Metagenome / Metatranscriptome Family F048529

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048529
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	96 residues
Representative Sequence	MLLRLLSEPAEGLVYACQEPGCLVRYESPHGYFLDTKDAKTIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKEMGA
Number of Associated Samples	110
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.95 %
% of genes near scaffold ends (potentially truncated)	34.46 %
% of genes from short scaffolds (< 2000 bps)	61.49 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (47.297 % of family members)
Environment Ontology (ENVO)	Unclassified (42.568 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.324 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.56% β-sheet: 19.05% Coil/Unstructured: 75.40%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF07238	PilZ	37.16
PF10431	ClpB_D2-small	8.11
PF00589	Phage_integrase	2.03
PF02894	GFO_IDH_MocA_C	2.03
PF02687	FtsX	1.35
PF14329	DUF4386	1.35
PF00990	GGDEF	1.35
PF07228	SpoIIE	1.35
PF03062	MBOAT	1.35
PF12695	Abhydrolase_5	1.35
PF03551	PadR	1.35
PF00085	Thioredoxin	0.68
PF13205	Big_5	0.68
PF01527	HTH_Tnp_1	0.68
PF14371	DUF4412	0.68
PF07690	MFS_1	0.68
PF02706	Wzz	0.68
PF14100	DUF6807	0.68
PF00082	Peptidase_S8	0.68
PF07676	PD40	0.68
PF03352	Adenine_glyco	0.68
PF01833	TIG	0.68
PF04932	Wzy_C	0.68
PF07724	AAA_2	0.68
PF14559	TPR_19	0.68
PF05199	GMC_oxred_C	0.68
PF01966	HD	0.68
PF01738	DLH	0.68
PF00196	GerE	0.68
PF00072	Response_reg	0.68
PF00550	PP-binding	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0673	Predicted dehydrogenase	General function prediction only [R]	2.03
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.35
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.35
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.35
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.68
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.68
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.46 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	60.14 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	60.14 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101750724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300002908\|JGI25382J43887_10138174	All Organisms → cellular organisms → Bacteria → Acidobacteria	1251	Open in IMG/M
3300004139\|Ga0058897_11145747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005166\|Ga0066674_10000195	All Organisms → cellular organisms → Bacteria	16392	Open in IMG/M
3300005167\|Ga0066672_10002450	All Organisms → cellular organisms → Bacteria	7391	Open in IMG/M
3300005167\|Ga0066672_10658253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300005174\|Ga0066680_10323171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300005181\|Ga0066678_10002257	All Organisms → cellular organisms → Bacteria	7910	Open in IMG/M
3300005450\|Ga0066682_10033205	All Organisms → cellular organisms → Bacteria	3039	Open in IMG/M
3300005451\|Ga0066681_10004084	All Organisms → cellular organisms → Bacteria	6505	Open in IMG/M
3300005451\|Ga0066681_10025653	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300005554\|Ga0066661_10505412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300005586\|Ga0066691_10043953	All Organisms → cellular organisms → Bacteria → Acidobacteria	2368	Open in IMG/M
3300005921\|Ga0070766_10564726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300006041\|Ga0075023_100350970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300006173\|Ga0070716_100000490	All Organisms → cellular organisms → Bacteria	16446	Open in IMG/M
3300006176\|Ga0070765_100011287	All Organisms → cellular organisms → Bacteria → Acidobacteria	6280	Open in IMG/M
3300006755\|Ga0079222_10114518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300006794\|Ga0066658_10084720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1458	Open in IMG/M
3300006806\|Ga0079220_10845971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300007076\|Ga0075435_100519195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300007255\|Ga0099791_10069269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1598	Open in IMG/M
3300007255\|Ga0099791_10177673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300007258\|Ga0099793_10066025	All Organisms → cellular organisms → Bacteria → Acidobacteria	1626	Open in IMG/M
3300007265\|Ga0099794_10465755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300009038\|Ga0099829_10453757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300009038\|Ga0099829_11107077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300009038\|Ga0099829_11297621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300009088\|Ga0099830_10465078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300009089\|Ga0099828_10016628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5639	Open in IMG/M
3300009089\|Ga0099828_10154910	All Organisms → cellular organisms → Bacteria → Acidobacteria	2026	Open in IMG/M
3300009090\|Ga0099827_10068829	All Organisms → cellular organisms → Bacteria → Acidobacteria	2724	Open in IMG/M
3300009090\|Ga0099827_10459336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300009137\|Ga0066709_100006989	All Organisms → cellular organisms → Bacteria	9659	Open in IMG/M
3300009137\|Ga0066709_101010706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1218	Open in IMG/M
3300010325\|Ga0134064_10056632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300010325\|Ga0134064_10098045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300010333\|Ga0134080_10367656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300011120\|Ga0150983_16414426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300011269\|Ga0137392_10328610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300011270\|Ga0137391_10070396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3005	Open in IMG/M
3300011270\|Ga0137391_10097774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2541	Open in IMG/M
3300011271\|Ga0137393_10100186	All Organisms → cellular organisms → Bacteria → Acidobacteria	2364	Open in IMG/M
3300011271\|Ga0137393_10145245	All Organisms → cellular organisms → Bacteria → Acidobacteria	1976	Open in IMG/M
3300012096\|Ga0137389_10566983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300012096\|Ga0137389_10768922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300012096\|Ga0137389_11702546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012189\|Ga0137388_10039106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3764	Open in IMG/M
3300012189\|Ga0137388_10181189	All Organisms → cellular organisms → Bacteria → Acidobacteria	1888	Open in IMG/M
3300012199\|Ga0137383_10849435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300012202\|Ga0137363_10054715	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300012202\|Ga0137363_10094555	All Organisms → cellular organisms → Bacteria → Acidobacteria	2257	Open in IMG/M
3300012203\|Ga0137399_10000506	All Organisms → cellular organisms → Bacteria → Acidobacteria	15593	Open in IMG/M
3300012203\|Ga0137399_11488416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012205\|Ga0137362_10156195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1953	Open in IMG/M
3300012205\|Ga0137362_10189004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1771	Open in IMG/M
3300012206\|Ga0137380_10199763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1814	Open in IMG/M
3300012285\|Ga0137370_10365517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300012357\|Ga0137384_10247156	All Organisms → cellular organisms → Bacteria → Acidobacteria	1489	Open in IMG/M
3300012361\|Ga0137360_10005380	All Organisms → cellular organisms → Bacteria	7831	Open in IMG/M
3300012362\|Ga0137361_10064929	All Organisms → cellular organisms → Bacteria → Acidobacteria	3067	Open in IMG/M
3300012363\|Ga0137390_10425236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300012363\|Ga0137390_11332895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300012403\|Ga0134049_1027895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012582\|Ga0137358_10044979	All Organisms → cellular organisms → Bacteria → Acidobacteria	2931	Open in IMG/M
3300012582\|Ga0137358_10119494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1791	Open in IMG/M
3300012582\|Ga0137358_10930378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300012685\|Ga0137397_10001004	All Organisms → cellular organisms → Bacteria	19670	Open in IMG/M
3300012917\|Ga0137395_10082384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2102	Open in IMG/M
3300012917\|Ga0137395_11173097	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300012918\|Ga0137396_10024614	All Organisms → cellular organisms → Bacteria → Acidobacteria	3914	Open in IMG/M
3300012922\|Ga0137394_10026337	All Organisms → cellular organisms → Bacteria	4696	Open in IMG/M
3300012922\|Ga0137394_11296899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300012923\|Ga0137359_10727097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300012923\|Ga0137359_11137118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300012925\|Ga0137419_11507639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012925\|Ga0137419_11809258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012925\|Ga0137419_11923841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012927\|Ga0137416_10368092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300012929\|Ga0137404_10078008	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300012944\|Ga0137410_10044366	All Organisms → cellular organisms → Bacteria → Acidobacteria	3147	Open in IMG/M
3300012944\|Ga0137410_12055195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300014166\|Ga0134079_10058200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300015054\|Ga0137420_1176167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4194	Open in IMG/M
3300015241\|Ga0137418_10458913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300015241\|Ga0137418_10589961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300015264\|Ga0137403_10516728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300017657\|Ga0134074_1000273	All Organisms → cellular organisms → Bacteria → Acidobacteria	19020	Open in IMG/M
3300018431\|Ga0066655_10000759	All Organisms → cellular organisms → Bacteria → Acidobacteria	11060	Open in IMG/M
3300018433\|Ga0066667_10000443	All Organisms → cellular organisms → Bacteria → Acidobacteria	13977	Open in IMG/M
3300020199\|Ga0179592_10426781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300020579\|Ga0210407_10003055	All Organisms → cellular organisms → Bacteria	13833	Open in IMG/M
3300020579\|Ga0210407_10012647	All Organisms → cellular organisms → Bacteria	6276	Open in IMG/M
3300020580\|Ga0210403_10117937	All Organisms → cellular organisms → Bacteria → Acidobacteria	2159	Open in IMG/M
3300020580\|Ga0210403_10898006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300020581\|Ga0210399_10001739	All Organisms → cellular organisms → Bacteria	17041	Open in IMG/M
3300021088\|Ga0210404_10011650	All Organisms → cellular organisms → Bacteria	3621	Open in IMG/M
3300021088\|Ga0210404_10475260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300021168\|Ga0210406_11239547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021170\|Ga0210400_10217547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1556	Open in IMG/M
3300021171\|Ga0210405_10000420	All Organisms → cellular organisms → Bacteria	57629	Open in IMG/M
3300021180\|Ga0210396_10017743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6604	Open in IMG/M
3300021181\|Ga0210388_10006268	All Organisms → cellular organisms → Bacteria → Acidobacteria	9341	Open in IMG/M
3300021432\|Ga0210384_10020943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6292	Open in IMG/M
3300021433\|Ga0210391_10286434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300021479\|Ga0210410_10005758	All Organisms → cellular organisms → Bacteria	10759	Open in IMG/M
3300021559\|Ga0210409_10079705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3036	Open in IMG/M
3300021559\|Ga0210409_11408628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300022713\|Ga0242677_1020429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300022714\|Ga0242671_1043940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300024286\|Ga0247687_1070657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300024330\|Ga0137417_1062217	All Organisms → cellular organisms → Bacteria → Acidobacteria	2542	Open in IMG/M
3300025939\|Ga0207665_10000015	All Organisms → cellular organisms → Bacteria → Acidobacteria	133147	Open in IMG/M
3300026306\|Ga0209468_1000113	All Organisms → cellular organisms → Bacteria → Acidobacteria	38430	Open in IMG/M
3300026309\|Ga0209055_1044785	All Organisms → cellular organisms → Bacteria → Acidobacteria	1936	Open in IMG/M
3300026310\|Ga0209239_1139015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300026314\|Ga0209268_1043453	All Organisms → cellular organisms → Bacteria → Acidobacteria	1464	Open in IMG/M
3300026317\|Ga0209154_1089511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1320	Open in IMG/M
3300026324\|Ga0209470_1002683	All Organisms → cellular organisms → Bacteria → Acidobacteria	12515	Open in IMG/M
3300026329\|Ga0209375_1018371	All Organisms → cellular organisms → Bacteria	4071	Open in IMG/M
3300026551\|Ga0209648_10027499	All Organisms → cellular organisms → Bacteria → Acidobacteria	4972	Open in IMG/M
3300026551\|Ga0209648_10147366	All Organisms → cellular organisms → Bacteria → Acidobacteria	1863	Open in IMG/M
3300026551\|Ga0209648_10181659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300026551\|Ga0209648_10673875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300026552\|Ga0209577_10507782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300026555\|Ga0179593_1018731	All Organisms → cellular organisms → Bacteria → Acidobacteria	3189	Open in IMG/M
3300026557\|Ga0179587_10005261	All Organisms → cellular organisms → Bacteria	6457	Open in IMG/M
3300027643\|Ga0209076_1132777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300027643\|Ga0209076_1144931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300027645\|Ga0209117_1008532	All Organisms → cellular organisms → Bacteria → Acidobacteria	3489	Open in IMG/M
3300027660\|Ga0209736_1138104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300027671\|Ga0209588_1123383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300027846\|Ga0209180_10287202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300027846\|Ga0209180_10402160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300027862\|Ga0209701_10218393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300027875\|Ga0209283_10331680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300027910\|Ga0209583_10061471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1353	Open in IMG/M
3300028536\|Ga0137415_10111164	All Organisms → cellular organisms → Bacteria → Acidobacteria	2588	Open in IMG/M
3300028906\|Ga0308309_10167077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1785	Open in IMG/M
3300029636\|Ga0222749_10024838	All Organisms → cellular organisms → Bacteria → Acidobacteria	2503	Open in IMG/M
3300031057\|Ga0170834_104164176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300031128\|Ga0170823_15984622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300031754\|Ga0307475_10317865	All Organisms → cellular organisms → Bacteria → Acidobacteria	1250	Open in IMG/M
3300031754\|Ga0307475_10625727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300031820\|Ga0307473_10753787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300031962\|Ga0307479_10001563	All Organisms → cellular organisms → Bacteria	20930	Open in IMG/M
3300031962\|Ga0307479_10477550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300032180\|Ga0307471_100004123	All Organisms → cellular organisms → Bacteria	8842	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.32%
Host-Associated	Host-Associated	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.97%
Aquatic	Environmental → Aquatic	1.35%
Plants	Host-Associated → Plants	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.97%
Sediment	Environmental → Aquatic → Sediment	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.22%
Loam	Environmental → Terrestrial → Soil → Loam	6.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	47.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.03%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1017507241	3300002245	Forest Soil	MLLRPLSEPAKGLLRACREPGCLVRYLSLDGYFIDPKVAKTIDQEITPRVSCPNDGRLMYLAEVMPQRRSFRLWKCPECNGSRT
JGI25382J43887_101381741	3300002908	Grasslands Soil	SEMLPRLLREPAEGPLYACREPGCLLRYNSSHGYFIDTKDTKTIEEEKPPRVNCPNDGQLMYLAEVMPQRRSFRLWKCPECNESRTNEETSGELEKNVGA*
Ga0058897_111457471	3300004139	Forest Soil	MLLRLLSEPADGLVYACQEAGCLVRYDSSHGYFLDTKDAKAIEQETTPHVSCSNDGHLMYLAEVMPERRSFRRWKCPECELSKINDEETSGELGKKMGA*
Ga0066674_1000019514	3300005166	Soil	LGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLAEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0066672_100024503	3300005167	Soil	MLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0066672_106582532	3300005167	Soil	MVLRLLSEPAERRLYACREPDCVIRYDGPQGYFLDAGDAKTNDLELIPRVSCINDGQRMYLAEVTPEKRNFRLWKCPECSQTWINNENTSGELGKEAGA*
Ga0066680_103231711	3300005174	Soil	MLLRLLREPAEGPLYACREPGCLVRYNSSHGYFIDTEDAKTIEEEKPPRVNCPNDGQLMYLVEVMPQRRSFRLWKCPECNESRTNGETSGELEKNVGA*
Ga0066678_100022579	3300005181	Soil	VLCYQHHTEMLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0066682_100332055	3300005450	Soil	LGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0066681_100040846	3300005451	Soil	MLLGLVSEPAEGVLYACQEPGCLIRYDAARGYFLDTEDLKTIELEIMPRVNCRSDGQPMYLAHVNPEKSSFRLWKCPACDQSRNNEETSDGLGKKMGA*
Ga0066681_100256535	3300005451	Soil	VLCYQHHTEMLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLAEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0066661_105054121	3300005554	Soil	MLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLAEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0066691_100439533	3300005586	Soil	YACQEPGCLIRYDGSRGYFIDTKDANILGVEVTPRVNCSNDGQHMYLAEVTPERRNFRLWKCPECDQSCLNNEDTSPGLGKEMGA*
Ga0070766_105647261	3300005921	Soil	MLLRLLSEPAEGMLYACREPGCLIRYNVSHGYFLDTKDAETVELEIIPRVTCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA*
Ga0075023_1003509701	3300006041	Watersheds	MLLRLLSEPAEGLVHACQEAGCLVRYDSSHGYFLDSKDAKTIEQETTPHLSCSNDGQLMYLAEVMPERRSYRRWKCPECKLSYINDGESSGELGKKRGA*
Ga0070716_1000004902	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLPRVLDEPAESLLYACKEPGCLIRYAGPRGYFLDTEDAQTIEMELIPRVNCSNDGYRMYLAEVLPEKRNYRLWQCPECNQACVNDEETSGGLGKKMGA*
Ga0070765_1000112876	3300006176	Soil	MLLRLLSEPAEGMLYACREPGCLIRYNVSHGYFLDTKDAETVELEIIPRVSCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA*
Ga0079222_101145182	3300006755	Agricultural Soil	VLCYQHHTEMFLGLSNDPEEALPYACQEPGCLIRYSGPRGYFLDTKDANIIGAEITPRVKCSNDGQRMYLAEVTPERTNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0066658_100847202	3300006794	Soil	VLCYQHHTEMLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLAEVTPERINFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0079220_108459711	3300006806	Agricultural Soil	EMLLKLVSQPAERSFYACREPGCLVRYTDSDGYFLDTKEAKIIEQETTPRVTCPNDGQLMYLAAVAPEKRSYRLWKCPQCNSSLANEDASSGRGKSAEA*
Ga0075435_1005191953	3300007076	Populus Rhizosphere	MYRILLSEPAERVLYACQEPGCLIRYDASRGYFLETEDLKTIELEIMPRVNCPNDGHHMHLTQVNPERSSFRLWKCPECNQSRSNEEASGERGKKMGA*
Ga0099791_100692692	3300007255	Vadose Zone Soil	MLLRLLSQPAEGLVYACHEPGCLVRYDSSHGYFLDTKDAETIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKERGA*
Ga0099791_101776731	3300007255	Vadose Zone Soil	EMLLRLLSEPAEGLPYACREPSCLVRYHSLDGYFIDPKVAKTIDQETSPRVNCPNDGQFMYLAEVMPQRSFRLWKCPECNGSRTNEETSGGLGKKMGA*
Ga0099793_100660252	3300007258	Vadose Zone Soil	MLHVLCYQHHLEMLLSSPAVPVGEPVYACQEPTCLVTYNASDGYSLNTKDAKTIEEENPPRVSCPEDGQLMYLAEVSPQKTSFRLWKCPECDQSRSNEDTSGGLGKKMGA*
Ga0099794_104657551	3300007265	Vadose Zone Soil	EMLLRLLSEPAEGLPYACREPSCLVRYRSLDGYFIDPKVAKTIDQETMPRVNCPNDGQFMYLAEVMPQRSFRLWKCPECNGSRTNEETSGGLGKKMGA*
Ga0099829_104537572	3300009038	Vadose Zone Soil	MLLRRLSENAEKLPYACQEPGCLVRYDSPHGYFIDAEDAETIEQETTPHVSCSNDGQLMYLAEVMPERRSFRLWKCPECDLSCINDEETSGGLGKKMGA*
Ga0099829_111070771	3300009038	Vadose Zone Soil	MLLRLLSESAERMLYACQEPGCLIRYDISDGYFLDTNDAKTIELEIIPRVNCSNDGRRMYLAEVMPERRSFRLWKCPECNQSCINNEETS
Ga0099829_112976211	3300009038	Vadose Zone Soil	MPYACQEPGCLIRYDISNGYFLDTNDAKTIELEIIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNQSCINNEETSGGLGKKM
Ga0099830_104650781	3300009088	Vadose Zone Soil	MLLRRLSENAEKLPYACQEPGCLVRYDSPHGYFIDTEDAETIEQETTPHVSCSNDGQLMYLAEVMPERRSFRLWKCPECDLSCINDEETSCGLGKKMGA*
Ga0099828_100166288	3300009089	Vadose Zone Soil	MLLRRLSENAEKLPYACQEPGCLVRYDSPHGYFIDTEDAETIEQETTPHVSCSNDGQLMYLAEVMPERRSFRLWKCPECDLSCINDEETSGGLGKKMGA*
Ga0099828_101549103	3300009089	Vadose Zone Soil	MPYACQEPGCLIRYDILNGYFLDTNDAKTIELEVIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNQSCINNEETSGGLGKKMGA*
Ga0099827_100688293	3300009090	Vadose Zone Soil	MPYACQEPGCLIRYDILNGYFLDTNDAKTIELEIIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNRSCINNEETSGGLGKKMGA*
Ga0099827_104593361	3300009090	Vadose Zone Soil	MPLRPHSETAEGMLYACQEPGCLIRYRISPGYFLDAKDAKTVELEIIPHISCSNDAQLMYLAQVMPERKSFRLWKCPECNASQTNEEISDGLGKKMRA*
Ga0066709_1000069896	3300009137	Grasslands Soil	MLLGLVSEPAEGVLYACQEPGCLIRYDAARGYFLDTEDLKTIELEIMPRVNCRSDGQPMYLAQVNPEKSSFRLWKCPACDQSRNNEETSDGLGKKMGA*
Ga0066709_1010107061	3300009137	Grasslands Soil	LLREPAEGPLYACREPGCLVRYNSSHGYFIDTEDAKTIEEEKPPRVNCPNDGQLMYLVEVMPQRRSFRLWKCPECNESRTNGETSGELEKNVGA*
Ga0134064_100566322	3300010325	Grasslands Soil	MLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDRNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0134064_100980451	3300010325	Grasslands Soil	EDLRYACQEPGCLIRYDGSRGYFIETKDANILGVEVTPRVNCSNDGQHMYLAEVTPERRNFRLWKCPECSQSCLNNEDTSPGLGKEMGA*
Ga0134080_103676562	3300010333	Grasslands Soil	EPGCLIRYDAARGYFLDTEDLKTIELEIMPRVNCRSDGQPMYLAHVNPEKSSFRLWKCPACDQSRNNEETSDGLGKKMGA*
Ga0150983_164144261	3300011120	Forest Soil	MLLRLLSEPAEGMLYACREPGCLIRYDVSHGYFLDAKDAGTVELEIIPRVSCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA*
Ga0137392_103286103	3300011269	Vadose Zone Soil	MLLRLLSQPAEGLVYACYEPGCLVRYDSSHGYFLDTKDAETIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKERGA*
Ga0137391_100703964	3300011270	Vadose Zone Soil	MPYACQEPGCLIRYDISNGYFLDTNDAKTIELEIIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPDCNQSCINNEETSGGLGKKMGA*
Ga0137391_100977742	3300011270	Vadose Zone Soil	MLLRLLSEPAEGLVYACQEPGCLVRYDSPHGYFLDTKDAKTIEQETTPHVSCSNDGQLMYLAEVTTERRSFRLWKCPECNLSRINEETSGGLGKEMGA*
Ga0137393_101001862	3300011271	Vadose Zone Soil	MPYACQEPGCLIRYDISNGYFLDTNDAKTIELEIIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNQSCINNEETSGGLGKRMGA*
Ga0137393_101452453	3300011271	Vadose Zone Soil	MLLRLLSEPAERLVYACHEPGCLVRYDSSHGYFLDTKDAKTIERETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKERGA*
Ga0137389_105669832	3300012096	Vadose Zone Soil	MLLRLLSQPAEGLVYACYEPGCLVRYDSSHGYFLDTKDAETIEQETTPHVSCSNDGQLMYLAEVSPQRRSFRLWKCPECNLSYINDEESSGGLGK
Ga0137389_107689221	3300012096	Vadose Zone Soil	MPYACQEPGCLIRYDILNGYFLDTNDAKTIELEIIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNQSCINNEETSGGLGKRMGA*
Ga0137389_117025462	3300012096	Vadose Zone Soil	YACHEPGCLVRYDSSHGYFLDTKDAKTIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKEMGA*
Ga0137388_100391063	3300012189	Vadose Zone Soil	MLLRLVSQPAERSLYACREPGCLVRYTDSDGYFVDTKEVKIIEQETTPRVTCPDDGQLMYLAAVTPEKRSFRLWKCPQCDSSHTNEETSGGLGKGAEA*
Ga0137388_101811893	3300012189	Vadose Zone Soil	MPYACQEPGCLIRYDILNGYFLDTNNAKTIELEVIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNRSCINNEETSGGLGKKMGA*
Ga0137383_108494351	3300012199	Vadose Zone Soil	MPLRPLSGAAEDVLYACQVPGCLIRYDMARGYFLDTEDLKTIELEIRPRVRCSKDGHYMYLAQVMPERSSFRQWKCPECDETRNNEESSAGL
Ga0137363_100547153	3300012202	Vadose Zone Soil	MLLRLLSEPAEGLVYACQEPGCLVRYESPHGYFLDTKDAKTIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKEMGA*
Ga0137363_100945553	3300012202	Vadose Zone Soil	MLLAPPTESAEGTLYACHELGCLIRYFVSSGYFLDMKDAKAAELEIIPRVACSKDAQRMYLAEVMPGRKSFRLWKCPQCDARKTNEEITGGLGKKIGA*
Ga0137399_100005066	3300012203	Vadose Zone Soil	MLLAPPTESAEGTSYACHEPGCLIRYFVSSGYFLDMKDAKAAELEIIPRVACSKDAQRMYLAEVMPGRKSFRLWKCPQCDARKTNEEITGGLGKKIGA*
Ga0137399_114884162	3300012203	Vadose Zone Soil	RVLDESAERLLYACKEPGCLIRYAGPQGYFLDTEDAKTIEMELIPRVNCSNDGHRMYLAEVLPQRRNYRLWQCPECNQGRANDEENSGGLGKKIGA*
Ga0137362_101561951	3300012205	Vadose Zone Soil	MLLRLLSEPAEGLLYPCREPSCLVRYHSLDGYFIDPKVAKTIDQEISPRVNCPNDGQFMYLAEVMPQRRSFRLWKCPECNGSRTNEET
Ga0137362_101890042	3300012205	Vadose Zone Soil	MLLAPPAGPVAGLLYACREPSCLVRYNAFDGYSIDTKDAKTIEEEKPPRVNCPNEGQLMYLAGVSPQNSSFRLWKCPECLQSRTNEDISGELGKKMGA*
Ga0137380_101997631	3300012206	Vadose Zone Soil	VLYACQVPGCLIRYDMARGYFLDTEDLKTIELEILPRVRCSKDGHYMYLAQVMPERSSFRQWKCPECDETRNNEESSAGLGKKMGA*
Ga0137370_103655172	3300012285	Vadose Zone Soil	MFVRPASEAAEDIRYACQEPGCLIRYDGSRGYFLDSKDANILGVEVTPRVNCSNDGQHMYLAEVTPERRNFRLWKCPECDQGCINDEDTLGELGKKMGA*
Ga0137384_102471563	3300012357	Vadose Zone Soil	MPLRPLSGAAEDVLYACQVPGCLIRYDMARGYFLDTEDLKTIELEIRPRVSCPNDGHQMYLGQVNPERSSFRLWKCPECNQSRTNEEASGGTGKKMGA*
Ga0137360_1000538012	3300012361	Vadose Zone Soil	MLLRLLSEPAEGLVYACQEPGCLVRYESPHGYFLDTKDAKTIEQETTPHVSCSNDEQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKEMGA*
Ga0137361_100649292	3300012362	Vadose Zone Soil	MLLRLLSEPAEWPAYACQESGCLVRYDRALGYSLDTEDAKTIEQETTPHVNCSNDGRLMYLAEISPKRRSFRLWKCPECNLSRINDNDEESSGGLGKKMGA*
Ga0137390_104252362	3300012363	Vadose Zone Soil	MPYACQEPGCLIRYDILNGYFLDTNDAKTIELEIIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNRSCINNEETSGGLEKKMGA*
Ga0137390_113328951	3300012363	Vadose Zone Soil	MYACREPGCLVCYDSSAGYFIDTEDAKTIKQETTPHVSCSNDGQLMYLAEVSPQRRSFRLWKCPECNLSYINDEESSGGLGKQIGA*
Ga0134049_10278951	3300012403	Grasslands Soil	MLFGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA*
Ga0137358_100449791	3300012582	Vadose Zone Soil	MLLRLLSSEPAEGLLYACREPGCLVRYHSLDGYFIDPKVAKTIDQEITPRVSCPDDGRLMYLAEVMPQRRSFRLWKCPECNGSRTNEETSGGLGKKMGA*
Ga0137358_101194941	3300012582	Vadose Zone Soil	VLCYQHHTEMFVRPAGEAAEDLRYACQEPGCLIRYDGSRGYFLDTKDTNILGVEVTPRVNCSNDALHMYLAEVAPERRSYRLWKCPECDQSCINNEDTLGELGKKMGA*
Ga0137358_109303781	3300012582	Vadose Zone Soil	MLLRLLSEPAEGLLYACQEPGCLVRYHSLDGYFIDPKVAKTIDQEITPRVSCPDDGHFMYLAEVMPQRRSFRLWKCTECNESRTNEETSGRLEKKMG
Ga0137397_100010049	3300012685	Vadose Zone Soil	MLHVLCYQHHLEMLLSSPAVPVGEPVYACQEPTCLVRYNASDGYSLNTKDAKTIEEENPPRVSCPEDGQLMYLAEVSPQKTSFRLWKCPECDQSRSNEDTSGGLGKKMGA*
Ga0137395_100823842	3300012917	Vadose Zone Soil	MLYACQEPGCLIRYRISPGYFLDAKDAKTVELEIIPRISCSNDAQLMYLAQVMPERKSFRLWKCPECNASQTNEEISDGLGKKMGA*
Ga0137395_111730971	3300012917	Vadose Zone Soil	MLLRLLSEPAEWPAYACQESGCLVRYDRALGYSLDTEDAKTIEQETTPHVNCSNDGRLMYLAEISPKRRSFRLWKCPECNLSRINDNDEESS
Ga0137396_100246141	3300012918	Vadose Zone Soil	TEMLLRLSSESVMWPLYSCQAPDCLIRYDSSQGYFIEAIDPKTLEEEKTPRVICPTDGQLMYLAEVSPQRRSFRLWKCPECNGSCTNEESSGGLEKKMGA*
Ga0137394_100263372	3300012922	Vadose Zone Soil	MLLRLLSEPAEGLLYACQEPGCLVRYHSLDGYFIDPKVAKTIDQEITPRVSCPDDGHFMYLAEVMPQRRSFRLWKCPECNESRTNEETSGGLKKKMGA*
Ga0137394_112968992	3300012922	Vadose Zone Soil	LYACREPGCLVRYHSLDGYFIDPKVAKTIDQEITPRVSCPDDGHFMYLAEVMPQRRSFRLWKCPECNGSRTNEETSGGLGKKMGA*
Ga0137359_107270972	3300012923	Vadose Zone Soil	MFVRPASKAAEDLRYACQEPGCLIRYDGSRGYFLDTEDANILGVEVTPRVNCSNDALHMYLAEVAPERRSYRLWKCPECDQSCINNEDTLGELGKKMGA*
Ga0137359_111371181	3300012923	Vadose Zone Soil	MLLGPPTDSAEGTLYACHEPGCLIRYFVSSGYFLDTKDAKAAELEIIPRVSCSNDAQRMYLAEVMPGRKSFRLWKCPQCDARKTNEEITGGLGKK
Ga0137419_115076391	3300012925	Vadose Zone Soil	SSPTGPTGGLPYACQEPSCLVRYSALDGYSIDTKDPKTIEEERPPRVNCPDDGQLMYLAEVNAQNISFRLWKCPECQQSRTNEDTSGGLGKKMGA*
Ga0137419_118092582	3300012925	Vadose Zone Soil	MLLAPPTESAEGTSYACHEPGCLIRYFVSSGYFLDMKDAKAAEREIIPRVACSKDAQRMYLAEVMPGRKSFRLWKCPQCDARKTNEEITGGLGKKIGA*
Ga0137419_119238411	3300012925	Vadose Zone Soil	MLLGSPTDSAEGTLYACHEPGCLIRYFVSSGYFLDTKDAKAAELEIIPRVSCSNDAQRMYLAEVMPGRKSFRLWKCPQCDARKTNEEITGGL
Ga0137416_103680921	3300012927	Vadose Zone Soil	MLLGSPTDSAEGTLYACHEPGCLIRYFVSSGYFLDTKDAKAAELEIIPRVSCSNDAQRMYLAEVMPGRKSFRLWKCPQCDARKTNEEITGGLGKKIGA*
Ga0137404_100780083	3300012929	Vadose Zone Soil	MLLRLLSEPAEGLPYACREPSCLVRYRSLDGYFIDPKVAKTIDQETMPRVNCPNDGQFMYLAEVMPQRSFRLWKCPECNGSRTNEETSGGLGKKMGA*
Ga0137410_100443663	3300012944	Vadose Zone Soil	MLHVLCYQHHLEMLLSSPAVPVGEPVYACHEPTCLVRYNASDGYSLNTKDAKTIEEENPPRVSCPEDGQLMYLAEVSPQKTSFRLWKCPECDQSRSNEDTSGGLGKKMGA*
Ga0137410_120551951	3300012944	Vadose Zone Soil	MLLRLLSEPAEGLPYACREPSCLVRYRSLDGYFIDPKVAKTIDQETMPRVNCPNDGQFMYLAEVMPQRSFRLWKCPECNGSRTNEET
Ga0134079_100582001	3300014166	Grasslands Soil	HHKEMLLGLVSEPAEGVLYACQEPGCLIRYDAARGYFLDTEDLKTIELEIMPRVNCRSDGQPMYLAQVNPEKSSFRLWKCPACDQSRNNEETSDGLGKKMGA*
Ga0137420_11761676	3300015054	Vadose Zone Soil	MLLSSPAVPVGEPVYACQEPTCLVTYNASDGYSLNTKDAKTIEEENPPRVSCPEDGQLMYLAEVSPQKTSFRLWKCPECDQSRSNEDTSGGLGKKMGA*
Ga0137418_104589131	3300015241	Vadose Zone Soil	HHTEMLLAPPAGPVAGLLYACREPSCLVRYHALDGYSIDTKDPKTIEEERPPRVNCPDDGQLMYLAEVNAQNISFRLWKCPECQQSRTNEDTSGGLGKKMGA*
Ga0137418_105899611	3300015241	Vadose Zone Soil	MFVRPAGEAAEDLRYACQEPGCLIRYDGSRGYFLDTKDTNILGVEVTPRVNCSNDALHMYLAEVAPERRSYRLWKCPECDQSCINNEDTLGELGK
Ga0137403_105167282	3300015264	Vadose Zone Soil	MFVRPAGEAAEDLRYACQEPGCLIRYDGSRGYFLDTKDTNILGVEVTPRVNCSNDALHMYLAEVAPERRSYRLWKCPECDQSCINNEDTLGELGKKMGA*
Ga0134074_10002738	3300017657	Grasslands Soil	LGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA
Ga0066655_100007593	3300018431	Grasslands Soil	MLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA
Ga0066667_1000044310	3300018433	Grasslands Soil	VLCYQHHTEMLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLAEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA
Ga0179592_104267811	3300020199	Vadose Zone Soil	MLLGPPTDSAEGTLYACHEPGCLIRYFVSSGYFLDTKDAKAAELEIIPRVSCSNDAQRMYLAEVMPGRKSFRLWKCPQCDARKTNEEI
Ga0210407_100030555	3300020579	Soil	MLLRLLREPEEGVLYACREPGCLVRYDGSNGYFIDPNDAETVEQEITPRVNCPNDGQFMYLAEVMPQRRSFRLWKCLGCNESRTNEETSGGLEKKMGA
Ga0210407_100126476	3300020579	Soil	MLLRHLSKPAGGLVYACREAGCLVRYDSSHGYFLDTKDAKTIEQETTPHLSCSNDGQLMYLSEVMPERRSFRLWKCPECKLSYINDEETSGELGKKMGA
Ga0210403_101179371	3300020580	Soil	MLLRFLGEPAEGGLYACQEPGCLIRYDISHGYFLDTRDAETVELEIIPRVTCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA
Ga0210403_108980061	3300020580	Soil	TGGLLYACREPSCLVRYSALDGYSIDTKDTKTIEEERPPRVSCPNDGQLMYLAEVSPQDISFRLWKCPECHQSHTNNEDTSGGLGKKMGA
Ga0210399_1000173918	3300020581	Soil	MLLRLLSEPAEGMLYACREPGCLIRYDVSHGYFLDAKDAGTVELEIIPRVSCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA
Ga0210404_100116502	3300021088	Soil	MLYTCRQPGCLVRYDNSDGYFIDARDAKTIEQETTPRVTCPNDGHFMYLAEVMPQRRSFRLWKCPECNGTRTNKETSGGLGKKMGA
Ga0210404_104752601	3300021088	Soil	MLLSSPTVPVGELVYACLEPSCLVRYTALDGYSLDTKDAKTIEEERPPRVSCPDDGQLMHLAEVNPQNTSFRLWKCPECRRSLTNEDSSGGLEKKMGA
Ga0210406_112395472	3300021168	Soil	GPAYACQESGCLVRYDRARGYFLDTEDAMTVEQEMTPHVNCSNDGHLMYLAEVSPQRRSFRLWKCPECNLSRINDNDEESAGGLGKKMGA
Ga0210400_102175473	3300021170	Soil	MLLRPLRESAEGTLYACQEPGCLIRYDISQGYFLDTKDAKTIELEIIPHVCCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDASGELGKKMGA
Ga0210405_1000042010	3300021171	Soil	VPVGELVYACLEPSCLVRYTALDGYSLDTKDAKTIEEERPPRVSCPDDGQLMYLAEVNPQNTSFRLWKCPECRRSLTNEDSSGGLEKKMGA
Ga0210396_100177432	3300021180	Soil	MLLRLLSEPAEGMLYACREPGCLIRYNVSHGYFLDTKDAETVELEIIPRVTCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA
Ga0210388_100062683	3300021181	Soil	MLLRLLSESAEGVLYACQEPSCLVCYDSSDGYFIDTKNLKIIDEEIKPRVICPNDGHFMYLAEVTPQRRSFRLWKCPECNANRTNEETSGGLEKKMGA
Ga0210384_100209431	3300021432	Soil	YACREPGCLIRYNVSHGYFLDTKDAETVELEIIPRVTCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA
Ga0210391_102864341	3300021433	Soil	LLRLLSESAEGVLYACQEPSCLVCYDSSDGYFIDTKNLKIIDEEIKPRVICPNDGHFMYLAEVTPQRRSFRLWKCPECNANRTNEETSGGLEKKMGA
Ga0210410_100057583	3300021479	Soil	MLLRLLSEPAEGMLYACREPGCLIRYNVSHGYFLDTKDAETVELEIIPRVTCSNDAQRMYLAEVMPERRSFRLWKCPECNQSYINNEDTLGELGKKMGA
Ga0210409_100797052	3300021559	Soil	VPVGELVYACLEPSCLVRYTALDGYSLDTKDAKTIEEERPPRVNCPNDGQLMYLAEVSPQNISLRLWKCPECHQSRTNEDTSGGLGKKMGA
Ga0210409_114086282	3300021559	Soil	YACQEAGCLVRYDSSHGYFLDTKDAKTIEQETTPHLSCSNDGQLMYLSEVMPERRNFRRWKCPECKLTFINDEETSGGLGKKMGA
Ga0242677_10204291	3300022713	Soil	SEPAEGALYACQEPSCLVCYDSSDGYFIDTKNLKIIEEEIKPRVICPNDGHFMYLAEVMPQRRSFRLWKCPECNANRTNEETSGGLEKKMGA
Ga0242671_10439401	3300022714	Soil	LSESAEGVLYACQEPSCLVCYDSSDGYFIDTKNLKIIDEEIKPRVICPNDGHFMYLAEVMPQRRSFRLWKCPECNANRTNEETSGGLEKKMGA
Ga0247687_10706571	3300024286	Soil	LLGPPSETAEGMLFACREPGCLIRYGISPGYFLDAEDAKTVELEIIPRISCSNDAQPMYLAQVMPERKSFRLWKCPECNASQTNEDISDGLGKKMGA
Ga0137417_10622172	3300024330	Vadose Zone Soil	MLLSSPAVPVGEPVYACQEPTCLVTYNASDGYSLNTKDAKTIEEENPPRVSCPEDGQLMYLAEVSPQKTSFRLWKCPECDQSRSNEDTSGGLGKKMGA
Ga0207665_1000001592	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLPRVLDEPAESLLYACKEPGCLIRYAGPRGYFLDTEDAQTIEMELIPRVNCSNDGYRMYLAEVLPEKRNYRLWQCPECNQACVNDEETSGGLGKKMGA
Ga0209468_100011311	3300026306	Soil	VLCYQHHTEMLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA
Ga0209055_10447852	3300026309	Soil	MLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLAEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA
Ga0209239_11390151	3300026310	Grasslands Soil	MLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLAEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKM
Ga0209268_10434532	3300026314	Soil	MLLGLVSEPAEGVLYACQEPGCLIRYDAARGYFLDTEDLKTIELEIMPRVNCRSDGQPMYLAHVNPEKSSFRLWKCPACDQSRNNEETSDGLGKKMGA
Ga0209154_10895112	3300026317	Soil	MLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDTNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGL
Ga0209470_100268310	3300026324	Soil	VLCYQHHTEMLLGLSNDLEEALPYACQEPGCLIRYDGPRGYFLDTKDRNIIGAEITPRVNCSNDGQRMYLTEVTPERRNFRLWKCPECDQSYMNDEDTSAGLGKKMGA
Ga0209375_10183713	3300026329	Soil	MLLGLVSEPAEGVLYACQEPGCLIRYDAARGYFLDTEDLKTIELEIMPRVNCRSDGQPMYLAQVNPEKSSFRLWKCPACDQSRNNEETSDGLGKKMGA
Ga0209648_100274996	3300026551	Grasslands Soil	HTEMLLTPVSESPEGLLYACREPGCLVRYTDSDGYFIDTKDPKTVGEESTPRVSCPNDAQLMYLAEVTPQRRSYRLWKCPECNASHTNGETSDGLGKSAEA
Ga0209648_101473663	3300026551	Grasslands Soil	SEMLLRLLSEPAERLVYACHEPGCLVRYDSSHGYFLDTKDAKTIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEESSGGLGKEIGA
Ga0209648_101816591	3300026551	Grasslands Soil	MPYACQEPGCLIRYDILNGYFLDTNDAKTIELEIIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNQSCINNGETSGGLEKKMGA
Ga0209648_106738752	3300026551	Grasslands Soil	ACHEPGCLVRYDSSHGYFLDTKDAETIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSVGLGKERGA
Ga0209577_105077821	3300026552	Soil	TEMFVRPASEAAEDLRYACQEPGCLIRYDGSRGYFLDSKDTNILGVEVTPRVNCSNDGQHMYLAEVTPERRNFRLWKCPECSQSCLNNEDTSPGLGKEMGA
Ga0179593_10187313	3300026555	Vadose Zone Soil	VPVGEPVYACQEPTCLVTYNASDGYSLNTKDAKTIEEENPPRVSCPEDGQLMYLAEVSPQKTSFRLWKCPECDQSRSNEDTSGGLGKKMGA
Ga0179587_100052612	3300026557	Vadose Zone Soil	VLCYQHHTEMLVSSPTGPTGGLLYACQEPSCLVRYSALDGYSIDTKDPKTIEEERPPRVNCPDDGQLMYLAEVNAQNISFRLWKCPECQQSRTNEDTSGGLGKKMGA
Ga0209076_11327771	3300027643	Vadose Zone Soil	VAGLLYACREPSCLVRYNALDGYSIDTKDAKTIEEEKPPRVNCPNDGQLMYLAGVSPQNSSFRLWKCPECLQSRTNEDISGGLEKKMGA
Ga0209076_11449311	3300027643	Vadose Zone Soil	MLHVLCYQHHLEMLLSSPAVPVGEPVYACQEPTCLVTYNASDGYSLNTKDAKTIEEENPPRVSCPEDGQLMYLAEVSPQKTSFRLWKCPECDQSRSNEDTSGGLGKKMGA
Ga0209117_10085321	3300027645	Forest Soil	CQEAGCLVRYDSSHGYFLDTKDAKTIEQETTPHLGCSNDGQLMYLAEVMPERRSFRRWKCPECNLSYINDEETSGGLGKKMGA
Ga0209736_11381041	3300027660	Forest Soil	MLLRLLSEPAEGLYACQEPGCLIRYDISHGYFLDTKDAETVELEIIPRVTCSNDAQRMYLAEIMLERRSFRLWKCPECNQSCINNEDTLGGLGKKMGA
Ga0209588_11233831	3300027671	Vadose Zone Soil	MLPAPPTGPVAGLLYACREPSCLVRYNALDGYSIDTKDAKTIEEEKPPRVNCPNDGQLMYLAGVSPQNSSFRLWKCPECPH
Ga0209180_102872022	3300027846	Vadose Zone Soil	MLLRRLSENAEKLPYACQEPGCLVRYDSPHGYFIDTEDAETIEQETTPHVSCSNDGQLMYLAEVMPERRSFRLWKCPECDLSCINDEETSCGLGKKMGA
Ga0209180_104021602	3300027846	Vadose Zone Soil	GLVYACHEPGCLVRYDSSHGYFLDTKDAKTIEQETTPHVSCSNDGQLMYLAEVTPERRSFRLWKCPECNLSRINEETSGGLGKEMGA
Ga0209701_102183931	3300027862	Vadose Zone Soil	MLLRRLSENAEKLPYACQEPGCLVRYDSPHGYFIDTEDAETIEQETTPHVSCSNDGQLMYLAEVMPERRSFRLWKCPECDLSCINDEETSGGLGKKMGA
Ga0209283_103316802	3300027875	Vadose Zone Soil	MSYACQEPGCLIRYDILNGYFLDTNDAKTIELEVIPRVNCSNDGQRLYLAEVMPERRSFRLWKCPECNQSCINNEETSGGLGKKMGA
Ga0209583_100614711	3300027910	Watersheds	VYSCQEAGCLVRYDSSHGYFLDTKDAQTIEQETTPHLSCSNDGHLMYLSEVMPERRSFRRWECPECKLSKINDEETSGGLGKKIGA
Ga0137415_101111644	3300028536	Vadose Zone Soil	MLPAPPTGPVAGLLYACREPSCLVRYNALDGYSIDTKDAKTIEEEKPPRVNCPNDGQLMYLAGVSPQNSSFRLWKCPECLQSRTNEDISGELGKKMGA
Ga0308309_101670771	3300028906	Soil	MLYACREPGCLIRYNVSHGYFLDTKDAETVELEIIPRVSCSNDAQRMYLAEVMPERRSFRLWKCPECNQSCINNEDTLGELGKKMGA
Ga0222749_100248381	3300029636	Soil	EMLLRLLSEPAEGLLYTCREPGCLVRYHSLDGYFIDSKVAKTIDQEITPRVSCPNDGRLMYLAEVMPQRRSFRLWKCPECNGSSTNEETSGGLEKKMGA
Ga0170834_1041641761	3300031057	Forest Soil	VEGLLYACREPGCLVRYNASAGYFIDTKGAKAIEHEMTPRVSCAHDGQLMYLAEVMPQKRSFRLWKCPECNRSRTNEETSGGLGKKMGA
Ga0170823_159846222	3300031128	Forest Soil	MLLGPPTESAEGMLYACQEPGCLIRYQASSGYFLDVKDARAVELEIIPRVSCYNDAQRMYLAEVLPEKKSFRLWKCPKCEARQTNEEISGGLGKKMGV
Ga0307475_103178651	3300031754	Hardwood Forest Soil	MLLRLLSEPVEGLVYACQEAGCLVRYDSSRGYFLGTKDAKTIEQETTPHVTCSNDGRLMYLAEVMPERRSFRQWKCPECELSKINDEEASGELGKKMGA
Ga0307475_106257272	3300031754	Hardwood Forest Soil	MVLELRSEPPEGLLYACQEPGCLVRYDTSCGYFLDTNDTKTIGLEIKPRVSCINDGYRMYLAEVMPERSSFRQWKCPECNERRTNEETLGG
Ga0307473_107537871	3300031820	Hardwood Forest Soil	EPGCLVRYDNSHGYFLDTKDAKTIAQETTPHVSCSNDGQLMYLAEVMAERRNFRLWKCPECNLSRINEETSGGLGKEMGA
Ga0307479_1000156320	3300031962	Hardwood Forest Soil	MLLRLLSEPAEGLLYACREPGCQVRYHSLDGYFIDPKVAKTIDQEITPRVSCPNEGRLMYLAEVMPQRKSFRLWKCPECNGSRTNEETSAGLEKEMGA
Ga0307479_104775501	3300031962	Hardwood Forest Soil	TGGLLYACREPSCLVRYGGLDGYSIDAKDAKTIEEERPPRVNCPNDGQLMYLAEVSPQNISFRLWKCPECHQSRTNEDTLGGLGKKMGA
Ga0307471_1000041236	3300032180	Hardwood Forest Soil	MVLELRSEPPESLLYACQQPGCLVRYETSCGYFLDTNDTKTIRLEIIPRVSCFNDGYRMYLAEVMPERSSFRQWKCPECNERRTNEETLGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048529

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences