Metagenome / Metatranscriptome Family F048460

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048460
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	57 residues
Representative Sequence	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPR
Number of Associated Samples	111
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.13 %
% of genes near scaffold ends (potentially truncated)	18.92 %
% of genes from short scaffolds (< 2000 bps)	84.46 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.541 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.324 % of family members)
Environment Ontology (ENVO)	Unclassified (37.838 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.919 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.10% β-sheet: 0.00% Coil/Unstructured: 61.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF09907	HigB_toxin	17.57
PF02452	PemK_toxin	11.49
PF04365	BrnT_toxin	6.76
PF10543	ORF6N	3.38
PF01909	NTP_transf_2	3.38
PF02661	Fic	2.03
PF01471	PG_binding_1	2.03
PF01192	RNA_pol_Rpb6	2.03
PF10049	DUF2283	1.35
PF06250	YhcG_C	0.68
PF00171	Aldedh	0.68
PF00701	DHDPS	0.68
PF09720	Unstab_antitox	0.68
PF05990	DUF900	0.68
PF13289	SIR2_2	0.68
PF00128	Alpha-amylase	0.68
PF00117	GATase	0.68
PF05168	HEPN	0.68
PF15919	HicB_lk_antitox	0.68
PF07681	DoxX	0.68
PF04055	Radical_SAM	0.68
PF05635	23S_rRNA_IVP	0.68
PF04255	DUF433	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	11.49
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	6.76
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	2.03
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.35
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.68
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.68
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.68
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.68
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.68
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.68
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.68
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.68
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.68
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.68
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.68
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.68
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.68
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.54 %
Unclassified	root	N/A	9.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.54 %
Unclassified	root	N/A	9.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.54 %
Unclassified	root	N/A	9.46 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	41.22 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	40.54 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	33.11 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.68 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.11 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.68 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.68 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.11 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.68 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	0.68 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.11 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.68 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	0.68 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	33.11 %
Unclassified	root	N/A	9.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
Candidatus Jettenia caeni	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia caeni	0.68 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	0.68 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16544666	Not Available	1084	Open in IMG/M
2170459002\|F0B48LX02FVIRJ	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100295867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300000956\|JGI10216J12902_116508012	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300002245\|JGIcombinedJ26739_101159154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300004156\|Ga0062589_101050059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	766	Open in IMG/M
3300004479\|Ga0062595_102330971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300005164\|Ga0066815_10066509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300005166\|Ga0066674_10020904	All Organisms → cellular organisms → Bacteria	2824	Open in IMG/M
3300005172\|Ga0066683_10210429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1202	Open in IMG/M
3300005174\|Ga0066680_10786311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300005175\|Ga0066673_10735355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300005176\|Ga0066679_10233733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1180	Open in IMG/M
3300005180\|Ga0066685_10045535	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia caeni	2799	Open in IMG/M
3300005180\|Ga0066685_10203577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1358	Open in IMG/M
3300005180\|Ga0066685_10537480	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005186\|Ga0066676_10021764	All Organisms → cellular organisms → Bacteria	3364	Open in IMG/M
3300005186\|Ga0066676_10275136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300005186\|Ga0066676_10659069	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300005293\|Ga0065715_10333925	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005435\|Ga0070714_101440318	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300005447\|Ga0066689_10770977	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005467\|Ga0070706_100053199	All Organisms → cellular organisms → Bacteria	3737	Open in IMG/M
3300005467\|Ga0070706_100135439	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300005467\|Ga0070706_100287470	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300005536\|Ga0070697_100202466	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300005536\|Ga0070697_100628327	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005552\|Ga0066701_10048199	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300005552\|Ga0066701_10316579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	967	Open in IMG/M
3300005557\|Ga0066704_10585939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300005560\|Ga0066670_10875676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300005576\|Ga0066708_10467643	Not Available	811	Open in IMG/M
3300005586\|Ga0066691_10289285	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300006028\|Ga0070717_10078719	All Organisms → cellular organisms → Bacteria	2763	Open in IMG/M
3300006028\|Ga0070717_10214894	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300006175\|Ga0070712_100648432	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300006796\|Ga0066665_10019714	All Organisms → cellular organisms → Bacteria	4196	Open in IMG/M
3300006800\|Ga0066660_10856579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	741	Open in IMG/M
3300006852\|Ga0075433_10412456	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300006854\|Ga0075425_101688709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300009012\|Ga0066710_100069755	All Organisms → cellular organisms → Bacteria	4501	Open in IMG/M
3300009012\|Ga0066710_101611620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	994	Open in IMG/M
3300009012\|Ga0066710_103894275	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009137\|Ga0066709_100760068	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300009137\|Ga0066709_102191212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300009137\|Ga0066709_102263045	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300010154\|Ga0127503_11109313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	700	Open in IMG/M
3300010304\|Ga0134088_10113715	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300010304\|Ga0134088_10302375	Not Available	773	Open in IMG/M
3300010304\|Ga0134088_10393609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300010323\|Ga0134086_10186787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769	Open in IMG/M
3300010335\|Ga0134063_10667233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300010337\|Ga0134062_10353055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300010361\|Ga0126378_12429515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300011003\|Ga0138514_100031202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1011	Open in IMG/M
3300011269\|Ga0137392_10795889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300011271\|Ga0137393_10286700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1401	Open in IMG/M
3300012199\|Ga0137383_10625736	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300012200\|Ga0137382_10204024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1359	Open in IMG/M
3300012200\|Ga0137382_10850611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300012201\|Ga0137365_10103178	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300012202\|Ga0137363_10400281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1143	Open in IMG/M
3300012202\|Ga0137363_10595715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300012204\|Ga0137374_10030242	All Organisms → cellular organisms → Bacteria → Proteobacteria	5935	Open in IMG/M
3300012205\|Ga0137362_11015054	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012206\|Ga0137380_10171119	All Organisms → cellular organisms → Bacteria → Proteobacteria	1978	Open in IMG/M
3300012206\|Ga0137380_10449340	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300012207\|Ga0137381_10487154	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300012207\|Ga0137381_10755817	Not Available	844	Open in IMG/M
3300012209\|Ga0137379_11586677	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012211\|Ga0137377_10445609	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	1233	Open in IMG/M
3300012350\|Ga0137372_10401042	Not Available	1039	Open in IMG/M
3300012354\|Ga0137366_10284259	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300012356\|Ga0137371_10194042	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300012358\|Ga0137368_10590571	Not Available	706	Open in IMG/M
3300012359\|Ga0137385_10224920	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300012359\|Ga0137385_10990825	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012361\|Ga0137360_10546291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300012362\|Ga0137361_10674408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	945	Open in IMG/M
3300012362\|Ga0137361_10837199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	836	Open in IMG/M
3300012363\|Ga0137390_11704332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300012532\|Ga0137373_10363626	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300012532\|Ga0137373_11306088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300012685\|Ga0137397_10910515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300012923\|Ga0137359_10066313	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300012923\|Ga0137359_10200783	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300012923\|Ga0137359_10607485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	959	Open in IMG/M
3300012923\|Ga0137359_10614337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	953	Open in IMG/M
3300012929\|Ga0137404_10223497	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300012955\|Ga0164298_10421463	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300012960\|Ga0164301_10141471	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300012960\|Ga0164301_11217013	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300012971\|Ga0126369_10472356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1307	Open in IMG/M
3300012972\|Ga0134077_10143878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	948	Open in IMG/M
3300015264\|Ga0137403_10028898	All Organisms → cellular organisms → Bacteria	5883	Open in IMG/M
3300015359\|Ga0134085_10540914	Not Available	536	Open in IMG/M
3300015372\|Ga0132256_101245563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	857	Open in IMG/M
3300015374\|Ga0132255_105208754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300017657\|Ga0134074_1148159	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300018000\|Ga0184604_10088509	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300018000\|Ga0184604_10373649	Not Available	508	Open in IMG/M
3300018054\|Ga0184621_10017950	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300018056\|Ga0184623_10202732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	912	Open in IMG/M
3300018433\|Ga0066667_12295202	Not Available	505	Open in IMG/M
3300018482\|Ga0066669_10014143	All Organisms → cellular organisms → Bacteria	4210	Open in IMG/M
3300018482\|Ga0066669_10327762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1259	Open in IMG/M
3300019868\|Ga0193720_1044504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300019877\|Ga0193722_1033622	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300019879\|Ga0193723_1031349	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300019879\|Ga0193723_1041290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1370	Open in IMG/M
3300019879\|Ga0193723_1055227	Not Available	1163	Open in IMG/M
3300019881\|Ga0193707_1144434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	670	Open in IMG/M
3300019885\|Ga0193747_1113581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300019886\|Ga0193727_1004046	All Organisms → cellular organisms → Bacteria	6017	Open in IMG/M
3300019888\|Ga0193751_1001895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13040	Open in IMG/M
3300019888\|Ga0193751_1056970	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300020004\|Ga0193755_1025007	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300020004\|Ga0193755_1079970	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300020006\|Ga0193735_1077614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300020018\|Ga0193721_1007955	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300020579\|Ga0210407_10395021	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300021080\|Ga0210382_10029090	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300021411\|Ga0193709_1005797	All Organisms → cellular organisms → Bacteria	3158	Open in IMG/M
3300022534\|Ga0224452_1238342	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300025910\|Ga0207684_10169719	Not Available	1881	Open in IMG/M
3300025910\|Ga0207684_10239536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1565	Open in IMG/M
3300025910\|Ga0207684_10589504	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300025928\|Ga0207700_10835080	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300025939\|Ga0207665_11645542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300026296\|Ga0209235_1158976	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300026301\|Ga0209238_1216458	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300026324\|Ga0209470_1356621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300026528\|Ga0209378_1304453	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300026537\|Ga0209157_1213644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300026537\|Ga0209157_1329613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300026538\|Ga0209056_10162627	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300027537\|Ga0209419_1077579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300027655\|Ga0209388_1069613	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300028814\|Ga0307302_10671049	Not Available	515	Open in IMG/M
3300028819\|Ga0307296_10147506	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300028878\|Ga0307278_10000123	All Organisms → cellular organisms → Bacteria	38078	Open in IMG/M
3300031231\|Ga0170824_110693953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	707	Open in IMG/M
3300031231\|Ga0170824_118439522	Not Available	717	Open in IMG/M
3300031474\|Ga0170818_106242595	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1772	Open in IMG/M
3300031716\|Ga0310813_10077816	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300032180\|Ga0307471_100465546	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300032180\|Ga0307471_100915522	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.62%
Host-Associated	Host-Associated	3.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.89%
Aquatic	Environmental → Aquatic	4.73%
Plants	Host-Associated → Plants	3.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.22%
Sediment	Environmental → Aquatic → Sediment	3.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.03%
Freshwater	Environmental → Aquatic → Freshwater	1.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.35%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.73%
Loam	Environmental → Terrestrial → Soil → Loam	11.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.35%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.35%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01358310	2088090014	Soil	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRCAIGQQQQIREWERSV
E1_02828060	2170459002	Grass Soil	MKSKFAQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGHEQQIREWERSV
INPhiseqgaiiFebDRAFT_1002958672	3300000364	Soil	MKSKFTQRRYRAPKRSSCAMCKPQKQGWADKKTFADVRRAVAHEQQIRDWEQAVGLTVSRYENENDSKKI*
JGI10216J12902_1165080122	3300000956	Soil	LKSKFTQRRYRASKRAACGLCKPHQGGWADKKTQCDLRRVIGQEQQVRDWEKESVEADR*
JGIcombinedJ26739_1011591543	3300002245	Forest Soil	LKTRFTQRRYRAPKRRACGLCKPQKQGWDDKKTFIDLRRAVADEQEIREWEQGAGLELGDFRQ*
Ga0062589_1010500592	3300004156	Soil	MKSKFTQRRYRAPKQRACGLCKPQKQGWADKKTFTDVRRAVADEHQIRDWEAASGLTADDFR*
Ga0062595_1023309711	3300004479	Soil	MKSKFTQRRYRAPKRSACALCKPHQQGWADKKVFTDVRRAVADEHQLRDWEAAAGSTAALKSVKER
Ga0066815_100665092	3300005164	Soil	DFGETDAIASMKSKFTQRRYRASKQRACGLCKPQRQGWADKKTFADVRQAVAHEQEVRDWEQAARLGGEDFC*
Ga0066674_100209041	3300005166	Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAVAHEQEIRDW
Ga0066683_102104291	3300005172	Soil	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFNDLRRAVAQEQQIRELERAFPR*
Ga0066680_107863111	3300005174	Soil	MKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFTDVRRAVADEHQLRDWEAAAGSTADDSG*
Ga0066673_107353551	3300005175	Soil	QRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAVAHEQEIRDWHEGAGFEPEDYR*
Ga0066679_102337333	3300005176	Soil	LKSKFIQRRYRAPKRSACGLCKPQKRGWADKKTPADLRRAIGQEQQIRDCNDLSAR*
Ga0066685_100455354	3300005180	Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAVAHEQEIRDWHEGAGFEPEDYR*
Ga0066685_102035774	3300005180	Soil	MKSKLTQRRYRAPKRSACGLCKPQQRGWADKKTPADLRRAIGQEQQIEEWQRSL*
Ga0066685_105374803	3300005180	Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPADMRRAIAQEQQVREWERAFPR*
Ga0066676_100217644	3300005186	Soil	MKTKFTQRRYRAPKRSSCAMCKPQKQGWADKKTFADVRQAVAHEQEIRDWEQAAGLKPEDFRQ*
Ga0066676_102751361	3300005186	Soil	QRRYRAPKRSACALCKPHQQGRADKKTFADVRRAIADEHQIRDWEQQPD*
Ga0066676_106590692	3300005186	Soil	VKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPR*
Ga0065715_103339253	3300005293	Miscanthus Rhizosphere	ARARANRVIAPMKSKFTQRRYRAPKRSACGLCKPHQQGWADKKTFADVRRGVAHEQQVRD
Ga0070714_1014403182	3300005435	Agricultural Soil	MKSKFTQRRYRAPKRSACGLCKPQKQGWADKKTFADVRRAVAHEQQMREWERACSH*
Ga0066689_107709771	3300005447	Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREW
Ga0070706_1000531992	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKLTQRRYRAPKPSACGLCKPQKRGWADKKTVAGLRRAVGQEQQIRDWERLPAI*
Ga0070706_1001354394	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKMTQRRYRAPKRSACGLCKPQKRGWADKKTVAGLPRAVGQEQQIRDWQRSF*
Ga0070706_1002874704	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKVIQRRYRASKRSACGLCKPQQRGWADKKTPADLRRAIGQEQQIQEWVRSS*
Ga0070697_1002024663	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAHEQEVRDWEKESVRAER*
Ga0070697_1006283271	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKLTQRRYRAPKRSACGLCKPQKRGWADKKTVADLRRAVGQEQQIRDWERLPAI*
Ga0066701_100481993	3300005552	Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPT*
Ga0066701_103165792	3300005552	Soil	LKSKFTQRRYRARKRSACGLCKPQKRGWDDKKTFNDLRRAVAQEQQIRELERAFPR*
Ga0066661_107093001	3300005554	Soil	RAPKRSACAMCKPQQRGWADKKTPGDLRRVIPQEQQIREWERAFPT*
Ga0066704_105859392	3300005557	Soil	LKSKFTQRRYRAPKRSACGLCKPQKRGWADKKTPADLRRAIGQEQQIRDCNDLSAR*
Ga0066670_108756762	3300005560	Soil	LKSKFTQRRYRAPKRSACGLCKPQKRGWANRKTPADLRRAIGQEQQIRDCNDLSAR*
Ga0066708_104676432	3300005576	Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPADLRRAIAQEQQVRELERAFPR*
Ga0066691_102892853	3300005586	Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIPQEQQIREWERAFPT*
Ga0070717_100787196	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKLTQRLYRAPKRSACGLCKPQKRGWADKKTVADLRRAVGQEQQIRDWERLPAI*
Ga0070717_102148943	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKFTQRRYRGPKRSACGLCKPQKQGWADKKTFADVRRAVAHEQQMREWERACSH*
Ga0070712_1006484323	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKFTQRRYRAPKKSSCGLCKPQKRGWDDKKTFNDLRRAIGQEQQIREWERSL*
Ga0066665_100197145	3300006796	Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPR*
Ga0066660_108565792	3300006800	Soil	MKSKFIQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAQEQQVREWERSL*
Ga0075433_104124562	3300006852	Populus Rhizosphere	LKSKFTQRRYRAPKGSVCGLCKPQKQGWADKKTFADVRRAVAHEQQIRDWEQAVGLTVSRYENENDSKKI*
Ga0075425_1016887091	3300006854	Populus Rhizosphere	YRAPKGSACGLCKPQKQGWADKKTFADVRRAVAHEQQIRDWEQAVGLTVSRYENENEN*
Ga0066710_1000697557	3300009012	Grasslands Soil	YRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPR
Ga0066710_1016116202	3300009012	Grasslands Soil	MKSKLTQRRYRAPKRSACGLCKPQQRGWADKKTPADLRRAIGQEQQIEEWQRSL
Ga0066710_1038942752	3300009012	Grasslands Soil	YRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWKRAFPR
Ga0066709_1007600682	3300009137	Grasslands Soil	MKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAHEQQVRDWEKESVGVER*
Ga0066709_1021912122	3300009137	Grasslands Soil	LIKSKITQRRYRAPKRSACGLCQPQQRGSAEKKTTADLRRAIGQEQEMRDQERSSRL*
Ga0066709_1022630451	3300009137	Grasslands Soil	MKTKAIQRRYRAPKRSACGLSKSHQRGWADNKTPSDLRRAIAQQQQIREWS*
Ga0127503_111093132	3300010154	Soil	SMKSKFTQRRYRAPKHSSRAMCKPQQRGWADKKTPGDLRRAIAQEQQIRDWERAFPR*
Ga0134088_101137152	3300010304	Grasslands Soil	VKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPT*
Ga0134088_103023752	3300010304	Grasslands Soil	MKTKFTQRRYRAPKRSSCEMCKPQKICWADKKTFADVRQAVAHEQEIRDWEQAAGLKPEDFPQ*
Ga0134088_103936091	3300010304	Grasslands Soil	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAHEQQVCDWEKESVGADR*
Ga0134086_101867871	3300010323	Grasslands Soil	MKTKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAVAHEQEIRDWHEGAGFEPEDYR*
Ga0134063_106672332	3300010335	Grasslands Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAVAHEQEIRDCEQGATDH*
Ga0134062_103530551	3300010337	Grasslands Soil	PPMKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAVAHEQEIRDWHEGAGFEPEDYR*
Ga0126378_124295151	3300010361	Tropical Forest Soil	LKSKFTQRRYRARKRSACALCKPHQQGWADKKTFADVRRAVAYEQQVRDWEQGITASDF*
Ga0138514_1000312023	3300011003	Soil	MKSRFTQRRYRAPKQRACGLCKPQKQGWADKKTFADVRQAVTHEQEVRDWEGDVGLEPEDSSQ*
Ga0137392_107958892	3300011269	Vadose Zone Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAIAQEQQIREWQRAFPR*
Ga0137393_102867002	3300011271	Vadose Zone Soil	MKSKMTQRRYRAPKRSACGLCKPQQRGWADKKTVAYLRRVVGHEQQMRELGTLRPRSDV*
Ga0137383_106257361	3300012199	Vadose Zone Soil	FTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPT*
Ga0137382_102040241	3300012200	Vadose Zone Soil	MKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAQEQQVREWERSL*
Ga0137382_108506112	3300012200	Vadose Zone Soil	MKSKLIQRRYRAPKRSACTLCKPQQRGWADKKTPADLRHAIGDEQAMAEWILDERNQSC*
Ga0137365_101031784	3300012201	Vadose Zone Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAIGQEQQIREWERPLSPLPAAS*
Ga0137363_104002812	3300012202	Vadose Zone Soil	MKTKFTQRRYRAPKRSACALCKPHQQGWADKKTFGDVRRAVADEHQLRDWEAAVGLTADDSG*
Ga0137363_105957152	3300012202	Vadose Zone Soil	MKSKFTQRRYRAPKRLSCAMCKPQQRGWADKKTPGDLRRATGHEQQIREWERSLSSPLATP*
Ga0137374_100302424	3300012204	Vadose Zone Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAIGQEQQIREWERAFPR*
Ga0137362_110150543	3300012205	Vadose Zone Soil	MKTKFTQRRYRAPKRSACALCKPHQQGWADKKTFSDVRRAVADEHQLRDWEAAVGLTADDSG*
Ga0137380_101711195	3300012206	Vadose Zone Soil	LLPLKSKFTQRRYRARKRSACALCKPHQQGWADKKTFTDVRRAVADEHQIRDWQAAAGLTADDSG*
Ga0137380_104493402	3300012206	Vadose Zone Soil	MKSKFTQRRYRAPKRSDCAMFKPQQRGRADKKTPGDLRRVIAQEQQIREWERAFPT*
Ga0137381_104871543	3300012207	Vadose Zone Soil	LKTRFTQRRYRAPKRRACGLCKPQKQGWDDKKTFIDLRRAVADEQEIREWEQGAGLKPGDFRQ*
Ga0137381_107558172	3300012207	Vadose Zone Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWESAFPR*
Ga0137379_115866771	3300012209	Vadose Zone Soil	MKSKFTQRRYRAPKRSARAMFKPQQRGWADKKTPGDLRRVIAQEQQIREWERA
Ga0137377_104456091	3300012211	Vadose Zone Soil	TQRRYRAQKRSDCAMFKPQQRGRADKKTPGDLRRVIAQEQQIREWERAFPT*
Ga0137372_104010422	3300012350	Vadose Zone Soil	MKSKFTQRRYRAPKQRACGLCKPQQRGWADKKTAGDLRRAIAQEQQIRELERAVPR*
Ga0137366_102842594	3300012354	Vadose Zone Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAIAQEQQIRELERAFPR*
Ga0137371_101940422	3300012356	Vadose Zone Soil	MKSKFTQRRYRAPKQRACGLCKPQQRGWADKKTAGDLRRAIAHEQQIRELERAVPR*
Ga0137368_105905713	3300012358	Vadose Zone Soil	MKTKALQRRYRAPKRSVCAMCKPHQRGWADKKTPGDLRRAIAQEQQIREWERAFSR*
Ga0137385_102249203	3300012359	Vadose Zone Soil	MKSKFTQRRYRARKRSACALCKPHQQGWADKKTFTDVRRAVADEHQIRDWQAAAGLTADDSG*
Ga0137385_109908251	3300012359	Vadose Zone Soil	MKSKLTQRRYRAPKRSACGLCKPQKRGWADKKTVADLRRAVGQEQQISDWERLPAI*
Ga0137360_105462912	3300012361	Vadose Zone Soil	MKTKFTQRRYRAPKRSACALCKAHQQGWADKKTFSDVRRAVADEHQLRDWEAAVGLTADDSG*
Ga0137361_106744083	3300012362	Vadose Zone Soil	MKTKLTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRAVGQEQALWEEEMGKK*
Ga0137361_108371992	3300012362	Vadose Zone Soil	MKSKVTQRRYRAPKRSACGLCKPQKRGWADKKTVADLRRAVGQEQQIRDWERLPAI*
Ga0137390_117043322	3300012363	Vadose Zone Soil	MKSKMTQRRYRAPKRSACGLCKPQKRGWADKKTVADLRRAVGQEQQIRDCQRSF*
Ga0137373_103636261	3300012532	Vadose Zone Soil	MKSKFTQRRYRAPKRSACGLCKPQKRGWADKKTVTDLRRAIGQEQQIREWERALLP*
Ga0137373_113060881	3300012532	Vadose Zone Soil	LKSKFTQRRYRAPKQRACGLCKPQQRGWADKKTAGDLRRAIAQEQQIRELERAVPR*
Ga0137397_109105152	3300012685	Vadose Zone Soil	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQQQQIREWERSV*
Ga0137359_100663134	3300012923	Vadose Zone Soil	MKTKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQEQQIREWS*
Ga0137359_102007833	3300012923	Vadose Zone Soil	MKSKFTQRRYRAPKRSACGLCKPQKRGWDDKKTFNDLRRAIAQEQQIRELERAFPR*
Ga0137359_106074854	3300012923	Vadose Zone Soil	LKSKFTQRRYRAPKRSACGLCKPQKRGWADKKTVAYLRRAVGQEQQIRDWERLPAI*
Ga0137359_106143373	3300012923	Vadose Zone Soil	YRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQQQQIREWS*
Ga0137404_102234972	3300012929	Vadose Zone Soil	MKTKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAQEQQVREWERSL*
Ga0164298_104214633	3300012955	Soil	MKSKFTQRRYRAPKRSACGLCKPHQQGWAHKKTFVDVRRGVAHEQQVRDWEKESVGVER*
Ga0164301_101414714	3300012960	Soil	MKSKFTQRRYRAPKRSACGLCKPHQQGWADKKTFADVRGGVAHEQQVRDWEKESVGVER*
Ga0164301_112170131	3300012960	Soil	MRDFGETDALAAMKSKFTQRRYRAPKRSACGLCKPQKQGWDDKKTFNDLRRAIGQEQQVREWERSV*
Ga0126369_104723561	3300012971	Tropical Forest Soil	LKSKFTQRHYRARKRSACALCKPHQQGWADKKTFGDVRRADAHEQQVRDWEQGIIASDF*
Ga0134077_101438781	3300012972	Grasslands Soil	MKTKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQQQQIRDWEDITPK*
Ga0137403_100288987	3300015264	Vadose Zone Soil	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQQQQIREWS*
Ga0134085_105409143	3300015359	Grasslands Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPSDLRRAIAQEQQIREWE
Ga0132256_1012455632	3300015372	Arabidopsis Rhizosphere	MKSKFTQRRYRAPKGSACGLCKPQKQGWADKKTFADVRRAGAHEQQIPDWE
Ga0132255_1052087541	3300015374	Arabidopsis Rhizosphere	RRDFGETDAIASMKSKFTQRRYRASKQRACGLCKPQRQGWADKKTFADVRQAVAHEQEVRGWEQAARLGGEDFC*
Ga0134074_11481591	3300017657	Grasslands Soil	MKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAQEQQVRE
Ga0184604_100885091	3300018000	Groundwater Sediment	LGPLKSRFTQRRYRAPKRSSCAMCKPQKRGWADKKTPGDLRRAIAQEQQIRERSEWGERDRR
Ga0184604_103736492	3300018000	Groundwater Sediment	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQQQQIREWEPSV
Ga0184621_100179502	3300018054	Groundwater Sediment	LTQRRYRAPKRRACGLCKPQKQGWDDKKTFTDLRRAVAHEQEIRDWEQGAGLEPEDFRQ
Ga0184623_102027323	3300018056	Groundwater Sediment	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAIGQERQIREWERAFPR
Ga0066667_122952021	3300018433	Grasslands Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPADMRRAIAQEQQVREWERAFPR
Ga0066669_100141435	3300018482	Grasslands Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAVAHEQEIRDWHEGAGFEPEDYR
Ga0066669_103277622	3300018482	Grasslands Soil	LKSKFTQRRYRAPKRSACGLCKPQKRGWADKKTPADLRRAIGQEQQIRDCNDLSAR
Ga0193720_10445042	3300019868	Soil	GPLKTRFTQRRYRAPKRSSCAMCKPQKQGWDDKKTFADLRREQQIREWS
Ga0193722_10336221	3300019877	Soil	MKSKFTQRRYRAPKRSSCAMCKPHQRGWADKKTPGDLRRVIAQEQQICEWERAFSR
Ga0193723_10313491	3300019879	Soil	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFTDVRRAVADEHQLRDWEAAAGSTADDFANMKAAHEG
Ga0193723_10412902	3300019879	Soil	MKSKFTQRRYRAPKRSACGLCKPQKRGWDDKKTFNDLRRAIAQEQQIRELERAFLR
Ga0193723_10552273	3300019879	Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPADLRRAIAQEQQVRELERSV
Ga0193707_11444341	3300019881	Soil	RSVPMKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRSAIGQQQQIREWERSV
Ga0193747_11135812	3300019885	Soil	MKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFTDVRRASADEHQIRDWEAASGLTADDFR
Ga0193727_10040469	3300019886	Soil	MKSKFTQRRYRAPKQRACGLCKPQKQGWADKKTFADVRQAVAHEQEVRDWEGDVGLEPEDSRQ
Ga0193751_10018958	3300019888	Soil	MKSKMTQRRYRAPKRSACGLCKPQKRGWADKKTPADLRRAIGQEQQIRDCNDLSDR
Ga0193751_10569702	3300019888	Soil	MKSKITQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAIAQEQQIREWERAFPC
Ga0193755_10250071	3300020004	Soil	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFTDVRRAVADEHQLRDWEAAAGSTADDFANMKAAH
Ga0193755_10799702	3300020004	Soil	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRSAIGQQQQIREWERSA
Ga0193735_10776143	3300020006	Soil	MKSKFTQRRYRAPKRSSMCKPHKQGWDDKKTFTDVRQAVAHEQE
Ga0193721_10079554	3300020018	Soil	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQQQQIREWERSV
Ga0210407_103950212	3300020579	Soil	MKSKMTQRRYRAPKRSACGLCKPQKRGWADKKTVADLRRAVGQEQQIGDWERSPLTRLGS
Ga0210382_100290904	3300021080	Groundwater Sediment	MKSKFTQRRYRAPKRSACGLCKPQKQGWADKKTFADARRAVAHEHEIRDWEQRLSSTR
Ga0193709_10057971	3300021411	Soil	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRRAIGQQQQIHEWEQGAGLKPEDRR
Ga0224452_12383421	3300022534	Groundwater Sediment	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFTDVRHAVAHEHQLRDWEAAAGLTACD
Ga0207684_101697194	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKMTQRRYRAPKRSACGLCKPQKRGWADKKTVAGLPRAVGQEQQIRDWQRSF
Ga0207684_102395364	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKFTQRRYWASKRSSCAMCEPQQRGWADKKTPGDLRRAIGQEQQIREWERAFPR
Ga0207684_105895041	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKLTQRRYRAPKPSACGLCKPQKRGWADKKTVAGLRRAVGQEQQIRDWER
Ga0207700_108350803	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKFTQRRYRAPKRSACGLWKPQKQGWADKKTFADVRRAVAHEQQMREWERACSH
Ga0207665_116455422	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKFTQRRNRAPKRSACGLCKPQKQGWADKKTFADVRRAVAHEQQMREWERACSH
Ga0209235_11589763	3300026296	Grasslands Soil	MKSKFTQRRYRAPKRSACAMCKPQQRGWADKKTPGDLRRVIAQEQQIREWERAFPT
Ga0209238_12164583	3300026301	Grasslands Soil	MKSKFIQRRYRAPKRSSCAICKPQQRGWADKKTPGDLRRTIGQEHQI
Ga0209470_13566211	3300026324	Soil	MKSKFTQRRYRAPKRSACALCKPHQQGRADKKTFADVRRAIADEHQIRDWEQQPD
Ga0209378_13044532	3300026528	Soil	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFTDVRRAVADEHQLRDWEAAAGSTADDSG
Ga0209157_12136443	3300026537	Soil	MKTKFTQRRYRAPKRSSCAMCKPQKQGWADKKTFADVRQAVAHEQEIRDWEQAAGLKPEDFRQ
Ga0209157_13296132	3300026537	Soil	MKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVAHEQQVRDWEKESGVER
Ga0209056_101626275	3300026538	Soil	MKTKAIQRRYRAPKRSACGLSKSHQRGWADKKTPSDLRRALAQEQQIREWS
Ga0209419_10775792	3300027537	Forest Soil	LKTRFTQRRYRAPKRRACGLCKPQKQGWDDKKTFIDLRRAVADEQEIREWEQGAGLELGDFRQ
Ga0209388_10696133	3300027655	Vadose Zone Soil	MKSKFTQRRYRAPKRSACAMCNPQKRGWADKKTVTDLRRAIGQQQQIREWS
Ga0307302_106710492	3300028814	Soil	MKSKFTQRRYRAPKRRACGLCKPQKQGWDDKKTFADARRAVAHEQEIRDWEQRLSSAR
Ga0307296_101475064	3300028819	Soil	MKSKFTQRRYRAPKRSACAMCKPQKRGWADKKTVTDLRSAIGQQQQIREWERSV
Ga0307278_1000012343	3300028878	Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPGDLRRAIGQEQQIREWERAFPR
Ga0170824_1106939533	3300031231	Forest Soil	MKSKFTQRRYRAPKHSSCAMCKPQQRGWADKKTPGDLRRAIAQEQQIRDWERAFPR
Ga0170824_1184395222	3300031231	Forest Soil	LKSKFTQRRYRAPKRSACALCKPHQQGWADKKTFADVRRAVGHEQEIRDWEQGAGLTAEDFR
Ga0170818_1062425953	3300031474	Forest Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTLGDLRRAIGQEQQIRDWEQRLSSAY
Ga0310813_100778163	3300031716	Soil	MKSKFTQRRYRASKRRACGLCKPQKQGWADKKTFADVRRAVAHEQQIREWQRAFPH
Ga0307471_1004655463	3300032180	Hardwood Forest Soil	MKSKLTQRRYRAPKRSACGLCKPQKRGWADKKTVADLRRAVGQEQQIRDWERLTFALRPPTSDL
Ga0307471_1009155222	3300032180	Hardwood Forest Soil	MKSKFTQRRYRAPKRSSCAMCKPQQRGWADKKTPSDLRRAIAQEQQIREWERAFPRSPITNH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences