Metagenome / Metatranscriptome Family F048650

Basic Information
Family ID	F048650
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	70 residues
Representative Sequence	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIAT
Number of Associated Samples	135
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.15 %
% of genes near scaffold ends (potentially truncated)	77.03 %
% of genes from short scaffolds (< 2000 bps)	75.68 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (79.730 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.135 % of family members)
Environment Ontology (ENVO)	Unclassified (39.189 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.622 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110 1Iowa-Corn-GraphCirc_01913900 2F24TB_147600572 3JGI11643J11755_114127562 4JGI10216J12902_1041619321 5JGI10216J12902_1214026501 6F14TB_1073977312 7Ga0055471_102749542 8Ga0055468_101892062 9Ga0055466_101704671 10Ga0055465_103635432 11Ga0055493_100502212 12Ga0062590_1022380731 13Ga0063356_1007365311 14Ga0063356_1044211132 15Ga0065717_10084742 16Ga0065714_104974761 17Ga0065715_105572651 18Ga0065705_103245481 19Ga0065707_102633472 20Ga0070683_1012320562 21Ga0066388_1018463291 22Ga0070660_1013571012 23Ga0070692_104053571 24Ga0070675_1012515131 25Ga0070673_1009699932 26Ga0070673_1014281371 27Ga0070667_1003069151 28Ga0070667_1023318631 29Ga0070703_102556402 30Ga0070700_1008869011 31Ga0070694_1017240931 32Ga0066681_100207215 33Ga0068853_1023369581 34Ga0066697_103149832 35Ga0070686_1007770651 36Ga0070696_1019924782 37Ga0070704_1011648121 38Ga0068857_1007867671 39Ga0068863_1012637072 40Ga0068858_1013158341 41Ga0068860_1006109102 42Ga0066653_100107335 43Ga0075428_1002858644 44Ga0075433_109232551 45Ga0075434_1017307602 46Ga0075436_1008739002 47Ga0079219_101782331 48Ga0079218_120635742 49Ga0105106_110878911 50Ga0105107_104228081 51Ga0105107_108477461 52Ga0105250_104520622 53Ga0105240_105615241 54Ga0111539_101157634 55Ga0075418_111978012 56Ga0105247_105731722 57Ga0114129_103009041 58Ga0114129_109385622 59Ga0075423_109518131 60Ga0105100_102523351 61Ga0113563_132530541 62Ga0105241_110337962 63Ga0126314_114550862 64Ga0126380_110844371 65Ga0134086_100230444 66Ga0134065_100115091 67Ga0134127_125020742 68Ga0134127_129917371 69Ga0134122_103210513 70Ga0134121_107460002 71Ga0134123_101721991 72Ga0134123_115413072 73Ga0137446_10725452 74Ga0137427_104060521 75Ga0137459_10438553 76Ga0137361_111647321 77Ga0157348_10184152 78Ga0137358_103617221 79Ga0137395_111037172 80Ga0137410_112198282 81Ga0164305_121364432 82Ga0157370_102188874 83Ga0157375_111544281 84Ga0157375_130497992 85Ga0075325_11639041 86Ga0075310_11090962 87Ga0075331_11750501 88Ga0180087_10658231 89Ga0180084_11086821 90Ga0180086_10310452 91Ga0180067_11539682 92Ga0182007_101573272 93Ga0132255_1018010891 94Ga0132255_1018982741 95Ga0132255_1037524481 96Ga0190266_112620412 97Ga0187776_109096481 98Ga0184608_101458861 99Ga0184609_101395252 100Ga0184629_104240391 101Ga0190272_110663881 102Ga0190270_125808922 103Ga0190271_111641981 104Ga0180115_12019612 105Ga0184642_10939001 106Ga0193712_10402012 107Ga0193707_10899422 108Ga0193727_11088032 109Ga0193726_12250142 110Ga0193709_10926941 111Ga0222624_12858061 112Ga0222625_16938981 113Ga0222622_103234041 114Ga0207695_114023321 115Ga0207644_113646341 116Ga0207704_102918303 117Ga0207665_109617201 118Ga0207665_110050372 119Ga0207689_104186841 120Ga0208420_10262511 121Ga0207648_100737331 122Ga0207674_102038964 123Ga0209154_13055231 124Ga0256802_10576501 125Ga0209161_102453532 126Ga0209995_10390211 127Ga0210002_10166671 128Ga0209178_10531131 129Ga0209814_103805181 130Ga0209974_102636872 131Ga0209382_118612562 132Ga0268264_111633421 133Ga0299906_104644161 134Ga0302046_102656061 135Ga0307498_104356562 136Ga0307495_100721211 137Ga0306918_113822882 138Ga0310907_105415362 139Ga0310907_107347201 140Ga0306919_115086091 141Ga0307411_108228851 142Ga0310906_112149061 143Ga0310896_104166882 144Ga0316605_116896921 145Ga0364933_214351_3_179 146Ga0364934_0210165_3_239 147Ga0364941_021920_2_220 148Ga0370545_051877_636_800
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110 1Iowa-Corn-GraphCirc_01913900 2F24TB_147600572 3JGI10216J12902_1041619321 4JGI10216J12902_1214026501 5Ga0055471_102749542 6Ga0055468_101892062 7Ga0055465_103635432 8Ga0062590_1022380731 9Ga0063356_1007365311 10Ga0063356_1044211132 11Ga0065714_104974761 12Ga0065715_105572651 13Ga0070673_1009699932 14Ga0070694_1017240931 15Ga0068853_1023369581 16Ga0066697_103149832 17Ga0105106_110878911 18Ga0105107_108477461 19Ga0126380_110844371 20Ga0134123_101721991 21Ga0075331_11750501 22Ga0180086_10310452 23Ga0180067_11539682 24Ga0187776_109096481 25Ga0184629_104240391 26Ga0190271_111641981 27Ga0193712_10402012 28Ga0193726_12250142 29Ga0364934_0210165_3_239
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1Ga0307495_100721211 2JGI10216J12902_1041619321 3Ga0055471_102749542 4Ga0055468_101892062 5Ga0055466_101704671 6Ga0055465_103635432 7Ga0063356_1007365311 8Ga0066388_1018463291 9Ga0070673_1009699932 10Ga0066697_103149832 11Ga0070696_1019924782 12Ga0075436_1008739002 13Ga0079218_120635742 14Ga0105107_104228081 15Ga0114129_109385622 16Ga0126380_110844371 17Ga0134086_100230444 18Ga0134123_101721991 19Ga0137446_10725452 20Ga0137358_103617221 21Ga0157370_102188874 22Ga0075331_11750501 23Ga0180086_10310452 24Ga0187776_109096481 25Ga0184609_101395252 26Ga0184629_104240391 27Ga0190271_111641981 28Ga0184642_10939001 29Ga0193712_10402012 30Ga0210002_10166671 31Ga0316605_116896921 32Ga0364933_214351_3_179 33Ga0364934_0210165_3_239
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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.96% β-sheet: 0.00% Coil/Unstructured: 52.04%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF14332	DUF4388	25.00
PF13522	GATase_6	0.68

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.73 %
Unclassified	root	N/A	20.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.73 %
Unclassified	root	N/A	20.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.73 %
Unclassified	root	N/A	20.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.89 %
Unclassified	root	N/A	20.27 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	66.89 %
Unclassified	root	N/A	20.27 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	66.89 %
Unclassified	root	N/A	20.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.27 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	66.89 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	66.89 %
Unclassified	root	N/A	20.27 %

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_302486_length_1623_cov_16.923597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1655	Open in IMG/M
3300000550\|F24TB_14760057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300000787\|JGI11643J11755_11412756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	755	Open in IMG/M
3300000956\|JGI10216J12902_104161932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1138	Open in IMG/M
3300000956\|JGI10216J12902_121402650	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300001431\|F14TB_107397731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300003987\|Ga0055471_10274954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300003993\|Ga0055468_10189206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300003997\|Ga0055466_10170467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300004049\|Ga0055493_10050221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.89%
Host-Associated	Host-Associated	33.11%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	17.57%
Plants	Host-Associated → Plants	33.11%
Terrestrial	Environmental → Terrestrial	49.32%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	2.03%
Freshwater	Environmental → Aquatic → Freshwater	6.76%
Marine	Environmental → Aquatic → Marine	3.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.92%
Sediment	Environmental → Aquatic → Sediment	7.43%
Soil	Environmental → Terrestrial → Soil	47.30%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.14%
Loam	Environmental → Terrestrial → Soil → Loam	8.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.41%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.05%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.35%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.05%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.38%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.03%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.70%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.35%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.38%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.35%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.70%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M

Showing 1 to 10 of 135 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01913900	2140918013	Soil	MPQETASMEGSKVIRPVNLNWQRGGLRWKISTTFSGLILVLGLLVIGIVYYFTANA
F24TB_147600572	3300000550	Soil	MPQETASMESSKLVXXXXXXXXXGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLADAAAGLVSRKS
JGI11643J11755_114127562	3300000787	Soil	MPQETASMEGSKVIRPVNLNWQRGGLRWKISTTFSGLILVLGLLVIGIVYYFTANALQKQVDLRSSAI
JGI10216J12902_1041619321	3300000956	Soil	MAQDSVSIEGSKFVKPAADGWRKGGLKWKISSTFSGLIFVLGLLVIGIVYVFTGNALQKQVDLRSAAIATNLAD
JGI10216J12902_1214026501	3300000956	Soil	MPQESMSIEGSKIAKPMALGSQGGSLKWKITASFSGLILLLGVLVIAIVYYFTSNALQKQVDLRSVAIATNLSDASAGYVSRKSSL
F14TB_1073977312	3300001431	Soil	MPQETASMESSKLVKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLAD
Ga0055471_102749542	3300003987	Natural And Restored Wetlands	MAEDSVSMEHGKIAKPANIAWQRGGLRWKISAAFAGLILALGVLVIGIVYFFTSHALQKQVDLR
Ga0055468_101892062	3300003993	Natural And Restored Wetlands	MSQETASIENTKVAKPINMNWQRGGLRWKISTSFSGLVLILGLLVIAIVYYFTSSALQKQVDLRSSAIATNLADAAAG
Ga0055466_101704671	3300003997	Natural And Restored Wetlands	MPQESISMETAKIAKPLNLTWQRGGLRWKISTAFSGLILVLGLLVIGIVYFFTNNALQKQVDL
Ga0055465_103635432	3300004013	Natural And Restored Wetlands	MAQESVSMESSKIAKPMNLTWQRGGLRWKISTAFGGLILGLGVLVIGIVYFFTN
Ga0055493_100502212	3300004049	Natural And Restored Wetlands	MAQDTVTIEGSKFAKPAADGWRKGGLKWKISSTFSGLIFVLGLLVIGIVYFFTGNALQKQVDLRAAAIAA
Ga0062590_1022380731	3300004157	Soil	MAQNTVTAESSKFAKPEAAHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTNNALEKQVELRSTAIATNLADASAGFV
Ga0063356_1007365311	3300004463	Arabidopsis Thaliana Rhizosphere	MPQETASMEGSKVIRPVNLNWQRGGLRWKISTTFSGLILVLGLLVIGIVYYFTANALQKQVDLRSSAIATNLSDAAAGLVSRKSTLELDALVAKYGRL
Ga0063356_1044211132	3300004463	Arabidopsis Thaliana Rhizosphere	MAQNTVTAESSKFAKPEAAHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFT
Ga0065717_10084742	3300005276	Arabidopsis Rhizosphere	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLADAA
Ga0065714_104974761	3300005288	Miscanthus Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNL
Ga0065715_105572651	3300005293	Miscanthus Rhizosphere	MAQESASIEGSKFAKPVNNIVNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHFTGSALQKQVDLRSA
Ga0065705_103245481	3300005294	Switchgrass Rhizosphere	MPQEIASMESSKFIKQLHIGWQRGGLKWKISTTFSGLILVLGLLVIGIVYYFTD
Ga0065707_102633472	3300005295	Switchgrass Rhizosphere	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLAD
Ga0070683_1012320562	3300005329	Corn Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQK
Ga0066388_1018463291	3300005332	Tropical Forest Soil	MAQETASVESSKFAKPVHIEWKRGGLRWKISTTFTGLILGLGVLVIGIVYYFTSNALQKQVDLRAAAIATNLADAGA
Ga0070660_1013571012	3300005339	Corn Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIATNLADA
Ga0070692_104053571	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAG
Ga0070675_1012515131	3300005354	Miscanthus Rhizosphere	MAQESASIEGSKFAKPVNNIVNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHFTGSALQKQVDLRSAAIATNLADAAAGLVSKK
Ga0070673_1009699932	3300005364	Switchgrass Rhizosphere	MAQESASIEGSKFAKPVNNIVNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHFTGSALQKQVDLRSAAIATNLADAAASLVSKKNTLELDAM
Ga0070673_1014281371	3300005364	Switchgrass Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGAGLVSRKGILELDA
Ga0070667_1003069151	3300005367	Switchgrass Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRA
Ga0070667_1023318631	3300005367	Switchgrass Rhizosphere	MAQNTATAESSKFAKPEAAHWQRGGLKWKISATFSGLILVLGLLVIGIVYFFTNNALEKQVEL
Ga0070703_102556402	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAQESASIEGSKFAKPVNNIVNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHFTGSALQKQVDLRSAAIATNLADAAASL
Ga0070700_1008869011	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLA
Ga0070694_1017240931	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVD
Ga0066681_100207215	3300005451	Soil	MPQESMSIEGSKIAKPIALGSQGGSLKWKITASFSGLILLLGVLVIAIVYYFTSNALQKQVDLRSVAI
Ga0068853_1023369581	3300005539	Corn Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTS
Ga0066697_103149832	3300005540	Soil	MPQEIASMESSKFFKQLNIGWQRGGLKWKISTTFSGLILVLGLLVIGIVYYFTYNALQRQVDLRSTALAS
Ga0070686_1007770651	3300005544	Switchgrass Rhizosphere	MAQESASLEGSKFAKPVNNIVNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHFTGSALQKQVDLRSAAIATNLADAAASLVSKKNTLELDAMI
Ga0070696_1019924782	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPQETASVESSKVAKPINIDWQRGGLRWKISTTFGGLILVLGLLVIGIVYYFTSEALQKQVDLRSSAIATNLADASAGLVSR
Ga0070704_1011648121	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAQNTATAESSKFAKPEAPHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTNSALEKQVELRSTAIATNL
Ga0068857_1007867671	3300005577	Corn Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIATNLADAGAGL
Ga0068863_1012637072	3300005841	Switchgrass Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQ
Ga0068858_1013158341	3300005842	Switchgrass Rhizosphere	MAQETASLNSSKLARPVAIDWKRGGLRWKISDTFTCLILGLGVLVIGIVYYFTSSALQKQVD
Ga0068860_1006109102	3300005843	Switchgrass Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGA
Ga0066653_100107335	3300006791	Soil	MPQESMSIEGSKIAKPIALGSQGGSLKWKITASFSGLILLLGVLVIAIVYYFTSNALQKQVDLRSVAIATNLSDASAGYVSR
Ga0075428_1002858644	3300006844	Populus Rhizosphere	MPQETASMESSKLVKAVHIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQ
Ga0075433_109232551	3300006852	Populus Rhizosphere	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAI
Ga0075434_1017307602	3300006871	Populus Rhizosphere	MPQETASMESSKLVKAVHIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRS
Ga0075436_1008739002	3300006914	Populus Rhizosphere	MAQETASLDNSKLAKSFAIDWKRGGLRWKIGVTFTSLILGLGVLVIGIVYHFTSSALQKQVDLRAEAIATNLADAGAGLVSRKGT
Ga0079219_101782331	3300006954	Agricultural Soil	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRSQAIATNLADAGAGLVSRKG
Ga0079218_120635742	3300007004	Agricultural Soil	MAQDTASLESSKVLRPIAINWQRNGLRWKISTTFSGLILILGALVISIVYYFTASA
Ga0105106_110878911	3300009078	Freshwater Sediment	MAQDTVTIEGSKFAKPAEERWRRGGLKWKISSTFSGLIFVLGLLVIGIVYFFTGNALQKQ
Ga0105107_104228081	3300009087	Freshwater Sediment	MPQDTVSIESSKFAKPAAEGWRKRGLKWKITMTFSGLIFVLGLLVIGIVYHFAGNALQKQAD
Ga0105107_108477461	3300009087	Freshwater Sediment	MDSSKLVKPVNINWQRGGLKWKISVTFSGLILVLGLIVIGIVYHFTGSALQRQVDLRSAAIATNLADATAG
Ga0105250_104520622	3300009092	Switchgrass Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLR
Ga0105240_105615241	3300009093	Corn Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGAGLASRKGI
Ga0111539_101157634	3300009094	Populus Rhizosphere	MESSKLVKAVHIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQ
Ga0075418_111978012	3300009100	Populus Rhizosphere	MAQNTATAESSKFVKPEAARWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTNNALEKQVELRATA
Ga0105247_105731722	3300009101	Switchgrass Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDL
Ga0114129_103009041	3300009147	Populus Rhizosphere	MPQETASMESSKYLKPVNIGWQRGGLKWKISATFSGLIFVLGLLVIGIVYYF
Ga0114129_109385622	3300009147	Populus Rhizosphere	MAQNTATAESSKYVKPEPSHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTNNALEKQVELRSTAIATNLADASAGFVSRK
Ga0075423_109518131	3300009162	Populus Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGAGLVSRK
Ga0105100_102523351	3300009166	Freshwater Sediment	MSQETVSMDSSKLVKPVNINWQRGGLKWKISVTFSGLILVLGLIVIGIVYHFTGSALQRQVDRRSAAIATNLADATAGMVSRKSTLELDA
Ga0113563_132530541	3300009167	Freshwater Wetlands	MAQDTVTIEGSKFAKPAADGWRKGGLKWKISSTFSGLIFVLGLLVIGIVYFFTG
Ga0105241_110337962	3300009174	Corn Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIATNLADAGAGLVSRKGILE
Ga0126314_114550862	3300010042	Serpentine Soil	MAQDSVSIEGSKFVKPAADGWRKGGLKWKISSTFSGLIFVLGLLVIAIVYVFTGNALQKQVDLRSAAIATNLADASAGFVSRKST
Ga0126380_110844371	3300010043	Tropical Forest Soil	MPQNTMTMENSKFAKPSVIAGLRGGLKWKIISSFSGLILVLGVLVIGIAYYFTNAALQKQIDLRATAIAANLADAAAGLVSRKSTLE
Ga0134086_100230444	3300010323	Grasslands Soil	MPQESMSIEGSKIAKPIALGSQGGSLKWKITASFSGLILLLGVLVIAIVYYFTSNALQKQVDLRSVAIATNLSDAFAGYVSRKSSFEL
Ga0134065_100115091	3300010326	Grasslands Soil	MPQESMSIEGSKIAKPIALGSQGGSLKWKITASFSGLILLLGVLVIAIVYYFTSNALQKQVDLRSVAIATNLSDASAGYV*
Ga0134127_125020742	3300010399	Terrestrial Soil	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIA
Ga0134127_129917371	3300010399	Terrestrial Soil	MESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTA
Ga0134122_103210513	3300010400	Terrestrial Soil	MAQDSVSIEGSKFAKPAAEGWRRGGLRWKISATFSGLIFVLGLLVIGIVYVFTGNALQKQVDLRSAAIATNLADASAGFVSRKSTLEL
Ga0134121_107460002	3300010401	Terrestrial Soil	MESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLADAAAGLVSRKSTLE
Ga0134123_101721991	3300010403	Terrestrial Soil	MEGSKIAKPISINWQRGGLRWKISVTFSGLMLALGLLVIGIVYYFTGAALQKQVDLRASAIATNLSDA
Ga0134123_115413072	3300010403	Terrestrial Soil	MAQESASIEGSKFAKPVNNIVNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHFTGSALQKQVDLRSAAIA
Ga0137446_10725452	3300011419	Soil	MAQDSVTVENSKFAKPVSINWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTN
Ga0137427_104060521	3300011445	Soil	MAQNTATAESSKFVKPEAAHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTNNALEKQVELRATAIA
Ga0137459_10438553	3300012228	Soil	MAQNTATAESSKFAKPEAAHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTNNALEKQ
Ga0137361_111647321	3300012362	Vadose Zone Soil	MPQETASVESSKVDKPINIDWQRGGLRWKISTTFGGLILVLGLLVIGIVYYFTSEALQKQVDLRSSAIA
Ga0157348_10184152	3300012479	Unplanted Soil	MTQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFT
Ga0137358_103617221	3300012582	Vadose Zone Soil	MESSKLAKPVNIDWKRGGLRWKISTTFSGLILVLGLLVIGIVYYFTSSSLQRQ
Ga0137395_111037172	3300012917	Vadose Zone Soil	MESSKLAKAVNIDWQRGGLRWKISATFSGLILALGLLVIGIVYYFTSTALQKQVDLRSAAIATNL
Ga0137410_112198282	3300012944	Vadose Zone Soil	MPQETASVESSKLAKAASIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTNTALQKQVDLRSAAIATNLADAAAGLVSRKSTLELD
Ga0164305_121364432	3300012989	Soil	MESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTS
Ga0157370_102188874	3300013104	Corn Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGAGLVSRKGILEL
Ga0157375_111544281	3300013308	Miscanthus Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIATNLADAGAGLVSRK
Ga0157375_130497992	3300013308	Miscanthus Rhizosphere	MAQESASIEGSKFAKPVNNIVNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHF
Ga0075325_11639041	3300014270	Natural And Restored Wetlands	MAEDSVSMEHGKIAKPANIAWQRGGLRWKISAAFAGLILALGVLVIGIVYFFTSHALQKQVDL
Ga0075310_11090962	3300014302	Natural And Restored Wetlands	MSQETASIENTKVAKPINMNWQRGGLRWKISTSFSGLVLILGLLVIAIVYYFTSSALEKQVDLRSSA
Ga0075331_11750501	3300014310	Natural And Restored Wetlands	MPQESVSVENSKIVKPINIHLQRGGLSWKISTTFSGLILILGILVIGIVYYFTVDALQKQVDLRSSALATNL
Ga0180087_10658231	3300014872	Soil	MAQETVSIEASKFAKPAEERWRKGGLKWKISSTFSGLIFVLGLLVIGIVYF
Ga0180084_11086821	3300014874	Soil	MPQDTVSIESSKFAKPAVEGWRKRGLKWKITMNFSGLIFVLGLLVIGIVYHFAGNALQKQ
Ga0180086_10310452	3300014883	Soil	MSQETASMDSSKLVKPVNINWQRGGLKWKISVTFSSLILVLGLMVIGIVYHFTGNALQRQVDLRSEAIATNLADATAGIVSRKSTLELDALIASERRSTCLCKALPVK*
Ga0180067_11539682	3300015257	Soil	MPQDTVSIESSKFAKTATEGWHKHGLKWKITSTFSGLIFALGLLVIGIVYYF
Ga0182007_101573272	3300015262	Rhizosphere	MAQEIASLENSKLAKAFAVDWKRGGLRWKISVTFTSLILALGVLVIGIVYHFTSSALQKQVDLRA
Ga0132255_1018010891	3300015374	Arabidopsis Rhizosphere	MAQETASLESSKLAKAVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIATN
Ga0132255_1018982741	3300015374	Arabidopsis Rhizosphere	MAQETASLESSKLPKPVAIDWKRGGLRWKISITFTGLILGLGTLVIGIVYYFTSSALQKQVDLRAEAIATNLAD
Ga0132255_1037524481	3300015374	Arabidopsis Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGAGL
Ga0190266_112620412	3300017965	Soil	MPQDTVSIESSKFAKPAAEGWRKHGLKWKITSAFSGLIFVLGLLVIGIVYHFAGNAL
Ga0187776_109096481	3300017966	Tropical Peatland	MPQESVSIEASKISKPVSLPWKGGGLKWKITACFSGLILLLGVLVIGIVYYFTSDALQKEVDSRSTAIATNLSDASAGY
Ga0184608_101458861	3300018028	Groundwater Sediment	MAQNTATAESSKFAKPETAHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTNNAL
Ga0184609_101395252	3300018076	Groundwater Sediment	MPQETASVDSSKFVKPVNINWQRGGLKWKISTTFSGLILVLGLLVIGIVYYFTGSALQKQIDLRSAAI
Ga0184629_104240391	3300018084	Groundwater Sediment	MSQQSATVESSKFVKTETSKPFRGGLKWKITCTFSGLILLLGLLVITIVYFFTNNALQKQVDLRAAAIASNLADAAAGLVSRKSTLELD
Ga0190272_110663881	3300018429	Soil	MPQDTVSIESSKFVKPAAEGWHKHGLKWKITSTFSGLIFVLGFLVIGIVYHFAGNA
Ga0190270_125808922	3300018469	Soil	MPQDTVSIESSKFAKTATEGWHKHGLKWKITSTFSGLIFALGLLVIGIVYYFAGNALQKQ
Ga0190271_111641981	3300018481	Soil	MPQDTVSIESSKFAKTATEGWHKHGLKWKITSTFSGLIFALGLLVIGIVYYFAGNALQKQAELRSGAIATNLADASAGFVSRRST
Ga0180115_12019612	3300019257	Groundwater Sediment	MSQETASMDSSKLVKPVNINWQRGGLKWKISVTFSGLILVLGLMVIGIVYHFTGSALQRQVDLRSEAIATNLADATAGMVSRKSTL
Ga0184642_10939001	3300019279	Groundwater Sediment	MPQETASIESSKYVKQVSIGWQRGGLKWKISTTFGGLILVLGLLVIGIVYYFTGNALQRQVDLRSTALATNLADGAAGFVS
Ga0193712_10402012	3300019880	Soil	MSEDTATMENSKFVKPAAVTWQRGGLKWKISTAFSGLILVLGVLVIGIVYFFANNA
Ga0193707_10899422	3300019881	Soil	MAQESASIEGSKFAKPVNNVFNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHFTGSALQKQVDLRSAAIATNLADAAAGLVSK
Ga0193727_11088032	3300019886	Soil	MPQETASMESSKLAKAVHIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLADAA
Ga0193726_12250142	3300020021	Soil	MSQESVSIEGSKFAKPVNNVFNWQRGGLRWKISVTFGGLILVLGLMVIGIVYHF
Ga0193709_10926941	3300021411	Soil	MPQETASMESSKLAKAVHIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQK
Ga0222624_12858061	3300021951	Groundwater Sediment	MPQETASIESSKYVKQVSIGWQRGGLKWKISTTFSGLILVLGLLVIGIVYYFTGNALQRQVDLRSTAL
Ga0222625_16938981	3300022195	Groundwater Sediment	MPQETASIESSKYVKQVSIGWQRGGLKWKISMTFSGLILVLGLLVIGIVYYFT
Ga0222622_103234041	3300022756	Groundwater Sediment	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQK
Ga0207695_114023321	3300025913	Corn Rhizosphere	MAQETASLNSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSAL
Ga0207644_113646341	3300025931	Switchgrass Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGAGLAS
Ga0207704_102918303	3300025938	Miscanthus Rhizosphere	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLR
Ga0207665_109617201	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPQETASVESSKVAKPINIDWQRGGLRWKISTTFGGLILVLGLLVIGIVYYFTSEALQKQVDLRSS
Ga0207665_110050372	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIATNLADAGA
Ga0207689_104186841	3300025942	Miscanthus Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLAD
Ga0208420_10262511	3300026028	Natural And Restored Wetlands	MPQESVSVENSKIVKPINIHLQRGGLSWKISTTFSGLILILGILVIGIVYYFTVDALQKQVDLRSSALATCESTPPTAV
Ga0207648_100737331	3300026089	Miscanthus Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVD
Ga0207674_102038964	3300026116	Corn Rhizosphere	MAQETASLESSKLAKPVAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAEAIATNLADAGAGLV
Ga0209154_13055231	3300026317	Soil	MPQESMSIEGSKIAKPMALGSQGGSLKWKITASFSGLILLLGVLVIAIVYYFTSNALQKQVDLRSVAIATNLS
Ga0256802_10576501	3300026492	Sediment	MAQDSISIEGSKFAKPVAEGWRKGGLKWKISSTFSGLVFVLGLLVIGIVYFFTGNALQKQVDLRSAAIATNLADASAGFVSR
Ga0209161_102453532	3300026548	Soil	MPQESMSIEGSKIAKPMALGSQGGSLKWKITASFSGLILLLGVLVIAIVYYFTSNALQKQVDLRSVAIATNLSDASAGYVSRKSSLELD
Ga0209995_10390211	3300027471	Arabidopsis Thaliana Rhizosphere	MSQETASLENTKLAKPMNMNWQRGGLRWKISTTFSGLVLILGLLVIAIVYYFTSNA
Ga0210002_10166671	3300027617	Arabidopsis Thaliana Rhizosphere	MPQETASMENTKLAKPITMNWQRGGLRWKISTTFSGLIFVLGVFVIAIVYYFTSNALQKQVDLRSSAIATNLADAAAGLVARKS
Ga0209178_10531131	3300027725	Agricultural Soil	MAQETASLESSKLAKPAAIDWKRGGLRWKISITFTGLILGLGVLVIGIVYYFTSS
Ga0209814_103805181	3300027873	Populus Rhizosphere	MPQETASMESSKYLKPVNIGWQRGGLKWKISTTFSGLILVLGLLVIGIVYY
Ga0209974_102636872	3300027876	Arabidopsis Thaliana Rhizosphere	MPQETASMENTKLAKPITMNWQRGGLRWKISTTFSGLIFVLGVFVIAIVYYFTSNALQKQVDLRSSAIATNL
Ga0209382_118612562	3300027909	Populus Rhizosphere	MAQNTATAESSKYVKPEPSHWQRGGLKWKISSTFSGLILVLGLLVIGIVYYFTHNA
Ga0268264_111633421	3300028381	Switchgrass Rhizosphere	MAQETASLDSSKLARPVAIDWKRGGLRWKISVTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAQAIATNLADAGAG
Ga0299906_104644161	3300030606	Soil	MPQETVSVENSKFVKPINIHLQRGGLSWKISTTFSGLILILGVFVIGIVYYFTVNALQKQVD
Ga0302046_102656061	3300030620	Soil	MPQETVSVENSKFVKPINIHLQRGGLSWKISTTFSGLILILGVLVIGIVYYFTVNALQKQVDLRSSALASNLADAAAGLVSRKST
Ga0307498_104356562	3300031170	Soil	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAA
Ga0307495_100721211	3300031199	Soil	MPQETASMESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIAT
Ga0306918_113822882	3300031744	Soil	MAQETASVESSKFAKPVHIEWKRGGLRWKISTTFTGLILGLGVLVIGIVYYFTSSALQKQVDLRAAAIATNLADAGAGLV
Ga0310907_105415362	3300031847	Soil	MPQETASMESSKLVKAVHIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLADAAAGLV
Ga0310907_107347201	3300031847	Soil	MAQNTATAESSKFAKPEAAHWQRGGLKWKISATFSGLILVLGLLVIGIVYFFTNNALEKQVELRSTAIATNLADASAGFVSRKSTLE
Ga0306919_115086091	3300031879	Soil	MAQETASVESSKFAKPVHIEWKRGGLRWKISTTFTGLILGLGVLVIGIVYYFT
Ga0307411_108228851	3300032005	Rhizosphere	MAQDSVSIEGSKFVKPAADGWRKGGLKWKISSTFSGLIFVLGLLVIGIVYVFTGNALQKQVDLRSAAIATNLADASAGFVSRKSTLELDAL
Ga0310906_112149061	3300032013	Soil	MPQETASMESSKLVKAVHIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLADAAAGLVSRK
Ga0310896_104166882	3300032211	Soil	MAQDSVSIEGSKFVKPAADGWRKGGLKWKISSTFSGLIFVLGLLVIGIVY
Ga0316605_116896921	3300033408	Soil	MAQETVSIEASKFAKPAEERWRKGGLKWKISSTFSGLIFVLGLLVIGIVYFFTGNALQKHVDLRAAA
Ga0364933_214351_3_179	3300034150	Sediment	MAQNTATAESSKFAKPEAAHWQRGGLKWKISATFSGLILVLGLLVIGIVYFFTNNALEK
Ga0364934_0210165_3_239	3300034178	Sediment	MSQQSAAVESSKFVKAKTAKPPRGGLRWKITYTFSGLILLLGLLVIGIVYHFTHDALQKQVDLRAAAIATNLADAATGL
Ga0364941_021920_2_220	3300034417	Sediment	MESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVDLRSAAIATNLADAAAGLV
Ga0370545_051877_636_800	3300034643	Soil	MESSKLAKAVNIDWQRGGLRWKISATFSGLILVLGLLVIGIVYYFTSTALQKQVD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048650

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences