Metagenome / Metatranscriptome Family F048673

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048673
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	36 residues
Representative Sequence	MRTFAMLLILVAIAASQPHHWLSVVMAAIAHLLGR
Number of Associated Samples	103
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.27 %
% of genes near scaffold ends (potentially truncated)	3.38 %
% of genes from short scaffolds (< 2000 bps)	60.81 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (93.919 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (9.460 % of family members)
Environment Ontology (ENVO)	Unclassified (35.135 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.676 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 1JGIcombinedJ13530_1005120152 2JGI1356J14229_100095897 3Ga0070741_1002802611 4Ga0073903_103645792 5Ga0073900_101719812 6Ga0074478_15983732 7Ga0074471_109040733 8Ga0074470_103367308 9Ga0074470_109064512 10Ga0074470_109384252 11Ga0075275_10002939 12Ga0075274_10307392 13Ga0075273_100076845 14Ga0075157_102376852 15Ga0075156_100859162 16Ga0075012_103229691 17Ga0069787_1000629718 18Ga0069787_1001028016 19Ga0069787_1002183319 20Ga0069787_100693302 21Ga0073934_1000155357 22Ga0073934_1000675712 23Ga0073934_101376574 24Ga0075472_100733913 25Ga0073932_100007845 26Ga0073932_10479833 27Ga0103961_11721142 28Ga0104751_10039248 29Ga0104751_10482444 30Ga0105044_100155065 31Ga0102946_10001488 32Ga0100380_100854594 33Ga0100390_103201242 34Ga0115027_118947861 35Ga0105092_101022763 36Ga0115028_103590551 37Ga0115028_104026871 38Ga0115028_105761112 39Ga0115028_115415601 40Ga0103747_101521092 41Ga0073899_103676122 42Ga0116142_100939491 43Ga0116144_102134513 44Ga0116166_1000013138 45Ga0116166_100066631 46Ga0130016_100017465 47Ga0130016_1000258916 48Ga0130016_101365642 49Ga0130016_104838322 50Ga0116204_100354713 51Ga0116204_11228092 52Ga0116249_102668762 53Ga0136852_111839172 54Ga0137331_10141722 55Ga0137333_10008856 56Ga0137446_10827332 57Ga0137438_10995812 58Ga0137451_12528471 59Ga0119867_11414822 60Ga0137338_10766102 61Ga0137338_11150251 62Ga0137334_10006347 63Ga0137459_11278821 64Ga0137459_12603102 65Ga0137465_12386792 66Ga0138256_104583902 67Ga0138256_107460712 68Ga0154020_101422943 69Ga0154020_101663532 70Ga0172368_100458471 71Ga0172368_104428682 72Ga0172368_104535821 73Ga0172367_104348382 74Ga0172367_105213132 75Ga0172373_100646385 76Ga0172373_107278801 77Ga0172370_102917242 78Ga0173609_108393392 79Ga0119894_10012941 80Ga0075358_11183021 81Ga0075317_11133531 82Ga0075317_11873861 83Ga0180060_10610832 84Ga0180088_11009552 85Ga0180063_10221922 86Ga0163144_100508598 87Ga0184615_100571943 88Ga0190269_114223742 89Ga0207193_10644332 90Ga0194120_1001781813 91Ga0194120_104614952 92Ga0163152_1000779712 93Ga0226835_100004480 94Ga0226835_100013075 95Ga0212093_1000167154 96Ga0210022_10042598 97Ga0209835_10082352 98Ga0210058_11589222 99Ga0209381_11543102 100Ga0209172_10000016186 101Ga0209172_100163423 102Ga0208244_1063442 103Ga0209204_100089615 104Ga0209204_100090533 105Ga0209204_10068826 106Ga0209200_13039122 107Ga0208139_10023862 108Ga0207999_10188062 109Ga0209939_10004428 110Ga0209053_10221222 111Ga0209573_10011396 112Ga0209063_10735242 113Ga0209819_100690822 114Ga0209277_100097156 115Ga0209277_100529052 116Ga0209812_103258312 117Ga0209514_1000117419 118Ga0209591_103772512 119Ga0209066_100145755 120Ga0209066_100200336 121Ga0209450_112947041 122Ga0209496_103386152 123Ga0268298_1000073038 124Ga0268298_100034082 125Ga0268298_100447724 126Ga0268298_100941482 127Ga0268298_102782602 128Ga0268298_104961072 129Ga0246236_10102273 130Ga0246236_10134622 131Ga0311336_104912472 132Ga0311364_117025092 133Ga0302322_1022049302 134Ga0315295_106925522 135Ga0315268_1000008519 136Ga0315268_101755762 137Ga0315268_105841332 138Ga0315268_106509152 139Ga0315268_123475972 140Ga0334722_103142081 141Ga0316625_1003337761 142Ga0316621_102899292 143Ga0316621_106634632 144Ga0316616_1029149102 145Ga0316616_1037030252 146Ga0370490_0077178_482_589 147Ga0370506_098957_240_347 148Ga0370507_0188310_468_575
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50 1JGIcombinedJ13530_1005120152 2JGI1356J14229_100095897 3Ga0070741_1002802611 4Ga0073903_103645792 5Ga0073900_101719812 6Ga0075275_10002939 7Ga0075472_100733913 8Ga0073932_100007845 9Ga0103961_11721142 10Ga0102946_10001488 11Ga0100380_100854594 12Ga0105092_101022763 13Ga0116166_1000013138 14Ga0130016_104838322 15Ga0137451_12528471 16Ga0190269_114223742 17Ga0268298_100034082 18Ga0311364_117025092 19Ga0334722_103142081 20Ga0316625_1003337761 21Ga0370490_0077178_482_589
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34. 1Ga0315268_123475972 2JGIcombinedJ13530_1005120152 3Ga0070741_1002802611 4Ga0073900_101719812 5Ga0074471_109040733 6Ga0074470_109064512 7Ga0075275_10002939 8Ga0075273_100076845 9Ga0075012_103229691 10Ga0069787_1000629718 11Ga0069787_1002183319 12Ga0069787_100693302 13Ga0073934_101376574 14Ga0075472_100733913 15Ga0103961_11721142 16Ga0104751_10039248 17Ga0102946_10001488 18Ga0100390_103201242 19Ga0105092_101022763 20Ga0115028_103590551 21Ga0115028_115415601 22Ga0116166_100066631 23Ga0130016_1000258916 24Ga0130016_101365642 25Ga0137333_10008856 26Ga0137451_12528471 27Ga0119867_11414822 28Ga0137334_10006347 29Ga0137459_12603102 30Ga0137465_12386792 31Ga0172368_104535821 32Ga0172367_105213132 33Ga0172373_100646385 34Ga0172373_107278801 35Ga0173609_108393392 36Ga0119894_10012941 37Ga0075358_11183021 38Ga0075317_11133531 39Ga0075317_11873861 40Ga0180060_10610832 41Ga0180063_10221922 42Ga0163144_100508598 43Ga0190269_114223742 44Ga0194120_1001781813 45Ga0194120_104614952 46Ga0226835_100004480 47Ga0226835_100013075 48Ga0209835_10082352 49Ga0209381_11543102 50Ga0208244_1063442 51Ga0209204_100089615 52Ga0209204_100090533 53Ga0209514_1000117419 54Ga0209496_103386152 55Ga0268298_100034082 56Ga0311364_117025092 57Ga0315268_1000008519 58Ga0315268_105841332 59Ga0315268_106509152 60Ga0334722_103142081 61Ga0316621_102899292 62Ga0370490_0077178_482_589
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.79% β-sheet: 0.00% Coil/Unstructured: 49.21%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF01807	zf-CHC2	11.49
PF13155	Toprim_2	10.81
PF00436	SSB	5.41
PF04002	RadC	3.38
PF01656	CbiA	2.03
PF04014	MazE_antitoxin	2.03
PF02604	PhdYeFM_antitox	1.35
PF02768	DNA_pol3_beta_3	1.35
PF00712	DNA_pol3_beta	0.68
PF13208	TerB_N	0.68

Showing 1 to 10 of 32 entries

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COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	11.49
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	5.41
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	5.41
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	3.38
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	2.03
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.35
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.35
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.68
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.68
COG1720	tRNA (Thr-GGU) A37 N6-methylase	Translation, ribosomal structure and biogenesis [J]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.92 %
Unclassified	root	N/A	6.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.92 %
Unclassified	root	N/A	6.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.92 %
Unclassified	root	N/A	6.08 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.81 %
Unclassified	root	N/A	6.08 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	85.14 %
Unclassified	root	N/A	6.08 %

Name	Rank	Taxonomy	Distribution
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	16.22 %
Unclassified	root	N/A	6.08 %

Name	Rank	Taxonomy	Distribution
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	14.19 %
Unclassified	root	N/A	6.08 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.68 %

Name	Rank	Taxonomy	Distribution
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	12.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.68 %
Unclassified	root	N/A	6.08 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	1.35 %

Name	Rank	Taxonomy	Distribution
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.68 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1.35 %
Unclassified	root	N/A	6.08 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	12.84 %

Name	Rank	Taxonomy	Distribution
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	12.84 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.68 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1.35 %
Unclassified	root	N/A	6.08 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300013123\|Ga0172368_10045847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2989	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10442868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	576	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10453582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	567	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10434838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	734	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10521313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	649	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10064638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3007	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10727880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	583	Open in IMG/M
(restricted) 3300013136\|Ga0172370_10291724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	949	Open in IMG/M
3300001213\|JGIcombinedJ13530_100512015	Not Available	541	Open in IMG/M
3300001380\|JGI1356J14229_10009589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6648	Open in IMG/M

Showing 1 to 10 of 148 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	29.05%
Environmental	Environmental	70.95%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	52.03%
Bioreactor	Engineered → Bioreactor	1.35%
Terrestrial	Environmental → Terrestrial	18.92%
Wastewater	Engineered → Wastewater	27.70%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	12.84%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.35%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	6.08%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.38%
Freshwater	Environmental → Aquatic → Freshwater	30.41%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.35%
Marine	Environmental → Aquatic → Marine	1.35%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	7.43%
Peat	Environmental → Terrestrial → Peat	2.03%
Sediment	Environmental → Aquatic → Sediment	14.19%
Soil	Environmental → Terrestrial → Soil	13.51%
Thermal Springs	Environmental → Aquatic → Thermal Springs	6.08%

Habitat	Taxonomy	Distribution
Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer	1.35%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	4.05%
Coastal	Environmental → Aquatic → Marine → Coastal	0.68%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Fracking Water	1.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.08%
Ice	Environmental → Aquatic → Freshwater → Ice	1.35%
Lake	Environmental → Aquatic → Freshwater → Lake	16.22%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.68%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.08%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	6.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.19%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	12.84%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	6.08%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	3.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.35%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.35%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.68%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.16%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.68%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge	2.70%
Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor	1.35%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.35%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.35%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.41%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.68%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.19%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	12.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	10.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.08%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	6.08%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	6.08%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	4.73%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	3.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.35%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Fracking Water → Unclassified	1.35%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified	1.35%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.35%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.68%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.68%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	4.05%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	2.70%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.68%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	1.35%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	1.35%
Anaerobic Bioreactor Biomass	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Bioreactor Biomass	1.35%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	6.08%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	2.03%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.68%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	2.70%
Deep Subsurface Aquifer	Environmental → Terrestrial → Deep Subsurface → Aquifer → Unclassified → Deep Subsurface Aquifer	1.35%
Enhanced Biological Phosphorus Removal Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Activated Sludge → Enhanced Biological Phosphorus Removal Bioreactor	2.70%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.03%
Fracture Fluid	Environmental → Terrestrial → Deep Subsurface → Fracking Water → Unclassified → Fracture Fluid	1.35%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.41%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.35%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.03%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.68%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.68%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	6.08%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.03%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.73%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.68%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.38%
Serpentinite Rock And Fluid	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Serpentinite Rock And Fluid	0.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.03%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	2.70%
Wastewater	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater	0.68%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	3.38%
Wastewater Sludge	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wastewater Sludge	0.68%
Wastewater Treatment	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Wastewater Treatment	1.35%
Watersheds	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds	2.03%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.05%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.68%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005657	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_bulk	Engineered	Open in IMG/M
3300005659	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Kit	Engineered	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M

Showing 1 to 10 of 103 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1005120152	3300001213	Wetland	MRTLAILFFLIAIAASQPHHWLLVVMAFIARTLGA*
JGI1356J14229_100095897	3300001380	Groundwater	MSILAMLLILVAVAASQPYHWFSLVMASIAHCLGG*
Ga0070741_1002802611	3300005529	Surface Soil	MRTLALLLILVAIAASQPHDWLSVVIASLAHCLGK*
Ga0073903_103645792	3300005657	Activated Sludge	MIMRTFALLLILVAIAASQPHHWLSEIMAAIAHCIGR*
Ga0073900_101719812	3300005659	Activated Sludge	MRTLAMLLILVAIAANQPYHWLSIIVAFIAQLLGG*
Ga0074478_15983732	3300005827	Sediment (Intertidal)	MRTFALLLVLVAIAASQPHHWLSVIVAAIAHILGM*
Ga0074471_109040733	3300005831	Sediment (Intertidal)	MRTLAFLLILVAFAASQPNYWLSVVMASIAHLLGR*
Ga0074470_103367308	3300005836	Sediment (Intertidal)	MRTFAMLLILVAIAASQPHHWLAVILAAIARCIGK*
Ga0074470_109064512	3300005836	Sediment (Intertidal)	MRTFALLLILVAIAASQPHHWLSVSVAAIAHILGR*
Ga0074470_109384252	3300005836	Sediment (Intertidal)	MRTFALLLVLVAIAASQPHHWLSVIMAAIAHILGM*
Ga0075275_10002939	3300005892	Rice Paddy Soil	MRTLALLLILVAIAASQPHHLLLAVMAAIARLSGM*
Ga0075274_10307392	3300005901	Rice Paddy Soil	MRTLALLLILVAIAASQPHHLLLALMAAIARLSGM*
Ga0075273_100076845	3300005902	Rice Paddy Soil	MRTLALLLILVALASSQPRHLLLALMAAIARLSGM*
Ga0075157_102376852	3300005961	Wastewater Effluent	MRTLAFLLILVAIAASQPNYWLSVVMASIAHLLGR*
Ga0075156_100859162	3300005982	Wastewater Effluent	MRTFALLLILVAIAASQPHHWLSEIMAAIARCIGK*
Ga0075012_103229691	3300006033	Watersheds	MRTFALLLILVAIAASQPHHWLSVIMVAIIRRIGK*
Ga0069787_1000629718	3300006417	Enhanced Biological Phosphorus Removal Bioreactor	MRTFALLLILVAIAASQPHHWLAVCMAAIAQCLGH*
Ga0069787_1001028016	3300006417	Enhanced Biological Phosphorus Removal Bioreactor	MRTFAMLLILVAIAASQPHHWLSAIMVAIARCIGR*
Ga0069787_1002183319	3300006417	Enhanced Biological Phosphorus Removal Bioreactor	MRTFAMLLILVAIAASEPHHWLTVLMAAIAHCIGK*
Ga0069787_100693302	3300006417	Enhanced Biological Phosphorus Removal Bioreactor	MRTFAFLLIMVAIAASQPHHWLAVCMAAIAHCLGR*
Ga0073934_1000155357	3300006865	Hot Spring Sediment	MRTFAMLLILVAIAASQPHHWLTVLMAAIVRCIGK*
Ga0073934_1000675712	3300006865	Hot Spring Sediment	MRTLAILLILVAIAASQPHHWLAVLMAAIAHCICR*
Ga0073934_101376574	3300006865	Hot Spring Sediment	MIMRTFALILILVAIAASEPHHWLTVIIAAIVRCIGK*
Ga0075472_100733913	3300006917	Aqueous	MKTFAWLLILVAIAASQPQHWLAVSMAAIAHILGK*
Ga0073932_100007845	3300007072	Hot Spring Sediment	MRTFAMLLILVAIAASRRSRSVFLRGQPHHWLTVLMAAIAHCIGK*
Ga0073932_10479833	3300007072	Hot Spring Sediment	MRTLAILLILVAIAASQPHHWLSVILAAIAHLLGR*
Ga0103961_11721142	3300007216	Freshwater Lake	MKTLAMLLILVAIATSQPHRWLVVLMAAIAHCLGN*
Ga0104751_10039248	3300007351	Deep Subsurface Aquifer	MRTLAMLLILVAIAASQPHRWLSVAVAFITHLLGA*
Ga0104751_10482444	3300007351	Deep Subsurface Aquifer	MRTFAMLLILVAIAASQPHHWLTVLMAAIAHCIGK*
Ga0105044_100155065	3300007521	Freshwater	MRTLAMLLILVAIAASQPNHWLSVVMASIAHLLGR*
Ga0102946_10001488	3300007614	Soil	MRTYAFILILVAIAASQPHHWLSAVMTAITHCMGR*
Ga0100380_100854594	3300007986	Aquifer	MRTLAAFLVLIAIAASQPHHWLGIALAALAHCLGG*
Ga0100390_103201242	3300008002	Aquifer	MIMRTLAAFLVLIAIAASQPHHWLGIALAALAHCLGG*
Ga0115027_118947861	3300009131	Wetland	MRTLAMLLILVAIAASQPHHWLAVLMVAIARCIGR*
Ga0105092_101022763	3300009157	Freshwater Sediment	MRTLALILILVAIAASQPHHWFLTVMTSLTHCLGS*
Ga0115028_103590551	3300009179	Wetland	MRTYALLLILIAIAASQPHHWLLVVMEFIARILGV*
Ga0115028_104026871	3300009179	Wetland	QIMRTFAMLLILVAIAASQPHYWLSVVLAAIAHLLGR*
Ga0115028_105761112	3300009179	Wetland	MRTYAFILILIAIAASQPHHWLLVVMAFIARILGA*
Ga0115028_115415601	3300009179	Wetland	MIMRTFALLLVLVAIAASQPHHWLAVIVAAIAHILDK*
Ga0103747_101521092	3300009295	Wastewater Sludge	MRTFAMLLILVAIVASQPHHWLTVLMAAIAHCIGR*
Ga0073899_103676122	3300009540	Activated Sludge	MRTLATLLILVAIAASQPHHWLAVLMAAIASCIGR*
Ga0116142_100939491	3300009685	Anaerobic Digestor Sludge	MRTFAMLLILVAIAASQPHHWLAVLMAAIASCIGR*
Ga0116144_102134513	3300009687	Anaerobic Digestor Sludge	MRTFAMLLILVAIAASQPHHWLTVLMAAIARCIGR*
Ga0116166_1000013138	3300009711	Anaerobic Digestor Sludge	MRTLALILILVAIAASQPYHWLGSFLADLAHLLGA*
Ga0116166_100066631	3300009711	Anaerobic Digestor Sludge	MSMRTYAWLLILVAIAASQPQHWLGSFLAALARLLGE*
Ga0130016_100017465	3300009868	Wastewater	MSMRTLALLLILVAIAASQPYHWLGSFLAVLAHLLGA*
Ga0130016_1000258916	3300009868	Wastewater	MRTLALLLILVAIAASQPHHWLSAVMAALAHCLGG*
Ga0130016_101365642	3300009868	Wastewater	MSMKTHALILILVAIAASQPQHWLGSFLATLAHLLGA*
Ga0130016_104838322	3300009868	Wastewater	RMSMRTFAWLLILVAIAVSQPHLWLGSFLAPLAHFLGA*
Ga0116204_100354713	3300010293	Anoxic Lake Water	MRTLATLLILVAIAASQPHHWLAVVMAAIANCMGN*
Ga0116204_11228092	3300010293	Anoxic Lake Water	MKTLAFLLILVAIAASQPHHWLSVVLAAIAHYLGN*
Ga0116249_102668762	3300010357	Anaerobic Digestor Sludge	MRTFAMLLILVAIAASQPHHWLAVLMAAIAHCIGK*
Ga0136852_111839172	3300010412	Mangrove Sediment	MRTFAILLILVAIAASQPHHWLSVVVAAITHCIGR*
Ga0137331_10141722	3300011391	Soil	MRTLALLLILVAIAASQPNHWLSVVMASIAHLLGR*
Ga0137333_10008856	3300011413	Soil	MIMRTFALLLVLVAIAASQPHHWLALIVAAIAQILGR*
Ga0137446_10827332	3300011419	Soil	MRTLAMLLILVAIAASQPNHWLSVVMASIAHFLGR*
Ga0137438_10995812	3300011431	Soil	MIMRTFALLLVLVAIAASQPHQWLSGIVAAIAHILGM*
Ga0137451_12528471	3300011438	Soil	MRTLAMLLILVAIAVSQPNHWLSVVMASIALTLGR*
Ga0119867_11414822	3300012018	Activated Sludge	MRTFAFLLILVAIAASQPHHWLSAIMVAIAHCIGR*
Ga0137338_10766102	3300012174	Soil	MIMRTFALLLVLVAIAASQPHHWLSVIMAAIAHILGS*
Ga0137338_11150251	3300012174	Soil	MIMRTFALLLILVAIAASQPHHWLALIMAAIAHILGR*
Ga0137334_10006347	3300012179	Soil	MIMRTFALLLVLVAIAASQPHHWLSAIMAAIAHILGS*
Ga0137459_11278821	3300012228	Soil	RRMIMRTFALLLVLVAIAASQPHHWLALIVAAIAQILGR*
Ga0137459_12603102	3300012228	Soil	MIMRTFALLLILVAIAASQPYHWLSLIMAAIAHILGR*
Ga0137465_12386792	3300012231	Soil	MIMKTLALLLILVAIAASQPHHWLAVIMAAIARCIGK*
Ga0138256_104583902	3300012533	Active Sludge	MIMRTFALLLIMVAIAASQPHHWLSEIMAAIARCIGK*
Ga0138256_107460712	3300012533	Active Sludge	MRTFAFLLILVAIAASQPHHWLAVCMAAIAHCLGS*
Ga0154020_101422943	3300012956	Active Sludge	MIMRTFALLLILVAIAASQPHHWLSEIMAAIARCIGK*
Ga0154020_101663532	3300012956	Active Sludge	MRTLAMLLILVAIAASQPYHWLSVVMASIARLLGR*
(restricted) Ga0172368_100458471	3300013123	Freshwater	MRTFALLLILVAIAASQPHYWLSVVLAAIAHLRRR*
(restricted) Ga0172368_104428682	3300013123	Freshwater	MRTFALLLILVAIAASQPHHWLSVILATIAHLLGR*
(restricted) Ga0172368_104535821	3300013123	Freshwater	MKTFAWLLVLIAIAASQPQHWLGSFLAILAHLLGA*
(restricted) Ga0172367_104348382	3300013126	Freshwater	MRTFALLLILVAIAASQPHHWLSVVLAAIAHLLGR*
(restricted) Ga0172367_105213132	3300013126	Freshwater	MRTFALLLILVTIAASQPHYWLSVVLAAIAHLLGR*
(restricted) Ga0172373_100646385	3300013131	Freshwater	MRTFAILLILVAIAASQPHHWLAVVMAAIAHCLGN*
(restricted) Ga0172373_107278801	3300013131	Freshwater	MIMRTFALLLILVAIAASQPHHWLSEIMAAIARCIGR*
(restricted) Ga0172370_102917242	3300013136	Freshwater	MRTFALLLILVAIAASQPHYWLSVVLAAIAHLLGR*
Ga0173609_108393392	3300013315	Sediment	MRTFAMLLILVAIADSQPHYWLSVVLADIAHLLGR*
Ga0119894_10012941	3300013793	Wastewater	MRTLATLLILVAIAASQPHHWLAVLMAAIAHCIGK*
Ga0075358_11183021	3300014303	Natural And Restored Wetlands	MRTYAFLLILIAIAASQPHQWLLVVMAFIARILGA*
Ga0075317_11133531	3300014309	Natural And Restored Wetlands	MIMRTFATLLILVAIAASQPHHWLSVILAAIAHMVGK*
Ga0075317_11873861	3300014309	Natural And Restored Wetlands	MRTFALLLILVAIAASQPHHWLSVVLATITHLLGR*
Ga0180060_10610832	3300014863	Soil	MRTFALLLVLVAIAASQPHHWLSVIVTAIAHILGM*
Ga0180088_11009552	3300014868	Soil	MRTFALLLILVAIAASQPHHWLAVIVAAIAHILGM*
Ga0180063_10221922	3300014885	Soil	MRTFALLLILVAIAASQPHHWLSVIVAAITHCMGR*
Ga0163144_100508598	3300015360	Freshwater Microbial Mat	MRTLAMLLTLVAIAASQPNHWLSVVMASIAHLLGR*
Ga0184615_100571943	3300018059	Groundwater Sediment	MRTFALLLILVAIAASQPHHWLAVILAAIAHILGR
Ga0190269_114223742	3300018465	Soil	MRTFALLLILVAIAASQPHQWLILMLQSILHCISS
Ga0207193_10644332	3300020048	Freshwater Lake Sediment	MRTLAMLLILVAIAASQPHQWLSVVMASIAHLLGR
Ga0194120_1001781813	3300020198	Freshwater Lake	MRTLATLLILVAIAASQPHHWLAVVMAAIANCMGN
Ga0194120_104614952	3300020198	Freshwater Lake	MRTFAMLLILVAIAASQPHYWLTVIMVAIARCIGR
Ga0163152_1000779712	3300020213	Freshwater Microbial Mat	MRTLAMLLTLVAIAASQPNHWLSVVMASIAHLLGR
Ga0226835_100004480	3300021604	Anaerobic Bioreactor Biomass	MRTLAWLLILVALAASQPQHWLGSFLAALAHLLGA
Ga0226835_100013075	3300021604	Anaerobic Bioreactor Biomass	MRTFAWLLILVAIAVSQPHHWLGSFLATLAHLLGA
Ga0212093_1000167154	3300022554	Hot Spring Sediment	MRTFAMLLILVAIAASRRSRSVFLRGQPHHWLTVLMAAIAHCIGK
Ga0210022_10042598	3300025017	Aquifer	MRTLAAFLVLIAIAASQPHHWLGIALAALAHCLGG
Ga0209835_10082352	3300025115	Anoxic Lake Water	MKTLAFLLILVAIAASQPHHWLSVVLAAIAHYLGN
Ga0210058_11589222	3300025124	Aquifer	MIMRTLAAFLVLIAIAASQPHHWLGIALAALAHCLGG
Ga0209381_11543102	3300025161	Hot Spring Sediment	MRTLAILLILVAIAASQPHHWLSVILAAIAHLLGR
Ga0209172_10000016186	3300025310	Hot Spring Sediment	MRTFAMLLILVAIAASQPHHWLTVLMAAIVRCIGK
Ga0209172_100163423	3300025310	Hot Spring Sediment	MRTLAILLILVAIAASQPHHWLAVLMAAIAHCICR
Ga0208244_1063442	3300025525	Serpentinite Rock And Fluid	MRTFAMLLILVAIAASQPHHWLAVLMAAIARCIGR
Ga0209204_100089615	3300025631	Anaerobic Digestor Sludge	MRTFAWLLILVAIAASQPQHWLGNFLAVLARLLGG
Ga0209204_100090533	3300025631	Anaerobic Digestor Sludge	MRTLALILILVAIAASQPYHWLGSFLADLAHLLGA
Ga0209204_10068826	3300025631	Anaerobic Digestor Sludge	MRTYAWLLILVAIAASQPQHWLGSFLAALARLLGE
Ga0209200_13039122	3300025784	Anaerobic Digestor Sludge	MRTFAMLLILVAIAASQPHHWLAVLMAAIASCIGR
Ga0208139_10023862	3300025982	Rice Paddy Soil	MRTLALLLILVAIAASQPHHLLLAVMAAIARLSGM
Ga0207999_10188062	3300026010	Rice Paddy Soil	MRTLALLLILVAIAASQPHHLLLALMAAIARLSGM
Ga0209939_10004428	3300026135	Soil	MRTYAFILILVAIAASQPHHWLSAVMTAITHCMGR
Ga0209053_10221222	3300026282	Wastewater Treatment	MRTFAMLLILVAIAASQPHHWLTVLMAAIARCIGR
Ga0209573_10011396	3300026516	Wastewater Treatment	MRTFAVLLILVAIAASQPHHWLAVCMAAIAHCLGR
Ga0209063_10735242	3300027705	Activated Sludge	MRTFAMLLILVAIAASQPNYWLSVVMASIAHLLGR
Ga0209819_100690822	3300027722	Freshwater Sediment	MRTLALILILVAIAASQPHHWFLTVMTSLTHCLGS
Ga0209277_100097156	3300027776	Wastewater Effluent	MRTLAFLLILVAIAASQPNYWLSVVMASIAHLLGR
Ga0209277_100529052	3300027776	Wastewater Effluent	MIMRTFALLLILVAIAASQPHHWLSEIMAAIARCIGK
Ga0209812_103258312	3300027786	Wastewater Effluent	MRTLAFLLILVAIAASQPNHWLSVVMASIAHLLGR
Ga0209514_1000117419	3300027819	Groundwater	MSILAMLLILVAVAASQPYHWFSLVMASIAHCLGG
Ga0209591_103772512	3300027850	Freshwater	MRTLAMLLILVAIAASQPNHWLSVVMASIAHLLGR
Ga0209066_100145755	3300027851	Watersheds	MRTFALLLILVAIAASQPHHWLSVIMVAIIRRIGK
Ga0209066_100200336	3300027851	Watersheds	MRTFAMLLILVAIAASQPHHWLTVLMAAIAHCIGK
Ga0209450_112947041	3300027885	Freshwater Lake Sediment	MRTFALLLILVAIAASQPHHWLSVVLAAIAHLLGR
Ga0209496_103386152	3300027890	Wetland	MRTLAMLLILVAIAASQPHHWLTVIMVAIAHCIGK
Ga0268298_1000073038	3300028804	Activated Sludge	MRTFAMLLILVAIAASQPHHWLSAIMAAIARCIGR
Ga0268298_100034082	3300028804	Activated Sludge	MRTFAILLILVAIAASQPHHWLTVVLAASAQCMGH
Ga0268298_100447724	3300028804	Activated Sludge	MRTLAMLLILVAIAASQPYHWLSVVMASIARLLGR
Ga0268298_100941482	3300028804	Activated Sludge	MRTFAMLLILVAIAASQPHHWLAVLMAAIAHCIGR
Ga0268298_102782602	3300028804	Activated Sludge	MRTFAMLLILVAIAASQPHHWLTVIMVAIAHCIGK
Ga0268298_104961072	3300028804	Activated Sludge	IMRTFATLLILVAIAASQPHHWLTVLMAAIAHCIGR
Ga0246236_10102273	3300029893	Fracture Fluid	MRTLAMLLILVAIAASQPHHWLAVLMAAIAHCMGT
Ga0246236_10134622	3300029893	Fracture Fluid	MRTFAMLLILVAIAASQPHHWLTVLMAVIARCIGR
Ga0311336_104912472	3300029990	Fen	MRTLAMLLILVAIAASQPNHWLSVVMASIAHFLGR
Ga0311364_117025092	3300031521	Fen	MRTLTFMLILVAIAASQPHHWLSVIMATLVHFLGA
Ga0302322_1022049302	3300031902	Fen	MRTFALLLVLVAIAASQPQHWLSLIVAAIAHILGR
Ga0315295_106925522	3300032156	Sediment	MRTLAMLLILVAIAASQPYHWLSVVMASIAHTLGR
Ga0315268_1000008519	3300032173	Sediment	MRTLAMLLILVAVAVSQPYHWLSVAMASIAHCLGR
Ga0315268_101755762	3300032173	Sediment	MRTLAMLLILVAIAASQPNHWLSVVMASIAHILGR
Ga0315268_105841332	3300032173	Sediment	MRTIALLLILVAIAASQPFYWLGSFLALLTHLLNG
Ga0315268_106509152	3300032173	Sediment	MRTYAFILILIAIAASQPHHWLLLVMAFIARTLGV
Ga0315268_123475972	3300032173	Sediment	MRTFAMLLILVAIAASQPHHWLSVVMAAIAHLLGR
Ga0334722_103142081	3300033233	Sediment	MRTLAMLLFLTAIAASQPHTWLTALMAFLARMPGG
Ga0316625_1003337761	3300033418	Soil	ERSPIMRTYAFILILIAIAASQPHHWLLVVITFIARTLGV
Ga0316621_102899292	3300033488	Soil	MRTLATLLILVAIAASQPHHWLSVVMATIAHILGR
Ga0316621_106634632	3300033488	Soil	MRTLAFLLILVAIAASQPHHWLSVVMAAIAHLLGR
Ga0316616_1029149102	3300033521	Soil	MRTYAFILILIAIAASQPHHWLLVVMAFIARILGV
Ga0316616_1037030252	3300033521	Soil	MRTFALLLILVAIAASQPHHWLAIIMAAIARCMGR
Ga0370490_0077178_482_589	3300034128	Untreated Peat Soil	MRTFALFLVLIAIAASQPHHWLTALMAFIARTLGV
Ga0370506_098957_240_347	3300034157	Untreated Peat Soil	MRTLAMLLILVAIAASQPNHWLSVVMASVAHLLGR
Ga0370507_0188310_468_575	3300034158	Untreated Peat Soil	MRTYALLLILIAIAASQPHHWLLVVMEFIARILGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters