NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F048549

Metagenome / Metatranscriptome Family F048549

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F048549
Family Type Metagenome / Metatranscriptome
Number of Sequences 148
Average Sequence Length 39 residues
Representative Sequence MTVTVTPRPPVATAAHAFTLPTVRELPPVARPGTFDSTW
Number of Associated Samples 85
Number of Associated Scaffolds 148

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 55.41 %
% of genes near scaffold ends (potentially truncated) 29.05 %
% of genes from short scaffolds (< 2000 bps) 87.16 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (79.054 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(32.432 % of family members)
Environment Ontology (ENVO) Unclassified
(40.541 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.135 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.
1C688J35102_1191750512
2C688J35102_1193499642
3C688J35102_1201236292
4Ga0055470_101327531
5Ga0063454_1019798511
6Ga0063356_1058350291
7Ga0062594_1002546353
8Ga0070674_1012654052
9Ga0070667_1014916131
10Ga0068867_1015289712
11Ga0070679_1008018021
12Ga0070672_1020345472
13Ga0070693_1014856211
14Ga0068855_1008636361
15Ga0070664_1021618922
16Ga0070702_1004012713
17Ga0068870_103936743
18Ga0068858_1001970643
19Ga0081455_102429743
20Ga0081455_102918671
21Ga0081538_1000024249
22Ga0081538_100342674
23Ga0081538_100738252
24Ga0081538_101121381
25Ga0081538_101526072
26Ga0081538_101752154
27Ga0081538_101766391
28Ga0081539_100198965
29Ga0081539_103555402
30Ga0066652_1000161056
31Ga0066652_1002478322
32Ga0075432_102602192
33Ga0082029_17826902
34Ga0075422_103940512
35Ga0075428_1000927902
36Ga0075428_1001795972
37Ga0075428_1022542742
38Ga0075421_1021906002
39Ga0075429_1015549483
40Ga0075419_111788382
41Ga0079218_102315542
42Ga0079218_112884433
43Ga0079218_120933832
44Ga0111539_102827013
45Ga0111539_104481992
46Ga0111539_109373401
47Ga0111539_110166301
48Ga0111539_112559522
49Ga0075418_103078371
50Ga0075418_131592941
51Ga0114129_116493442
52Ga0111538_108897782
53Ga0105092_102138783
54Ga0105092_107461833
55Ga0075423_131499701
56Ga0105238_102650612
57Ga0105249_109365463
58Ga0126304_109438141
59Ga0126315_101476684
60Ga0126308_102459421
61Ga0126314_105723211
62Ga0126314_108126621
63Ga0126314_113725601
64Ga0126310_116872632
65Ga0126311_114252252
66Ga0134125_104926003
67Ga0134126_114770273
68Ga0134127_113443783
69Ga0134121_126043082
70Ga0134123_105516052
71Ga0134123_112188873
72Ga0134123_124563502
73Ga0150984_1006214982
74Ga0150984_1103916181
75Ga0075322_11705362
76Ga0132255_1043117802
77Ga0190266_110153082
78Ga0184619_102127862
79Ga0190265_100433344
80Ga0190265_100773324
81Ga0190265_100979903
82Ga0190265_101130613
83Ga0190265_101299884
84Ga0190265_102036332
85Ga0190265_103300703
86Ga0190265_104139703
87Ga0190265_109231191
88Ga0190265_110539761
89Ga0190265_111479962
90Ga0190265_115742572
91Ga0190265_116599272
92Ga0190265_116640982
93Ga0190265_118399262
94Ga0190265_125415521
95Ga0190265_126803742
96Ga0190265_136583421
97Ga0190265_137223792
98Ga0190272_105108862
99Ga0190272_113670751
100Ga0190272_116055281
101Ga0190272_119358761
102Ga0190275_101336342
103Ga0190275_106681581
104Ga0190269_114028471
105Ga0190268_100315172
106Ga0190268_102283492
107Ga0190270_116590692
108Ga0190270_134415972
109Ga0190274_122251082
110Ga0190271_100780232
111Ga0190271_102743151
112Ga0184643_14300851
113Ga0184642_14253442
114Ga0190264_105386062
115Ga0190264_120373752
116Ga0190264_122207982
117Ga0222622_102634093
118Ga0222622_103592961
119Ga0196962_100152193
120Ga0196962_100461982
121Ga0196962_100594072
122Ga0196962_102335312
123Ga0207709_101626912
124Ga0207669_110168181
125Ga0214469_10567933
126Ga0207428_100704502
127Ga0207428_101557412
128Ga0207428_112312191
129Ga0209382_118619601
130Ga0307276_101531941
131Ga0307301_100924362
132Ga0307318_100501072
133Ga0307282_104273642
134Ga0307287_103305591
135Ga0307302_103627412
136Ga0307302_105716012
137Ga0307286_102900033
138Ga0299907_102607542
139Ga0268386_100738635
140Ga0102757_111061541
141Ga0307501_102811931
142Ga0299914_104250132
143Ga0307406_100619762
144Ga0307406_102445633
145Ga0307406_106855852
146Ga0307406_113451992
147Ga0307416_1001673362
148Ga0307415_1006737572
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 4.48%    β-sheet: 0.00%    Coil/Unstructured: 95.52%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

5101520253035MTVTVTPRPPVATAAHAFTLPTVRELPPVARPGTFDSTWSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
79.1%20.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Groundwater Sediment
Natural And Restored Wetlands
Groundwater Sediment
Groundwater Sediment
Soil
Terrestrial Soil
Serpentine Soil
Termite Nest
Soil
Agricultural Soil
Soil
Soil
Soil
Natural And Restored Wetlands
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Soil
Arabidopsis Rhizosphere
Corn Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
32.4%4.7%5.4%4.7%14.9%4.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_11917505123300002568SoilMTIVVTPRPPISAAAHVFSMPVVRELPPVQRPGMFDTTW*
C688J35102_11934996423300002568SoilMTLTVTPRPPVASTAHAFSLPTVREIPPVQRPGTFSSIW*
C688J35102_12012362923300002568SoilLEMPRRWSIRAMTIVVTPRPPIAAAHAYSTPIVREIPPVQRPGMFDATW*
Ga0055470_1013275313300003992Natural And Restored WetlandsVTVTVTPRPPVASTAHAFSLPVAREIPPVVRPGMFSSTW*
Ga0063454_10197985113300004081SoilAGAKGLLPMTLTVTPRPPVASTAHAFSLPTVREIPPVQRPGTFSSIW*
Ga0063356_10583502913300004463Arabidopsis Thaliana RhizosphereFAVTVTITSRVPVATAHVYTRPTVRELPPLPRPGTFDSTW*
Ga0062594_10025463533300005093SoilLEMSHRWSIRAMTIVVTPRPPIAAAHVYSTPIVREIPPVQRPGMFDATW*
Ga0070674_10126540523300005356Miscanthus RhizosphereTAHPHPTMSPLPTPRPPAHRHVYVAAVVRELPPVSRPGQFASTW*
Ga0070667_10149161313300005367Switchgrass RhizosphereLEMSHRWSIRTMTIIVTPRPPIAAAHVYSTPIVREIPPVQRPGMFDATW*
Ga0068867_10152897123300005459Miscanthus RhizosphereMTIVVTPRRPIAAAEHVFTTPVVRELPPVQRPGMYDSTW*
Ga0070679_10080180213300005530Corn RhizosphereMTIVVTPRPPIAAAAHAFSTPVVRELPPVQRPGMFDTTW*
Ga0070672_10203454723300005543Miscanthus RhizosphereMTIVVTPRPPIAAAHVYSTPIVREIPPVQRPGMFDATW*
Ga0070693_10148562113300005547Corn, Switchgrass And Miscanthus RhizosphereMTIVVTPRPPIAAAAHVFTTPVVRELPPVQRPGMYDSTW*
Ga0068855_10086363613300005563Corn RhizosphereAAAKGLPPVTVTVTPRPPVASTAHAFSLPVVRELPPVVRPGTFSSTW*
Ga0070664_10216189223300005564Corn RhizosphereMSPLPTPRPPAHRHVYVAAVVRELPPVSRPGQFASTW*
Ga0070702_10040127133300005615Corn, Switchgrass And Miscanthus RhizosphereAMTIVVTPRPPIAAAHVYSTPIVREIPPVQRPGMFDATW*
Ga0068870_1039367433300005840Miscanthus RhizosphereMTVVAPRPPIAAATHVFSTPVVRELPPVQRPGMFDSTW*
Ga0068858_10019706433300005842Switchgrass RhizosphereVTVTVTPRPPVASTAHAFSLPVVRELPPVVRPGTFSSTW*
Ga0081455_1024297433300005937Tabebuia Heterophylla RhizosphereVTVTVTPRRPAATAHAFSSPTVREIPPVQRPGTFDSTW*
Ga0081455_1029186713300005937Tabebuia Heterophylla RhizosphereMSPIVTPRPPVSAQHAFTTPVVRELPPVYRPGTFDSTW*
Ga0081538_10000242493300005981Tabebuia Heterophylla RhizosphereMSMTVTVTPRPPVATAAHAFTLPTVRELPPVARPGTFDSTW*
Ga0081538_1003426743300005981Tabebuia Heterophylla RhizosphereMTVVAPRPPIAAATHVFSTPIVRELPPVQRPGMFDSTW*
Ga0081538_1007382523300005981Tabebuia Heterophylla RhizosphereMTVTVTPRPPVATAAHAFTLPTVRELPPVARPGTFDSTW*
Ga0081538_1011213813300005981Tabebuia Heterophylla RhizosphereARASIRVVTVTVTPRPPAAAAHAFSLPLVREIPPVQRPGTFDSTW*
Ga0081538_1015260723300005981Tabebuia Heterophylla RhizosphereMSMTVTITPRPPVATAGHAFTLPVVRELPPVARPGTFDSTW*
Ga0081538_1017521543300005981Tabebuia Heterophylla RhizosphereVTVTVTPRRPAAAAHAFSLPTVREIPPVPRPGTFASTW*
Ga0081538_1017663913300005981Tabebuia Heterophylla RhizosphereVTATVTPRPPVATTAHAFQIPTVREIPPVPRPGTFSSIW*
Ga0081539_1001989653300005985Tabebuia Heterophylla RhizosphereMTIVVTPRPPAAAHAFSTPVVRELPPVQRPGMFDATW*
Ga0081539_1035554023300005985Tabebuia Heterophylla RhizosphereMTVTITPRPPVASAAHAFSLPTVREIPPVQRPGTFSSTW*
Ga0066652_10001610563300006046SoilMTIVVTPRPPISAAAHVFSMPVVRELPPVRRPGMFDTTW*
Ga0066652_10024783223300006046SoilVTVTVTPRPPVASTAHAFSLPTVREIPPVVRPGTFSSSW*
Ga0075432_1026021923300006058Populus RhizosphereAAGAAAEAMTVVVTPRPPIAAAHAFTTPVVREMPPVHRPGTFDSTW*
Ga0082029_178269023300006169Termite NestMSPTVTPRPLVSAQHAYTTPVVRELPPVYRPGTFDSTW*
Ga0075422_1039405123300006196Populus RhizosphereVTVTVTPRRPAAAHAFSLPTVREIPPVQRPGAFDSTW*
Ga0075428_10009279023300006844Populus RhizosphereMTVVAPRPPIAAATHAFSTPVVRELPPVQRPGMFDSTW*
Ga0075428_10017959723300006844Populus RhizosphereVTVTVTPRRPAASSPRFFTLPSVRELPPVQRPGTYASTW*
Ga0075428_10225427423300006844Populus RhizosphereMNSVTVTVTPRRPAAAHAFSLPTVREIPPVQRPGAFDSTW*
Ga0075421_10219060023300006845Populus RhizosphereMSMTVTVTPRPPVATAHAFTLPVVRELPPVARPGTFDSTW*
Ga0075429_10155494833300006880Populus RhizosphereVTVTVTPRRPVATAHAFALPVVREIPPVQRPGTFSSTW*
Ga0075419_1117883823300006969Populus RhizosphereVTVTVTPRRPALAAHAFSSPTVREIPPVQRPGTFDSTW*
Ga0079218_1023155423300007004Agricultural SoilMTVTITPRPPVAAGHAFTLPVVRELPPVARPGTFDSTW*
Ga0079218_1128844333300007004Agricultural SoilEPAMTVTITPRPPASGAPHVFSTPTVRELPPVARPGTFAATW*
Ga0079218_1209338323300007004Agricultural SoilMTVTVTPRPPVRTAAHAFTLPTVRELPPVARPGTFASTW*
Ga0111539_1028270133300009094Populus RhizosphereVTVTVTPRNPAATARHAFSLPTVRELPPVARPGTFASTW*
Ga0111539_1044819923300009094Populus RhizosphereMSPIVTPRPPVATHAYTLPVVRELPPVSRPGTFDSTW*
Ga0111539_1093734013300009094Populus RhizosphereMTVVVTPRPPIAAAHAFTTPVVREMPPVHRPGTFDSTW*
Ga0111539_1101663013300009094Populus RhizosphereSIPAMNSVTVTVTPRRPAAAHAFSLPTVREIPPVQRPGAFDSTW*
Ga0111539_1125595223300009094Populus RhizosphereMTVTVTPRPPVATAGHAFTLPVVRELPPVARPGTFDSTW*
Ga0075418_1030783713300009100Populus RhizosphereMTVVVTPRPPIAAAHAFTTPVVREMPPVHRPGTFDST
Ga0075418_1315929413300009100Populus RhizosphereGLPVTVTVTPRRPALAAHAFSSPTVREIPPVQRPGTFDSTW*
Ga0114129_1164934423300009147Populus RhizosphereMTAPPRPRITAAPHAYTIPVVRELPPVQRPGMFDTTW*
Ga0111538_1088977823300009156Populus RhizosphereMTVTVTPRPPVATAGHAFTLPVVREMPPVARPGMFDSTW*
Ga0105092_1021387833300009157Freshwater SedimentSLRVTANERVPPMSPTVTPRPPVSAQHAFSTPVVRELPPVYRPGTFDSTW*
Ga0105092_1074618333300009157Freshwater SedimentVTVTITPRRPAAAAHAFSFPTVREIPPVQRPGMFDS
Ga0075423_1314997013300009162Populus RhizosphereMTIVVTPRPPIAAAHVYSTPIVREIPPVQRPGLFDSTW*
Ga0105238_1026506123300009551Corn RhizosphereMTIVVTPRPPIAAAHAYSTPIVREIPPVQRPGMFDATW*
Ga0105249_1093654633300009553Switchgrass RhizosphereAAKAAMTIVVTPRPPITAAAHAYSTPVVRELPPVQRPGMFDTTW*
Ga0126304_1094381413300010037Serpentine SoilVTITPRPPVATAHAYSLPVVREIPPVQRPGTFSATW*
Ga0126315_1014766843300010038Serpentine SoilMTVLAPRPPIAAATHSFSTPVVRELPPVQRPGMFDSTW*
Ga0126308_1024594213300010040Serpentine SoilRLPAGSLVLVTATVTPRPPVSTTAHAFQLPTVREIPPVPRPGMFSSTW*
Ga0126314_1057232113300010042Serpentine SoilVTVTPRRPAASSPRYFTVPTVRELPPVARPGTYASTW*
Ga0126314_1081266213300010042Serpentine SoilSCIVTVTVTPRPPVANTAHAFTLPNVREIPPVFRPGTFSSTW*
Ga0126314_1137256013300010042Serpentine SoilMTIVVTPRPPLAAATHVFSTPVVRELPPVPRPGTFDFTW*
Ga0126310_1168726323300010044Serpentine SoilMTVLAPRPPIAAAAHTFSIPVVRELPPVQRPGMFDSTW*
Ga0126311_1142522523300010045Serpentine SoilMTVLAPRPPIAAAAHTFSIPVVRELPPVQRPGTFDSTW*
Ga0134125_1049260033300010371Terrestrial SoilMTIVVTPRPPIAAAAHTFSTPVVRELPPVQRPGMFDTTW*
Ga0134126_1147702733300010396Terrestrial SoilVTPRPPIAAAHAFSTPVVRELPPVQRPGMFDTTW*
Ga0134127_1134437833300010399Terrestrial SoilMTIVVTPRPPIAAAAHVFTTPVVRELPPVQRPGMFDSTW*
Ga0134121_1260430823300010401Terrestrial SoilMTIVVTPRPPIAAAAHAFSTPVVRELPPVQRPGMFDSTW*
Ga0134123_1055160523300010403Terrestrial SoilTVTPRPPAAITAHAFSLPTVREIPPVPRPGTFSSAW*
Ga0134123_1121888733300010403Terrestrial SoilVVTPRPPIAAAHVYSTPIVREIPPVQRPGMFDATW*
Ga0134123_1245635023300010403Terrestrial SoilMTVVAPRPPIAAATHVFSTPVVRELPPVQRPGMFDST
Ga0150984_10062149823300012469Avena Fatua RhizosphereTVVAPRPPIAAATHTFSTPVVRELPPVQRPGMFDSTW*
Ga0150984_11039161813300012469Avena Fatua RhizosphereRHQPRPPIAAAHAYSTPIVREIPPVQRPGMFDATW*
Ga0075322_117053623300014311Natural And Restored WetlandsVTVTVTPRPPVASTAHAFSLPVAREIPPVVRPGMFS
Ga0132255_10431178023300015374Arabidopsis RhizosphereMTLVVTPRPPIAAAPAFTTPVVRELPPVNRPGMFDATW*
Ga0190266_1101530823300017965SoilKTMTIMVTPRPPIAAAAHVFTTPVVRELPPVQRPGMFDSTW
Ga0184619_1021278623300018061Groundwater SedimentVPVTVTPRRPSANASHAFGLPTVRELPSVARPGTFD
Ga0190265_1004333443300018422SoilVPVTVTPRRPAATAPHVYMLATVRELPPVARPGTFDSTW
Ga0190265_1007733243300018422SoilMTVVVTPRQPIAAASHVYTTPVVRELPPVQRPGTFSATW
Ga0190265_1009799033300018422SoilMSMTVTVTPRPPVRSAAHAFTLPTVRELPPVARPGTFDSTW
Ga0190265_1011306133300018422SoilMTVTITPRPPASGAPHVYSTATVRELPPVARPGTFAATW
Ga0190265_1012998843300018422SoilVTVTVTPRPPVATTAHAFSLPTVREIPPVYRPGTFASTW
Ga0190265_1020363323300018422SoilMTVTITPRPPAAGTTHMFSAPTVRELPPVARPGTFAATW
Ga0190265_1033007033300018422SoilMSPIVTSRPPMTAQHAYTTPVVRELPPVYRPGTFDSTW
Ga0190265_1041397033300018422SoilMTQMVTPRPPVQTSQHVFTLPTVREMPPVARPGTFDSTW
Ga0190265_1092311913300018422SoilVPVTVTPRRPAANAPHAFMLATVRELPPVTRPGTFDATW
Ga0190265_1105397613300018422SoilMTVVATPRPPAAASHTYTLPVVRELPPVARPGMFDATW
Ga0190265_1114799623300018422SoilVPVTVTPRRPAANAPHAFMLATVRELPPVARPGTFDATW
Ga0190265_1157425723300018422SoilVVTVTITPRVPVATAHVYTLPTVREIPPVQRPGTFDSTW
Ga0190265_1165992723300018422SoilMTVTTTPRPPVDAAGHAFTFPTVRELPPVSRPGTFDSTW
Ga0190265_1166409823300018422SoilMTVTVTPRPPIAAAAHVYTTPVVRELPPVQRPGTFASTW
Ga0190265_1183992623300018422SoilMSVTLTPRLPAPIVHAFSLPTVREIPPVTRPGTFDSTW
Ga0190265_1254155213300018422SoilAKDFVVTVTVTPRVPVATAHVYTIPTVREILPVQRPGTFDSTW
Ga0190265_1268037423300018422SoilMTVVTPRPPAASAPHAYSTPVVREMPPVQRPGTFAATW
Ga0190265_1365834213300018422SoilVTVTITPRMPVATAHAYTLPTVREIPPVQRPGTFDS
Ga0190265_1372237923300018422SoilFAVTVTVTPRMPVATAHAYSLPTVREIPPVQRPGTFASTW
Ga0190272_1051088623300018429SoilMTVTVTPRTPISAASHVFTTPVVREMPPVQRPGTYASTW
Ga0190272_1136707513300018429SoilMTVTVTPRPPVVTAHTFTLPTVRELPPVARPGTFDPTW
Ga0190272_1160552813300018429SoilMTVVITPRQPSAAASHVYTTPVVREMPPVYRPGTFDSTW
Ga0190272_1193587613300018429SoilATVPVTVTPRRPSANAPHAFMLPTVRELPPVARPGTFDATW
Ga0190275_1013363423300018432SoilMTLVAPPRPRTIQHVYSLPVVREVPPVARPGTFAAGW
Ga0190275_1066815813300018432SoilMTVTITPRPPAATAPHVYSTPTVRELPPVARPGTFASTW
Ga0190269_1140284713300018465SoilTVPVTITPRRPAANASHAFGLPTVRELPPVARPGTFDATW
Ga0190268_1003151723300018466SoilMTVTVTPRPPVTAAAHTFTFPTVRELPPVSRPGTFDSTW
Ga0190268_1022834923300018466SoilMSPIVTPRPPVSAQHAYSTPVVRELPPVYRPGTFDSTW
Ga0190270_1165906923300018469SoilMTVVITPRQPSAAASHVYTTPVVREMPPVNRPGTFDSTW
Ga0190270_1344159723300018469SoilMTITVTPRPPIAAAAHVYTTPVVRELPPVQRPGTFASTW
Ga0190274_1222510823300018476SoilMTVVAPRPPIAAATHVFSTPVVRELPPVQRPGMFDSTW
Ga0190271_1007802323300018481SoilMTVTITPRPPVAAAGHAFTLPVVRELPPVARPGTFDSTW
Ga0190271_1027431513300018481SoilVTVTVTPRNPAATARHGFTLPTVRELPPVSRPGTFSSTW
Ga0184643_143008513300019255Groundwater SedimentMTVLVTPRQPTAAASHVYTTPVVREMPPVYRPGMFDSTW
Ga0184642_142534423300019279Groundwater SedimentMTVVVTPRQPTAAASHVYTTPVVREMPPVYRPGMFDSTW
Ga0190264_1053860623300019377SoilMTVTVTPRPPVTAANHTFTFPTVRELPPVSRPGTFDSTW
Ga0190264_1203737523300019377SoilMPVTITPRPPASTAPHVYSTPTVRELPPVARPGTFAATW
Ga0190264_1222079823300019377SoilKDFAVTVTVTPRMPVATAHAYSLPTVREIPPVQRPGTFASTW
Ga0222622_1026340933300022756Groundwater SedimentMTIVVTPRPPISAAAHVFSTPVVRELPPVQRPGMFDTTW
Ga0222622_1035929613300022756Groundwater SedimentVTVTVTPRRPAAAAHAFSLPTVREIPPVQRPGTFDSIW
Ga0196962_1001521933300024430SoilMTVTVTPRPPVATAGHAFTLPVVRELPPVARPGMFDSTW
Ga0196962_1004619823300024430SoilMTVTVTPRPPVATAGHAFTLPVVRELPPVARPGTFDSTW
Ga0196962_1005940723300024430SoilMSPIVTPRPPASAAQHAFTTPVVRELPPVYRPGMFDSTW
Ga0196962_1023353123300024430SoilVTVTPRPPVRTAAHTFTLPTVRELPPVARPGTFDSTW
Ga0207709_1016269123300025935Miscanthus RhizosphereMTIVVTPRLSVAAAHVYSTPIVREIPPVQRPGMFDATW
Ga0207669_1101681813300025937Miscanthus RhizosphereTAHPHPTMSPLPTPRPPAHRHVYVAAVVRELPPVSRPGQFASTW
Ga0214469_105679333300027636SoilMTVTVTPRPPVRSAAHAFTLPTVRELPPVARPGTFDSTW
Ga0207428_1007045023300027907Populus RhizosphereMTVVAPRPPIAAATHAFSTPVVRELPPVQRPGMFDSTW
Ga0207428_1015574123300027907Populus RhizosphereMTVVVTPRPPIAAAHAFTTPVVREMPPVHRPGTFDSTW
Ga0207428_1123121913300027907Populus RhizosphereMSPIVTPRPPVATHAYTLPVVRELPPVSRPGTFDSTW
Ga0209382_1186196013300027909Populus RhizosphereMTIVVTPRPPIAAAAHAFSMPVVRELPPVQRPGLFDSTW
Ga0307276_1015319413300028705SoilMTIVVTPRPPIAAAAHAYSTPVVRELPPVQRPGMFDATW
Ga0307301_1009243623300028719SoilMTVVVPRPPIAAAAHAFSTPVVRELPPVQRPGMFDATW
Ga0307318_1005010723300028744SoilMSPTVTPRRPTSAASHAFTTPVVRELPPVRRPGMFDATW
Ga0307282_1042736423300028784SoilMTIVVTPRPPAAAHAYSTPVVRELPPVQRPGMFDATW
Ga0307287_1033055913300028796SoilMTVTVTPRPPVAAAHAFSLPVVREIPPVQRPSTFAA
Ga0307302_1036274123300028814SoilVTVTITPRRPAASAHAFALPVVREIPPVQRPGTFDATW
Ga0307302_1057160123300028814SoilMTVVVTPRQPTAAASHVYTTPVVREMPPVYRPGTFDSTW
Ga0307286_1029000333300028876SoilCDRRSLARHPAAAARADSFPAVREIPPVLRPGRFDSTW
Ga0299907_1026075423300030006SoilMTVTITPRPPAAGATHMFSAPTVRELPPVARPGTFAATW
Ga0268386_1007386353300030619SoilVTVTVTPRQPAASAPHFFSTPTVRELPPVRRPGTFASTW
Ga0102757_1110615413300030785SoilMTIVVTPRPPIASAHAFTTPVVRELPPVQRPGVFDSTW
Ga0307501_1028119313300031152SoilMTIVVTPRQPIAAAHAYSTPVVRELPPVYRPGMFDTTW
Ga0299914_1042501323300031228SoilMTVTVTPRPPVRTAAHAFTLPTVRELPPVARPGTFDSTW
Ga0307406_1006197623300031901RhizosphereVTVTVTPRRPAASSPRFFTLPTVRELPPVLRSGTYASTW
Ga0307406_1024456333300031901RhizosphereGRWESSLIVTVTPRPPIAITAHAFDLPTVREIPPVQRPGTFSSTW
Ga0307406_1068558523300031901RhizosphereMTVMAPRPPIAAAAHAFSIPVVRELPPVQRPGIFDSTW
Ga0307406_1134519923300031901RhizosphereTATVTPRPPVATAAHAFQLPTVREIPPVPRPGTFSSTW
Ga0307416_10016733623300032002RhizosphereVTVTVTPRPPVATASHAYTLPTVRELPPVSRPGTFASIW
Ga0307415_10067375723300032126RhizosphereMTVLAPRPPIAAAAHSFSTPVVRELPPVQRPGMFDSTW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.