Metagenome / Metatranscriptome Family F048443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048443
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	57 residues
Representative Sequence	MAGRTECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSREADERD
Number of Associated Samples	99
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.11 %
% of genes near scaffold ends (potentially truncated)	20.27 %
% of genes from short scaffolds (< 2000 bps)	85.14 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.865 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.540 % of family members)
Environment Ontology (ENVO)	Unclassified (33.108 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.162 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.02% β-sheet: 0.00% Coil/Unstructured: 56.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF02518	HATPase_c	47.30
PF03176	MMPL	8.78
PF00486	Trans_reg_C	4.73
PF07386	DUF1499	0.68
PF01592	NifU_N	0.68
PF12867	DinB_2	0.68
PF00903	Glyoxalase	0.68
PF00005	ABC_tran	0.68
PF13506	Glyco_transf_21	0.68
PF02082	Rrf2	0.68
PF01408	GFO_IDH_MocA	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	8.78
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	8.78
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.68
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.68
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.68
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.68
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.68
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.68
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.68
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.68
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.51 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	87.16 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	52.03 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	30.41 %
Unclassified	root	N/A	10.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	52.03 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	17.57 %
Unclassified	root	N/A	10.14 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.35 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	52.03 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	14.19 %
Unclassified	root	N/A	10.14 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	3.38 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.68 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	52.03 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	14.19 %
Unclassified	root	N/A	10.14 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	3.38 %
Methylobacterium tardum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium tardum	0.68 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10000461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31457	Open in IMG/M
3300004080\|Ga0062385_10386355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	832	Open in IMG/M
3300004092\|Ga0062389_101120443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	973	Open in IMG/M
3300004092\|Ga0062389_102163910	Not Available	730	Open in IMG/M
3300005332\|Ga0066388_105071950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	669	Open in IMG/M
3300005458\|Ga0070681_10053404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4027	Open in IMG/M
3300005534\|Ga0070735_10114588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1688	Open in IMG/M
3300005534\|Ga0070735_10311078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	949	Open in IMG/M
3300005537\|Ga0070730_10106988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1930	Open in IMG/M
3300005541\|Ga0070733_11200553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300005547\|Ga0070693_100843405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	682	Open in IMG/M
3300005602\|Ga0070762_10377020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	909	Open in IMG/M
3300005602\|Ga0070762_10509028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300005610\|Ga0070763_10811298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300005764\|Ga0066903_101066616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1485	Open in IMG/M
3300005921\|Ga0070766_10346911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	963	Open in IMG/M
3300006050\|Ga0075028_100624332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	642	Open in IMG/M
3300006050\|Ga0075028_100678930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	618	Open in IMG/M
3300006176\|Ga0070765_100187342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1871	Open in IMG/M
3300006176\|Ga0070765_100187559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1870	Open in IMG/M
3300006176\|Ga0070765_100192815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1846	Open in IMG/M
3300006638\|Ga0075522_10018457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4431	Open in IMG/M
3300010048\|Ga0126373_10013258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	6753	Open in IMG/M
3300010048\|Ga0126373_10228626	All Organisms → cellular organisms → Bacteria → Proteobacteria	1819	Open in IMG/M
3300010048\|Ga0126373_10299862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1602	Open in IMG/M
3300010361\|Ga0126378_11176390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300010366\|Ga0126379_12978563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300010376\|Ga0126381_100302220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2192	Open in IMG/M
3300010376\|Ga0126381_101108270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1143	Open in IMG/M
3300010376\|Ga0126381_103602087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300011120\|Ga0150983_13259100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300011120\|Ga0150983_16715117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300012176\|Ga0153952_1055157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300012180\|Ga0153974_1046469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	951	Open in IMG/M
3300012982\|Ga0168317_1047583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1086	Open in IMG/M
3300014156\|Ga0181518_10003005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	15866	Open in IMG/M
3300014169\|Ga0181531_10054896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2331	Open in IMG/M
3300014169\|Ga0181531_10125328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1545	Open in IMG/M
3300014169\|Ga0181531_10421247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300014495\|Ga0182015_11016418	Not Available	513	Open in IMG/M
3300014501\|Ga0182024_10007196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	24081	Open in IMG/M
3300014501\|Ga0182024_10127211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3630	Open in IMG/M
3300014654\|Ga0181525_10569370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300014657\|Ga0181522_10667133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300014657\|Ga0181522_10747053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300017822\|Ga0187802_10159006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300017823\|Ga0187818_10440848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300017943\|Ga0187819_10144416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1418	Open in IMG/M
3300017955\|Ga0187817_10638944	Not Available	679	Open in IMG/M
3300017961\|Ga0187778_10519080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300017972\|Ga0187781_10056110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2710	Open in IMG/M
3300017972\|Ga0187781_10752513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300017972\|Ga0187781_11176286	Not Available	564	Open in IMG/M
3300017973\|Ga0187780_10238309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1272	Open in IMG/M
3300017995\|Ga0187816_10135988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1061	Open in IMG/M
3300018007\|Ga0187805_10376209	Not Available	658	Open in IMG/M
3300018034\|Ga0187863_10726651	Not Available	561	Open in IMG/M
3300018042\|Ga0187871_10083848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1855	Open in IMG/M
3300018062\|Ga0187784_10405030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1103	Open in IMG/M
3300018062\|Ga0187784_11211113	Not Available	599	Open in IMG/M
3300018062\|Ga0187784_11654834	Not Available	507	Open in IMG/M
3300018085\|Ga0187772_10502796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300018085\|Ga0187772_11258052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300018086\|Ga0187769_11543583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300018088\|Ga0187771_10459694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1076	Open in IMG/M
3300018088\|Ga0187771_11591419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300018090\|Ga0187770_10199640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1539	Open in IMG/M
3300019166\|Ga0184595_130615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300019260\|Ga0181506_1132093	Not Available	697	Open in IMG/M
3300020579\|Ga0210407_10371050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1120	Open in IMG/M
3300020580\|Ga0210403_11420504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300020581\|Ga0210399_10283695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1382	Open in IMG/M
3300020582\|Ga0210395_10603722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300020582\|Ga0210395_10712528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300020582\|Ga0210395_11201684	Not Available	557	Open in IMG/M
3300020582\|Ga0210395_11342478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300021181\|Ga0210388_10162927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1942	Open in IMG/M
3300021181\|Ga0210388_10302603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1405	Open in IMG/M
3300021362\|Ga0213882_10481959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300021401\|Ga0210393_10644856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300021401\|Ga0210393_11648824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300021402\|Ga0210385_10254251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1292	Open in IMG/M
3300021407\|Ga0210383_10271520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1457	Open in IMG/M
3300021407\|Ga0210383_11493590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300021433\|Ga0210391_10479743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	976	Open in IMG/M
3300021475\|Ga0210392_10084016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2057	Open in IMG/M
3300021477\|Ga0210398_10214623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1568	Open in IMG/M
3300021477\|Ga0210398_11569703	Not Available	511	Open in IMG/M
3300021479\|Ga0210410_11468627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300021560\|Ga0126371_10054264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3843	Open in IMG/M
3300021560\|Ga0126371_10492520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1374	Open in IMG/M
3300021560\|Ga0126371_11402418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300021560\|Ga0126371_12172411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	669	Open in IMG/M
3300021560\|Ga0126371_13123572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300021861\|Ga0213853_10876050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300022502\|Ga0242646_1017744	Not Available	652	Open in IMG/M
3300022840\|Ga0224549_1061806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300025627\|Ga0208220_1005609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium tardum	4571	Open in IMG/M
3300025912\|Ga0207707_10089190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2695	Open in IMG/M
3300027030\|Ga0208240_1039188	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300027625\|Ga0208044_1105161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300027842\|Ga0209580_10140030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1187	Open in IMG/M
3300027853\|Ga0209274_10149585	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300027867\|Ga0209167_10294150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	877	Open in IMG/M
3300027867\|Ga0209167_10788697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300027895\|Ga0209624_10605940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300027905\|Ga0209415_10515094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	916	Open in IMG/M
3300028906\|Ga0308309_10181157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1722	Open in IMG/M
3300028906\|Ga0308309_10368917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1227	Open in IMG/M
3300029701\|Ga0222748_1117362	Not Available	534	Open in IMG/M
3300030013\|Ga0302178_10069273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1881	Open in IMG/M
3300030730\|Ga0307482_1232429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031022\|Ga0138301_1446797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031231\|Ga0170824_101361398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300031234\|Ga0302325_11387575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300031234\|Ga0302325_12086685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300031234\|Ga0302325_12654927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300031236\|Ga0302324_100732997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1389	Open in IMG/M
3300031236\|Ga0302324_101154963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300031236\|Ga0302324_101244300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	988	Open in IMG/M
3300031241\|Ga0265325_10048197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2203	Open in IMG/M
3300031446\|Ga0170820_14401415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031474\|Ga0170818_107735508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300031708\|Ga0310686_108694543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2416	Open in IMG/M
3300031708\|Ga0310686_110469758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300031715\|Ga0307476_10425097	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300031715\|Ga0307476_11063193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300031715\|Ga0307476_11377991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031866\|Ga0316049_109823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300031872\|Ga0316033_113593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031945\|Ga0310913_10471267	Not Available	892	Open in IMG/M
3300031954\|Ga0306926_11787890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300032261\|Ga0306920_103817726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300032515\|Ga0348332_12114108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300032770\|Ga0335085_10000557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	101806	Open in IMG/M
3300032770\|Ga0335085_12377910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300032783\|Ga0335079_10055551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4523	Open in IMG/M
3300032783\|Ga0335079_10078252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3760	Open in IMG/M
3300032895\|Ga0335074_10125649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	3310	Open in IMG/M
3300032895\|Ga0335074_10626940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1063	Open in IMG/M
3300032895\|Ga0335074_10629515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1060	Open in IMG/M
3300032895\|Ga0335074_11179154	Not Available	649	Open in IMG/M
3300032954\|Ga0335083_10279031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1479	Open in IMG/M
3300032955\|Ga0335076_10121136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2538	Open in IMG/M
3300032955\|Ga0335076_10408595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1242	Open in IMG/M
3300033134\|Ga0335073_10185270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2601	Open in IMG/M
3300033134\|Ga0335073_10766377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1042	Open in IMG/M
3300033134\|Ga0335073_11962202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.97%
Host-Associated	Host-Associated	2.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.11%
Aquatic	Environmental → Aquatic	14.86%
Fungi	Host-Associated → Fungi	1.35%
Plants	Host-Associated → Plants	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.68%
Freshwater	Environmental → Aquatic → Freshwater	13.51%
Peat	Environmental → Terrestrial → Peat	5.41%
Sediment	Environmental → Aquatic → Sediment	1.35%
Mycelium	Host-Associated → Fungi → Mycelium	1.35%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.68%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%
Geologic	Environmental → Terrestrial → Geologic	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.84%
Loam	Environmental → Terrestrial → Soil → Loam	12.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.35%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%
Mine	Environmental → Terrestrial → Geologic → Mine	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.35%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.35%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.35%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.03%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.03%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.35%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.35%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.35%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.35%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.68%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019166	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031872	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000046112	3300000567	Peatlands Soil	MADRECCRYEPSLDELLDDEMMQPVLQSAGLDRERFHDLLVETGERVRLSRESE*
Ga0062385_103863552	3300004080	Bog Forest Soil	MAGRNECCRYEPSLDELLADDIMKPVLESAGYDRERFHDMIVETGERVRLSRGGERE*
Ga0062389_1011204432	3300004092	Bog Forest Soil	MAGRTECCRYEASLDELLADDIMEPVLQSAGYNRERFHDLMVETGER
Ga0062389_1021639102	3300004092	Bog Forest Soil	MPDRTECCRYEPSLDELLADDDMMQPVLQSAGLDREQFHDLMLETSERLRQSRDADGE*
Ga0066388_1050719501	3300005332	Tropical Forest Soil	MAGRNECCRYEPSLDELLADEIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFERD*
Ga0070681_100534042	3300005458	Corn Rhizosphere	MAARADCCRYEPSLDELLADEMMQPVLQSAGYDRERFHDMMVETGERVRLSRETDGEGF*
Ga0070735_101145882	3300005534	Surface Soil	MAGRTECCRYEPSLDELIADEMMQPVLQSAGLDRERFHDLMVETGERLRLSRQGFGE*
Ga0070735_103110782	3300005534	Surface Soil	MADRTDCCRYEPSLDDLLEDEMMKPVLQSAGLDRERFHDLMVETGERFRQSRAGVGARGWE*
Ga0070730_101069881	3300005537	Surface Soil	MDDRNNCCRYEPSLDELLDDEMMQPVLQSAGLDRERFHDLLVETGERVRLSRESE*
Ga0070733_112005531	3300005541	Surface Soil	MAGRNECCRYEPSLDELLDDEMMTPVLESAGYDRDRFHDLMVETGERVRLSRAGCERD*
Ga0070693_1008434052	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAARADCCRYEPSLDELLADEMMQPVLQSAGYDRERFHDMMVETGERVRLSRESDEAF*
Ga0070762_103770201	3300005602	Soil	MSGRDGCCRYEPSLDELLADDIMQPVLQSAGYDREQFHDLMIETGERVRLSRVIDERD*
Ga0070762_105090282	3300005602	Soil	MAGRNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFERA*
Ga0070763_108112981	3300005610	Soil	MDARNDCCRYEPSLDDLLADDIMQPVLESAGYDRERFHDLMVETCERVRLAREGFGEGD*
Ga0066903_1010666162	3300005764	Tropical Forest Soil	MAGHAPCCRYEPSLDELLADDMMQPVLESAGYDRERFHDLMVETSERIRLSRETDGRD*
Ga0070766_103469112	3300005921	Soil	MADRTECCRYEPSLAELIDDDMMQPVLQSAGLDRERFHDLMVETGDRIRLSREADVE*
Ga0075028_1006243322	3300006050	Watersheds	MAGRTDCRRYEPSLDELLADEMMQPVLQSAGYDRERFHDMIVETGERIRLSREPGGEGFW
Ga0075028_1006789301	3300006050	Watersheds	MADRMECCRYEPSLDELLDDEMMQPVLESAGLNRERFHDLLVETGERVRLSREND*
Ga0070765_1001873421	3300006176	Soil	GIMDARNDCCRYEPSLDDLLADDIMQPVLESAGYDRERFHDLMVETCERVRLAREGFGEGD*
Ga0070765_1001875592	3300006176	Soil	MDARNDCCRYEPSLDDLLADEIMQPVLESAGYDRERFHDLMVETGERVRLAREGFGERD*
Ga0070765_1001928152	3300006176	Soil	MAGRNECCRYEASLDELLADDIMRPVLESAGYDRERFHDLMVETGERVRLSREAERD*
Ga0075522_100184575	3300006638	Arctic Peat Soil	MAARTECCRNEPSLDELLADDIMRPVLESAGYDRERFHDLMIETGERVRLSREGEGE*
Ga0126373_100132582	3300010048	Tropical Forest Soil	MAGRTECCRYEPSLDELLADEMMQPVLQSAGYDRERFHDLMIETGERIRLSREGFERD*
Ga0126373_102286262	3300010048	Tropical Forest Soil	MAGRTECCRYEPSLDELLADDMMRPVLESAGYDRERFHDLMVETSERIRLSRETDGRD*
Ga0126373_102998622	3300010048	Tropical Forest Soil	MAGRTECCRYEPSLEELLADDIMRPVLQSAGYDRERFHDLMIETGERVRLSRELGERE*
Ga0126378_111763902	3300010361	Tropical Forest Soil	MAGRTECCRYEPSLDELLADEIMQPVLQSAGYDRERFHDLMIETGERIRLSREGFERD*
Ga0126379_129785631	3300010366	Tropical Forest Soil	MAGRNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFERD*
Ga0126381_1003022202	3300010376	Tropical Forest Soil	MAGRTECCRYEPSLDELLADEMMQPVLQSAGYDRERFHDLMIETGERIRLSREGPERD*
Ga0126381_1011082702	3300010376	Tropical Forest Soil	MAGRNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSRGGFEQE*
Ga0126381_1036020871	3300010376	Tropical Forest Soil	MAGRTECCRYEPSLDELLADDMMQPVLESAGYDRERFHDLMVETRERIRLSRETEGRD*
Ga0150983_132591001	3300011120	Forest Soil	MSGRDCCRYEASLDELLDDDIMQPVLESAGYDRERFHDLMVETGERVRLSREGFGPRD*
Ga0150983_167151172	3300011120	Forest Soil	EGIMADRTDCCRYELSLDDLLDDDMMQPVLQSAGLDRERFHDLMIETGERVRLSREAE*
Ga0153952_10551572	3300012176	Attine Ant Fungus Gardens	MAGRTECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSREANERD*
Ga0153974_10464692	3300012180	Attine Ant Fungus Gardens	MMAGHNQCCRYEASLEELLADDIMRPVLQSAGYDRERFRDLIVETGERFRQSRDNEERDW
Ga0168317_10475832	3300012982	Weathered Mine Tailings	MDGRIECCRYEPSLDELLADDIMQPVLQSAGYNRERFHDLMVETGERVRLSRESDELD*
Ga0181518_1000300513	3300014156	Bog	MADRTECCRYEPSLAELIDDDMMQPVLQSAGLDRERFHDLMVETGERIRLSREADGE*
Ga0181531_100548961	3300014169	Bog	MAGRTECCRYEASLDELLADDIMEPVLQSAGYDRERFHDLMVETGERVRLSRESDERDWERTESGFCFN*
Ga0181531_101253282	3300014169	Bog	MAGRECCRYEPSLDELLDDDIMTPVLESAGYDRERFHDLLVETGERVRQSRVGFSERD*
Ga0181531_104212472	3300014169	Bog	MAGHDECCRYEPSLDELLADEIMQPVLQSAGYDRERFHDLMVETGERVRLSRESDERD*
Ga0182015_110164181	3300014495	Palsa	MAGPNRCCRSEPSLDELLADDIMKPVLRSAGFDREQFHDLMVETGERVRLSREADDERD*
Ga0182024_1000719617	3300014501	Permafrost	MADRTDCCRYEPSLDELIADEMMRPVLESAGLDRERFHDLMVETGERLRQSRQGFGE*
Ga0182024_101272112	3300014501	Permafrost	MAGRTECCRYEASLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSREGDRDWD*
Ga0181525_105693702	3300014654	Bog	MAGHDECCRYEPSLDELLADEIMQPVLQSAGYDRERFHDLMVETGERVRLSR
Ga0181522_106671332	3300014657	Bog	MAGHDECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSRESDERD*
Ga0181522_107470532	3300014657	Bog	MAGRNECCRYEPSLDELLDDDIMRPVLESAGYDRERFHDLMVETGERVRLSREGFGSRD*
Ga0187802_101590062	3300017822	Freshwater Sediment	MAGHNQCCRYEASLEELLADDIMRSVLQSAGYDRERFRDLIVETGERFRQSRDNEEHDW
Ga0187818_104408481	3300017823	Freshwater Sediment	MAGRNECCRYEPSLDELLDDDIMQPVLQSAGYDRERFHDLMVETGERVRLSREADERD
Ga0187819_101444162	3300017943	Freshwater Sediment	MAGRNECCRYEPSLDELLDDDIMQPVLQSAGYDRERFHDLMVETGERARLSREADERD
Ga0187817_106389441	3300017955	Freshwater Sediment	MAGHNQCCRYEASLEELLADDIMRSVLQSAGYDRERFRDLIAETGERFRQSRDSEERDW
Ga0187778_105190802	3300017961	Tropical Peatland	MADRAGCCRYEPSLDELIADEIMQPVLENAGLDRERFHNLMLETGERLRLSRESEEGYR
Ga0187781_100561102	3300017972	Tropical Peatland	MAGRTECCRYEPSLDELLADDMMQPVLESAGYDRERFVDLMVETGERVRQSREAAERD
Ga0187781_107525132	3300017972	Tropical Peatland	ACCRYEPSLDELLDDEMMQPVLQSAGLDRDRFHDLLIEAGERIRLSRGPDGE
Ga0187781_111762861	3300017972	Tropical Peatland	MADRTQCCRYEPSLDELLDDEMMQPVLQSAGLDRDRFHDLMLETGARIRLSRESDGE
Ga0187780_102383092	3300017973	Tropical Peatland	MADRTNCCRYEPSLDELLDDEMMQPVLQSAGLDRERFHELLVETGERVRLSRESE
Ga0187816_101359881	3300017995	Freshwater Sediment	MAGHNQCCRYEASLEELLADDIMRPVLQSAGYDRERFRDLIVETGERFRQSRDNEERNW
Ga0187805_103762092	3300018007	Freshwater Sediment	MAGHNQCCRYEASLEELLADDIMRPVLQSAGYDRERFRDLIAETGERFRQSRDSEERDW
Ga0187863_107266512	3300018034	Peatland	MANRTECCRWEPSLAELIDDDMMQPVLQSAGLDRERFHDLMVETGARIRLSRDADGE
Ga0187871_100838481	3300018042	Peatland	MANRTECCRWEPSLAELIDDDMMQPVLQSAGLDRERFHDLMVETGARIRLSRD
Ga0187784_104050302	3300018062	Tropical Peatland	MADRTQCCRYEPSLDELLDDEIMQPVLQSAGRDRDRFHDLMLETGARIRLSRESDGE
Ga0187784_112111132	3300018062	Tropical Peatland	MTDRKACCRYEPSLDELLDDEMMQPVLQSAGLDRDRFHDLLIEAGERIRLSRGPDGDF
Ga0187784_116548341	3300018062	Tropical Peatland	RYEPSLDELLADDIMQPVLESAGYDRDQFHELMVETGKRVRLSREGFGEPD
Ga0187772_105027962	3300018085	Tropical Peatland	MDDREYCCRYEPSLDELLDDEMMQPVLQSAGLDREQLHDLLVETRERVRLSREADDR
Ga0187772_112580522	3300018085	Tropical Peatland	MTIRTECCRCEPSLDELLNDDMMQPVLRSAGLDRDRFHDLLVETGERVRLSREVDDWR
Ga0187769_115435832	3300018086	Tropical Peatland	MADRTECCRYEPSLDELLDDDMMQPVLQSAGLDRERFHDLMLETGERIRLSREAGGE
Ga0187771_104596942	3300018088	Tropical Peatland	MAGHNQCCRYEASLEELLADDIMRPVLQSAGYDRERFRDLIVETGERFRQSRDNEERDW
Ga0187771_115914191	3300018088	Tropical Peatland	MAGRNECCRYEPSLDELLADDIMQPVLESAGYNRERFHDMIVETGERVRLSREGFGERD
Ga0187770_101996402	3300018090	Tropical Peatland	MAGHNQCCRYEVSLEELLADDIMRPVLQSAGYDRERFRDLIVETGERFRQSRDNEERDW
Ga0184595_1306152	3300019166	Soil	AGRAECCRYEPSLDELLADDIMRPVLQSAGYNREQFHDLMVETGERVRLSREIDECD
Ga0181506_11320932	3300019260	Peatland	MAGRTECCRYEASLDELLADDIMEPVLQSAGYDRERFHDLMVETGERVRLSRESDERDWERTESGFCFN
Ga0210407_103710501	3300020579	Soil	MAGRNECCRYEPSLDELLADEIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFEHA
Ga0210403_114205041	3300020580	Soil	MADRADCCRYEPSLDELLDDEMMEPVLQSAGLDRERFHDLMVETRERVRQSRESE
Ga0210399_102836952	3300020581	Soil	MADRECCRYEPSLDELLDDEMMQPVLQSAGLDRERFHDLLVETGERVRLSREAE
Ga0210395_106037222	3300020582	Soil	MSGRECCRYEPSLDELLADDIMQPVLESAGYDRERFHDLMVETGERFRLSREGVGPRD
Ga0210395_107125281	3300020582	Soil	RTDCCRYELSLDDLLDDDMMQPVLQSAGLDRERFHDLMIETGERVRLSREAE
Ga0210395_112016842	3300020582	Soil	MAGRYECCRYEASLDELLADDIMQPVLESAGYDRERFHDLMVETGERVRLSREAERD
Ga0210395_113424781	3300020582	Soil	MAGRTECCRYEPSLDELLADDMMQPVLESAGYNRERFVDLMVETGERVRLSREATQRD
Ga0210388_101629272	3300021181	Soil	MSGRDGCCRYEPSLDELLADDIMQPVLQSAGYDREQFHDLMIETGERVRLSRVIDERD
Ga0210388_103026031	3300021181	Soil	MSGRDCCRYEASLDELLDDDIMQPVLESAGYDRERFHDLMVETGERVRLSREADERE
Ga0213882_104819592	3300021362	Exposed Rock	MAGRKECCRYEPSLDELLADDIMQPVLESAGYDRERFHDLMIETGERVRLSREGDSRD
Ga0210393_106448562	3300021401	Soil	MAGRIECCRRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSRETDECD
Ga0210393_116488241	3300021401	Soil	MADRTDCCRYELSLDDLLDDDMMQPVLQSAGLDRERFHDLMIETGERVRLSREAE
Ga0210385_102542512	3300021402	Soil	MADRTDCCRYEPSLDELIADEMMQPVLQSAGLDRERFHDLMVETGERLRLSRQGFGE
Ga0210383_102715201	3300021407	Soil	MSGRDGCCRYEPSLDELLADDIMQPVLESAGYDRERFHDLMVETGERVRLSRVG
Ga0210383_114935902	3300021407	Soil	MAGRIECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSRETDECD
Ga0210391_104797432	3300021433	Soil	MADRTECCRYEPSLAELIDDDMMQPVLQSAGLDRERFHDLMVETGDRIRLSREADVE
Ga0210392_100840162	3300021475	Soil	MAGRNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFERA
Ga0210398_102146232	3300021477	Soil	MAGRKECCRYEPSLDDLLADDIMQPVLESAGYDRERFHDLMIETGERVRLSREGEAE
Ga0210398_115697031	3300021477	Soil	MAGRYDCCRYEASLDELLADDIMAPVLESAGYDRERFHDLMVETGERVRLSRETD
Ga0210410_114686271	3300021479	Soil	MAGRNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFARD
Ga0126371_100542642	3300021560	Tropical Forest Soil	MAGRTECCRYEPSLDELLADEIMQPVLQSAGYDRERFHDLMIETGERIRLSREGPERD
Ga0126371_104925202	3300021560	Tropical Forest Soil	MAGRTECCRYEPSLEELLADDIMRPVLQSAGYDRERFHDLMIETGERVRLSRELGERE
Ga0126371_114024181	3300021560	Tropical Forest Soil	MAGRNECCRYEPSLDELLADDIMQPVLESAGYDRDRFHDLMVETGERIRLSREGFERD
Ga0126371_121724112	3300021560	Tropical Forest Soil	MAGRAPCCRYEPSLDELLADDMMQPVLESAGYDRERFHDLMVETSERIRLSRETDGRD
Ga0126371_131235721	3300021560	Tropical Forest Soil	RGIMAGRTECCRYEPSLDELLDDDIMQPVLQSAGYDRERFHDLMVETGERVRLSRESDER
Ga0213853_108760501	3300021861	Watersheds	DRMECCRYEPSLAELLDDEMMQPVLESAGLDRERFHDLLVETGERVRLSREND
Ga0242646_10177441	3300022502	Soil	IMSGRDCCRYEASLDELLDDDIMQPVLESAGYDRERFHDLMVETGERVRLSREGFGPRD
Ga0224549_10618062	3300022840	Soil	MAGRNECCRYEPSLDELLADDIMKPVLESAGYDRERFHDMIVETGERVRLSRETGRD
Ga0208220_10056093	3300025627	Arctic Peat Soil	MAARTECCRNEPSLDELLADDIMRPVLESAGYDRERFHDLMIETGERVRLSREGEGE
Ga0207707_100891902	3300025912	Corn Rhizosphere	MAARADCCRYEPSLDELLADEMMQPVLQSAGYDRERFHDMMVETGERVRLSRETDGEGF
Ga0208240_10391882	3300027030	Forest Soil	ECCRYEPSLDELLADDMMQPVLESAGYDRERFHDLMVETGERIRLSREIDGRD
Ga0208044_11051612	3300027625	Peatlands Soil	MADRECCRYEPSLDELLDDEMMQPVLQSAGLDRERFHDLLVETGERVRLSRESE
Ga0209580_101400302	3300027842	Surface Soil	MDDRNNCCRYEPSLDELLDDEMMQPVLQSAGLDRERFHDLLVETGERVRLSRESE
Ga0209274_101495853	3300027853	Soil	DCCRYEPSLDELLDDDIMRPVLESAGYDRARFHDLMVETGERVRLSREDFGSRD
Ga0209167_102941502	3300027867	Surface Soil	MADRTDCCRYEPSLDDLLEDEMMKPVLQSAGLDRERFHDLMVETGERFRQSRAGVGARGW
Ga0209167_107886971	3300027867	Surface Soil	MAGRNECCRYEPSLDELLDDEMMTPVLESAGYDRDRFHDLMVETGERVRLSRAGCERD
Ga0209624_106059401	3300027895	Forest Soil	ECCRYEPSLAELIDDDMMQPVLQSAGLDRERFHDLMVETGDRIRLSREADVE
Ga0209415_105150942	3300027905	Peatlands Soil	MAGRTPCCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSREADERD
Ga0308309_101811571	3300028906	Soil	MAGRNECCRYEASLDELLADDIMRPVLESAGYDRERFHDLMVETGERVRLSREAERD
Ga0308309_103689172	3300028906	Soil	MDARNDCCRYEPSLDDLLADDIMQPVLESAGYDRERFHDLMVETCERVRLAREGFGEGD
Ga0222748_11173622	3300029701	Soil	MSGRECCRYEPSLNELLDDDIMQPVLESAGFDRERFHDLMVETGERVRLSREGFGPRD
Ga0302178_100692733	3300030013	Palsa	MAGRNECCRYEPSLDDLLADDIMKPVLESAGYDRERFHDMIVETGERVRLSRETGRD
Ga0307482_12324292	3300030730	Hardwood Forest Soil	CCRYEPSLDELLADDIMQPVLQSAGYDREQFHDLMIETGERVRLSRVIDERD
Ga0138301_14467972	3300031022	Soil	KGIMSGRDGCCRYEPSLDELLADDIMQPVLQSAGYDREQFHDLMIETGERVRLSRVIDER
Ga0170824_1013613981	3300031231	Forest Soil	MAGRIECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFERD
Ga0302325_113875752	3300031234	Palsa	MAGRNDCCRYEPSLDELLGDDIMKPVLESAGLDRARFHDLMVETGERVRLSRETEGEPE
Ga0302325_120866852	3300031234	Palsa	MAGRNECCRYEPSLAELLDDDIMTPVLESAGFDRERFHDLMVETGARVRLSREADERD
Ga0302325_126549272	3300031234	Palsa	MAGRNECCRYEPSLDELLDDDIMRPVLRSAGYDRERFHDLMVETGERVRLSREADERD
Ga0302324_1007329972	3300031236	Palsa	MAGRTECCRYEPSLDELLGDDIMKPVLESAGLDRARFHDLMVETGERVRLSREPAGERE
Ga0302324_1011549632	3300031236	Palsa	MAGHDECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSRESDERD
Ga0302324_1012443002	3300031236	Palsa	MADRTECCRYEPSLAELIDDDMMQPVLESAGLDRERFHDLMVETGARLRLSREADGE
Ga0265325_100481972	3300031241	Rhizosphere	MAGRKECCRYEPSLDELLDDDIMTPVLESAGYDRDRFHDLMVETGERVRLSREGVGERS
Ga0170820_144014151	3300031446	Forest Soil	TGCCRYELSLDDLLDDDMMQPVLQSAGLDRERFHDLMIETGERVRLSREAE
Ga0170818_1077355082	3300031474	Forest Soil	GIMADRTDCCRYELSLDDLLDDDMMQPVLQSAGLDRERFHDLMIETGERVRLSREAE
Ga0310686_1086945432	3300031708	Soil	MAGRAECCRYEPSLDELLADDIMRPVLQSAGYDREQFHDLMVETGERVRLSREIDERD
Ga0310686_1104697581	3300031708	Soil	MAGRIECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRQSR
Ga0307476_104250972	3300031715	Hardwood Forest Soil	MAGRAECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSREADDRG
Ga0307476_110631932	3300031715	Hardwood Forest Soil	RNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSRESDRD
Ga0307476_113779912	3300031715	Hardwood Forest Soil	TECCRYEPSLDELLADDMMQPVLESAGYDRERFHDLMVETGERIRLSRESDGRD
Ga0316049_1098232	3300031866	Soil	GIMAGRAECCRYEPSLDELLADDIMRPVLQSAGYDREQFHDLMVETGERVRLSREIDERD
Ga0316033_1135932	3300031872	Soil	GIMAGRAECCRYEPSLDELLADDIMRPVLQSAGYNREQFHDLMVETGERVRLSREIDECD
Ga0310913_104712672	3300031945	Soil	MAGRNECCRYESSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFERD
Ga0306926_117878902	3300031954	Soil	MAGRNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREGFERD
Ga0306920_1038177261	3300032261	Soil	MAGRNECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERIRLSREG
Ga0348332_121141082	3300032515	Plant Litter	GIMAGRADCCRYEPSLDELLADDIMRPVLQSAGYDREQFHDLMVETGERVRLSREIDERD
Ga0335085_1000055743	3300032770	Soil	MVGRIECCRYEPSLDELLDDDIMTPVLESAGYDRDRFHDLMIETGERVRQLREGLDEQA
Ga0335085_123779101	3300032770	Soil	MAGRIECCRYEPSLDELLDDDIMTPVLESAGYDRDRFHDLMIETGERVRLSREDFGERA
Ga0335079_100555513	3300032783	Soil	MDERNICCRYEPSLDELLDDEMMRPVLESAGLDRERFHDLLVETRERVRLSRESE
Ga0335079_100782522	3300032783	Soil	MADRAGCCRYEPSLDELIADEIMQPVLESAGLDRERFHNLMLETGERLRLSRESEEGYR
Ga0335074_101256492	3300032895	Soil	MAGRTECCRYEPSLDELLADDIMQPVLQSAGYDRERFHDLMVETGERVRLSREADERD
Ga0335074_106269402	3300032895	Soil	MVGRECCRYEPSLDELLEDDIMQPVLQSAGYDRERFHDLMVETGERVRLSRESVERD
Ga0335074_106295152	3300032895	Soil	MADRTTCCRYEPSLDELLADEMMQPVLESAGLDREQFHDWVLQTGERLRQSRRLDQD
Ga0335074_111791541	3300032895	Soil	MAGRNDCCRYEPSLDELLDDEMMTPVLESAGYDRERFHDLMVETGERVRLSRRGFSERD
Ga0335083_102790312	3300032954	Soil	MAGRTECCRYEPSLDELLDDDIMTPVLESAGYDRDRFHDLIIETGERVRLSREDFGDRG
Ga0335076_101211362	3300032955	Soil	MAGRNQCCRYEASLEELLADDIMHPVLQSAGYDRERFRDLIVETSERFRQSRDNDERDW
Ga0335076_104085952	3300032955	Soil	MAGRNECCRYEPSLAELLADEIMQPVLESAGYDRERFRDLMVEAGERVRLSREGFGERE
Ga0335073_101852702	3300033134	Soil	MAGRTECCRYEASLDELLADDMMQPVLQSAGYDRERFHDLMVETGERVRLSREGFGERD
Ga0335073_107663772	3300033134	Soil	MAGRYECCRYEPSLDDLLEDDIMTPVLESAGFDRERFHDLMVETGARVRLLREAAFQPD
Ga0335073_119622021	3300033134	Soil	MAGRNECCRYEPSLDELLDDDIMTPVLESAGYDRDRFHDLMVETGERMRLSREGFGERD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences