.37 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.98 %
Unclassified	root	N/A	35.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.26 %
Unclassified	root	N/A	35.37 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.04 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.37 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.97 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.37 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	2.72 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.72 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	2.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.04 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.04 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.04 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.36 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.36 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.68 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.68 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.37 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	2.72 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	2.04 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.36 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.36 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.36 %
unclassified Nitriliruptorales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales	0.68 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.68 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.68 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.68 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.37 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	2.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.04 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	2.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.36 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.68 %
Thermocatellispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermocatellispora	0.68 %
Sphaerimonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerimonospora	0.68 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.68 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.68 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.68 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.37 %
unclassified Catenulispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora	2.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.36 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.68 %
Mycobacterium innocens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium innocens	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
unclassified Actinoplanes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes	0.68 %
Sporichthya polymorpha	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	0.68 %
Kribbella capetownensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella capetownensis	0.68 %
Sphaerimonospora thailandensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerimonospora → Sphaerimonospora thailandensis	0.68 %
Thermocatellispora tengchongensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermocatellispora → Thermocatellispora tengchongensis	0.68 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.68 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.37 %
Catenulispora sp. 13_1_20CM_3_70_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	2.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.36 %
Actinoplanes sp. TFC3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. TFC3	0.68 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.68 %
Mycobacterium innocens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium innocens	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Sporichthya polymorpha	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	0.68 %
Kribbella capetownensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella capetownensis	0.68 %
Sphaerimonospora thailandensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerimonospora → Sphaerimonospora thailandensis	0.68 %
Thermocatellispora tengchongensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermocatellispora → Thermocatellispora tengchongensis	0.68 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.68 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10670476	Not Available	599	Open in IMG/M
3300002245\|JGIcombinedJ26739_100968379	Not Available	734	Open in IMG/M
3300005341\|Ga0070691_10761088	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005435\|Ga0070714_101386576	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005454\|Ga0066687_10719467	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005539\|Ga0068853_100370205	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300005617\|Ga0068859_101254076	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005843\|Ga0068860_100528094	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005892\|Ga0075275_1047863	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300006804\|Ga0079221_10246688	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300006871\|Ga0075434_102294310	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009038\|Ga0099829_11133955	Not Available	648	Open in IMG/M
3300009089\|Ga0099828_11972185	Not Available	511	Open in IMG/M
3300009090\|Ga0099827_11614866	Not Available	565	Open in IMG/M
3300009521\|Ga0116222_1562479	Not Available	500	Open in IMG/M
3300009636\|Ga0116112_1102624	Not Available	806	Open in IMG/M
3300009672\|Ga0116215_1229143	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300009698\|Ga0116216_10091677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerimonospora → Sphaerimonospora thailandensis	1870	Open in IMG/M
3300009698\|Ga0116216_10312994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300009824\|Ga0116219_10367469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300009839\|Ga0116223_10499801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300009839\|Ga0116223_10503303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300010043\|Ga0126380_11354293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300010046\|Ga0126384_10687508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	905	Open in IMG/M
3300010048\|Ga0126373_10074987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3066	Open in IMG/M
3300010048\|Ga0126373_10888238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	955	Open in IMG/M
3300010048\|Ga0126373_11802540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300010361\|Ga0126378_11210843	Not Available	853	Open in IMG/M
3300010373\|Ga0134128_11534222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	733	Open in IMG/M
3300010376\|Ga0126381_100336362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2082	Open in IMG/M
3300010376\|Ga0126381_104749498	Not Available	523	Open in IMG/M
3300010379\|Ga0136449_101085370	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1276	Open in IMG/M
3300010379\|Ga0136449_102183787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300010379\|Ga0136449_103484652	Not Available	600	Open in IMG/M
3300010876\|Ga0126361_11000744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	626	Open in IMG/M
3300010876\|Ga0126361_11239233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2329	Open in IMG/M
3300011119\|Ga0105246_11363790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300011269\|Ga0137392_10136170	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300011271\|Ga0137393_11268675	Not Available	625	Open in IMG/M
3300012189\|Ga0137388_10735682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	916	Open in IMG/M
3300012189\|Ga0137388_11083732	Not Available	737	Open in IMG/M
3300012209\|Ga0137379_10757222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300012209\|Ga0137379_11024067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300012211\|Ga0137377_10811240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	868	Open in IMG/M
3300012351\|Ga0137386_10117729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1889	Open in IMG/M
3300012357\|Ga0137384_10739299	Not Available	798	Open in IMG/M
3300012357\|Ga0137384_11098712	Not Available	637	Open in IMG/M
3300012359\|Ga0137385_11176381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	628	Open in IMG/M
3300012944\|Ga0137410_10387482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300015357\|Ga0134072_10019443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1676	Open in IMG/M
3300016319\|Ga0182033_10858543	Not Available	802	Open in IMG/M
3300016341\|Ga0182035_11492977	Not Available	608	Open in IMG/M
3300016371\|Ga0182034_10132853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya → Sporichthya polymorpha	1843	Open in IMG/M
3300016422\|Ga0182039_10262206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1414	Open in IMG/M
3300017792\|Ga0163161_11473217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300017932\|Ga0187814_10278844	Not Available	637	Open in IMG/M
3300017940\|Ga0187853_10330616	Not Available	684	Open in IMG/M
3300017943\|Ga0187819_10136287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1463	Open in IMG/M
3300017970\|Ga0187783_10876045	Not Available	647	Open in IMG/M
3300017972\|Ga0187781_11237985	Not Available	550	Open in IMG/M
3300017995\|Ga0187816_10045631	Not Available	1819	Open in IMG/M
3300020070\|Ga0206356_11904339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300020582\|Ga0210395_11205836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	556	Open in IMG/M
3300020583\|Ga0210401_11172387	Not Available	627	Open in IMG/M
3300021171\|Ga0210405_10714610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	773	Open in IMG/M
3300021178\|Ga0210408_10755287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300021178\|Ga0210408_10976360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	656	Open in IMG/M
3300021402\|Ga0210385_10423489	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300021404\|Ga0210389_10998519	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300021478\|Ga0210402_11294735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	656	Open in IMG/M
3300021479\|Ga0210410_11409640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300021560\|Ga0126371_10450905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1432	Open in IMG/M
3300021560\|Ga0126371_13357689	Not Available	541	Open in IMG/M
3300024254\|Ga0247661_1017204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246	Open in IMG/M
3300025898\|Ga0207692_11214936	Not Available	501	Open in IMG/M
3300025907\|Ga0207645_10441199	Not Available	878	Open in IMG/M
3300025920\|Ga0207649_10017381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4076	Open in IMG/M
3300025929\|Ga0207664_11203114	Not Available	676	Open in IMG/M
3300025961\|Ga0207712_10592967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	958	Open in IMG/M
3300025972\|Ga0207668_10446261	Not Available	1103	Open in IMG/M
3300027096\|Ga0208099_1000733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3699	Open in IMG/M
3300027648\|Ga0209420_1058956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → unclassified Catenulispora → Catenulispora sp. 13_1_20CM_3_70_7	1138	Open in IMG/M
3300027703\|Ga0207862_1059099	Not Available	1155	Open in IMG/M
3300027725\|Ga0209178_1188415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300027795\|Ga0209139_10064421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300027817\|Ga0209112_10101750	Not Available	929	Open in IMG/M
3300027853\|Ga0209274_10380666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300027854\|Ga0209517_10023058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5628	Open in IMG/M
3300027905\|Ga0209415_10103862	All Organisms → cellular organisms → Bacteria	3100	Open in IMG/M
3300028781\|Ga0302223_10031707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1871	Open in IMG/M
3300028784\|Ga0307282_10551940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300028867\|Ga0302146_10145061	Not Available	958	Open in IMG/M
3300028867\|Ga0302146_10429476	Not Available	503	Open in IMG/M
3300029951\|Ga0311371_11458032	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300030058\|Ga0302179_10331431	Not Available	670	Open in IMG/M
3300030399\|Ga0311353_11159832	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300030490\|Ga0302184_10003893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9271	Open in IMG/M
3300030490\|Ga0302184_10160597	Not Available	968	Open in IMG/M
3300030618\|Ga0311354_10429027	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300030706\|Ga0310039_10354964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300030707\|Ga0310038_10067915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium innocens	1948	Open in IMG/M
3300030739\|Ga0302311_10557028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	778	Open in IMG/M
3300031231\|Ga0170824_123523472	Not Available	576	Open in IMG/M
3300031234\|Ga0302325_10490032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1863	Open in IMG/M
3300031234\|Ga0302325_10903192	Not Available	1225	Open in IMG/M
3300031234\|Ga0302325_11113932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1062	Open in IMG/M
3300031525\|Ga0302326_12546127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300031544\|Ga0318534_10642467	Not Available	601	Open in IMG/M
3300031561\|Ga0318528_10661561	Not Available	559	Open in IMG/M
3300031682\|Ga0318560_10111875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1421	Open in IMG/M
3300031708\|Ga0310686_110971989	Not Available	893	Open in IMG/M
3300031708\|Ga0310686_112408344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	692	Open in IMG/M
3300031708\|Ga0310686_112862259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2988	Open in IMG/M
3300031713\|Ga0318496_10016860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3557	Open in IMG/M
3300031713\|Ga0318496_10256392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	964	Open in IMG/M
3300031736\|Ga0318501_10425445	Not Available	719	Open in IMG/M
3300031747\|Ga0318502_10081967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1759	Open in IMG/M
3300031748\|Ga0318492_10010745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3739	Open in IMG/M
3300031751\|Ga0318494_10731155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300031768\|Ga0318509_10773969	Not Available	531	Open in IMG/M
3300031770\|Ga0318521_10100379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1592	Open in IMG/M
3300031770\|Ga0318521_10181550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	1208	Open in IMG/M
3300031788\|Ga0302319_10706592	Not Available	1021	Open in IMG/M
3300031792\|Ga0318529_10304712	Not Available	742	Open in IMG/M
3300031793\|Ga0318548_10441118	Not Available	638	Open in IMG/M
3300031795\|Ga0318557_10597301	Not Available	506	Open in IMG/M
3300031821\|Ga0318567_10209014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1091	Open in IMG/M
3300031835\|Ga0318517_10353304	Not Available	664	Open in IMG/M
3300031846\|Ga0318512_10020336	All Organisms → cellular organisms → Bacteria	2728	Open in IMG/M
3300031941\|Ga0310912_10458087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	994	Open in IMG/M
3300031954\|Ga0306926_10408884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1674	Open in IMG/M
3300031954\|Ga0306926_12943418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300031959\|Ga0318530_10170986	Not Available	887	Open in IMG/M
3300032001\|Ga0306922_11239904	Not Available	757	Open in IMG/M
3300032039\|Ga0318559_10058051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1638	Open in IMG/M
3300032041\|Ga0318549_10563872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella capetownensis	511	Open in IMG/M
3300032055\|Ga0318575_10301863	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300032060\|Ga0318505_10230193	Not Available	871	Open in IMG/M
3300032091\|Ga0318577_10062596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1690	Open in IMG/M
3300032091\|Ga0318577_10269382	Not Available	815	Open in IMG/M
3300032160\|Ga0311301_10204519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3374	Open in IMG/M
3300032180\|Ga0307471_102442017	Not Available	661	Open in IMG/M
3300032895\|Ga0335074_11394435	Not Available	568	Open in IMG/M
3300032896\|Ga0335075_10272352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1924	Open in IMG/M
3300032896\|Ga0335075_10402232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. TFC3	1455	Open in IMG/M
3300032896\|Ga0335075_11739497	Not Available	504	Open in IMG/M
3300032898\|Ga0335072_10014044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Thermocatellispora → Thermocatellispora tengchongensis	11380	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.20%
Host-Associated	Host-Associated	6.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.12%
Plants	Host-Associated → Plants	6.80%
Aquatic	Environmental → Aquatic	4.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.91%
Peat	Environmental → Terrestrial → Peat	10.20%
Freshwater	Environmental → Aquatic → Freshwater	4.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.20%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.04%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.20%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.04%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.36%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048836

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_106704761	3300001593	Forest Soil	MKIIEGGLRVAASDVANFLACQQLTQLDLGAARGALRPPH
JGIcombinedJ26739_1009683791	3300002245	Forest Soil	MRIVEGRVRVAASDVANFLACQELTQLDLRAARGVLRPP
Ga0070691_107610882	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPREFDIGFRDLVRR
Ga0070714_1013865762	3300005435	Agricultural Soil	VKIISGRLRLSASDVANFLACQHLTRLDLLQAHGELRPPHASDISFAALVER
Ga0066687_107194671	3300005454	Soil	MKITEGRVRLAASDVANFLACRRLTQLDLARARGELRPPREFDVGFQDLVRRGEV
Ga0068853_1003702053	3300005539	Corn Rhizosphere	MKISEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPREFDIGFR
Ga0068859_1012540762	3300005617	Switchgrass Rhizosphere	MKISEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPRE
Ga0068860_1005280941	3300005843	Switchgrass Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPREFDIGF
Ga0075275_10478631	3300005892	Rice Paddy Soil	VKITGDRLRLSASDVANFLACQHLTRLDVLRAHGRLQPPQVYDLGFEDLVKRGE
Ga0079221_102466881	3300006804	Agricultural Soil	MKVTDGRVRVAASDVANFLACRRLTQLDLARARGELRPPREFDIGF
Ga0075434_1022943101	3300006871	Populus Rhizosphere	MKVTDGRVRVAASDVANFLACRRLTQLDLARARGELRPPHARDLGF
Ga0099829_111339551	3300009038	Vadose Zone Soil	MKITDSRVRLSASDVANYLACQHLSRVYLQRALGTLRPPHEFEIRFQDLVQRGEAHE
Ga0099828_119721851	3300009089	Vadose Zone Soil	MKITGAHLRLAASDVANFLACRRLTQLDLLRARGELRPPREF
Ga0099827_116148662	3300009090	Vadose Zone Soil	MKITGAHLRLAASDVANFLACRRLTQLDLLRARGELRPP
Ga0116222_15624792	3300009521	Peatlands Soil	MRGQKMKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRPPREFD
Ga0116112_11026241	3300009636	Peatland	VKFAGERLRLSASDVANFVACQHMTRLDLLEARGTLHRPRRFDVG
Ga0116215_12291431	3300009672	Peatlands Soil	VRLAASDVANFLACRRLTQLDLLRARGELRPPREFDIGFQDL
Ga0116216_100916772	3300009698	Peatlands Soil	MMIIEGRVRLAASDVANFLACRRLTQLDLLRARGELRP*
Ga0116216_103129942	3300009698	Peatlands Soil	MKIIAGRVRVAASDVANFLDCRRLTQLDLLRAQRELEPP
Ga0116219_103674692	3300009824	Peatlands Soil	MKIIEGRVRVSASDVANFLACQELTQLDLRAAQRTLRPSRDSLE
Ga0116223_104998011	3300009839	Peatlands Soil	MKIIEGRVRVSASDVANFLACQELTQLDLRAAQRTLRPSRDSLERSRAQAR
Ga0116223_105033031	3300009839	Peatlands Soil	MKITEGRVRVAASDVANFLACRRLMQLDLLRARGS
Ga0126380_113542931	3300010043	Tropical Forest Soil	VRLERNGRLRLSASDVANFLACGHLTRLDLLHARGELDPPYAFDSGF
Ga0126384_106875081	3300010046	Tropical Forest Soil	MRITEGRLRVSASDVANFLACRQLTQLDLQAAQRTLRPPYA
Ga0126373_100749871	3300010048	Tropical Forest Soil	VRVIDGRVRLAASDVANFLACRHLTRLDLLRARGVIEPPHQYDAGF
Ga0126373_108882383	3300010048	Tropical Forest Soil	VRIIDGRVRLAASDVANFLACRHLTRLDLLRARGVIEPPHQYDAGFEDLVKRGW
Ga0126373_118025402	3300010048	Tropical Forest Soil	VRIIDQRVRLAASDVANFLACRHLTRLDLLRARGVIEPPHQYDAGF
Ga0126378_112108433	3300010361	Tropical Forest Soil	VRIIDGQVRLSASDVANFLACRHLTRLELLHARDLINPPYFNDAGFDDIVK
Ga0134128_115342222	3300010373	Terrestrial Soil	MKVTDGRVRVAASDVANFLACRRLTQLDLARARGELRPPREFDIGF*
Ga0126381_1003363624	3300010376	Tropical Forest Soil	VRVIDGRVRLAASDVANFLACRHLTRLDLLRARGVI
Ga0126381_1047494981	3300010376	Tropical Forest Soil	MRVIDGQVRLSASDVANFLACRHLTRLELLHARRVIDPPYFSDAGFD
Ga0136449_1010853701	3300010379	Peatlands Soil	MKFAGDRLRLSASDVANFVACQHMTRLDLLEARGALHRPREFDL
Ga0136449_1021837871	3300010379	Peatlands Soil	VRLAASDVANFLACQRLTQLDLLRARGELRPPREFDVGFQELVRREHDIRDVS*
Ga0136449_1034846521	3300010379	Peatlands Soil	VRLDKGQLRLAASDVANFVACGHLTRLDLLHAWGEIQPPRAFDVGFQDLVARGEAHEAAVLQR
Ga0126361_110007442	3300010876	Boreal Forest Soil	MKVIGGRVRLAASDVANFLACRRLTQLDLLRARGELRAPREFDVGFEELVRRG
Ga0126361_112392333	3300010876	Boreal Forest Soil	MKITEGRARLAASDDANFLACRRLTQLDLLMARKELEPSREA*
Ga0105246_113637902	3300011119	Miscanthus Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRPPREFDIGF
Ga0137392_101361701	3300011269	Vadose Zone Soil	MKITDSRVRLSASDVANYLACQRLTRLDLQRALGTLRPPHEFDIGFQD
Ga0137393_112686753	3300011271	Vadose Zone Soil	MQMKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRP
Ga0137388_107356821	3300012189	Vadose Zone Soil	MKITDSRVRLSASDVANYLACQHLSRLDLQRALGTLRPPHEFDIGFQDLVQ
Ga0137388_110837321	3300012189	Vadose Zone Soil	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRPPREFD
Ga0137379_107572221	3300012209	Vadose Zone Soil	MKITEGRVRVSASDVANFLACQQLTQLDLQAARRT
Ga0137379_110240672	3300012209	Vadose Zone Soil	MKIIEGRVRLAASDVANFLACRRLTQLDLLRARGELRPPREF
Ga0137377_108112401	3300012211	Vadose Zone Soil	VKITEGRLRLSASDVANYLACQHLTRLDLRRAQGTLRPPRE
Ga0137386_101177294	3300012351	Vadose Zone Soil	MKIAEGRLRVSASDVANFLACRRLTQLDLLRARGELRPPHA
Ga0137384_107392992	3300012357	Vadose Zone Soil	MKITEGRLRLAASDVANFLACRRLTQLDLLRARGELRPPREFD
Ga0137384_110987121	3300012357	Vadose Zone Soil	MKITEGRLRLSASDVANYLACQHLTRLDLQMAQGTLRPPREFDIGFQD
Ga0137385_111763811	3300012359	Vadose Zone Soil	VKITEGRLRLSASDVANYLACQHLTRLDLRRAQGTLRPPREFDIGFQDL
Ga0137410_103874821	3300012944	Vadose Zone Soil	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGKLR
Ga0134072_100194431	3300015357	Grasslands Soil	MKISEGRVRLAASDVANFLACRRLTQLDLLRARGELR
Ga0182033_108585431	3300016319	Soil	VKITDSQVRLSASDVANFLACQHLTRLDLLRARGELAPPRRFDVGFQDLIK
Ga0182035_114929772	3300016341	Soil	VKITGGRLRLSASDVANFLACQHLTRLDLLQAREQLHPPHEFD
Ga0182034_101328533	3300016371	Soil	VKITGGRLRLSASDVANFLACQHLTRLDLLRARGQLHPP
Ga0182039_102622062	3300016422	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLRARGE
Ga0163161_114732171	3300017792	Switchgrass Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPREFDIGFRDLV
Ga0187814_102788441	3300017932	Freshwater Sediment	VRIIDGRVRLAASDVANFLACRHLTRLDLLHARGLISPPHVYDAGFEDLVKRGE
Ga0187853_103306162	3300017940	Peatland	VKFAGERLRLSASDVANFVACQHMTRLDLLEARGTLHRPRRFDVGFEDLVQ
Ga0187819_101362873	3300017943	Freshwater Sediment	MKAIEGRLRVSASDVANFLACQQLTQLDLQRARGELRPPHARDLGLDEL
Ga0187783_108760452	3300017970	Tropical Peatland	VRIIDGQVRLAASDVANFLACRHLTRLDLLHARKLIDPPRFYDAGFEDL
Ga0187781_112379851	3300017972	Tropical Peatland	VRIIDGQVRLAASDVANFLACRHLTRLDLLRARGVIEPPRFYD
Ga0187816_100456311	3300017995	Freshwater Sediment	VRIIDGQVRLAASDVANFLACRHLTRLDLLRARGVISPPYFS
Ga0206356_119043391	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRPPREFDIGFQDLV
Ga0210395_112058361	3300020582	Soil	MKFTEGRLRLAASDVANFLACRRLTQLDLLMARDELEPPRKYDIGFQDLVRR
Ga0210401_111723872	3300020583	Soil	MRIVEGRVRVAASDVANFLACQELTQLDLRAARRTLRPPHPRDLGLEDLV
Ga0210405_107146101	3300021171	Soil	MKITEGRLRLAASDVANFLACRRLTQLDLLMARDELEPPRKYDIGFQDLVRGGEV
Ga0210408_107552871	3300021178	Soil	MKITEGRVRLAASDVANFLACRRLTQMDLLRARGELR
Ga0210408_109763601	3300021178	Soil	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGGLRPPREFDIGFQDLVRRGEVH
Ga0210385_104234893	3300021402	Soil	VKVIDSGLRLSASDVANFLACQHLTRLDLLAARGELKPPREVDVGFLDL
Ga0210389_109985193	3300021404	Soil	VRVIDIGLRLSASDVANFLACQHLTRLDLLAARGELKPPREVDVGFL
Ga0210402_112947351	3300021478	Soil	MKITEGRLRLAASDVANFLACRRLTQLDLLLARAELEPPRKYDIGFPAL
Ga0210410_114096402	3300021479	Soil	MKVTDGRVRLAASDVANFLACRRLTQLDLARARGELRPPREF
Ga0126371_104509051	3300021560	Tropical Forest Soil	VRIIDGQVRLSASDVANFLACRHLTRLELLHARDL
Ga0126371_133576892	3300021560	Tropical Forest Soil	MRIDGEQVRLSASDVANFLACRHLTRLDLLRARGVISPP
Ga0247661_10172041	3300024254	Soil	MKISEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPREFDIG
Ga0207692_112149361	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKLQAGRLRLSASDVANFLACHHLTRLDMLSAQGKLRPPHAYDAGF
Ga0207645_104411992	3300025907	Miscanthus Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLAWARGEMRPPREFDIGFRDLV
Ga0207649_100173811	3300025920	Corn Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRPP
Ga0207664_112031141	3300025929	Agricultural Soil	VKIISGRLRLSASDVANFLACQHLTRLDLLHARGELQPRHVYDIGFASL
Ga0207712_105929673	3300025961	Switchgrass Rhizosphere	MKITEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPREFDIG
Ga0207668_104462612	3300025972	Switchgrass Rhizosphere	MKISEGRVRLAASDVANFLACRRLTQLDLAWARGELRPPREFDI
Ga0208099_10007333	3300027096	Forest Soil	MKIIEGRVRVAASDVANFLACQELTQLDLRAARGTLRPPHPVDLGF
Ga0209420_10589561	3300027648	Forest Soil	MKIVEGRVRVAASDVANFLACQELTQLDLRAARGALRPPHPVDLGFEDLV
Ga0207862_10590991	3300027703	Tropical Forest Soil	VKIADGRLRLSASNIANFLACQHLTRLDLLRARGELRPPREFDIGFADLI
Ga0209178_11884152	3300027725	Agricultural Soil	MKVTDGRVRVAASDVANFLACRRLTQLDLARARGELRPPHARDL
Ga0209139_100644211	3300027795	Bog Forest Soil	MRIVEGRVRVAASDVANFLACQELTQLDLRAARRTLRP
Ga0209112_101017502	3300027817	Forest Soil	MRFAGDRLRVSASDVANFLACQRLTSLDLRRASGELKPP
Ga0209274_103806662	3300027853	Soil	MKIIEGHVRLAASDVANFLACQRLTQLDLLRARGEL
Ga0209517_100230581	3300027854	Peatlands Soil	MKITEGRVRLAASDVANFLACRRLTQLDLLRAGAVLE
Ga0209415_101038623	3300027905	Peatlands Soil	MKIIEGRVRLAASDVANFLACRRLTQLDLLRARGELRP
Ga0302223_100317074	3300028781	Palsa	MKIIGGRVRLAASDVANFLACRRLTQLDLLRARGE
Ga0307282_105519401	3300028784	Soil	MKITEGRVRLAASDVANFLACRRLTQLDLLRARGELRPPREF
Ga0302146_101450611	3300028867	Bog	VKFAGERLRLSASDVANFVACQHMTRLDLLEARGTL
Ga0302146_104294762	3300028867	Bog	MKFAGDRLRLSASDVANFVACQHMTRLDLLEAQGRLH
Ga0311371_114580321	3300029951	Palsa	MKIIGGRVRLAASDVANFLACRRLTQLDLLRARGELR
Ga0302179_103314311	3300030058	Palsa	MKIIGGRVRLAASDVANFLACRRLTQLDLLRARGELRPPR
Ga0311353_111598323	3300030399	Palsa	MKFAEDRLRLSASDVANFVACQHTTRLDLLEARGRLHRPRRFDV
Ga0302184_1000389313	3300030490	Palsa	MKIIGGRVRLAASDVANFLACQRLTQLDLLRARGELRPPREYDVGFAEL
Ga0302184_101605971	3300030490	Palsa	MQVTGGRVRVSASDVANFLACRRLTQLDLRRARGELRPPREFDVGFQELV
Ga0311354_104290274	3300030618	Palsa	MKFAEDRLRLSASDVANFVACQHTTRLDLLEARGRLHRPRRFDVGFEDLVQR
Ga0310039_103549641	3300030706	Peatlands Soil	MKIIEGRVRVSASDVANFLACQELTQLDLRAAQRT
Ga0310038_100679151	3300030707	Peatlands Soil	MKIIAGRVRVAASDVANFLDCRRLTQLDLLRAQRELEPPR
Ga0302311_105570283	3300030739	Palsa	MKIVGGRVRLSASDVANFLACRRLTQLDLARARGELRPPREFDV
Ga0170824_1235234721	3300031231	Forest Soil	VKVDAGRLRLAASDVANFLACGHLTRLDMLAARGQLRPPQEYDVGFQDLVARGE
Ga0302325_104900321	3300031234	Palsa	MKITSGQLRLSASDVSNFLACQQLTQLDLQAARGERRPTRDYDIGFQDLVRRG
Ga0302325_109031921	3300031234	Palsa	MKITEGRLRLSASDVANFLACQQLTQLDLQAARRERRPAR
Ga0302325_111139323	3300031234	Palsa	MKIIEGTLRVAASDVTNFLACQELTQLDLRKARGT
Ga0302326_125461271	3300031525	Palsa	MKVIEGTLRVAASDVANFLACQELTQLDLRRARGTLQPPHPRDLGF
Ga0318534_106424672	3300031544	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARGELDPPYASDLGFRELVERGE
Ga0318528_106615611	3300031561	Soil	VKIPGGRLRLSASDVANFLACQHLTRLDLLRARGELR
Ga0318560_101118752	3300031682	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARAELYPPYVSDLGFREL
Ga0310686_1109719891	3300031708	Soil	MKITESRLRLSASDVANYLACQHLTQLDLQMAQGRLRPPHEFDI
Ga0310686_1124083441	3300031708	Soil	VWLDGGRLRLSASDVANFVACGHLTRLDLLRARGEIRPPREF
Ga0310686_1128622594	3300031708	Soil	VKLEAGRLRVAASDVANFLACGHLTRLDLLSARGQLRPPDE
Ga0318496_100168601	3300031713	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARAELYPPY
Ga0318496_102563922	3300031713	Soil	VRITGGRLRLSASDVANFLACQHLTRLDLLRARGQLHPPHEFD
Ga0318501_104254451	3300031736	Soil	VRLAASDVANFLACRHLTRLDLLRARGVIDPPHLYDAGFE
Ga0318502_100819671	3300031747	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLRARGELHPPYESDLGFQELVE
Ga0318492_100107453	3300031748	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARAELYPPYASDLGFRELVERGEAHER
Ga0318494_107311551	3300031751	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARAELYPPYVSDLGFRELVERGEAHERAVLD
Ga0318509_107739691	3300031768	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLRARGELHPPYESDLGFQELVERGE
Ga0318521_101003791	3300031770	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARGEL
Ga0318521_101815501	3300031770	Soil	VKITGGRLRLSASDVANFLACQHLTRLDLLRARGQLHPPHEFD
Ga0302319_107065922	3300031788	Bog	VKFAGERLRLSASDVANFVACQHMTRLDLLEARGT
Ga0318529_103047121	3300031792	Soil	VKIPGGRLRLSASDVANFLACQHLTRLDLLRARGELRPPHEFDIGFTDLAE
Ga0318548_104411181	3300031793	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLRARGELHPLYESD
Ga0318557_105973012	3300031795	Soil	VKIPGGRLRLSASDVANFLACQHLTRLDLLRARGELRPPHE
Ga0318567_102090142	3300031821	Soil	MRVIEGRPLRLAASDVANFLACQQLTQLDLQAARGELR
Ga0318517_103533042	3300031835	Soil	VRITGGRLRLSASDVANFLACQHLTRLDLLRARGQLHPPHEFDIGFADLIERGD
Ga0318512_100203361	3300031846	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLRARGELHPPHEFDIG
Ga0310912_104580872	3300031941	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARAELYPPYVSDLGFRELVERGEAHERAV
Ga0306926_104088841	3300031954	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLRARGELHPPYESDLGFQELVER
Ga0306926_129434182	3300031954	Soil	VRITEGRLRLAASDVAGFLACQQLTRLELLRARGELRPPRAADLGFEELIDFITA
Ga0318530_101709862	3300031959	Soil	VRIIEGRVRLAASDVANFLACRHLTRLDLLRARGVIDPPHQY
Ga0306922_112399043	3300032001	Soil	MKISESGLRLAASDVANFLACRHLTRLDLRMAQGTLRPPHEADIG
Ga0318559_100580513	3300032039	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARAELYPP
Ga0318549_105638722	3300032041	Soil	MKIIEDRVRVAASDVANFLACQQLTQLDLQRARGTLRPPHARDLG
Ga0318575_103018631	3300032055	Soil	VKITGGRLRLSASDVANFLACQHLTRLDLLRARGQLHPPHEFDI
Ga0318505_102301931	3300032060	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLRARGELHPPYE
Ga0318577_100625961	3300032091	Soil	MRITGDGVRLAASDVANFLACQHLTRLDLLMARAELYPPYVSDLGFRE
Ga0318577_102693822	3300032091	Soil	VKIPGGRLRLSASDVANFLACQHLTRLDLLRARGELRPPHEFDIGFTDLAERGN
Ga0311301_102045191	3300032160	Peatlands Soil	VSVSDVANFLACQQLTQLDLRAAREELRPPQAVDLG
Ga0307471_1024420171	3300032180	Hardwood Forest Soil	MKMTEGQVRVSASDVANFLACQQLTQLDLQAARRTLRPPHARDL
Ga0335074_113944351	3300032895	Soil	MKIVEDRVRVAASDVANFLACQVLTQLDLRAAWGALEPPQAVDLGFED
Ga0335075_102723524	3300032896	Soil	MRIDGEQVRLSASDVANFLACRHLTRLELLNARRL
Ga0335075_104022321	3300032896	Soil	MKIDAGQLRLSASDVANFLACRHLTRLELLRARGVIRPPFANDA
Ga0335075_117394972	3300032896	Soil	MKIDGGQLRLSASDVANFLACRHLTRLELLRARGVTWPPFAYDAGFEDLVAR
Ga0335072_100140441	3300032898	Soil	VRLDGERLRLSASDVANFVACGHLTRLDLLRARGEIRPPRAFDLGFKDLVARGE

Hidden Markov Model


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