Metagenome / Metatranscriptome Family F048591

Basic Information
Family ID	F048591
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	59 residues
Representative Sequence	MDPAVAALDFAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAPSLHLHS
Number of Associated Samples	137
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.22 %
% of genes near scaffold ends (potentially truncated)	99.32 %
% of genes from short scaffolds (< 2000 bps)	98.65 %
Associated GOLD sequencing projects	134
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.973 % of family members)
Environment Ontology (ENVO)	Unclassified (31.081 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.378 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1AF_2010_repII_A01DRAFT_10288674 2JGI12192J12874_1007243 3JGI12032J12867_10062913 4JGI12660J13575_1015683 5JGI12635J15846_103684081 6JGI12627J18819_104179262 7JGI25614J43888_102007371 8JGI25617J43924_101405951 9JGIcombinedJ51221_102217361 10Ga0062387_1004292871 11Ga0062387_1015173332 12Ga0062589_1023680861 13Ga0066395_103956161 14Ga0066869_101091172 15Ga0066674_101396834 16Ga0066388_1007652861 17Ga0070707_1010263411 18Ga0070762_105213121 19Ga0070763_107148801 20Ga0075026_1000929423 21Ga0075015_1009825262 22Ga0070715_109703921 23Ga0075014_1006110221 24Ga0074057_112001631 25Ga0075428_1008073301 26Ga0066797_12216163 27Ga0099830_106857551 28Ga0099828_110400743 29Ga0099827_108666863 30Ga0116221_11436294 31Ga0116105_11620171 32Ga0126374_101769313 33Ga0126380_122140002 34Ga0074044_104199053 35Ga0126370_105064453 36Ga0126370_117113572 37Ga0126370_122374312 38Ga0126372_107017461 39Ga0126377_108355511 40Ga0126377_109335981 41Ga0136643_106537011 42Ga0126381_1031560162 43Ga0126381_1036720152 44Ga0126383_101463304 45Ga0126383_107163691 46Ga0126383_115467593 47Ga0124850_10439051 48Ga0151489_10464182 49Ga0137391_105597081 50Ga0137393_108032311 51Ga0120191_101836091 52Ga0153934_10702981 53Ga0137343_10312913 54Ga0137363_105963473 55Ga0137376_115082872 56Ga0137378_118653482 57Ga0137360_107285863 58Ga0137361_109633093 59Ga0157320_10309091 60Ga0137410_105247661 61Ga0126375_118118692 62Ga0157358_10821212 63Ga0157377_111646432 64Ga0180084_10414221 65Ga0180104_10579191 66Ga0137405_12355301 67Ga0132258_128074691 68Ga0182033_107105823 69Ga0182032_107593111 70Ga0182040_101542464 71Ga0187820_13062452 72Ga0187819_104008391 73Ga0187782_107189213 74Ga0187823_100310651 75Ga0187822_101565951 76Ga0187805_100521915 77Ga0187805_103866821 78Ga0187766_109037572 79Ga0187772_110194331 80Ga0187768_10434931 81Ga0210399_112764471 82Ga0210404_105446411 83Ga0210405_105989511 84Ga0210408_102185901 85Ga0213879_100756151 86Ga0126371_115194511 87Ga0247695_10224801 88Ga0207663_100975891 89Ga0207644_116543771 90Ga0257176_10503871 91Ga0257146_10638401 92Ga0257147_10535162 93Ga0257156_11334991 94Ga0257161_10085004 95Ga0207786_1070661 96Ga0207785_10043854 97Ga0207766_10327321 98Ga0207762_10251491 99Ga0208603_10483031 100Ga0208890_10203601 101Ga0209527_10039561 102Ga0208044_11725891 103Ga0209625_10108924 104Ga0209118_10392013 105Ga0209655_102512031 106Ga0209889_10420954 107Ga0307503_102214551 108Ga0222748_11167321 109Ga0310039_100468161 110Ga0075374_114661051 111Ga0075373_113442981 112Ga0075376_110301881 113Ga0307496_101413542 114Ga0170824_1194874021 115Ga0265327_102488613 116Ga0311364_121469691 117Ga0318516_102980773 118Ga0318560_103814062 119Ga0307476_103377151 120Ga0307476_104373384 121Ga0306917_105246871 122Ga0318493_105335182 123Ga0318500_102361383 124Ga0306918_115034792 125Ga0318543_102437011 126Ga0318508_10667741 127Ga0318547_103280511 128Ga0318552_103081693 129Ga0318567_107125511 130Ga0318564_105422981 131Ga0318495_101913323 132Ga0306919_104717881 133Ga0306919_108789601 134Ga0318544_103258701 135Ga0306925_107904541 136Ga0318522_101873613 137Ga0306921_104461621 138Ga0306921_111511713 139Ga0310912_101805761 140Ga0310916_114844141 141Ga0310910_106357741 142Ga0310909_102904091 143Ga0318513_103579561 144Ga0335077_108433301 145Ga0310914_106994021 146Ga0318519_103227261 147Ga0370502_0074251_862_1074 148Ga0364923_0142395_2_193
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80 1AF_2010_repII_A01DRAFT_10288674 2JGI12192J12874_1007243 3JGI12660J13575_1015683 4JGI12627J18819_104179262 5Ga0062387_1015173332 6Ga0066869_101091172 7Ga0066388_1007652861 8Ga0099828_110400743 9Ga0126380_122140002 10Ga0126370_122374312 11Ga0157377_111646432 12Ga0209527_10039561 13Ga0209889_10420954 14Ga0265327_102488613 15Ga0311364_121469691 16Ga0318543_102437011 17Ga0364923_0142395_2_193
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58 1Ga0120191_101836091 2Ga0062387_1004292871 3Ga0062387_1015173332 4Ga0066869_101091172 5Ga0066674_101396834 6Ga0066388_1007652861 7Ga0070715_109703921 8Ga0099827_108666863 9Ga0126374_101769313 10Ga0157377_111646432 11Ga0182040_101542464 12Ga0187782_107189213 13Ga0187822_101565951 14Ga0210405_105989511 15Ga0209527_10039561 16Ga0209889_10420954 17Ga0075374_114661051 18Ga0307496_101413542 19Ga0265327_102488613 20Ga0311364_121469691 21Ga0310912_101805761 22Ga0370502_0074251_862_1074 23Ga0364923_0142395_2_193
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.91% β-sheet: 0.00% Coil/Unstructured: 72.09%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00078	RVT_1	11.49
PF08281	Sigma70_r4_2	0.68
PF08388	GIIM	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.03 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	51.35 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	20.95 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	8.11 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	20.95 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	8.11 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.68 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	0.68 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	8.11 %
Unclassified	root	N/A	0.00 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	14.86 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.68 %
Bradyrhizobium sp. CCGUVB23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	14.86 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	0.68 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	8.11 %
Unclassified	root	N/A	0.00 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1028867	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300000901\|JGI12192J12874_100724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	867	Open in IMG/M
3300000912\|JGI12032J12867_1006291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	699	Open in IMG/M
3300001179\|JGI12660J13575_101568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	694	Open in IMG/M
3300001593\|JGI12635J15846_10368408	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300001867\|JGI12627J18819_10417926	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300002906\|JGI25614J43888_10200737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB23	540	Open in IMG/M
3300002914\|JGI25617J43924_10140595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	837	Open in IMG/M
3300003505\|JGIcombinedJ51221_10221736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	767	Open in IMG/M
3300004091\|Ga0062387_100429287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	900	Open in IMG/M

Showing 1 to 10 of 148 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.92%
Host-Associated	Host-Associated	6.08%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	10.81%
Arthropoda	Host-Associated → Arthropoda	0.68%
Fungi	Host-Associated → Fungi	1.35%
Plants	Host-Associated → Plants	4.05%
Terrestrial	Environmental → Terrestrial	83.11%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	0.68%
Floodplain	Environmental → Terrestrial → Floodplain	0.68%
Freshwater	Environmental → Aquatic → Freshwater	6.76%
Mycelium	Host-Associated → Fungi → Mycelium	1.35%
Peat	Environmental → Terrestrial → Peat	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.70%
Sediment	Environmental → Aquatic → Sediment	4.05%
Soil	Environmental → Terrestrial → Soil	81.76%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.68%
Loam	Environmental → Terrestrial → Soil → Loam	14.86%
Sand	Environmental → Terrestrial → Soil → Sand	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.35%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.41%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.35%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.68%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.68%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.03%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.03%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.05%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.35%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.68%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.70%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.03%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000901	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2	Environmental	Open in IMG/M
3300000912	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3	Environmental	Open in IMG/M
3300001179	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M

Showing 1 to 10 of 137 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10288674	3300000580	Forest Soil	MDLAVAALDLTKAGAIIANMIESYLAGGAPLPNTQGADHDEFEDGRSPSGAAS
JGI12192J12874_1007243	3300000901	Forest Soil	MDPAVAGLDFAKAGIVLANMIESYLAGGAPPSNPEGAVHDKPQDCRSTSVTAS
JGI12032J12867_10062913	3300000912	Forest Soil	MDPAVAGLDFAKAGIVLANMIESYLAGGAPPSNPEGAVHDKPQDCRSTSV
JGI12660J13575_1015683	3300001179	Forest Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAASLHLHSSIDAGA
JGI12635J15846_103684081	3300001593	Forest Soil	MDPAVAALDFAKAGAILADMIESYLAGGAPPSSNPEGADYDDVEDCRSTSVAPSLHLH
JGI12627J18819_104179262	3300001867	Forest Soil	MDPAVATLDFAKAGAIIANMIESYLAAGALPFNAEGADHAEPEDCRSSSDAKSLHL
JGI25614J43888_102007371	3300002906	Grasslands Soil	MDPAVAGLDFAKAGIVLANMIESYLAGGAPPSNPEGAVHDKPQDCRSTSVTASLRLRSA
JGI25617J43924_101405951	3300002914	Grasslands Soil	MDPAVAALDIAKAGVILANMIESYLAGGAPPSNPEGAEHDDLQDRRSTSVAGSLHLHSSIDDGA
JGIcombinedJ51221_102217361	3300003505	Forest Soil	MDPAVAALDLAKAGAIIADMIESYLAGGAPSSNPEGADHDDLQDCRSTSVAASLHLHSSIDAGA
Ga0062387_1004292871	3300004091	Bog Forest Soil	MDPTVAGLDVAKAGVIIANMIESYLAGGALPSNPEGAAHDDLQDCRSTSVAGG
Ga0062387_1015173332	3300004091	Bog Forest Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGALPPNPEGADHVEHQDCRSSSGAARLHLHSAVDTGASALQSREHRAPV
Ga0062589_1023680861	3300004156	Soil	MDPAVAALDFAKAGAIIANMIESYLAAGATPLNAEGAEHAEREDCRSSFGTASLH
Ga0066395_103956161	3300004633	Tropical Forest Soil	MDPAVAALDFAKAGAIIANMIEAYLAAGATPLNAGADHAECEDCRSSSSAPSLHLHSPVDDG
Ga0066869_101091172	3300005165	Soil	MDPAVTGLDVAKAGVILANMIEAYLAGGTPPSNPEGAAHDDLQDCRST
Ga0066674_101396834	3300005166	Soil	MDPAVANLDFAAAGAILANMIEAYLAGGALPSNAEGADHDDLEDCRSPSVAPSLHLHS
Ga0066388_1007652861	3300005332	Tropical Forest Soil	MDPAIAALDFVKAGAIIANMIESYLAAGAPPLNAEGADHAESEDCRSSSDPTSLHLHSSVDAGASALQSGEHGAPVK
Ga0070707_1010263411	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDPAVTGLDVAKAGVILANMIEAYLAGGAPPSNPEGAAHDDLQDCRSTSVAG
Ga0070762_105213121	3300005602	Soil	MDPAVTGLDVAKAGVILANMIEAYLAGGAPPSNPEGAAHDDLQDCRST
Ga0070763_107148801	3300005610	Soil	MDPAVAALDIAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAP
Ga0075026_1000929423	3300006057	Watersheds	MDPAVAALDIAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTS
Ga0075015_1009825262	3300006102	Watersheds	MDPAVAALDFAKAGAIIANMIESYLAAGATPLNAEGAEHAECEDCRSSSGTASLHLHS
Ga0070715_109703921	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDPAVAGLDFAKAGIVLANMIESYLAGGAPPSNPEGAVHDKHQDCRSASVTASLRLRSCQ
Ga0075014_1006110221	3300006174	Watersheds	MDPAVAALDIVKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAP
Ga0074057_112001631	3300006605	Soil	MDPAVAALDFAKAGAIIANMIESYLAAGATPLNAEGAEHAEREDCRSSFGTASLHLHS
Ga0075428_1008073301	3300006844	Populus Rhizosphere	MDPAVAALDFAKAGAIIANMIESYLAAGAPPFNAEGADHAEPEDCRSSSDTKRLHLHSSVDDGASA
Ga0066797_12216163	3300006864	Soil	MDPAVTTLDLAKAGAIIADMIESYLAGGAPPSNPEGDDHDDLQDCRSTSVAGSLHL
Ga0099830_106857551	3300009088	Vadose Zone Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTS
Ga0099828_110400743	3300009089	Vadose Zone Soil	MDPAVAALDIAKAGVILANMIESYLAGGAPPSNPEGAEHDDLQDRRSTSVAGSLHLHSSIDDGVGPLQPGEHRA
Ga0099827_108666863	3300009090	Vadose Zone Soil	MDPAVAALDIAKAGVILANMIESYLAGGAPPSNPEGAEHDDLQDRRSTSIAGSLHLHSSIDDGAGPLQPG
Ga0116221_11436294	3300009523	Peatlands Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGGDHDDLQDCRSTSVAASLHLHSSIDAGASPLQSGE
Ga0116105_11620171	3300009624	Peatland	MDPAVAGLDFAKAGIVLANMIESYLAGGAPPSNPVGAVHDKPQDCRSTSFT
Ga0126374_101769313	3300009792	Tropical Forest Soil	MDPAIATLDFAEAGAIIANMIEAYLAAGATPFNAEGADHAESEDCRSSSDAKRLHLHSSVDDG
Ga0126380_122140002	3300010043	Tropical Forest Soil	MDPAVAALDITKAGVILANMIESYLAGGAPPVNPEGAEHDDLQDRRSTSVAGSLHLQSTM
Ga0074044_104199053	3300010343	Bog Forest Soil	MDPAVAALDIAKAGVILANMIESYLAGGASPSNPEGAEHDDLQDRRSTSVAG
Ga0126370_105064453	3300010358	Tropical Forest Soil	MDPAVAALDFAKAGAIIANMIESYLAADALPFNAEGADHAEPEDCRSSSDAKSLHLHSSVDDGASAIQSGEHRAP
Ga0126370_117113572	3300010358	Tropical Forest Soil	MDPAIAALDFAKAGAIVANMIESYLAAGAPPLNAEGADHAESKDCRSSSGSTSLHLHSPIDACASALQPG
Ga0126370_122374312	3300010358	Tropical Forest Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLHLHSPIDAGPGPLQSRKQ
Ga0126372_107017461	3300010360	Tropical Forest Soil	MDPAVAALDFAKAGAIIANMIEAYLAAGATPLNAGADHAECEDCRSSSSA
Ga0126377_108355511	3300010362	Tropical Forest Soil	MDPAVATLDFAKAGAIIANMIESYLAAGAPPFNAEGADHAESEDCRSSSDAKRLHLHSS
Ga0126377_109335981	3300010362	Tropical Forest Soil	MDPAVATLDFAEAGAIIANMIESYLAAGAPPFNAEGADHAESEDCRSSSDAKRLHLHSS
Ga0136643_106537011	3300010369	Termite Gut	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGVDHDEFEDGRSPSGAASL
Ga0126381_1031560162	3300010376	Tropical Forest Soil	MDLAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADRDEFEDGRSPSGAASLHLHSPIDAGPGPLQSRKQGT
Ga0126381_1036720152	3300010376	Tropical Forest Soil	MDLAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSCAA
Ga0126383_101463304	3300010398	Tropical Forest Soil	MDPAIATLDFAEAGAIIANMIEAYLAAGATPFNAEGADHAESEDCRSSSDAKRLHLHSSVDDGASAIQSREH
Ga0126383_107163691	3300010398	Tropical Forest Soil	MDPAVAALDFAKAGAIIANMIESYLAAGALPFNAEGADDAEPEDCRSSSDAKSLHLHSSVDNGASAVQS
Ga0126383_115467593	3300010398	Tropical Forest Soil	MDPAVATLDLAKAGAIIADMIESYLAGGAPSSNPEGADHDDLQDCRSTSVATSLHLHSSVDDGP
Ga0124850_10439051	3300010863	Tropical Forest Soil	MDPAIATFDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTSVA
Ga0151489_10464182	3300011106	Soil	MDPAVAALDFAKAGAIIANMIESYLAAGALPFNAEGADHAEPEDCRSSSDAKSLHL
Ga0137391_105597081	3300011270	Vadose Zone Soil	MDPAVAALDIAKAGVILANMIESYLAGGAPPSNPEGAKHDDLQDRRSTFIAG
Ga0137393_108032311	3300011271	Vadose Zone Soil	MDPAVATFDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTSVATSLH
Ga0120191_101836091	3300012022	Terrestrial	MDPAVAALDFAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAPSLHLHS
Ga0153934_10702981	3300012084	Attine Ant Fungus Gardens	MDPAIAALDFVKAGAIIANMIESYLAAGAPPLNAEGADHAESEDCRSSSDPTSVHLHSSVDAGASA
Ga0137343_10312913	3300012142	Soil	MDPAVATLDLAKAGAIIADMIESYLAGGALPSNPEGDDHDDLQDCRSTSVAGSLHLHSSVDDGA
Ga0137363_105963473	3300012202	Vadose Zone Soil	MDPAVAALDFVKAGAILANMIESYLAGGAPPSTTEGADHDDLQDCRSTSVATSLHLHSSV
Ga0137376_115082872	3300012208	Vadose Zone Soil	MDPAVAALDFAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAPSL
Ga0137378_118653482	3300012210	Vadose Zone Soil	MHPAVATLDLAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTSVEASLHLHSSIDAGASPLQSGEHRAP
Ga0137360_107285863	3300012361	Vadose Zone Soil	MDPAVATFDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTSV
Ga0137361_109633093	3300012362	Vadose Zone Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGDDHDDLQDCRSTSVAGSLHLHSSIDDGAS
Ga0157320_10309091	3300012481	Arabidopsis Rhizosphere	MDPAVAALDFAKAGAIIANMIESYLAAGATPLNAEGAEHAEREDCRSSFGTASLHLH
Ga0137410_105247661	3300012944	Vadose Zone Soil	MDPAVATLDLAKAGAIIADMIESYLAGGAPPSNPEGDDHDDLQDCRSTSVAGSLHLHSPVDD
Ga0126375_118118692	3300012948	Tropical Forest Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCQSTSVAASLHLHSSIDA
Ga0157358_10821212	3300012996	Fungus Garden	MDPAVAVFDFAKAGVIVANMIESYLAAGALPPNPEGADHVEHQDCRSSSGAARLHLHSAV
Ga0157377_111646432	3300014745	Miscanthus Rhizosphere	MDPAVAALDFAKAGAIIANMIESYLAAGATPLNAEGAEHAEREDCRSSFGTASLHLHSPVDDGTSASQ
Ga0180084_10414221	3300014874	Soil	MDPAVATLDLAKAGAIIADMIESYLAGGALPSNPEGDDHDDLQDCRSTSVAGSLHLHSSVDDG
Ga0180104_10579191	3300014884	Soil	MDPAVATLDLAKAGAIIADMIESYLAGGALPSNPEGDDHDDLQDCRSTSVAGSLHLHSSVDDGASP
Ga0137405_12355301	3300015053	Vadose Zone Soil	MDPAVAALDIAKAGVILANMIESYLAGGAPPSNPEGAEHDDLQDRRSTSIAGSLHLHSSIDIYIRQSTM
Ga0132258_128074691	3300015371	Arabidopsis Rhizosphere	MDPAVATLDFAKAGAIIANMIESYLAAGAPPFDAEGADHAEPEDCRSSSDAKSLHLHSSV
Ga0182033_107105823	3300016319	Soil	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAASLHLHSPIDAGPGPLQSRKQG
Ga0182032_107593111	3300016357	Soil	MDPAVATLDLAKAGAIIADMIESYLAGGAPSSNPEGADHDDLQDCRSTSVAASLHLHSSIDAG
Ga0182040_101542464	3300016387	Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLDLQDCRSTFVAGSLHLYSSVDDGPSPLQPG
Ga0187820_13062452	3300017924	Freshwater Sediment	MDPAVATFDFAKAGAIIADMIESYLAGGASPSNPEGADHDDLQDCRSTSVATSL
Ga0187819_104008391	3300017943	Freshwater Sediment	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNIEGADHDEFEDGRSPSGAASLHLHSPIDAGPGPLQ
Ga0187782_107189213	3300017975	Tropical Peatland	MDLAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAASLHLHSP
Ga0187823_100310651	3300017993	Freshwater Sediment	MDQAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAASLHLHSSIDA
Ga0187822_101565951	3300017994	Freshwater Sediment	MDQAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAASLHLHS
Ga0187805_100521915	3300018007	Freshwater Sediment	MDPAVAALDIAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAPS
Ga0187805_103866821	3300018007	Freshwater Sediment	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAASLHLHSPI
Ga0187766_109037572	3300018058	Tropical Peatland	MDPAVATLDLTKAGAIIANMIESYLAGGAPLPNVEGADHDEFEDGRSPSGAASL
Ga0187772_110194331	3300018085	Tropical Peatland	MDSAVATLDFAKAGAIIANMIESYLAAGATPLNAEGAEYAEREDCRSSFGTASL
Ga0187768_10434931	3300020150	Tropical Peatland	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAAS
Ga0210399_112764471	3300020581	Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAASLHL
Ga0210404_105446411	3300021088	Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAARLHL
Ga0210405_105989511	3300021171	Soil	MDPAVAALDFAKAGAIIANMIEAYLAAGATPLNAEGAEHAECQDCRSSSSAPSLHLHSPVDD
Ga0210408_102185901	3300021178	Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAARLHLH
Ga0213879_100756151	3300021439	Bulk Soil	MDLAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLHL
Ga0126371_115194511	3300021560	Tropical Forest Soil	MDPAVAALDITKAGVILANMIESYLAGGAPPVNPEGAEDDDLQDRRSTSVAGSLHLHSSIDDGAGP
Ga0247695_10224801	3300024179	Soil	MDPAVAALDFAKAGAIIANMIESYLAAGASPFNAEGADHAEPEDRRSSSDAKSLHL
Ga0207663_100975891	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDSAVAALDIAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAPSL
Ga0207644_116543771	3300025931	Switchgrass Rhizosphere	MDPAVATLDFAKAGAIIANMIESYLAAGAPPFNEGADHAESEDCRSSS
Ga0257176_10503871	3300026361	Soil	MDPAVAALDIAKAGVILANMIESYLAGGAPPSNPEGAEYDDLQDRRSTSVAG
Ga0257146_10638401	3300026374	Soil	MDPAVAAFDFAKAGAIVANMIESYLAAGALPPNPEGADHVEHQDCRSSSGAARLHLHSAVES
Ga0257147_10535162	3300026475	Soil	MDPAVAGLDFAKAGIVLANMIESYLAGGAPPSNPEGSVHDKPQDRRSTSVTASL
Ga0257156_11334991	3300026498	Soil	MDPAVATLNFAQAGAIIANMIESYLAAGAPPLNAEGADHAESEDCRSSSDAKS
Ga0257161_10085004	3300026508	Soil	MDPAVATLDFAKAGAIIANMIESYLAGGAPPSNPEGDDHDDLQDCRSTSVAGSLHLHSSIDDG
Ga0207786_1070661	3300026866	Tropical Forest Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTFVAGSLH
Ga0207785_10043854	3300026872	Tropical Forest Soil	MDPAVATLDLAKAGAIIADMIESYLAGDAPSSNPEGADHDDLQDCRSTS
Ga0207766_10327321	3300027042	Tropical Forest Soil	MDPAVAALDFAKAGAIIANMIESYLAAGALPFNAEGADHAEPEDCRSSSDAKSLHLHSSVDN
Ga0207762_10251491	3300027063	Tropical Forest Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTFVAGSLHLYSSVDDGPSP
Ga0208603_10483031	3300027109	Forest Soil	MDPAVAALDIAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVA
Ga0208890_10203601	3300027523	Soil	MDPAVATLDLAKAGAIIADMVESFLAGGAPPSNPEGADHDDLQDCRSTSVAPSLHLHSSIDAGTSPL
Ga0209527_10039561	3300027583	Forest Soil	MDPAVAALDLTKAGAIIASMIESYLAAGATPPNAEGTEHAEFENSRASSGAAGLHL
Ga0208044_11725891	3300027625	Peatlands Soil	MDPAVATLDFAKAGAIIANMIESYLAAGAPPFNAEGADHAEPEDRRSSSDAKSL
Ga0209625_10108924	3300027635	Forest Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAASLHLHSSI
Ga0209118_10392013	3300027674	Forest Soil	MDPAVAALDIAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDSRSTSVAPSLHLHSSV
Ga0209655_102512031	3300027767	Bog Forest Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGALPPNPEGADHVEHQDCRSSSGAARLHLHSAV
Ga0209889_10420954	3300027952	Groundwater Sand	MDPAIAALDIAKAGAIIASMVESYLAAGAPPSEQEGAKHDVIQDQRSTSVANGLHLHSPVDGGAS
Ga0307503_102214551	3300028802	Soil	MDPAVAALDFAKAGAILANMIESYLAGGAPPSNPEGADHDDLQDCRSTSVAPSLHLHSPVDD
Ga0222748_11167321	3300029701	Soil	MDPAVATLDLAKAGAIIADMIESYLAGGAPSSNPEGADHDDLQDCRSTSVAASLHLHSSIDAGASP
Ga0310039_100468161	3300030706	Peatlands Soil	MDPAVATLDFAKAGAIIANMIESYLAAGAPPFNAEGADHAEPEDRRSSSDAKSLHLH
Ga0075374_114661051	3300030855	Soil	MDPAVATLDFAKASAIIANMIESYLAAGAPPLNAEGADHAESEDCRSSSDAKRLHLHS
Ga0075373_113442981	3300030945	Soil	MDPAVATLDFAKASAIIANMIESYLAAGAPPFNAEGADHAESEDCRSSSDAKRLHLHSSVDD
Ga0075376_110301881	3300030968	Soil	MDPAVAALDFAKAGAIIANMIESYLAAGALPFNAEGADHAEPEDCRSSSD
Ga0307496_101413542	3300031200	Soil	MDPAVATLDFVKAGAILANMIESYLAGGAAPTNTEGADHDDFQDCRSPSVAASLHLHS
Ga0170824_1194874021	3300031231	Forest Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTSVA
Ga0265327_102488613	3300031251	Rhizosphere	MDPAVATFDLAKAGAILANMIESYLAAGAPPFETEGADDDLEDCQPTSVAGSLHLH
Ga0311364_121469691	3300031521	Fen	MDPAIATLDYVEAGAILANMIESYLAGGAPPSNTEGPEHDDLQDCRSPPVAASLHLHPTI
Ga0318516_102980773	3300031543	Soil	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLHLHSPIDAGPGPLQSRK
Ga0318560_103814062	3300031682	Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLQDCRSTFVAGSLD
Ga0307476_103377151	3300031715	Hardwood Forest Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAASLH
Ga0307476_104373384	3300031715	Hardwood Forest Soil	MDPAIAALDFVKAGAIIANMIESYLAAGAPPLDAEGANHAESEDCRSSSGPTSLHLHSSV
Ga0306917_105246871	3300031719	Soil	MDPAVATLDLAKAGAIIADMIESYLAGGAPSSNPEGADHDDFQDCRSTSVAAS
Ga0318493_105335182	3300031723	Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGALPPNPEGAHHVEHQDCRSSSGAARLHLHSAVDTGT
Ga0318500_102361383	3300031724	Soil	MDPAVAALDFAKAGAIIANMIESYLAAGATPLNAEGAEHAEREDCRSSFG
Ga0306918_115034792	3300031744	Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLHLHSPIDA
Ga0318543_102437011	3300031777	Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGAPPPNPEGAHHVEHQDCRSSP
Ga0318508_10667741	3300031780	Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGAPPPNPEGAHHVEHQDCRSSFGAARLHLHSAVDTGTSALQSR
Ga0318547_103280511	3300031781	Soil	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLHLHS
Ga0318552_103081693	3300031782	Soil	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAA
Ga0318567_107125511	3300031821	Soil	MDPAVATLDFAKAGAIIADMIESYLAGGAPPSNPEGADHDDLDLQDCRSTFVAGSLHLY
Ga0318564_105422981	3300031831	Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLH
Ga0318495_101913323	3300031860	Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLHLHSPIDAGPGPL
Ga0306919_104717881	3300031879	Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGAPPPNPEGAHHVEHQDCRSSFGAA
Ga0306919_108789601	3300031879	Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAASLHLHSPIDAGPGPL
Ga0318544_103258701	3300031880	Soil	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAASLH
Ga0306925_107904541	3300031890	Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGAPPPNPEGAHHVEHQDCRSSFGAARLHLHSAV
Ga0318522_101873613	3300031894	Soil	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPS
Ga0306921_104461621	3300031912	Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAPSLHLHSSI
Ga0306921_111511713	3300031912	Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAASLHLHSPIDARPDPL
Ga0310912_101805761	3300031941	Soil	MEPAVATLDLTKAGTIIASMIESYLAGGAPLLNMQGADHDKFEDGRSPSGAASLHLHSPIDAGPG
Ga0310916_114844141	3300031942	Soil	MDPAVATLDLAKAGAIIADMIESFLAGGAPPSNPEGADHDDLQDCRSTSVAPSLHL
Ga0310910_106357741	3300031946	Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAASLHLHSPI
Ga0310909_102904091	3300031947	Soil	MDPAVAALDLTKAGAIIANMIESYLAGGAPLPNMEGADHDEFEDDRSPSGAASLHLHSPIDAGPG
Ga0318513_103579561	3300032065	Soil	MDPAVAALDLTKAAAIIANMIESYLAGGAPLPNMEGADHDEFEDGRSPSGAA
Ga0335077_108433301	3300033158	Soil	MDPAVAALDFAKAGAIIANMIESYLAAGASPFNAEGADHAEPEDCRSSS
Ga0310914_106994021	3300033289	Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGALPPNPEGADHVEHQDCRSSSGAARLHLHSAVDTGASA
Ga0318519_103227261	3300033290	Soil	MDPAVAAFDFAKAGVIVANMIESYLAAGALPPNPEGADHVEHQDCRSSSGAA
Ga0370502_0074251_862_1074	3300034156	Untreated Peat Soil	MDPAVATLDFAKAGAIIANMIESYLAAGAPPFDAEGADHAEPEDCRSSSGAKSLHLHSSVDDGASAIQSGE
Ga0364923_0142395_2_193	3300034690	Sediment	MDPAVAALDFAQAGAILANMIESYLAIGAPPSEPGDSTNDDKQDCRTPSVAGSLCLHSPVDDEP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048591

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences